AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG031342

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031342 MtrunA17_Chr3g0078761 71.333 150 41 1 106 253 302 451 4.49e-65 214
MsaG031342 MtrunA17_Chr5g0446651 70.667 150 42 1 106 253 308 457 3.71e-63 209
MsaG031342 MtrunA17_Chr3g0102451 49.405 168 74 4 95 254 261 425 8.25e-41 148
MsaG031342 MtrunA17_Chr5g0433941 41.250 160 90 3 87 242 298 457 1.03e-27 111
MsaG031342 MtrunA17_Chr3g0112111 34.463 177 100 7 84 254 281 447 2.59e-20 90.1
MsaG031342 MtrunA17_Chr7g0239211 36.313 179 105 6 80 254 268 441 8.44e-20 88.6
MsaG031342 MtrunA17_Chr7g0239311 37.805 164 93 6 95 254 281 439 1.52e-19 87.8
MsaG031342 MtrunA17_Chr4g0058561 41.379 116 62 4 142 254 341 453 2.46e-19 87.4
MsaG031342 MtrunA17_Chr7g0239171 36.257 171 100 6 88 254 267 432 3.23e-19 87.0
MsaG031342 MtrunA17_Chr7g0239221 36.313 179 105 6 80 254 270 443 4.62e-19 86.7
MsaG031342 MtrunA17_Chr7g0239181 38.462 143 80 5 115 254 312 449 9.40e-19 85.5
MsaG031342 MtrunA17_Chr7g0239261 37.195 164 94 6 95 254 279 437 2.28e-18 84.3
MsaG031342 MtrunA17_Chr7g0239191 36.111 180 104 7 80 254 299 472 3.32e-18 84.0
MsaG031342 MtrunA17_Chr1g0172951 37.222 180 102 7 80 254 268 441 5.39e-18 83.2
MsaG031342 MtrunA17_Chr1g0170201 33.333 219 133 7 36 243 231 447 1.43e-17 82.0
MsaG031342 MtrunA17_Chr8g0366931 41.905 105 58 2 140 241 9 113 1.44e-17 80.9
MsaG031342 MtrunA17_Chr7g0239331 42.241 116 62 4 142 254 326 439 1.44e-17 82.0
MsaG031342 MtrunA17_Chr8g0366981 41.176 119 60 4 140 253 285 398 1.58e-17 82.0
MsaG031342 MtrunA17_Chr7g0239381 36.250 160 88 7 99 254 292 441 2.13e-17 81.6
MsaG031342 MtrunA17_Chr7g0239321 31.606 193 117 7 66 254 257 438 2.97e-17 81.3
MsaG031342 MtrunA17_Chr7g0274651 34.302 172 98 6 92 252 298 465 4.78e-17 80.5
MsaG031342 MtrunA17_Chr5g0414561 38.889 144 77 6 115 254 308 444 9.88e-17 79.7
MsaG031342 MtrunA17_Chr1g0175411 39.167 120 65 3 141 252 314 433 1.16e-16 79.3
MsaG031342 MtrunA17_Chr1g0206211 35.398 113 70 2 144 254 15 126 1.52e-16 75.9
MsaG031342 MtrunA17_Chr2g0280701 30.857 175 106 6 87 252 429 597 2.28e-16 78.6
MsaG031342 MtrunA17_Chr1g0175421 38.333 120 66 3 141 252 112 231 2.41e-16 78.2
MsaG031342 MtrunA17_Chr8g0366971 40.000 130 68 4 129 253 48 172 3.26e-16 77.4
MsaG031342 MtrunA17_Chr7g0239371 34.731 167 95 8 95 254 278 437 3.43e-16 78.2
MsaG031342 MtrunA17_Chr1g0175451 36.975 119 68 3 141 252 312 430 5.03e-16 77.4
MsaG031342 MtrunA17_Chr1g0202201 35.714 154 88 5 110 254 292 443 5.08e-16 77.4
MsaG031342 MtrunA17_Chr7g0236571 38.182 110 65 2 145 252 328 436 6.04e-16 77.4
MsaG031342 MtrunA17_Chr7g0236651 37.838 111 66 2 144 252 473 582 6.83e-16 77.4
MsaG031342 MtrunA17_Chr4g0049611 38.655 119 65 4 139 253 325 439 1.45e-15 76.3
MsaG031342 MtrunA17_Chr4g0049601 28.736 174 112 4 89 253 285 455 1.64e-15 76.3
MsaG031342 MtrunA17_Chr7g0236561 37.838 111 66 2 145 253 494 603 2.04e-15 75.9
MsaG031342 MtrunA17_Chr8g0340071 37.273 110 66 2 145 252 491 599 2.06e-15 75.9
MsaG031342 MtrunA17_Chr4g0049581 39.623 106 61 2 140 242 334 439 2.24e-15 75.9
MsaG031342 MtrunA17_Chr8g0340111 40.541 111 61 4 145 252 493 601 2.81e-15 75.5
MsaG031342 MtrunA17_Chr7g0236551 36.937 111 67 2 144 252 476 585 2.84e-15 75.5
MsaG031342 MtrunA17_Chr8g0376131 36.364 132 80 2 125 252 18 149 2.92e-15 74.7
MsaG031342 MtrunA17_Chr6g0475091 29.940 167 108 4 92 252 515 678 3.54e-15 75.1
MsaG031342 MtrunA17_Chr1g0206231 34.513 113 71 2 144 254 334 445 4.03e-15 74.7
MsaG031342 MtrunA17_Chr8g0340091 37.273 110 66 2 145 252 520 628 4.04e-15 75.1
MsaG031342 MtrunA17_Chr5g0428101 39.286 112 63 4 145 253 490 599 4.46e-15 74.7
MsaG031342 MtrunA17_Chr8g0340081 37.963 108 64 2 149 254 499 605 4.96e-15 74.7
MsaG031342 MtrunA17_Chr7g0236531 36.937 111 67 2 144 252 26 135 6.38e-15 73.6
MsaG031342 MtrunA17_Chr7g0236691 37.273 110 66 2 145 252 489 597 9.61e-15 73.9
MsaG031342 MtrunA17_Chr7g0239201 39.450 109 63 3 141 246 27 135 1.01e-14 69.3
MsaG031342 MtrunA17_Chr7g0233091 40.833 120 63 4 142 254 106 224 1.17e-14 73.6
MsaG031342 MtrunA17_Chr6g0474901 30.460 174 112 5 85 252 493 663 1.28e-14 73.6
MsaG031342 MtrunA17_Chr7g0236231 36.111 108 66 2 149 254 511 617 1.49e-14 73.2
MsaG031342 MtrunA17_Chr7g0236341 37.273 110 66 2 145 252 507 615 1.61e-14 73.2
MsaG031342 MtrunA17_Chr8g0361611 31.892 185 115 5 73 254 370 546 1.63e-14 73.2
MsaG031342 MtrunA17_Chr6g0474811 30.682 176 111 5 85 254 502 672 1.88e-14 73.2
MsaG031342 MtrunA17_Chr1g0206351 37.719 114 66 4 144 254 341 452 1.91e-14 72.8
MsaG031342 MtrunA17_Chr7g0236641 38.739 111 63 4 145 252 514 622 2.27e-14 72.8
MsaG031342 MtrunA17_Chr7g0274661 32.903 155 83 6 112 252 321 468 2.62e-14 72.4
MsaG031342 MtrunA17_Chr8g0366991 28.788 198 98 4 87 241 361 558 3.40e-14 72.4
MsaG031342 MtrunA17_Chr8g0347571 35.398 113 70 2 142 252 556 667 3.74e-14 72.0
MsaG031342 MtrunA17_Chr8g0340051 37.273 110 66 2 145 252 17 125 3.79e-14 71.2
MsaG031342 MtrunA17_Chr4g0042441 35.849 106 64 3 150 252 493 597 4.04e-14 72.0
MsaG031342 MtrunA17_Chr7g0239361 40.000 115 65 4 143 254 343 456 4.17e-14 72.0
MsaG031342 MtrunA17_Chr7g0236471 36.937 111 67 2 144 252 328 437 4.38e-14 71.6
MsaG031342 MtrunA17_Chr8g0367071 35.106 188 96 7 89 253 268 452 5.15e-14 71.6
MsaG031342 MtrunA17_Chr2g0281241 30.719 153 99 4 102 252 14 161 5.62e-14 70.5
MsaG031342 MtrunA17_Chr6g0475001 30.000 180 117 5 79 252 493 669 6.08e-14 71.2
MsaG031342 MtrunA17_Chr6g0474861 33.628 113 72 2 142 252 272 383 6.30e-14 71.2
MsaG031342 MtrunA17_Chr6g0474871 34.513 113 71 2 142 252 551 662 8.47e-14 71.2
MsaG031342 MtrunA17_Chr6g0475111 34.783 115 72 2 142 254 573 686 8.52e-14 71.2
MsaG031342 MtrunA17_Chr7g0274261 36.522 115 69 3 143 254 513 626 9.07e-14 70.9
MsaG031342 MtrunA17_Chr2g0286281 38.182 110 63 3 148 253 80 188 1.17e-13 70.5
MsaG031342 MtrunA17_Chr4g0048701 36.364 99 61 1 145 241 35 133 1.24e-13 66.6
MsaG031342 MtrunA17_Chr5g0420151 37.069 116 68 3 144 254 507 622 1.24e-13 70.5
MsaG031342 MtrunA17_Chr4g0055011 37.838 111 64 4 145 252 60 168 1.46e-13 69.7
MsaG031342 MtrunA17_Chr4g0066761 32.331 133 85 3 126 253 39 171 1.61e-13 69.7
MsaG031342 MtrunA17_Chr6g0455651 41.071 112 57 5 144 252 105 210 1.97e-13 69.7
MsaG031342 MtrunA17_Chr8g0379931 37.500 104 61 3 143 243 696 798 2.01e-13 70.1
MsaG031342 MtrunA17_Chr7g0236511 36.364 110 67 2 144 251 489 597 2.11e-13 69.7
MsaG031342 MtrunA17_Chr1g0190581 36.522 115 69 3 143 254 508 621 2.15e-13 69.7
MsaG031342 MtrunA17_Chr2g0280791 32.203 118 76 3 145 260 510 625 2.50e-13 69.7
MsaG031342 MtrunA17_Chr4g0048661 36.190 105 64 2 152 254 33 136 2.58e-13 68.9
MsaG031342 MtrunA17_Chr4g0049561 33.333 117 72 3 140 253 331 444 2.84e-13 69.3
MsaG031342 MtrunA17_Chr7g0236201 35.135 111 67 4 145 252 459 567 3.34e-13 69.3
MsaG031342 MtrunA17_Chr7g0236161 35.135 111 67 4 145 252 459 567 3.39e-13 69.3
MsaG031342 MtrunA17_Chr7g0236121 35.135 111 67 4 145 252 493 601 3.43e-13 69.3
MsaG031342 MtrunA17_Chr4g0042361 36.607 112 68 2 145 254 528 638 4.11e-13 68.9
MsaG031342 MtrunA17_Chr2g0280831 35.294 119 71 5 145 260 84 199 4.46e-13 68.6
MsaG031342 MtrunA17_Chr3g0084421 34.821 112 70 2 145 254 451 561 4.57e-13 68.9
MsaG031342 MtrunA17_Chr5g0443691 36.607 112 67 3 145 252 87 198 4.92e-13 68.2
MsaG031342 MtrunA17_Chr1g0150011 36.842 114 66 3 142 252 167 277 5.06e-13 68.6
MsaG031342 MtrunA17_Chr1g0205771 31.953 169 103 7 95 254 277 442 5.92e-13 68.6
MsaG031342 MtrunA17_Chr3g0084431 33.929 112 71 2 145 254 483 593 6.63e-13 68.6
MsaG031342 MtrunA17_Chr4g0042341 36.607 112 68 2 145 254 512 622 6.94e-13 68.2
MsaG031342 MtrunA17_Chr8g0342071 30.573 157 103 3 99 253 396 548 7.70e-13 68.2
MsaG031342 MtrunA17_Chr3g0084661 33.036 112 73 1 145 254 21 132 9.16e-13 67.4
MsaG031342 MtrunA17_Chr2g0315151 33.333 111 70 3 145 252 654 763 9.58e-13 68.2
MsaG031342 MtrunA17_Chr4g0049551 32.386 176 106 4 88 253 285 457 9.66e-13 67.8
MsaG031342 MtrunA17_Chr1g0165521 33.974 156 91 6 102 254 413 559 1.08e-12 67.8
MsaG031342 MtrunA17_Chr2g0280781 28.144 167 105 6 100 254 446 609 1.17e-12 67.8
MsaG031342 MtrunA17_Chr8g0361301 36.538 104 63 2 153 254 503 605 1.18e-12 67.8
MsaG031342 MtrunA17_Chr8g0361261 36.538 104 63 2 153 254 534 636 1.31e-12 67.4
MsaG031342 MtrunA17_Chr2g0314911 30.481 187 106 6 78 253 587 760 1.38e-12 67.4
MsaG031342 MtrunA17_Chr2g0324471 32.738 168 101 7 92 254 307 467 1.40e-12 67.4
MsaG031342 MtrunA17_Chr3g0084411 33.929 112 71 2 145 254 488 598 1.44e-12 67.4
MsaG031342 MtrunA17_Chr5g0428111 38.393 112 64 4 145 253 492 601 1.44e-12 67.4
MsaG031342 MtrunA17_Chr4g0061081 41.237 97 53 3 149 242 519 614 1.54e-12 67.4
MsaG031342 MtrunA17_Chr2g0280771 37.838 111 64 4 145 252 471 579 1.55e-12 67.0
MsaG031342 MtrunA17_Chr3g0093161 34.234 111 70 2 145 253 486 595 1.57e-12 67.4
MsaG031342 MtrunA17_Chr4g0048641 38.000 100 60 1 145 242 476 575 1.63e-12 67.4
MsaG031342 MtrunA17_Chr6g0455321 35.652 115 69 3 143 254 521 633 1.71e-12 67.0
MsaG031342 MtrunA17_Chr2g0314961 28.652 178 109 4 86 253 85 254 1.75e-12 66.6
MsaG031342 MtrunA17_Chr4g0048791 33.929 112 71 2 145 254 521 631 1.78e-12 67.0
MsaG031342 MtrunA17_Chr3g0108361 38.889 108 59 4 143 244 608 714 1.81e-12 67.0
MsaG031342 MtrunA17_Chr3g0078551 34.513 113 70 3 145 254 512 623 1.95e-12 67.0
MsaG031342 MtrunA17_Chr6g0452761 35.246 122 67 3 135 244 111 232 1.99e-12 66.6
MsaG031342 MtrunA17_Chr2g0277731 29.557 203 97 9 88 252 219 413 2.01e-12 67.0
MsaG031342 MtrunA17_Chr6g0467301 35.345 116 69 4 140 252 477 589 2.06e-12 67.0
MsaG031342 MtrunA17_Chr1g0206361 32.222 180 98 8 92 253 268 441 2.27e-12 66.6
MsaG031342 MtrunA17_Chr3g0143961 37.168 113 65 4 145 253 56 166 2.50e-12 66.2
MsaG031342 MtrunA17_Chr7g0216551 35.772 123 65 4 143 253 109 229 2.51e-12 66.2
MsaG031342 MtrunA17_Chr4g0048731 33.645 107 69 1 145 249 35 141 2.54e-12 65.9
MsaG031342 MtrunA17_Chr8g0354311 38.144 97 56 3 150 243 32 127 2.97e-12 62.4
MsaG031342 MtrunA17_Chr8g0358081 37.931 87 52 1 153 237 458 544 3.42e-12 66.2
MsaG031342 MtrunA17_Chr1g0206421 30.769 143 89 4 115 252 188 325 3.44e-12 66.2
MsaG031342 MtrunA17_Chr7g0251001 32.886 149 90 5 100 242 1 145 4.57e-12 65.5
MsaG031342 MtrunA17_Chr5g0393981 30.435 161 103 4 101 254 337 495 4.75e-12 65.9
MsaG031342 MtrunA17_Chr8g0361251 33.036 112 72 2 145 254 495 605 4.92e-12 65.9
MsaG031342 MtrunA17_Chr4g0048761 37.374 99 60 1 145 241 523 621 5.21e-12 65.5
MsaG031342 MtrunA17_Chr7g0221711 33.333 135 85 4 110 240 574 707 5.31e-12 65.9
MsaG031342 MtrunA17_Chr5g0407721 36.441 118 71 3 140 253 346 463 5.76e-12 65.5
MsaG031342 MtrunA17_Chr6g0475201 28.324 173 118 3 85 252 500 671 6.70e-12 65.5
MsaG031342 MtrunA17_Chr1g0160921 37.255 102 62 1 143 242 38 139 6.78e-12 65.1
MsaG031342 MtrunA17_Chr3g0078531 28.409 176 103 6 92 252 457 624 6.79e-12 65.5
MsaG031342 MtrunA17_Chr7g0238671 32.520 123 71 3 143 253 59 181 8.08e-12 64.7
MsaG031342 MtrunA17_Chr3g0098791 33.621 116 68 2 145 258 491 599 8.82e-12 65.1
MsaG031342 MtrunA17_Chr2g0314991 31.973 147 82 5 118 253 170 309 8.85e-12 65.1
MsaG031342 MtrunA17_Chr2g0314991 31.757 148 83 5 118 254 1136 1276 3.70e-11 63.2
MsaG031342 MtrunA17_Chr3g0108351 40.206 97 54 3 143 236 606 701 9.28e-12 65.1
MsaG031342 MtrunA17_Chr5g0434141 35.135 111 65 4 150 254 585 694 1.01e-11 65.1
MsaG031342 MtrunA17_Chr3g0111581 33.058 121 67 4 145 252 57 176 1.04e-11 64.3
MsaG031342 MtrunA17_Chr1g0206391 36.607 112 66 4 144 252 28 137 1.06e-11 64.3
MsaG031342 MtrunA17_Chr4g0048741 35.514 107 67 1 145 249 521 627 1.07e-11 64.7
MsaG031342 MtrunA17_Chr8g0352381 35.593 118 64 5 143 254 517 628 1.13e-11 64.7
MsaG031342 MtrunA17_Chr2g0280801 33.613 119 73 5 145 260 516 631 1.14e-11 64.7
MsaG031342 MtrunA17_Chr7g0251061 31.765 170 98 5 88 242 268 434 1.23e-11 64.7
MsaG031342 MtrunA17_Chr2g0318191 36.842 114 67 3 142 253 2 112 1.35e-11 62.4
MsaG031342 MtrunA17_Chr3g0084681 32.143 112 73 2 145 254 453 563 1.39e-11 64.3
MsaG031342 MtrunA17_Chr2g0299301 34.454 119 74 3 138 253 1041 1158 1.40e-11 64.7
MsaG031342 MtrunA17_Chr1g0206291 33.628 113 71 2 144 254 341 451 1.43e-11 64.3
MsaG031342 MtrunA17_Chr2g0314901 35.652 115 70 3 142 253 654 767 1.47e-11 64.3
MsaG031342 MtrunA17_Chr3g0125471 35.135 111 67 4 145 252 349 457 1.50e-11 64.3
MsaG031342 MtrunA17_Chr7g0248881 36.036 111 66 4 145 252 343 451 1.67e-11 64.3
MsaG031342 MtrunA17_Chr3g0078541 35.135 111 68 3 145 252 518 627 1.68e-11 64.3
MsaG031342 MtrunA17_Chr3g0084491 33.036 112 72 2 145 254 495 605 1.82e-11 63.9
MsaG031342 MtrunA17_Chr1g0181821 37.168 113 66 3 145 253 62 173 1.82e-11 63.5
MsaG031342 MtrunA17_Chr2g0284101 30.857 175 114 5 86 254 225 398 1.83e-11 63.9
MsaG031342 MtrunA17_Chr4g0025961 29.167 192 121 6 75 254 437 625 1.83e-11 63.9
MsaG031342 MtrunA17_Chr3g0084621 31.538 130 79 3 115 241 468 590 1.89e-11 63.9
MsaG031342 MtrunA17_Chr5g0416011 35.714 112 60 3 143 242 122 233 2.13e-11 63.5
MsaG031342 MtrunA17_Chr8g0359641 35.577 104 63 3 145 245 651 753 2.31e-11 63.9
MsaG031342 MtrunA17_Chr8g0359651 35.577 104 63 3 145 245 651 753 2.33e-11 63.9
MsaG031342 MtrunA17_Chr6g0453571 34.343 99 63 1 145 241 329 427 2.33e-11 63.5
MsaG031342 MtrunA17_Chr2g0315061 33.929 112 70 3 145 253 25 135 2.57e-11 63.2
MsaG031342 MtrunA17_Chr2g0324171 37.931 116 66 4 142 254 331 443 2.71e-11 63.5
MsaG031342 MtrunA17_Chr8g0348661 36.364 110 62 4 145 252 476 579 2.74e-11 63.5
MsaG031342 MtrunA17_Chr8g0354421 36.190 105 64 2 150 252 357 460 2.83e-11 63.5
MsaG031342 MtrunA17_Chr4g0042421 34.259 108 66 4 150 254 498 603 3.08e-11 63.2
MsaG031342 MtrunA17_Chr5g0438071 32.143 140 89 4 118 252 619 757 3.12e-11 63.5
MsaG031342 MtrunA17_Chr8g0358141 33.333 93 60 1 153 243 63 155 3.18e-11 62.8
MsaG031342 MtrunA17_Chr1g0191101 32.653 98 63 2 157 252 3 99 3.26e-11 58.9
MsaG031342 MtrunA17_Chr8g0358161 32.632 95 62 1 145 237 35 129 3.28e-11 62.8
MsaG031342 MtrunA17_Chr2g0318171 31.333 150 93 4 111 253 432 578 3.33e-11 63.2
MsaG031342 MtrunA17_Chr8g0361161 37.273 110 62 4 150 253 34 142 3.35e-11 62.8
MsaG031342 MtrunA17_Chr3g0084451 28.000 175 110 4 95 254 432 605 3.47e-11 63.2
MsaG031342 MtrunA17_Chr8g0358031 32.692 104 67 2 153 254 476 578 3.57e-11 63.2
MsaG031342 MtrunA17_Chr2g0315081 28.889 180 116 5 78 252 579 751 3.72e-11 63.2
MsaG031342 MtrunA17_Chr5g0416311 33.582 134 73 5 134 253 51 182 3.73e-11 62.8
MsaG031342 MtrunA17_Chr8g0362661 34.821 112 61 3 143 242 120 231 3.99e-11 62.8
MsaG031342 MtrunA17_Chr4g0048681 36.066 122 70 4 145 259 273 393 4.01e-11 62.8
MsaG031342 MtrunA17_Chr8g0359691 30.631 111 73 3 145 252 652 761 4.20e-11 63.2
MsaG031342 MtrunA17_Chr7g0245221 38.614 101 58 3 143 240 607 706 5.06e-11 62.8
MsaG031342 MtrunA17_Chr8g0358121 34.483 87 55 1 153 237 459 545 5.09e-11 62.8
MsaG031342 MtrunA17_Chr8g0361431 35.135 111 69 2 145 253 473 582 5.12e-11 62.8
MsaG031342 MtrunA17_Chr8g0361441 36.111 108 64 4 150 254 500 605 5.35e-11 62.8
MsaG031342 MtrunA17_Chr8g0357761 32.692 104 67 2 153 254 477 579 5.36e-11 62.8
MsaG031342 MtrunA17_Chr5g0394021 38.235 102 59 3 145 243 312 412 5.53e-11 62.4
MsaG031342 MtrunA17_Chr4g0065541 36.036 111 66 4 145 252 427 535 5.95e-11 62.4
MsaG031342 MtrunA17_Chr8g0380681 28.458 253 133 12 40 254 177 419 6.35e-11 62.4
MsaG031342 MtrunA17_Chr5g0394001 34.234 111 70 2 144 252 317 426 6.60e-11 62.4
MsaG031342 MtrunA17_Chr7g0219601 33.594 128 73 5 133 254 495 616 6.65e-11 62.4
MsaG031342 MtrunA17_Chr8g0354351 38.679 106 60 4 150 252 327 430 6.83e-11 62.4
MsaG031342 MtrunA17_Chr5g0422921 34.234 111 68 4 145 252 487 595 7.10e-11 62.4
MsaG031342 MtrunA17_Chr3g0081011 38.679 106 60 4 150 252 333 436 7.10e-11 62.4
MsaG031342 MtrunA17_Chr8g0357801 33.684 95 61 1 145 237 462 556 7.23e-11 62.0
MsaG031342 MtrunA17_Chr1g0206451 31.818 132 85 4 126 254 342 471 7.63e-11 62.0
MsaG031342 MtrunA17_Chr8g0357711 32.692 104 67 2 153 254 474 576 7.91e-11 62.0
MsaG031342 MtrunA17_Chr1g0206531 36.607 112 66 4 144 252 325 434 7.91e-11 62.0
MsaG031342 MtrunA17_Chr3g0081061 37.209 86 52 1 153 236 34 119 8.59e-11 58.5
MsaG031342 MtrunA17_Chr3g0082941 38.318 107 61 4 150 253 167 271 8.60e-11 61.6
MsaG031342 MtrunA17_Chr3g0084691 34.545 110 64 2 145 252 516 619 9.95e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG031342 AT5G55830.1 47.586 145 70 4 114 254 324 466 3.42e-32 125
MsaG031342 AT5G03140.1 38.182 165 89 4 91 244 301 463 8.11e-23 97.8
MsaG031342 AT3G53380.1 36.709 158 96 3 88 242 308 464 1.51e-21 94.4
MsaG031342 AT3G59730.1 30.631 222 140 7 43 254 220 437 2.25e-21 93.6
MsaG031342 AT4G29050.1 36.628 172 99 5 87 254 277 442 1.74e-19 88.2
MsaG031342 AT4G29050.2 36.628 172 99 5 87 254 291 456 2.10e-19 87.8
MsaG031342 AT3G59700.1 35.714 168 99 5 91 254 275 437 4.62e-19 87.0
MsaG031342 AT5G65600.1 33.526 173 99 5 94 253 278 447 1.02e-18 85.9
MsaG031342 AT3G55550.1 41.481 135 71 6 126 254 313 445 1.21e-18 85.9
MsaG031342 AT3G59750.1 32.828 198 126 5 62 254 207 402 1.69e-18 85.1
MsaG031342 AT3G59740.1 33.735 166 100 5 95 254 274 435 1.83e-18 85.1
MsaG031342 AT5G10530.1 32.335 167 100 5 93 246 262 428 1.87e-18 85.1
MsaG031342 AT1G70130.1 34.731 167 99 5 92 254 272 432 3.40e-18 84.3
MsaG031342 AT1G15530.1 32.044 181 106 6 75 245 278 451 3.10e-17 81.6
MsaG031342 AT4G04540.3 32.967 182 103 7 85 252 273 449 7.75e-17 80.1
MsaG031342 AT5G01560.1 36.585 123 74 3 135 253 341 463 7.78e-17 80.5
MsaG031342 AT4G04540.2 32.967 182 103 7 85 252 273 449 7.93e-17 80.1
MsaG031342 AT4G04540.1 32.967 182 103 7 85 252 273 449 1.02e-16 80.1
MsaG031342 AT5G59270.2 40.517 116 64 4 142 254 353 466 1.30e-16 79.7
MsaG031342 AT5G01550.1 37.097 124 73 4 135 253 357 480 1.34e-16 79.7
MsaG031342 AT2G43690.1 35.928 167 100 5 91 254 272 434 1.41e-16 79.7
MsaG031342 AT2G43690.3 35.928 167 100 5 91 254 272 434 1.41e-16 79.7
MsaG031342 AT2G43690.2 35.928 167 100 5 91 254 236 398 1.42e-16 79.7
MsaG031342 AT2G43700.3 35.366 164 93 7 97 254 253 409 1.45e-16 79.7
MsaG031342 AT2G43700.5 35.366 164 93 7 97 254 253 409 1.45e-16 79.7
MsaG031342 AT2G43700.2 35.366 164 93 7 97 254 253 409 1.45e-16 79.7
MsaG031342 AT2G43700.4 35.366 164 93 7 97 254 253 409 1.45e-16 79.7
MsaG031342 AT2G43700.1 35.366 164 93 7 97 254 277 433 1.52e-16 79.3
MsaG031342 AT5G59270.3 40.517 116 64 4 142 254 337 450 1.63e-16 79.3
MsaG031342 AT5G59270.1 40.517 116 64 4 142 254 334 447 1.77e-16 79.3
MsaG031342 AT1G61860.1 39.130 115 67 2 141 252 69 183 1.82e-16 78.6
MsaG031342 AT4G02420.1 40.909 110 60 4 148 254 341 448 3.72e-16 78.6
MsaG031342 AT3G45860.1 38.636 132 74 5 127 254 321 449 6.20e-16 77.8
MsaG031342 AT5G24080.2 32.298 161 94 7 100 252 474 627 7.36e-16 77.8
MsaG031342 AT5G24080.3 32.298 161 94 7 100 252 347 500 7.51e-16 77.4
MsaG031342 AT5G24080.1 32.298 161 94 7 100 252 347 500 7.51e-16 77.4
MsaG031342 AT2G37710.1 39.474 114 64 4 144 254 334 445 1.23e-15 77.0
MsaG031342 AT3G53810.1 40.909 110 60 4 148 254 338 445 2.34e-15 75.9
MsaG031342 AT4G04570.3 35.882 170 97 6 93 252 113 280 2.94e-15 75.1
MsaG031342 AT5G59260.1 38.793 116 66 4 142 254 340 453 3.10e-15 75.5
MsaG031342 AT4G23220.1 32.911 158 95 6 100 254 285 434 3.25e-15 75.5
MsaG031342 AT4G04540.4 41.964 112 60 4 144 252 311 420 3.54e-15 75.5
MsaG031342 AT4G02410.1 40.000 110 61 4 148 254 346 453 4.94e-15 75.1
MsaG031342 AT5G06740.1 37.607 117 68 3 139 252 312 426 5.78e-15 74.7
MsaG031342 AT4G04570.2 35.882 170 97 6 93 252 277 444 5.89e-15 74.7
MsaG031342 AT5G06740.2 37.607 117 68 3 139 252 324 438 6.04e-15 74.7
MsaG031342 AT3G08870.2 35.246 122 76 2 135 253 367 488 6.31e-15 74.7
MsaG031342 AT4G04570.1 35.882 170 97 6 93 252 277 444 7.45e-15 74.3
MsaG031342 AT3G08870.1 35.246 122 76 2 135 253 346 467 7.46e-15 74.7
MsaG031342 AT1G79680.1 39.823 113 64 3 143 252 419 530 8.32e-15 74.3
MsaG031342 AT4G23280.2 37.500 128 73 5 131 254 316 440 1.84e-14 73.2
MsaG031342 AT4G04500.1 40.157 127 66 5 130 253 323 442 2.07e-14 73.2
MsaG031342 AT2G32800.1 38.400 125 68 4 139 254 97 221 2.18e-14 73.2
MsaG031342 AT4G11480.2 42.857 112 59 4 144 252 311 420 2.29e-14 72.8
MsaG031342 AT4G04500.2 40.157 127 66 5 130 253 323 442 2.53e-14 72.8
MsaG031342 AT4G04500.3 40.157 127 66 5 130 253 323 442 2.53e-14 72.8
MsaG031342 AT4G23240.1 32.086 187 114 6 67 249 252 429 2.74e-14 72.8
MsaG031342 AT4G11480.4 42.857 112 59 4 144 252 308 417 2.85e-14 72.8
MsaG031342 AT4G11480.3 42.857 112 59 4 144 252 311 420 2.93e-14 72.8
MsaG031342 AT1G69730.1 40.179 112 63 3 145 253 435 545 3.44e-14 72.8
MsaG031342 AT4G11470.1 41.071 112 61 4 144 252 326 435 4.18e-14 72.4
MsaG031342 AT4G11470.2 41.071 112 61 4 144 252 331 440 4.23e-14 72.4
MsaG031342 AT1G16110.1 32.620 187 102 7 81 245 338 522 4.48e-14 72.0
MsaG031342 AT4G23280.1 40.000 115 62 5 144 254 331 442 4.50e-14 72.0
MsaG031342 AT4G23150.1 37.719 114 66 4 144 254 323 434 4.74e-14 72.0
MsaG031342 AT1G16130.1 40.566 106 59 3 143 245 402 506 5.69e-14 72.0
MsaG031342 AT4G23200.2 38.261 115 66 4 143 254 322 434 7.98e-14 71.2
MsaG031342 AT1G16150.1 42.157 102 55 3 145 243 412 512 8.16e-14 71.6
MsaG031342 AT5G13160.1 39.091 110 62 3 148 253 77 185 8.61e-14 71.2
MsaG031342 AT4G23180.2 37.719 114 66 4 144 254 335 446 9.52e-14 71.2
MsaG031342 AT4G23200.1 38.261 115 66 4 143 254 322 434 1.03e-13 71.2
MsaG031342 AT4G23270.3 38.596 114 65 4 144 254 313 424 1.14e-13 70.9
MsaG031342 AT1G61400.1 29.167 168 102 4 86 241 424 586 1.32e-13 70.9
MsaG031342 AT4G23270.2 38.596 114 65 4 144 254 313 424 1.40e-13 70.9
MsaG031342 AT4G23270.1 38.596 114 65 4 144 254 313 424 1.40e-13 70.9
MsaG031342 AT4G23180.3 37.719 114 66 4 144 254 335 446 1.45e-13 70.5
MsaG031342 AT1G61400.2 29.167 168 102 4 86 241 424 586 1.53e-13 70.9
MsaG031342 AT5G39000.1 37.719 114 67 3 143 252 504 617 1.58e-13 70.9
MsaG031342 AT4G23180.1 37.719 114 66 4 144 254 335 446 1.63e-13 70.5
MsaG031342 AT3G45430.2 33.735 166 96 7 95 254 284 441 1.65e-13 70.5
MsaG031342 AT3G45430.3 33.735 166 96 7 95 254 284 441 1.65e-13 70.5
MsaG031342 AT3G45430.1 33.735 166 96 7 95 254 284 441 1.65e-13 70.5
MsaG031342 AT4G11480.1 46.392 97 48 3 144 237 308 403 1.79e-13 70.5
MsaG031342 AT4G04510.1 41.593 113 61 4 144 253 326 436 2.00e-13 70.1
MsaG031342 AT4G04510.2 41.593 113 61 4 144 253 328 438 2.06e-13 70.1
MsaG031342 AT4G23320.2 39.474 114 64 4 144 254 170 281 2.46e-13 69.7
MsaG031342 AT4G23320.1 39.474 114 64 4 144 254 170 281 2.46e-13 69.7
MsaG031342 AT4G23320.3 39.474 114 64 4 144 254 191 302 2.75e-13 69.7
MsaG031342 AT4G31110.2 37.097 124 74 3 133 253 407 529 2.99e-13 69.7
MsaG031342 AT4G31110.1 37.097 124 74 3 133 253 429 551 3.04e-13 69.7
MsaG031342 AT1G19390.1 41.509 106 58 3 143 245 437 541 3.18e-13 69.7
MsaG031342 AT5G18610.1 39.091 110 62 3 148 253 74 182 3.21e-13 69.7
MsaG031342 AT5G18610.2 39.091 110 62 3 148 253 74 182 3.21e-13 69.7
MsaG031342 AT5G18610.3 39.091 110 62 3 148 253 74 182 3.21e-13 69.7
MsaG031342 AT5G38990.1 36.842 114 68 3 143 252 511 624 3.36e-13 69.7
MsaG031342 AT4G23190.2 26.794 209 141 6 54 254 244 448 3.50e-13 69.3
MsaG031342 AT5G42120.1 33.136 169 90 6 99 254 315 473 3.64e-13 69.7
MsaG031342 AT4G23190.3 26.794 209 141 6 54 254 166 370 4.05e-13 69.3
MsaG031342 AT4G23190.4 26.794 209 141 6 54 254 166 370 4.05e-13 69.3
MsaG031342 AT4G23190.1 26.794 209 141 6 54 254 244 448 4.09e-13 69.3
MsaG031342 AT1G53420.1 30.178 169 109 5 87 252 559 721 5.31e-13 69.3
MsaG031342 AT1G61380.1 25.281 178 116 5 86 254 417 586 5.33e-13 68.9
MsaG031342 AT4G39110.1 35.172 145 80 6 116 254 487 623 5.66e-13 68.9
MsaG031342 AT4G11460.3 37.719 114 66 4 144 254 333 444 7.26e-13 68.6
MsaG031342 AT4G11460.2 37.719 114 66 4 144 254 258 369 8.09e-13 68.6
MsaG031342 AT4G11530.1 37.719 114 66 4 144 254 339 450 1.08e-12 68.2
MsaG031342 AT1G61440.1 30.719 153 97 4 95 241 415 564 1.10e-12 68.2
MsaG031342 AT1G11340.3 37.963 108 63 3 145 249 571 677 1.73e-12 67.4
MsaG031342 AT4G11490.1 35.965 114 68 4 144 254 308 419 1.75e-12 67.4
MsaG031342 AT1G61440.3 31.013 158 95 5 95 241 415 569 1.78e-12 67.4
MsaG031342 AT4G23290.2 36.283 113 69 2 144 254 350 461 1.81e-12 67.4
MsaG031342 AT1G11340.2 37.963 108 63 3 145 249 571 677 1.91e-12 67.4
MsaG031342 AT1G11340.1 37.963 108 63 3 145 249 503 609 2.05e-12 67.4
MsaG031342 AT4G31100.1 36.290 124 75 3 133 253 420 542 2.27e-12 67.0
MsaG031342 AT4G23310.1 34.646 127 78 4 131 254 482 606 2.33e-12 67.0
MsaG031342 AT1G56145.3 32.174 115 74 2 142 254 569 681 2.34e-12 67.4
MsaG031342 AT1G17910.1 39.216 102 58 3 145 243 442 542 2.38e-12 67.0
MsaG031342 AT4G23290.1 36.283 113 69 2 144 254 307 418 2.39e-12 67.0
MsaG031342 AT1G56145.1 32.174 115 74 2 142 254 672 784 2.42e-12 67.0
MsaG031342 AT1G61380.2 25.281 178 116 5 86 254 270 439 2.52e-12 67.0
MsaG031342 AT4G05200.2 32.743 113 73 2 144 254 352 463 2.56e-12 67.0
MsaG031342 AT4G05200.1 32.743 113 73 2 144 254 334 445 2.68e-12 67.0
MsaG031342 AT1G70110.1 36.691 139 78 6 120 254 310 442 2.93e-12 66.6
MsaG031342 AT4G21400.3 33.113 151 89 5 108 253 303 446 3.58e-12 66.2
MsaG031342 AT4G11460.1 37.069 116 67 4 144 254 333 447 3.90e-12 66.6
MsaG031342 AT1G61500.3 26.946 167 109 5 86 242 420 583 3.96e-12 66.6
MsaG031342 AT1G61500.1 26.946 167 109 5 86 242 415 578 4.03e-12 66.6
MsaG031342 AT1G61500.2 26.946 167 109 5 86 242 397 560 4.31e-12 66.2
MsaG031342 AT3G59730.2 28.571 182 118 6 43 216 220 397 4.45e-12 65.9
MsaG031342 AT1G29730.1 37.000 100 59 3 145 241 628 726 4.54e-12 66.2
MsaG031342 AT1G29730.2 37.000 100 59 3 145 241 661 759 4.70e-12 66.2
MsaG031342 AT4G21400.2 32.450 151 90 5 108 253 303 446 5.42e-12 65.9
MsaG031342 AT4G23240.2 38.532 109 63 3 144 249 15 122 5.43e-12 65.5
MsaG031342 AT1G61480.1 26.471 170 110 3 86 241 414 582 5.68e-12 65.9
MsaG031342 AT4G23130.3 37.168 113 66 4 144 253 331 441 5.86e-12 65.9
MsaG031342 AT1G53430.2 29.452 146 95 2 110 253 587 726 5.97e-12 65.9
MsaG031342 AT4G00960.4 33.628 113 72 2 144 254 43 154 6.01e-12 64.7
MsaG031342 AT1G07650.4 30.323 155 98 6 104 253 415 564 6.27e-12 65.9
MsaG031342 AT1G53430.1 29.452 146 95 2 110 253 628 767 6.30e-12 65.9
MsaG031342 AT1G53440.1 29.114 158 108 2 100 253 608 765 6.36e-12 65.9
MsaG031342 AT4G38830.1 36.036 111 68 2 144 252 331 440 6.50e-12 65.9
MsaG031342 AT1G07650.1 30.323 155 98 6 104 253 628 777 6.51e-12 65.9
MsaG031342 AT1G07650.3 30.323 155 98 6 104 253 602 751 6.66e-12 65.9
MsaG031342 AT4G23310.2 35.156 128 76 5 131 254 442 566 6.67e-12 65.9
MsaG031342 AT1G07650.2 30.323 155 98 6 104 253 634 783 6.83e-12 65.9
MsaG031342 AT1G61610.2 36.275 102 63 1 150 249 518 619 7.15e-12 65.9
MsaG031342 AT4G23160.1 35.088 114 69 4 144 254 346 457 7.82e-12 65.5
MsaG031342 AT1G61610.1 36.275 102 63 1 150 249 518 619 8.47e-12 65.5
MsaG031342 AT1G61440.2 30.055 183 89 8 95 241 415 594 8.58e-12 65.5
MsaG031342 AT3G14840.2 35.135 111 68 3 145 252 660 769 9.10e-12 65.5
MsaG031342 AT1G56130.3 29.091 165 111 4 92 253 430 591 1.11e-11 65.1
MsaG031342 AT4G23130.1 37.168 113 66 4 144 253 327 437 1.12e-11 65.1
MsaG031342 AT4G23140.1 35.088 114 69 4 144 254 338 449 1.14e-11 65.1
MsaG031342 AT4G23130.2 37.168 113 66 4 144 253 331 441 1.14e-11 65.1
MsaG031342 AT1G56130.1 29.091 165 111 4 92 253 481 642 1.17e-11 65.1
MsaG031342 AT4G23140.2 35.088 114 69 4 144 254 338 449 1.20e-11 65.1
MsaG031342 AT4G21400.8 33.094 139 82 4 108 241 176 308 1.29e-11 64.7
MsaG031342 AT4G21400.7 33.094 139 82 4 108 241 277 409 1.36e-11 64.7
MsaG031342 AT1G70740.1 37.895 95 57 1 150 242 55 149 1.47e-11 64.3
MsaG031342 AT1G11280.1 25.581 172 109 7 86 241 433 601 1.48e-11 64.7
MsaG031342 AT1G11280.5 25.581 172 109 7 86 241 423 591 1.51e-11 64.7
MsaG031342 AT3G51550.1 33.913 115 71 3 143 254 522 634 1.55e-11 64.7
MsaG031342 AT1G61460.1 26.220 164 110 3 86 241 380 540 1.70e-11 64.7
MsaG031342 AT1G70740.2 37.895 95 57 1 150 242 43 137 1.70e-11 64.3
MsaG031342 AT1G11280.2 25.581 172 109 7 86 241 423 591 1.75e-11 64.7
MsaG031342 AT1G11330.2 33.636 110 70 2 145 252 512 620 1.81e-11 64.7
MsaG031342 AT1G29730.4 37.000 100 59 3 145 241 628 726 2.06e-11 64.3
MsaG031342 AT1G29730.3 37.000 100 59 3 145 241 661 759 2.08e-11 64.3
MsaG031342 AT4G39400.1 35.088 114 70 3 143 253 869 981 2.11e-11 64.3
MsaG031342 AT4G00960.1 33.628 113 72 2 144 254 43 154 2.16e-11 63.9
MsaG031342 AT3G09010.2 33.913 115 72 3 143 254 32 145 2.18e-11 63.5
MsaG031342 AT1G11330.3 33.636 110 70 2 145 252 512 620 2.23e-11 64.3
MsaG031342 AT1G11330.1 33.636 110 70 2 145 252 510 618 2.28e-11 64.3
MsaG031342 AT1G29720.1 34.821 112 67 4 145 253 661 769 2.54e-11 64.3
MsaG031342 AT5G15730.3 32.479 117 73 4 140 254 100 212 2.71e-11 63.5
MsaG031342 AT5G15730.2 32.479 117 73 4 140 254 100 212 2.71e-11 63.5
MsaG031342 AT1G56140.1 33.333 114 72 2 142 253 678 789 2.82e-11 63.9
MsaG031342 AT4G23260.2 37.168 113 66 4 144 253 315 425 2.86e-11 63.9
MsaG031342 AT4G23260.1 37.168 113 66 4 144 253 326 436 3.43e-11 63.5
MsaG031342 AT4G11900.10 41.489 94 51 3 153 243 533 625 3.72e-11 63.5
MsaG031342 AT4G11900.5 41.489 94 51 3 153 243 533 625 3.72e-11 63.5
MsaG031342 AT1G11280.4 26.875 160 110 6 86 241 433 589 3.86e-11 63.5
MsaG031342 AT3G16030.3 37.500 96 58 1 153 246 544 639 4.08e-11 63.5
MsaG031342 AT3G16030.8 37.500 96 58 1 153 246 544 639 4.08e-11 63.5
MsaG031342 AT3G16030.5 37.500 96 58 1 153 246 544 639 4.08e-11 63.5
MsaG031342 AT1G61420.2 25.882 170 111 4 86 241 414 582 4.15e-11 63.5
MsaG031342 AT1G61420.4 25.882 170 111 4 86 241 414 582 4.15e-11 63.5
MsaG031342 AT1G11280.3 26.875 160 110 6 86 241 423 579 4.34e-11 63.5
MsaG031342 AT5G07280.1 32.407 108 71 1 149 254 909 1016 4.46e-11 63.5
MsaG031342 AT1G61420.5 25.882 170 111 4 86 241 264 432 4.60e-11 63.2
MsaG031342 AT5G60300.3 32.500 160 94 6 100 254 291 441 5.80e-11 63.2
MsaG031342 AT4G21400.1 34.545 110 69 2 146 253 350 458 6.38e-11 62.8
MsaG031342 AT3G53840.1 34.426 122 76 3 123 241 320 440 6.47e-11 62.8
MsaG031342 AT5G60300.1 32.500 160 94 6 100 254 291 441 6.72e-11 62.8
MsaG031342 AT5G60300.2 32.500 160 94 6 100 254 291 441 6.72e-11 62.8
MsaG031342 AT4G27300.1 33.663 101 65 1 145 243 488 588 7.23e-11 62.8
MsaG031342 AT1G56130.2 29.091 165 111 4 92 253 629 790 7.55e-11 62.8
MsaG031342 AT1G61420.1 26.471 170 108 5 86 241 414 580 8.05e-11 62.4
MsaG031342 AT4G21230.1 29.240 171 117 3 87 254 262 431 8.16e-11 62.4
MsaG031342 AT5G01020.1 36.522 115 62 5 149 254 61 173 9.58e-11 62.0
MsaG031342 AT1G61420.3 26.471 170 108 5 86 241 264 430 9.80e-11 62.4

Find 38 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTCTTGTTTATGATTTC+AGG 0.128468 6:-24409533 MsaT031342.1:CDS
CGGAATTGTCCATTGATTTA+AGG 0.144179 6:-24409605 MsaT031342.1:CDS
TGATGAAACTTTGCAGTTTA+AGG 0.198804 6:-24410144 MsaT031342.1:CDS
AACAAGACTAAACTTCTTCT+TGG 0.250562 6:+24409923 None:intergenic
CCGTAACCAACAATTCTTCT+AGG 0.288996 6:+24409729 None:intergenic
GTCATTCTGAGAAGGTAAAA+TGG 0.304224 6:+24409438 None:intergenic
AACACAAATCAATTCACTAT+AGG 0.349909 6:-24410067 MsaT031342.1:CDS
CTTAAATCAATGGACAATTC+CGG 0.374658 6:+24409606 None:intergenic
ACACAAATCAATTCACTATA+GGG 0.378183 6:-24410066 MsaT031342.1:CDS
CAAGAATTCAGTTCAGTTGC+TGG 0.392317 6:-24409580 MsaT031342.1:CDS
CTCAACAATTTCCCCATCTC+AGG 0.401873 6:+24409474 None:intergenic
TTTATCTTCCTGATAATCTT+CGG 0.403973 6:+24409990 None:intergenic
ATTCTTGTGCCTTAAATCAA+TGG 0.404681 6:+24409596 None:intergenic
TTTCATCCTAGAAGAATTGT+TGG 0.425698 6:-24409735 MsaT031342.1:CDS
ACAGTTTGATCGCAGAGAAC+TGG 0.429443 6:-24409775 MsaT031342.1:CDS
ACAAGCAACAAACCAGGTTT+CGG 0.437184 6:+24409803 None:intergenic
CCTAGAAGAATTGTTGGTTA+CGG 0.439362 6:-24409729 MsaT031342.1:CDS
TTAAATCAATGGACAATTCC+GGG 0.442855 6:+24409607 None:intergenic
GAACCATCGTTGCAGTGAAA+AGG 0.466457 6:-24409665 MsaT031342.1:CDS
ATAAATGAGATAAACGTTCT+CGG 0.491590 6:-24409972 MsaT031342.1:CDS
TAAATGAGATAAACGTTCTC+GGG 0.508510 6:-24409971 MsaT031342.1:CDS
AGGTCGAGGCATTCTAATGA+AGG 0.512079 6:-24409645 MsaT031342.1:CDS
ATTCAGTTCAGTTGCTGGGT+AGG 0.520137 6:-24409575 MsaT031342.1:CDS
ATTTACAAAGAACCTGAGAT+GGG 0.521881 6:-24409486 MsaT031342.1:CDS
CATCGAACAATTCCGAAACC+TGG 0.535072 6:-24409815 MsaT031342.1:CDS
AAGAATTCAGTTCAGTTGCT+GGG 0.547293 6:-24409579 MsaT031342.1:CDS
GATTTACAAAGAACCTGAGA+TGG 0.552355 6:-24409487 MsaT031342.1:CDS
AGATGGGGAAATTGTTGAGT+TGG 0.566828 6:-24409470 MsaT031342.1:CDS
AGGGAAGACCGAGTTTCTCC+CGG 0.570730 6:-24409625 MsaT031342.1:CDS
GGACAATTCCGGGAGAAACT+CGG 0.573970 6:+24409617 None:intergenic
TCTCTGCGATCAAACTGTCT+AGG 0.580104 6:+24409780 None:intergenic
TCTCAGAATGACAACAACAT+AGG 0.589851 6:-24409427 None:intergenic
ATGTTGTTGTCATTCTGAGA+AGG 0.593530 6:+24409430 None:intergenic
GTGTGTTGAGAAAGATGAGC+TGG 0.603587 6:-24409553 MsaT031342.1:CDS
TCGTTGCAGTGAAAAGGTCG+AGG 0.620731 6:-24409659 MsaT031342.1:CDS
GGTCGAGGCATTCTAATGAA+GGG 0.626484 6:-24409644 MsaT031342.1:CDS
TCTAGGACAAGCAACAAACC+AGG 0.628340 6:+24409797 None:intergenic
TTTACAAAGAACCTGAGATG+GGG 0.693809 6:-24409485 MsaT031342.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 24409428 24410225 24409428 ID=MsaG031342
Chr6 mRNA 24409428 24410225 24409428 ID=MsaT031342.1;Parent=MsaG031342
Chr6 exon 24409428 24410225 24409428 ID=MsaT031342.1.exon1;Parent=MsaT031342.1
Chr6 CDS 24409428 24410225 24409428 ID=cds.MsaT031342.1;Parent=MsaT031342.1
Gene Sequence

>MsaT031342.1

ATGTTGAGTTTATCTTTTGTGGAGTTTTGGTATTTTGGAAAACACACTCATTTTGTGGGTGATGAAACTTTGCAGTTTAAGGTTTTTGAATCTTCGCTTTTGTTTTTTGAAAATTCAAAGGAAATTCATGTGCTCAAACACAAATCAATTCACTATAGGGATCTCATATCTTACACAAAGATATTTCAAGATTTGATTACATCGAAAAAATGGCCGAAGATTATCAGGAAGATAAATGAGATAAACGTTCTCGGGTCTCGTTCATCTTTTTCGTCTTCTGCCAAGAAGAAGTTTAGTCTTGTTGCTACTGTTCATGTTGCTTTCTATGTTGTTTTTTCTTTGTTGGGGTATTATTCTTTTTTGAAATGGAAGGGGATGAGAAAAGTGTCATCGAACAATTCCGAAACCTGGTTTGTTGCTTGTCCTAGACAGTTTGATCGCAGAGAACTGGAATCTACAACAAGAGAGTTTCATCCTAGAAGAATTGTTGGTTACGGTTCATTTTGTACTGTGTATAAAGCTTTCTCTATATTTTTTAGAACCATCGTTGCAGTGAAAAGGTCGAGGCATTCTAATGAAGGGAAGACCGAGTTTCTCCCGGAATTGTCCATTGATTTAAGGCACAAGAATTCAGTTCAGTTGCTGGGTAGGTGTGTTGAGAAAGATGAGCTGGTTCTTGTTTATGATTTCAGGCCTAATAGCAGCTTTGAAAAGATGATTTACAAAGAACCTGAGATGGGGAAATTGTTGAGTTGGTCTCAGAATCCATTTTACCTTCTCAGAATGACAACAACATAG
Protein sequence

>MsaT031342.1

MLSLSFVEFWYFGKHTHFVGDETLQFKVFESSLLFFENSKEIHVLKHKSIHYRDLISYTKIFQDLITSKKWPKIIRKINEINVLGSRSSFSSSAKKKFSLVATVHVAFYVVFSLLGYYSFLKWKGMRKVSSNNSETWFVACPRQFDRRELESTTREFHPRRIVGYGSFCTVYKAFSIFFRTIVAVKRSRHSNEGKTEFLPELSIDLRHKNSVQLLGRCVEKDELVLVYDFRPNSSFEKMIYKEPEMGKLLSWSQNPFYLLRMTTT*