AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG033181

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG033181 MtrunA17_Chr6g0472441 82.072 753 74 8 62 808 13 710 0.0 1204
MsaG033181 MtrunA17_Chr5g0420361 71.906 808 156 10 30 796 2 779 0.0 1111
MsaG033181 MtrunA17_Chr1g0183311 68.163 713 182 9 125 822 207 889 0.0 965
MsaG033181 MtrunA17_Chr1g0211711 68.474 701 168 10 126 822 407 1058 0.0 953
MsaG033181 MtrunA17_Chr5g0426961 63.821 691 183 10 130 816 209 836 0.0 839
MsaG033181 MtrunA17_Chr1g0211661 61.356 634 184 10 126 755 289 865 0.0 741
MsaG033181 MtrunA17_Chr1g0211691 62.649 589 162 9 125 703 405 945 0.0 714
MsaG033181 MtrunA17_Chr5g0448301 48.074 649 248 14 82 725 67 631 0.0 547
MsaG033181 MtrunA17_Chr4g0075261 43.516 694 315 16 132 812 235 864 1.03e-174 526
MsaG033181 MtrunA17_Chr2g0289121 44.857 700 287 18 122 812 210 819 4.02e-171 515
MsaG033181 MtrunA17_Chr7g0275771 41.440 736 335 19 144 812 218 924 1.74e-165 504
MsaG033181 MtrunA17_Chr2g0289031 50.346 433 164 9 386 812 6 393 2.45e-125 382
MsaG033181 MtrunA17_Chr1g0192011 32.571 700 368 15 139 813 341 961 1.85e-109 358
MsaG033181 MtrunA17_Chr2g0281051 32.863 709 403 19 144 817 289 959 1.90e-100 333
MsaG033181 MtrunA17_Chr1g0147021 41.632 478 220 12 136 605 940 1366 2.69e-92 318
MsaG033181 MtrunA17_Chr1g0147021 62.353 170 63 1 644 813 1528 1696 1.81e-58 217
MsaG033181 MtrunA17_Chr4g0048531 34.489 577 303 17 286 813 727 1277 2.43e-90 310
MsaG033181 MtrunA17_Chr4g0048531 41.250 80 46 1 144 223 347 425 1.94e-12 71.2
MsaG033181 MtrunA17_Chr1g0211701 76.230 122 29 0 701 822 4 125 2.01e-61 204
MsaG033181 MtrunA17_Chr8g0364421 44.649 271 97 6 178 448 10 227 3.26e-61 206
MsaG033181 MtrunA17_Chr2g0289091 72.072 111 31 0 667 777 310 420 8.02e-50 181
MsaG033181 MtrunA17_Chr2g0289091 52.414 145 64 3 462 602 20 163 1.16e-36 143
MsaG033181 MtrunA17_Chr7g0231061 54.217 166 72 2 452 613 12 177 5.39e-48 169
MsaG033181 MtrunA17_Chr8g0361381 49.474 190 85 6 384 569 26 208 3.06e-47 167
MsaG033181 MtrunA17_Chr8g0340381 55.866 179 50 4 486 661 36 188 9.32e-43 154
MsaG033181 MtrunA17_Chr8g0361391 75.000 88 21 1 668 755 51 137 1.36e-41 149
MsaG033181 MtrunA17_Chr2g0289041 39.326 178 96 7 122 295 35 204 1.21e-25 105
MsaG033181 MtrunA17_Chr1g0211671 72.581 62 17 0 754 815 15 76 9.36e-25 100
MsaG033181 MtrunA17_Chr3g0119761 55.844 77 34 0 555 631 55 131 2.02e-17 79.3
MsaG033181 MtrunA17_Chr2g0289101 36.434 129 75 4 195 322 8 130 4.75e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG033181 AT1G11950.1 44.363 683 295 15 143 819 272 875 2.22e-180 541
MsaG033181 AT1G11950.3 44.363 683 295 15 143 819 272 875 2.22e-180 541
MsaG033181 AT1G62310.1 46.154 663 276 18 143 796 288 878 5.63e-180 540
MsaG033181 AT4G00990.1 41.128 727 343 19 128 811 144 828 2.91e-163 495
MsaG033181 AT3G07610.1 48.816 549 213 10 276 820 415 899 3.12e-160 493
MsaG033181 AT3G07610.1 42.105 133 71 2 122 249 209 340 1.32e-24 111
MsaG033181 AT3G07610.3 47.007 568 217 11 276 820 415 921 3.05e-153 476
MsaG033181 AT3G07610.3 42.105 133 71 2 122 249 209 340 1.45e-24 110
MsaG033181 AT1G11950.2 42.036 609 268 15 143 745 272 801 3.55e-143 442
MsaG033181 AT4G00990.3 39.586 677 324 19 128 761 144 778 2.70e-139 431
MsaG033181 AT4G00990.2 39.910 669 317 19 128 753 144 770 1.84e-138 429
MsaG033181 AT1G09060.2 31.223 695 374 23 139 813 281 891 1.86e-85 292
MsaG033181 AT1G09060.1 31.223 695 374 23 139 813 281 891 1.86e-85 292
MsaG033181 AT1G09060.4 31.367 695 373 23 139 813 295 905 2.64e-85 292
MsaG033181 AT1G09060.3 31.367 695 373 23 139 813 295 905 2.64e-85 292
MsaG033181 AT4G21430.1 36.142 451 264 13 378 819 484 919 4.94e-73 257
MsaG033181 AT3G07610.2 46.602 309 133 8 271 575 410 690 2.57e-71 249
MsaG033181 AT3G07610.2 42.105 133 71 2 122 249 209 340 3.57e-24 109

Find 160 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCTAATTCTCTTAAATA+TGG 0.219846 6:+78885573 None:intergenic
ATCGACTTTACCTGCTTTAT+AGG 0.238576 6:+78882682 None:intergenic
TTCAGATATTCATTCAATTT+AGG 0.248120 6:+78882742 None:intergenic
TTACATTCATTATTAGCTTT+TGG 0.259405 6:+78884666 None:intergenic
AAAGACCAAAGAGAAGAAAA+AGG 0.261221 6:-78885936 MsaT033181.1:CDS
ATATCATCTTCCTTCTTAAC+AGG 0.276535 6:+78884504 None:intergenic
AGTACGTTGCTGACAATTAC+AGG 0.277570 6:+78884294 None:intergenic
AGCATGAGATTCAATTTCTA+TGG 0.285636 6:+78884761 None:intergenic
CTCTTTATCTTCAAGTTTAA+CGG 0.287927 6:+78884560 None:intergenic
ATATCATCTTCCTTCTTAAC+AGG 0.299520 6:+78884450 None:intergenic
CTTCGTCGTGGGGAGCTTCT+AGG 0.301830 6:-78884864 MsaT033181.1:CDS
AATGTGAACGATTTCTTTAC+CGG 0.331440 6:-78884002 MsaT033181.1:CDS
AGGCAATTGATTGCTTAAAT+TGG 0.335529 6:-78884173 MsaT033181.1:CDS
ATGATTGTTAGTGAGATAAA+AGG 0.342261 6:+78882495 None:intergenic
CTCAATGTCATGATCATTGT+TGG 0.344575 6:+78885626 None:intergenic
AGTCCCATCTGAACATTATC+AGG 0.349044 6:+78883801 None:intergenic
ACCAACTCAGAGATGCAATT+TGG 0.349840 6:+78884609 None:intergenic
TCTGTGGAACAGTGATTTAC+TGG 0.354305 6:+78881606 None:intergenic
GATGGTAGAGATTCAGTATC+TGG 0.359930 6:-78886221 MsaT033181.1:CDS
AGTGATTTACTGGAAGTTTA+CGG 0.362091 6:+78881616 None:intergenic
CTAGTCCATGGCTTCGTTGA+AGG 0.367357 6:-78886243 None:intergenic
ATTCATGAATGGTCAAAATC+TGG 0.368446 6:-78884723 MsaT033181.1:CDS
AAGAGGCTTAAGGAGGAGTA+TGG 0.378678 6:-78882469 MsaT033181.1:intron
CAAGACAAGAGGGAGCTTCT+TGG 0.383277 6:-78882985 MsaT033181.1:CDS
GTTTCTTCTTCTTTGTCGCT+AGG 0.385304 6:+78886183 None:intergenic
CCTGCCGTTTAAAGAATATA+CGG 0.386381 6:-78883862 MsaT033181.1:CDS
AGAAGCATTTCAGAGAGTTC+AGG 0.389778 6:-78882720 MsaT033181.1:CDS
TTCTTTACCGGGTACACAAA+TGG 0.390751 6:-78883990 MsaT033181.1:CDS
TACTAATCACAATTCAGTTT+CGG 0.391063 6:-78884202 MsaT033181.1:CDS
TGCTCATCTGAAGCAGTTAC+GGG 0.392512 6:+78882910 None:intergenic
TTCAATGGCACTGGAGAAAA+GGG 0.397011 6:-78884320 MsaT033181.1:CDS
AAAACTTTGTATACTGTCCT+AGG 0.399000 6:-78884383 MsaT033181.1:CDS
TTTCAATGGCACTGGAGAAA+AGG 0.401004 6:-78884321 MsaT033181.1:CDS
TTGTGCCAAAGAGAAGAAAA+AGG 0.402894 6:-78885973 MsaT033181.1:CDS
TCTGTGGTAGTCAAATATTA+AGG 0.404685 6:+78884935 None:intergenic
TTAGAGAATGATGAAGAAAC+TGG 0.411838 6:-78886125 MsaT033181.1:CDS
TTGCTCATCTGAAGCAGTTA+CGG 0.413932 6:+78882909 None:intergenic
GGAGCTTCTTGGTGATAATC+AGG 0.416631 6:-78882974 MsaT033181.1:CDS
ACACAAATGGTCGCAAAGAT+AGG 0.417742 6:-78883977 MsaT033181.1:CDS
CTGTTCCACAGAGGACAAAT+TGG 0.419919 6:-78881595 MsaT033181.1:CDS
TGCAGATCCAGTTGAGTTTG+AGG 0.420901 6:-78884838 MsaT033181.1:CDS
ACAAGTAGTGATTGTGAAGA+AGG 0.424088 6:-78886039 MsaT033181.1:CDS
TTTGACCATTCATGAATCTC+AGG 0.426830 6:+78884729 None:intergenic
AGAGAGTAATGCAGAGAAGA+AGG 0.427096 6:-78886153 MsaT033181.1:CDS
TTGATAACCTCAAACTCAAC+TGG 0.427926 6:+78884831 None:intergenic
ACCACCTTCCCTGGATCATT+CGG 0.438256 6:+78884480 None:intergenic
AGGAAAATCGAGGTAGGAAA+AGG 0.445330 6:-78886019 MsaT033181.1:CDS
CCGTATATTCTTTAAACGGC+AGG 0.445386 6:+78883862 None:intergenic
CAATCATAAGAAGAGGCTTA+AGG 0.445426 6:-78882479 MsaT033181.1:CDS
GGATCCGTATATTCTTTAAA+CGG 0.445427 6:+78883858 None:intergenic
GAAACTTGATTGCATGCATA+AGG 0.446384 6:-78885883 MsaT033181.1:intron
AAAGAGGAGACTCTTGATAA+TGG 0.452433 6:-78884543 MsaT033181.1:CDS
GCTAATAATGAATGTAATCA+TGG 0.455983 6:-78884660 MsaT033181.1:CDS
GACAAAATCAAGTGCAACCT+TGG 0.456526 6:+78881683 None:intergenic
GGTAGTCAAATATTAAGGTT+TGG 0.456642 6:+78884940 None:intergenic
GATGATATACTGAATGATCC+AGG 0.459297 6:-78884435 MsaT033181.1:CDS
AAAGAAGGAGAAGAAAATGC+TGG 0.464789 6:-78885912 MsaT033181.1:CDS
AAGGTATTTCAGCATATACT+TGG 0.472386 6:+78885599 None:intergenic
GATGATATACCGAATGATCC+AGG 0.476958 6:-78884489 MsaT033181.1:CDS
GTACTTGAATCAAGCACATC+TGG 0.479758 6:-78884276 MsaT033181.1:CDS
CACGGATTCGAGTTCCACTT+TGG 0.480355 6:+78883050 None:intergenic
GAGATAGAAGCCAAGATTCA+AGG 0.481462 6:-78885531 MsaT033181.1:intron
CAAGCACATCTGGTATAAGC+TGG 0.481486 6:-78884266 MsaT033181.1:CDS
TCATCAAGTCAGAAATTTGA+AGG 0.482021 6:-78882286 MsaT033181.1:intron
GCTTGATGCGGTAGAAAAGT+TGG 0.486404 6:-78880982 MsaT033181.1:CDS
ACCAAATTGCATCTCTGAGT+TGG 0.491046 6:-78884610 MsaT033181.1:CDS
GACTTGTAGGAATTGAGCCT+TGG 0.491834 6:-78882359 MsaT033181.1:intron
CGGAGCAGCAGCGGAGACAA+AGG 0.495455 6:+78884889 None:intergenic
TTTCTTCTTCTTTGTCGCTA+GGG 0.496852 6:+78886184 None:intergenic
AAGCTCCCCACGACGAAGCT+CGG 0.497059 6:+78884869 None:intergenic
CTAAAGATCAGTGTGCATAC+TGG 0.497463 6:-78885061 MsaT033181.1:intron
TTCAAATTTCTGACTTGATG+AGG 0.500774 6:+78882288 None:intergenic
TGATTGCTTAAATTGGTGCC+AGG 0.502959 6:-78884166 MsaT033181.1:intron
GCTGCTCCGAGCTTCGTCGT+GGG 0.506497 6:-78884875 MsaT033181.1:CDS
AAATGAAAGTGCACTAGTCA+TGG 0.509200 6:-78882866 MsaT033181.1:CDS
GCAAAATAGTGTTCGAGTCA+TGG 0.509831 6:-78882890 MsaT033181.1:CDS
TCAAGAACAAATTGCTGAGA+AGG 0.511113 6:-78885553 MsaT033181.1:CDS
CGTTAAACTTGAAGATAAAG+AGG 0.512697 6:-78884559 MsaT033181.1:CDS
CATGCAGATAATCTTGCCCT+TGG 0.516962 6:+78884808 None:intergenic
ATGGAGAGGCCAATGTTGAC+AGG 0.519072 6:-78882951 MsaT033181.1:CDS
TAAAAGGTCTGATCATGGAT+AGG 0.519693 6:+78882511 None:intergenic
ATTCTCTTAAATATGGAAGA+AGG 0.523817 6:+78885580 None:intergenic
TTCATGAATGGTCAAAATCT+GGG 0.525657 6:-78884722 MsaT033181.1:CDS
GGGTGGCATGCCGGCAGTGA+TGG 0.529308 6:-78884702 MsaT033181.1:CDS
GACGAAGCTCGGAGCAGCAG+CGG 0.530073 6:+78884880 None:intergenic
TCAAAATCTGGGTGGCATGC+CGG 0.534124 6:-78884711 MsaT033181.1:CDS
ACTTGATGAGGACAACCAGC+TGG 0.534166 6:+78882300 None:intergenic
GCTCCCTCTTGTCTTGCTCA+AGG 0.541045 6:+78882992 None:intergenic
AGGTTAAGAGCAGCTTTGAA+AGG 0.541086 6:+78883837 None:intergenic
CTAGTCATGGAAAATGAAAG+TGG 0.543959 6:-78882853 MsaT033181.1:CDS
CTTAATTGCAGTAATACTCA+CGG 0.545152 6:+78883032 None:intergenic
CAATTCAGTTTCGGATGTGA+AGG 0.546118 6:-78884193 MsaT033181.1:CDS
TGAGATAAAAGGTCTGATCA+TGG 0.546504 6:+78882506 None:intergenic
CTGCTCCGAGCTTCGTCGTG+GGG 0.547255 6:-78884874 MsaT033181.1:CDS
AACTCAGAGATGCAATTTGG+TGG 0.550293 6:+78884612 None:intergenic
TCCATGGCTTCGTTGAAGGA+TGG 0.552066 6:-78886239 MsaT033181.1:CDS
ACCATCCTTCAACGAAGCCA+TGG 0.557903 6:+78886238 None:intergenic
AATGATGAAGAAACTGGTAA+AGG 0.559773 6:-78886119 MsaT033181.1:CDS
TTTGCGACCATTTGTGTACC+CGG 0.561602 6:+78883983 None:intergenic
CGTATATTCTTTAAACGGCA+GGG 0.561613 6:+78883863 None:intergenic
GTCGCAAAGATAGGCTCGAT+TGG 0.561745 6:-78883968 MsaT033181.1:CDS
GCGGATGCTACCATCACTGC+CGG 0.564083 6:+78884692 None:intergenic
CTATTGCTCTCCTATAAAGC+AGG 0.564329 6:-78882692 MsaT033181.1:intron
AAAAGGTCTGATCATGGATA+GGG 0.566516 6:+78882512 None:intergenic
TGCTGCTCCGAGCTTCGTCG+TGG 0.568280 6:-78884876 MsaT033181.1:CDS
TCTTTCAATTTCAATAGTTG+AGG 0.569152 6:+78883945 None:intergenic
GCACCTTGAGCAAGACAAGA+GGG 0.570458 6:-78882995 MsaT033181.1:CDS
TGAAGAAGGAAAATCGAGGT+AGG 0.570825 6:-78886025 MsaT033181.1:CDS
TCACTAACAATCATAAGAAG+AGG 0.571805 6:-78882486 MsaT033181.1:CDS
TATCAGGCAGCTTCAAAGCA+AGG 0.573948 6:+78883817 None:intergenic
TTTGTCTCCCCTGAAAATGT+TGG 0.577926 6:-78881666 MsaT033181.1:CDS
ATTATCAAGCCTGTCAACAT+TGG 0.580568 6:+78882942 None:intergenic
CTGCCTGATAATGTTCAGAT+GGG 0.580666 6:-78883804 MsaT033181.1:CDS
CTCAGCCTGAGATTCATGAA+TGG 0.580958 6:-78884734 MsaT033181.1:CDS
GCTGCCTGATAATGTTCAGA+TGG 0.581979 6:-78883805 MsaT033181.1:CDS
AGTTTGAGGTTATCAACCAA+GGG 0.590691 6:-78884824 MsaT033181.1:CDS
AAGCACATCTGGTATAAGCT+GGG 0.598444 6:-78884265 MsaT033181.1:CDS
GAAGCAGTTACGGGAGAAGA+CGG 0.599610 6:+78882919 None:intergenic
AAGTGGATCATGTGATATGA+AGG 0.602990 6:-78882836 MsaT033181.1:CDS
TACCTCCAATTTGTCCTCTG+TGG 0.606074 6:+78881590 None:intergenic
AGATCTGCAAAATCATGAGA+AGG 0.607799 6:-78884355 MsaT033181.1:CDS
CGGCAGGGATGATATGAGCT+CGG 0.608155 6:+78883878 None:intergenic
CTTCTTGGTGATAATCAGGA+TGG 0.608495 6:-78882970 MsaT033181.1:CDS
CAAGGGCAAGATTATCTGCA+TGG 0.609642 6:-78884807 MsaT033181.1:CDS
ATGTGAACGATTTCTTTACC+GGG 0.609890 6:-78884001 MsaT033181.1:CDS
TTCCACAGAGGACAAATTGG+AGG 0.610429 6:-78881592 MsaT033181.1:intron
ACTGAATGATCCAGGGAAGG+TGG 0.613289 6:-78884427 MsaT033181.1:CDS
GCTGGGAACCGCTTGTCATG+TGG 0.613386 6:-78884248 MsaT033181.1:CDS
AGCTTCTGAACAAAACTCCA+AGG 0.613881 6:+78882342 None:intergenic
ACCGAATGATCCAGGGAAGG+TGG 0.613959 6:-78884481 MsaT033181.1:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.618569 6:-78882996 MsaT033181.1:CDS
ATCACAATGGAGCTTTGTCA+CGG 0.621649 6:+78883728 None:intergenic
GAGTTTGAGGTTATCAACCA+AGG 0.622153 6:-78884825 MsaT033181.1:CDS
TAGAAAAGTTGGAGAAAGCA+AGG 0.626408 6:-78880971 MsaT033181.1:intron
GTTGACTCATATTGCCAAAG+TGG 0.626432 6:-78883064 MsaT033181.1:CDS
ATGATATACCGAATGATCCA+GGG 0.630601 6:-78884488 MsaT033181.1:CDS
TGGTGATAATCAGGATGGAG+AGG 0.631154 6:-78882965 MsaT033181.1:CDS
TCATAAGAAGAGGCTTAAGG+AGG 0.634907 6:-78882476 MsaT033181.1:CDS
CGAGTGCTTGCGTTATACAG+AGG 0.635315 6:-78881643 MsaT033181.1:CDS
ATGATATACTGAATGATCCA+GGG 0.636396 6:-78884434 MsaT033181.1:CDS
GAGTAATGCAGAGAAGAAGG+AGG 0.638495 6:-78886150 MsaT033181.1:CDS
AAACTTTGTATACTGTCCTA+GGG 0.638779 6:-78884382 MsaT033181.1:CDS
ATGATATGAGCTCGGCACAA+TGG 0.653122 6:+78883886 None:intergenic
CGTCGTGGGGAGCTTCTAGG+TGG 0.653994 6:-78884861 MsaT033181.1:CDS
AATGCATGCCACATGACAAG+CGG 0.654461 6:+78884240 None:intergenic
GATCCAATCTCATGGAACAT+CGG 0.659821 6:+78880612 None:intergenic
TATACTGAATGATCCAGGGA+AGG 0.667751 6:-78884430 MsaT033181.1:CDS
TGGATCATGTGATATGAAGG+TGG 0.679236 6:-78882833 MsaT033181.1:CDS
TCAATGGCACTGGAGAAAAG+GGG 0.683003 6:-78884319 MsaT033181.1:CDS
TTCATGAATCTCAGGCTGAG+CGG 0.683492 6:+78884737 None:intergenic
ATGAGCTCGGCACAATGGTG+TGG 0.685553 6:+78883891 None:intergenic
GGGCAAGATTATCTGCATGG+TGG 0.704928 6:-78884804 MsaT033181.1:CDS
ATTGTGAAGAAGGAAAATCG+AGG 0.714430 6:-78886029 MsaT033181.1:CDS
TATACCGAATGATCCAGGGA+AGG 0.716500 6:-78884484 MsaT033181.1:CDS
GCGACAAAGAAGAAGAAACG+TGG 0.724000 6:-78886179 MsaT033181.1:CDS
CATACATGCTATGCTTGATG+CGG 0.726884 6:-78880994 MsaT033181.1:CDS
ATGAATGGTCAAAATCTGGG+TGG 0.728185 6:-78884719 MsaT033181.1:CDS
CTACATCAGACATATCACAA+TGG 0.728251 6:+78883715 None:intergenic
TGTGTTGAAGTCATGCACCA+AGG 0.743406 6:-78881700 MsaT033181.1:intron
AGTAAATCACTGTTCCACAG+AGG 0.760358 6:-78881604 MsaT033181.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 78880621 78886258 78880621 ID=MsaG033181
Chr6 mRNA 78880621 78886258 78880621 ID=MsaT033181.1;Parent=MsaG033181
Chr6 exon 78880621 78880645 78880621 ID=MsaT033181.1.exon11;Parent=MsaT033181.1
Chr6 CDS 78880621 78880645 78880621 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78880972 78881030 78880972 ID=MsaT033181.1.exon10;Parent=MsaT033181.1
Chr6 CDS 78880972 78881030 78880972 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78881593 78881712 78881593 ID=MsaT033181.1.exon9;Parent=MsaT033181.1
Chr6 CDS 78881593 78881712 78881593 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78882287 78882372 78882287 ID=MsaT033181.1.exon8;Parent=MsaT033181.1
Chr6 CDS 78882287 78882372 78882287 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78882470 78882542 78882470 ID=MsaT033181.1.exon7;Parent=MsaT033181.1
Chr6 CDS 78882470 78882542 78882470 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78882693 78883094 78882693 ID=MsaT033181.1.exon6;Parent=MsaT033181.1
Chr6 CDS 78882693 78883094 78882693 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78883716 78884033 78883716 ID=MsaT033181.1.exon5;Parent=MsaT033181.1
Chr6 CDS 78883716 78884033 78883716 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78884167 78884971 78884167 ID=MsaT033181.1.exon4;Parent=MsaT033181.1
Chr6 CDS 78884167 78884971 78884167 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78885062 78885128 78885062 ID=MsaT033181.1.exon3;Parent=MsaT033181.1
Chr6 CDS 78885062 78885128 78885062 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78885532 78885670 78885532 ID=MsaT033181.1.exon2;Parent=MsaT033181.1
Chr6 CDS 78885532 78885670 78885532 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Chr6 exon 78885884 78886258 78885884 ID=MsaT033181.1.exon1;Parent=MsaT033181.1
Chr6 CDS 78885884 78886258 78885884 ID=cds.MsaT033181.1;Parent=MsaT033181.1
Gene Sequence

>MsaT033181.1

ATGGCTTCGTTGAAGGATGGTAGAGATTCAGTATCTGGAGATGTTGAAGTTGCCCTAGCGACAAAGAAGAAGAAACGTGGAAGAGAGAGTAATGCAGAGAAGAAGGAGGCTTTAGAGAATGATGAAGAAACTGGTAAAGGTTCTTCTTCTGCAGATCCAAGAAAAAAACGAGGCAAAAAGAAAAAACTGAAGAAGGAACAAGTAGTGATTGTGAAGAAGGAAAATCGAGGTAGGAAAAGGAAGATAGTTTCTGATGAAAAACATTGTGCCAAAGAGAAGAAAAAGGTGAAGAAGGAAAAGAAAGACCAAAGAGAAGAAAAAGGAAAAGAAGGAGAAGAAAATGCTGGAAAAAAGAAACTTGATTGCATGCATAAGGAGACTAAGAACAAGACAGAAACCAACAATGATCATGACATTGAGTTCTCCAAGTATATGCTGAAATACCTTCTTCCATATTTAAGAGAATTAGATCAAGAACAAATTGCTGAGAAGGAGATAGAAGCCAAGATTCAAGGGCTCTCACTCTCTGATGAGCTAAAAATAGATGTAGCAGATTGCTCTAAAGATCAGTGTGCATACTGTGACAATTGCCAAACCTTAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCGCTGCTGCTCCGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTGCAGATCCAGTTGAGTTTGAGGTTATCAACCAAGGGCAAGATTATCTGCATGGTGGAAATGAAGAGATAACAATAACCATAGAAATTGAATCTCATGCTGCCGCTCAGCCTGAGATTCATGAATGGTCAAAATCTGGGTGGCATGCCGGCAGTGATGGTAGCATCCGCTGTCCAAAAGCTAATAATGAATGTAATCATGGTTTACTTGAGTTGAGAAGAATGTTTCCACCAAATTGCATCTCTGAGTTGGTGTGTAAAGCTGAACAACTTAAAGAAGCCGTTAAACTTGAAGATAAAGAGGAGACTCTTGATAATGGTTGCTCTTGTTTTAAGCCTGTTAAGAAGGAAGATGATATACCGAATGATCCAGGGAAGGTGGTTTTTAAGCCTGTTAAGAAGGAAGATGATATACTGAATGATCCAGGGAAGGTGGTTTTTCGTGAAGATTCCGGTGAAAACTTTGTATACTGTCCTAGGGCTATAGATCTGCAAAATCATGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAGCAACGTACTTGAATCAAGCACATCTGGTATAAGCTGGGAACCGCTTGTCATGTGGCATGCATTTCATCAGATAAGTGATACTAATCACAATTCAGTTTCGGATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGGAAATATTAATGTGAACGATTTCTTTACCGGGTACACAAATGGTCGCAAAGATAGGCTCGATTGGCCTCAACTATTGAAATTGAAAGATCATCCTCCTAATTTGTTTGAGAAAAGTTTGCCACACCATTGTGCCGAGCTCATATCATCCCTGCCGTTTAAAGAATATACGGATCCTTTCAAAGCTGCTCTTAACCTTGCTTTGAAGCTGCCTGATAATGTTCAGATGGGACTTACTACATATTTTGCTTATGGATTTTCTGAGGAGCTTGGGCGGGGTGATTCCGTGACAAAGCTCCATTGTGATATGTCTGATGTAGTAAATGTGTTGACTCATATTGCCAAAGTGGAACTCGAATCCGTGAGTATTACTGCAATTAAGAAATTGAAACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTTCTTGGTGATAATCAGGATGGAGAGGCCAATGTTGACAGGCTTGATAATCCGTCTTCTCCCGTAACTGCTTCAGATGAGCAAAATAGTGTTCGAGTCATGGAAAATGAAAGTGCACTAGTCATGGAAAATGAAAGTGGATCATGTGATATGAAGGTGGTTGATTCAGTTCATCAAGAAAATATTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAATGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCACATCTATTGCTCTCCTATAAAGCAGGTTATTCACCCTATCCATGATCAGACCTTTTATCTCACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCTTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCATCAAGTCAGAAATTTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCCCCTGAAAATGTTGGCGAGTGCTTGCGTTATACAGAGGAAATCCGTAAACTTCCAGTAAATCACTGTTCCACAGAGGACAAATTGGAGGTGAAAAAAATGATCATACATGCTATGCTTGATGCGGTAGAAAAGTTGGAGAAAGCAAGGTCTGACGAAACCGATGTTCCATGA
Protein sequence

>MsaT033181.1

MASLKDGRDSVSGDVEVALATKKKKRGRESNAEKKEALENDEETGKGSSSADPRKKRGKKKKLKKEQVVIVKKENRGRKRKIVSDEKHCAKEKKKVKKEKKDQREEKGKEGEENAGKKKLDCMHKETKNKTETNNDHDIEFSKYMLKYLLPYLRELDQEQIAEKEIEAKIQGLSLSDELKIDVADCSKDQCAYCDNCQTLIFDYHRSCTKCSFDLCLRCCSELRRGELLGGADPVEFEVINQGQDYLHGGNEEITITIEIESHAAAQPEIHEWSKSGWHAGSDGSIRCPKANNECNHGLLELRRMFPPNCISELVCKAEQLKEAVKLEDKEETLDNGCSCFKPVKKEDDIPNDPGKVVFKPVKKEDDILNDPGKVVFREDSGENFVYCPRAIDLQNHEKDLRHFQWHWRKGEPVIVSNVLESSTSGISWEPLVMWHAFHQISDTNHNSVSDVKAIDCLNWCQGNINVNDFFTGYTNGRKDRLDWPQLLKLKDHPPNLFEKSLPHHCAELISSLPFKEYTDPFKAALNLALKLPDNVQMGLTTYFAYGFSEELGRGDSVTKLHCDMSDVVNVLTHIAKVELESVSITAIKKLKQKHLEQDKRELLGDNQDGEANVDRLDNPSSPVTASDEQNSVRVMENESALVMENESGSCDMKVVDSVHQENILDGALWDIFRREDVPKLNEYLKKHFREFRHIYCSPIKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECLRYTEEIRKLPVNHCSTEDKLEVKKMIIHAMLDAVEKLEKARSDETDVP*