AlfalfaGEDB | MsaG033400

M. sativa ssp. caerulea / MsaG033400

KEGG: -
GO: GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090575 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG033400	XP_024630582.1	87.952	166	19	1	43	207	49	214	5.46e-98	294

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG033400	sp\|Q9STJ7\|BH118_ARATH	42.581	155	68	4	63	207	1	144	2.18e-30	112

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG033400	tr\|A0A072TL37\|A0A072TL37_MEDTR	87.952	166	19	1	43	207	49	214	2.61e-98	294

TFs/TRs:

Gene ID	Type	Classification
MsaG033400	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000024	MsaG033400	0.860893	2.961662e-63	2.382306e-60
MsaG000098	MsaG033400	0.809950	2.509679e-50	4.280668e-48
MsaG000117	MsaG033400	0.865316	1.290568e-64	1.234790e-61
MsaG000281	MsaG033400	0.857290	3.513589e-62	2.467719e-59
MsaG000309	MsaG033400	0.889656	4.373706e-73	1.266302e-69
MsaG000547	MsaG033400	0.826962	3.625689e-54	9.630641e-52
MsaG000622	MsaG033400	0.839155	3.457469e-57	1.314413e-54
MsaG000760	MsaG033400	0.831778	2.485046e-55	7.571084e-53
MsaG000828	MsaG033400	0.803579	5.487378e-49	8.049574e-47
MsaG001001	MsaG033400	0.822195	4.750845e-53	1.107502e-50
MsaG001013	MsaG033400	0.843709	2.215049e-58	9.730313e-56
MsaG001200	MsaG033400	0.848877	8.783600e-60	4.581690e-57
MsaG001238	MsaG033400	0.870465	2.911575e-66	3.440012e-63
MsaG001366	MsaG033400	0.836147	2.027472e-56	7.029150e-54
MsaG001911	MsaG033400	0.821438	7.094913e-53	1.620928e-50
MsaG002973	MsaG033400	0.801411	1.528654e-48	2.133764e-46
MsaG003187	MsaG033400	0.851749	1.386393e-60	7.982403e-58
MsaG004012	MsaG033400	0.877568	1.183931e-68	1.910448e-65
MsaG004479	MsaG033400	0.816354	1.002155e-51	2.004987e-49
MsaG004504	MsaG033400	0.840686	1.386055e-57	5.528575e-55
MsaG004754	MsaG033400	0.878625	5.064977e-69	8.578872e-66
MsaG004793	MsaG033400	0.846995	2.884608e-59	1.412326e-56
MsaG004830	MsaG033400	0.808337	5.542220e-50	9.092307e-48
MsaG004929	MsaG033400	0.872984	4.292042e-67	5.650213e-64
MsaG004981	MsaG033400	0.801869	1.232296e-48	1.738130e-46
MsaG005051	MsaG033400	0.830652	4.687609e-55	1.382054e-52
MsaG005104	MsaG033400	0.809157	3.708501e-50	6.205448e-48
MsaG005119	MsaG033400	0.847153	2.612798e-59	1.286062e-56
MsaG005123	MsaG033400	0.822584	3.861107e-53	9.095917e-51
MsaG005217	MsaG033400	0.820184	1.374230e-52	3.037300e-50
MsaG005292	MsaG033400	0.815570	1.496816e-51	2.935471e-49
MsaG005405	MsaG033400	0.907280	1.432088e-80	1.136689e-76
MsaG005537	MsaG033400	0.816859	7.732348e-52	1.567154e-49
MsaG005535	MsaG033400	0.800535	2.303047e-48	3.151746e-46
MsaG006029	MsaG033400	0.833220	1.095301e-55	3.480278e-53
MsaG006037	MsaG033400	0.875350	6.846658e-68	9.997908e-65
MsaG006043	MsaG033400	0.808769	4.486619e-50	7.437784e-48
MsaG006165	MsaG033400	0.826901	3.749546e-54	9.942579e-52
MsaG006118	MsaG033400	0.818792	2.844982e-52	6.061260e-50
MsaG006177	MsaG033400	0.811031	1.470283e-50	2.574773e-48
MsaG006237	MsaG033400	0.817050	7.009229e-52	1.427663e-49
MsaG006249	MsaG033400	0.879926	1.764225e-69	3.172456e-66
MsaG006304	MsaG033400	0.858941	1.141040e-62	8.522288e-60
MsaG006508	MsaG033400	0.830943	3.980143e-55	1.183373e-52
MsaG006884	MsaG033400	0.807067	1.028363e-49	1.636587e-47
MsaG006886	MsaG033400	0.800079	2.849877e-48	3.860062e-46
MsaG007109	MsaG033400	0.827798	2.291154e-54	6.230037e-52
MsaG007296	MsaG033400	0.844801	1.130596e-58	5.147084e-56
MsaG007274	MsaG033400	0.827408	2.839051e-54	7.635742e-52
MsaG007400	MsaG033400	0.808521	5.065610e-50	8.347511e-48
MsaG007499	MsaG033400	0.839147	3.473941e-57	1.320368e-54
MsaG007861	MsaG033400	0.814469	2.620470e-51	4.998202e-49
MsaG007798	MsaG033400	0.912351	5.270770e-83	5.807597e-79
MsaG008035	MsaG033400	0.837978	6.939827e-57	2.543508e-54
MsaG008085	MsaG033400	0.819152	2.358442e-52	5.072491e-50
MsaG008286	MsaG033400	0.817030	7.081932e-52	1.441717e-49
MsaG008378	MsaG033400	0.800579	2.256393e-48	3.091017e-46
MsaG008479	MsaG033400	0.861821	1.549054e-63	1.290974e-60
MsaG008881	MsaG033400	0.828960	1.204923e-54	3.384861e-52
MsaG008990	MsaG033400	0.810802	1.647259e-50	2.868598e-48
MsaG009050	MsaG033400	0.834438	5.451777e-56	1.795772e-53
MsaG009132	MsaG033400	0.826228	5.415448e-54	1.409360e-51
MsaG009265	MsaG033400	0.830434	5.294698e-55	1.551447e-52
MsaG009390	MsaG033400	0.803767	5.018910e-49	7.394541e-47
MsaG009701	MsaG033400	0.870350	3.173972e-66	3.732480e-63
MsaG010263	MsaG033400	0.842588	4.390092e-58	1.860445e-55
MsaG010571	MsaG033400	0.839800	2.355093e-57	9.136372e-55
MsaG010593	MsaG033400	0.801732	1.314185e-48	1.847834e-46
MsaG010678	MsaG033400	0.813929	3.442352e-51	6.477824e-49
MsaG010697	MsaG033400	0.812524	6.980330e-51	1.268196e-48
MsaG011039	MsaG033400	0.818684	3.008738e-52	6.392043e-50
MsaG011824	MsaG033400	0.835866	2.387415e-56	8.206896e-54
MsaG012138	MsaG033400	0.879129	3.372795e-69	5.848267e-66
MsaG012139	MsaG033400	0.805067	2.698024e-49	4.096742e-47
MsaG012140	MsaG033400	0.803074	6.974279e-49	1.011224e-46
MsaG012187	MsaG033400	0.843288	2.865582e-58	1.241892e-55
MsaG012226	MsaG033400	0.877135	1.672302e-68	2.645788e-65
MsaG012248	MsaG033400	0.802904	7.561198e-49	1.091986e-46
MsaG012290	MsaG033400	0.867454	2.724904e-65	2.842046e-62
MsaG012555	MsaG033400	0.846994	2.886049e-59	1.412983e-56
MsaG012561	MsaG033400	0.844236	1.602037e-58	7.158876e-56
MsaG012736	MsaG033400	0.814814	2.199432e-51	4.231818e-49
MsaG013184	MsaG033400	0.859002	1.094043e-62	8.189757e-60
MsaG013374	MsaG033400	0.813103	5.220996e-51	9.623168e-49
MsaG015020	MsaG033400	0.842678	4.158322e-58	1.767278e-55
MsaG016078	MsaG033400	0.871381	1.458299e-66	1.791853e-63
MsaG016352	MsaG033400	0.879051	3.592229e-69	6.205488e-66
MsaG016544	MsaG033400	0.906857	2.252194e-80	1.738396e-76
MsaG016571	MsaG033400	0.881003	7.295602e-70	1.379646e-66
MsaG016651	MsaG033400	0.810247	2.167849e-50	3.724435e-48
MsaG016944	MsaG033400	0.807142	9.914401e-50	1.580649e-47
MsaG017313	MsaG033400	0.823605	2.237367e-53	5.418558e-51
MsaG017269	MsaG033400	0.801702	1.333269e-48	1.873333e-46
MsaG017614	MsaG033400	0.807137	9.939014e-50	1.584362e-47
MsaG017672	MsaG033400	0.853434	4.608347e-61	2.815561e-58
MsaG017762	MsaG033400	0.838374	5.493649e-57	2.038183e-54
MsaG017691	MsaG033400	0.818586	3.166559e-52	6.710298e-50
MsaG017772	MsaG033400	0.826341	5.091312e-54	1.329201e-51
MsaG018104	MsaG033400	0.810006	2.441089e-50	4.169317e-48
MsaG018123	MsaG033400	0.819794	1.685666e-52	3.687129e-50
MsaG018288	MsaG033400	0.813676	3.912420e-51	7.315526e-49
MsaG018309	MsaG033400	0.802249	1.030349e-48	1.465868e-46
MsaG018322	MsaG033400	0.804102	4.278282e-49	6.352834e-47
MsaG018565	MsaG033400	0.823320	2.606334e-53	6.263432e-51
MsaG018519	MsaG033400	0.819493	1.973121e-52	4.281892e-50
MsaG018738	MsaG033400	0.831015	3.822606e-55	1.138907e-52
MsaG018741	MsaG033400	0.800631	2.201956e-48	3.020021e-46
MsaG018902	MsaG033400	0.854826	1.835746e-61	1.178537e-58
MsaG018909	MsaG033400	0.851037	2.198422e-60	1.234867e-57
MsaG019231	MsaG033400	0.816238	1.063679e-51	2.121777e-49
MsaG019303	MsaG033400	0.884375	4.344256e-71	9.652256e-68
MsaG019265	MsaG033400	0.809612	2.965422e-50	5.016846e-48
MsaG019542	MsaG033400	0.864289	2.696982e-64	2.476943e-61
MsaG020029	MsaG033400	0.826317	5.159585e-54	1.346088e-51
MsaG020290	MsaG033400	0.810821	1.631101e-50	2.841811e-48
MsaG020296	MsaG033400	0.837653	8.400390e-57	3.048271e-54
MsaG020347	MsaG033400	0.828306	1.731045e-54	4.774475e-52
MsaG020487	MsaG033400	0.823720	2.103528e-53	5.110298e-51
MsaG020525	MsaG033400	0.842017	6.210431e-58	2.584127e-55
MsaG020787	MsaG033400	0.802514	9.091113e-49	1.301296e-46
MsaG020963	MsaG033400	0.834239	6.113711e-56	2.001682e-53
MsaG020968	MsaG033400	0.847335	2.330098e-59	1.153891e-56
MsaG021238	MsaG033400	0.816611	8.784488e-52	1.769031e-49
MsaG021311	MsaG033400	0.801073	1.790698e-48	2.480438e-46
MsaG021423	MsaG033400	0.800144	2.763837e-48	3.748976e-46
MsaG021544	MsaG033400	0.810547	1.869107e-50	3.234753e-48
MsaG021986	MsaG033400	0.839746	2.432898e-57	9.421949e-55
MsaG021997	MsaG033400	0.831771	2.495838e-55	7.602372e-53
MsaG022494	MsaG033400	0.888123	1.701193e-72	4.551688e-69
MsaG022595	MsaG033400	0.852736	7.282470e-61	4.340995e-58
MsaG022597	MsaG033400	0.846664	3.550237e-59	1.718949e-56
MsaG022714	MsaG033400	0.845112	9.329516e-59	4.290865e-56
MsaG022970	MsaG033400	0.821730	6.080228e-53	1.399955e-50
MsaG023133	MsaG033400	0.825382	8.580515e-54	2.181178e-51
MsaG023205	MsaG033400	0.859890	5.937068e-63	4.596571e-60
MsaG023396	MsaG033400	0.834575	5.039240e-56	1.666622e-53
MsaG023609	MsaG033400	0.803539	5.595028e-49	8.199925e-47
MsaG023787	MsaG033400	0.837323	1.019734e-56	3.663102e-54
MsaG023788	MsaG033400	0.806249	1.527410e-49	2.384467e-47
MsaG023890	MsaG033400	0.827757	2.342882e-54	6.363477e-52
MsaG025187	MsaG033400	0.815100	1.901942e-51	3.685778e-49
MsaG025492	MsaG033400	0.809506	3.124289e-50	5.272340e-48
MsaG027027	MsaG033400	0.852031	1.153737e-60	6.710004e-58
MsaG027569	MsaG033400	0.852706	7.430032e-61	4.424170e-58
MsaG027653	MsaG033400	0.833307	1.042368e-55	3.320293e-53
MsaG027692	MsaG033400	0.818419	3.453056e-52	7.285651e-50
MsaG027749	MsaG033400	0.821661	6.307234e-53	1.449540e-50
MsaG027862	MsaG033400	0.827289	3.030334e-54	8.123281e-52
MsaG027933	MsaG033400	0.825033	1.036509e-53	2.609752e-51
MsaG028091	MsaG033400	0.849834	4.768167e-60	2.569596e-57
MsaG028713	MsaG033400	0.846940	2.984861e-59	1.458673e-56
MsaG028767	MsaG033400	0.831256	3.336899e-55	1.001105e-52
MsaG028758	MsaG033400	0.830817	4.271760e-55	1.265500e-52
MsaG028804	MsaG033400	0.807634	7.805841e-50	1.259160e-47
MsaG028951	MsaG033400	0.843134	3.149030e-58	1.357945e-55
MsaG029194	MsaG033400	0.826749	4.074983e-54	1.076004e-51
MsaG029232	MsaG033400	0.860216	4.739471e-63	3.715871e-60
MsaG029335	MsaG033400	0.809770	2.742835e-50	4.658076e-48
MsaG029424	MsaG033400	0.822805	3.431872e-53	8.133308e-51
MsaG029773	MsaG033400	0.888111	1.720030e-72	4.599576e-69
MsaG029762	MsaG033400	0.805345	2.360488e-49	3.607494e-47
MsaG029763	MsaG033400	0.806935	1.096106e-49	1.738952e-47
MsaG029887	MsaG033400	0.831394	3.087618e-55	9.300831e-53
MsaG030158	MsaG033400	0.808047	6.384959e-50	1.040237e-47
MsaG030334	MsaG033400	0.815156	1.847797e-51	3.586033e-49
MsaG030401	MsaG033400	0.801503	1.463354e-48	2.046888e-46
MsaG030905	MsaG033400	0.825438	8.322821e-54	2.118973e-51
MsaG030955	MsaG033400	0.845804	6.073289e-59	2.857701e-56
MsaG030986	MsaG033400	0.836795	1.389572e-56	4.912221e-54
MsaG031058	MsaG033400	0.822754	3.526279e-53	8.345579e-51
MsaG031236	MsaG033400	0.901060	9.064179e-78	4.936438e-74
MsaG032101	MsaG033400	0.892793	2.544926e-74	8.698096e-71
MsaG032294	MsaG033400	0.821928	5.474650e-53	1.267142e-50
MsaG032332	MsaG033400	0.859170	9.753016e-63	7.347262e-60
MsaG032504	MsaG033400	0.809135	3.748264e-50	6.268845e-48
MsaG032786	MsaG033400	0.854482	2.307131e-61	1.463253e-58
MsaG033134	MsaG033400	0.860314	4.427241e-63	3.484514e-60
MsaG033400	MsaG033568	0.803012	7.182213e-49	1.039875e-46
MsaG033400	MsaG033596	0.926067	2.071650e-90	6.174973e-86
MsaG033400	MsaG033694	0.833961	7.168392e-56	2.327669e-53
MsaG033400	MsaG033796	0.830221	5.966568e-55	1.737702e-52
MsaG033400	MsaG033921	0.801831	1.254758e-48	1.768246e-46
MsaG033400	MsaG034079	0.845441	7.608225e-59	3.537276e-56
MsaG033400	MsaG034207	0.808247	5.790710e-50	9.479885e-48
MsaG033400	MsaG034444	0.860598	3.635564e-63	2.892258e-60
MsaG033400	MsaG034559	0.809777	2.733521e-50	4.643047e-48
MsaG033400	MsaG034601	0.851221	1.951960e-60	1.103393e-57
MsaG033400	MsaG034605	0.854196	2.786538e-61	1.749423e-58
MsaG033400	MsaG034633	0.822517	4.001965e-53	9.410638e-51
MsaG033400	MsaG034861	0.804585	3.398056e-49	5.102161e-47
MsaG033400	MsaG034875	0.826169	5.593466e-54	1.453332e-51
MsaG033400	MsaG035054	0.854783	1.889031e-61	1.210882e-58
MsaG033400	MsaG035439	0.822745	3.543584e-53	8.384353e-51
MsaG033400	MsaG035935	0.856025	8.245327e-62	5.528354e-59
MsaG033400	MsaG036047	0.809021	3.963358e-50	6.610391e-48
MsaG033400	MsaG036056	0.809005	3.996431e-50	6.662947e-48
MsaG033400	MsaG037009	0.856006	8.349680e-62	5.594449e-59
MsaG033400	MsaG038015	0.814248	2.930862e-51	5.559351e-49
MsaG033400	MsaG038117	0.821544	6.708341e-53	1.536941e-50
MsaG033400	MsaG039374	0.805977	1.741600e-49	2.701243e-47
MsaG033400	MsaG039802	0.801769	1.291484e-48	1.817407e-46
MsaG033400	MsaG040350	0.815630	1.451646e-51	2.851282e-49
MsaG033400	MsaG040582	0.841026	1.130044e-57	4.556073e-55
MsaG033400	MsaG040585	0.839079	3.618892e-57	1.372610e-54
MsaG033400	MsaG040649	0.811427	1.207491e-50	2.135173e-48
MsaG033400	MsaG040679	0.822499	4.041236e-53	9.498211e-51
MsaG033400	MsaG040682	0.803107	6.867534e-49	9.964998e-47
MsaG033400	MsaG041335	0.844122	1.718092e-58	7.649080e-56
MsaG033400	MsaG041738	0.848638	1.022227e-59	5.289154e-57
MsaG033400	MsaG041743	0.842682	4.148176e-58	1.763173e-55
MsaG033400	MsaG041774	0.848089	1.448223e-59	7.356033e-57
MsaG033400	MsaG042142	0.810796	1.651896e-50	2.876243e-48
MsaG033400	MsaG042535	0.809435	3.234164e-50	5.448360e-48
MsaG033400	MsaG042898	0.846804	3.251966e-59	1.581968e-56
MsaG033400	MsaG043414	0.839185	3.397530e-57	1.292829e-54
MsaG033400	MsaG043976	0.849640	5.399370e-60	2.890881e-57
MsaG033400	MsaG044233	0.814656	2.382420e-51	4.565587e-49
MsaG033400	MsaG044218	0.823808	2.006306e-53	4.885769e-51
MsaG033400	MsaG044389	0.811703	1.052329e-50	1.873467e-48
MsaG033400	MsaG044390	0.858434	1.613852e-62	1.182833e-59
MsaG033400	MsaG044752	0.846811	3.236382e-59	1.574805e-56
MsaG033400	MsaG044786	0.837414	9.665693e-57	3.482093e-54
MsaG033400	MsaG044849	0.803029	7.125891e-49	1.032104e-46
MsaG033400	MsaG044885	0.880330	1.268169e-69	2.324283e-66
MsaG033400	MsaG045004	0.866227	6.671499e-65	6.621183e-62
MsaG033400	MsaG045078	0.843458	2.582051e-58	1.125146e-55
MsaG033400	MsaG045205	0.807584	8.000499e-50	1.288990e-47
MsaG033400	MsaG045225	0.821066	8.639220e-53	1.954465e-50
MsaG033400	MsaG045345	0.888287	1.472373e-72	3.972076e-69
MsaG033400	MsaG045337	0.809838	2.652033e-50	4.511380e-48
MsaG033400	MsaG045392	0.814080	3.189817e-51	6.025161e-49
MsaG033400	MsaG045508	0.802910	7.538366e-49	1.088857e-46
MsaG033400	MsaG045576	0.891020	1.283387e-73	3.988497e-70
MsaG033400	MsaG045745	0.819394	2.077793e-52	4.497395e-50
MsaG033400	MsaG045823	0.820675	1.061829e-52	2.377263e-50
MsaG033400	MsaG045873	0.813510	4.252801e-51	7.919152e-49
MsaG033400	MsaG045974	0.820393	1.231022e-52	2.735847e-50
MsaG033400	MsaG045984	0.804342	3.815836e-49	5.697491e-47
MsaG033400	MsaG046298	0.803260	6.386002e-49	9.298975e-47
MsaG033400	MsaG046313	0.806050	1.681551e-49	2.612634e-47
MsaG033400	MsaG046546	0.884175	5.150346e-71	1.133348e-67
MsaG033400	MsaG046746	0.865476	1.149071e-64	1.106452e-61
MsaG033400	MsaG046807	0.845226	8.694818e-59	4.013696e-56
MsaG033400	MsaG046977	0.806815	1.161767e-49	1.837934e-47
MsaG033400	MsaG047014	0.850051	4.148475e-60	2.252135e-57
MsaG033400	MsaG047095	0.820191	1.369166e-52	3.026707e-50
MsaG033400	MsaG047152	0.906513	3.253188e-80	2.459172e-76
MsaG033400	MsaG000837	0.845660	6.638495e-59	3.108953e-56
MsaG033400	MsaG001986	0.819338	2.139694e-52	4.624811e-50
MsaG033400	MsaG003672	0.845226	8.692544e-59	4.012679e-56
MsaG033400	MsaG000974	0.832287	1.863342e-55	5.760966e-53
MsaG033400	MsaG000633	0.800963	1.885082e-48	2.604734e-46
MsaG033400	MsaG007338	0.855397	1.254981e-61	8.225056e-59
MsaG033400	MsaG007923	0.819064	2.469374e-52	5.298817e-50
MsaG033400	MsaG007366	0.823311	2.618840e-53	6.291878e-51
MsaG033400	MsaG011182	0.828278	1.757485e-54	4.843714e-52
MsaG033400	MsaG007533	0.811963	9.242221e-51	1.655982e-48
MsaG033400	MsaG009207	0.888827	9.138755e-73	2.534116e-69
MsaG033400	MsaG008766	0.847966	1.564656e-59	7.914913e-57
MsaG033400	MsaG015244	0.814286	2.874548e-51	5.457849e-49
MsaG033400	MsaG016152	0.817255	6.307355e-52	1.291502e-49
MsaG033400	MsaG016790	0.833898	7.435826e-56	2.409977e-53
MsaG033400	MsaG013115	0.816256	1.054068e-51	2.103550e-49
MsaG033400	MsaG013237	0.801856	1.240068e-48	1.748542e-46
MsaG033400	MsaG013857	0.805972	1.746116e-49	2.707904e-47
MsaG033400	MsaG013372	0.804616	3.348114e-49	5.030795e-47
MsaG033400	MsaG015507	0.898263	1.436785e-76	6.644063e-73
MsaG033400	MsaG024279	0.830906	4.063906e-55	1.207013e-52
MsaG033400	MsaG018096	0.817775	4.822279e-52	1.000681e-49
MsaG033400	MsaG023315	0.855597	1.097702e-61	7.246956e-59
MsaG033400	MsaG023443	0.831339	3.184740e-55	9.577761e-53
MsaG033400	MsaG026431	0.808723	4.588835e-50	7.598980e-48
MsaG033400	MsaG028141	0.816833	7.836306e-52	1.587155e-49
MsaG033400	MsaG027790	0.880971	7.490049e-70	1.414521e-66
MsaG033400	MsaG026536	0.835973	2.243874e-56	7.738311e-54
MsaG033400	MsaG028127	0.807094	1.015068e-49	1.616456e-47
MsaG033400	MsaG030963	0.826972	3.605452e-54	9.579508e-52
MsaG033400	MsaG033149	0.843668	2.271268e-58	9.964301e-56
MsaG033400	MsaG033548	0.832532	1.621299e-55	5.048471e-53
MsaG033400	MsaG032288	0.809196	3.637076e-50	6.091575e-48
MsaG033400	MsaG032342	0.829341	9.750042e-55	2.768866e-52
MsaG033400	MsaG030982	0.826118	5.751437e-54	1.492260e-51
MsaG033400	MsaG030190	0.810358	2.052164e-50	3.535278e-48
MsaG033400	MsaG034520	0.866795	4.413633e-65	4.482717e-62
MsaG033400	MsaG031718	0.804443	3.636298e-49	5.441980e-47
MsaG033400	MsaG032809	0.807068	1.027726e-49	1.635624e-47
MsaG033400	MsaG032266	0.842067	6.025727e-58	2.511200e-55
MsaG033400	MsaG030214	0.876231	3.422879e-68	5.200652e-65
MsaG033400	MsaG033182	0.832716	1.460167e-55	4.571311e-53
MsaG033400	MsaG034183	0.849511	5.861826e-60	3.124810e-57
MsaG033400	MsaG030000	0.836201	1.965125e-56	6.823805e-54
MsaG033400	MsaG031914	0.800229	2.657314e-48	3.611359e-46
MsaG033400	MsaG036784	0.860544	3.774486e-63	2.996461e-60
MsaG033400	MsaG037156	0.840537	1.515928e-57	6.018446e-55
MsaG033400	MsaG036665	0.824568	1.332447e-53	3.312526e-51
MsaG033400	MsaG035112	0.852533	8.316845e-61	4.921972e-58
MsaG033400	MsaG038711	0.874605	1.225096e-67	1.731733e-64
MsaG033400	MsaG038291	0.842676	4.161669e-58	1.768617e-55
MsaG033400	MsaG036963	0.813362	4.582246e-51	8.500885e-49
MsaG033400	MsaG035498	0.840819	1.279752e-57	5.125907e-55
MsaG033400	MsaG037372	0.824175	1.647591e-53	4.052074e-51
MsaG033400	MsaG042833	0.853364	4.823611e-61	2.939688e-58
MsaG033400	MsaG042078	0.814733	2.291515e-51	4.399854e-49
MsaG033400	MsaG043458	0.827909	2.154734e-54	5.877472e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG033400	MtrunA17_Chr6g0474671	87.952	166	19	1	43	207	49	214	5.02e-102	294
MsaG033400	MtrunA17_Chr1g0204351	52.874	174	75	3	39	207	47	218	9.94e-55	174
MsaG033400	MtrunA17_Chr1g0204361	38.217	157	89	2	58	207	13	168	1.74e-32	115
MsaG033400	MtrunA17_Chr6g0474681	41.060	151	84	2	61	206	3	153	1.03e-30	111
MsaG033400	MtrunA17_Chr6g0472071	74.419	43	11	0	1	43	211	253	3.44e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG033400	AT4G25400.1	42.500	160	71	4	58	207	19	167	8.81e-32	114
MsaG033400	AT4G25400.2	42.500	160	71	4	58	207	19	167	9.65e-32	114
MsaG033400	AT4G25410.1	39.333	150	81	2	68	207	47	196	1.20e-30	112
MsaG033400	AT5G51780.2	40.764	157	84	1	60	207	21	177	5.59e-30	110
MsaG033400	AT5G51780.1	40.909	154	82	1	63	207	1	154	8.96e-30	108
MsaG033400	AT5G51790.4	41.558	154	78	3	64	207	27	178	1.27e-28	106
MsaG033400	AT5G51790.1	41.558	154	78	3	64	207	27	178	1.45e-28	106
MsaG033400	AT5G51790.2	42.208	154	77	4	64	207	92	243	5.24e-28	106
MsaG033400	AT5G51790.3	41.558	154	78	3	64	207	92	243	5.38e-28	106
MsaG033400	AT1G62975.2	48.235	85	42	1	51	135	63	145	9.06e-20	84.7
MsaG033400	AT1G62975.1	48.235	85	42	1	51	135	63	145	9.95e-20	84.7
MsaG033400	AT1G12540.1	34.641	153	87	4	68	207	79	231	2.04e-18	81.3

Find 29 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAGAGTTACTAAAATTAT+TGG	0.157017	6:+86928585	MsaT033400.1:CDS
TTCTCAAAATTCCATTATTC+TGG	0.212014	6:-86928522	None:intergenic
TCATAAAGTAGTTCATTATT+TGG	0.217906	6:-86927425	None:intergenic
TTAAATGTTCACCAGAATAA+TGG	0.283582	6:+86928511	MsaT033400.1:CDS
ACTAAAATTATTGGCTAAAG+AGG	0.322448	6:+86928594	MsaT033400.1:CDS
GGAACAAAAGTTACTCCTAT+TGG	0.337704	6:+86922420	MsaT033400.1:CDS
GGATCGGAGAGATGCATAAT+AGG	0.379636	6:-86927537	None:intergenic
ATAGAGAGATTGAGAAGAAA+AGG	0.391251	6:+86927498	MsaT033400.1:CDS
CAAAATAATATCAATAAACT+TGG	0.435192	6:+86928412	MsaT033400.1:CDS
AAATAATGAACTACTTTATG+AGG	0.483202	6:+86927427	MsaT033400.1:CDS
TACATGACTTGTACTCCAAT+AGG	0.494899	6:-86922435	None:intergenic
AAAACTCGCCAATTCTAAGC+TGG	0.500520	6:+86928456	MsaT033400.1:CDS
GAAGAAAAGGAGGCAAGAAA+TGG	0.503359	6:+86927511	MsaT033400.1:CDS
ATTTACAAGTGGCTTAAAAG+AGG	0.506030	6:+86928549	MsaT033400.1:CDS
ATACCTCACACATGACACTT+TGG	0.523655	6:-86928666	None:intergenic
GCTTCCTCTTGAGTTCATCA+AGG	0.524427	6:+86927562	MsaT033400.1:CDS
TTGAGAATTGAATTTACAAG+TGG	0.546189	6:+86928538	MsaT033400.1:CDS
CTAAAATTATTGGCTAAAGA+GGG	0.551865	6:+86928595	MsaT033400.1:CDS
CAAGTGGCTTAAAAGAGGAA+AGG	0.561553	6:+86928554	MsaT033400.1:CDS
TGCGTTACAACAGAAATCAA+TGG	0.564243	6:+86928634	MsaT033400.1:CDS
ATAATTCTAATGAACAAATG+AGG	0.576628	6:+86927465	MsaT033400.1:CDS
CATTTAAATTGCATGATGCA+TGG	0.579018	6:-86928495	None:intergenic
AATATCTGATCATACGAATG+AGG	0.579968	6:+86928366	MsaT033400.1:CDS
CTAACCTTGATGAACTCAAG+AGG	0.593616	6:-86927566	None:intergenic
GATGAACTCAAGAGGAAGCA+AGG	0.597305	6:-86927558	None:intergenic
GAGAGATTGAGAAGAAAAGG+AGG	0.599248	6:+86927501	MsaT033400.1:CDS
ACTCAAGAGGAAGCAAGGAT+CGG	0.611742	6:-86927553	None:intergenic
GAACTTGATCAAAAGCAATG+AGG	0.650045	6:+86922495	MsaT033400.1:CDS
GCTCCAAAGTGTCATGTGTG+AGG	0.704417	6:+86928663	MsaT033400.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	86922418	86928690	86922418	ID=MsaG033400
Chr6	mRNA	86922418	86928690	86922418	ID=MsaT033400.1;Parent=MsaG033400
Chr6	exon	86922418	86922546	86922418	ID=MsaT033400.1.exon1;Parent=MsaT033400.1
Chr6	CDS	86922418	86922546	86922418	ID=cds.MsaT033400.1;Parent=MsaT033400.1
Chr6	exon	86927425	86927583	86927425	ID=MsaT033400.1.exon2;Parent=MsaT033400.1
Chr6	CDS	86927425	86927583	86927425	ID=cds.MsaT033400.1;Parent=MsaT033400.1
Chr6	exon	86928355	86928690	86928355	ID=MsaT033400.1.exon3;Parent=MsaT033400.1
Chr6	CDS	86928355	86928690	86928355	ID=cds.MsaT033400.1;Parent=MsaT033400.1

Gene Sequence

>MsaT033400.1

ATGGAACAAAAGTTACTCCTATTGGAGTACAAGTCATGTACTGAAGCTAAGCTAGAAGAAGCTAGAGCAAGAGAAGAGAACTTGATCAAAAGCAATGAGGAATTCAAGAATGATATGAAGCTACAACAACCAAATAATGAACTACTTTATGAGGCTGCTAAGAATCATGATAATTCTAATGAACAAATGAGGAAAATGATTCATAGAGAGATTGAGAAGAAAAGGAGGCAAGAAATGGCAACCTATTATGCATCTCTCCGATCCTTGCTTCCTCTTGAGTTCATCAAGGGAAAGCGATCAATATCTGATCATACGAATGAGGCAGTGAATTACATAAAACACATGCAAAATAATATCAATAAACTTGGTGCCAAGAGAGATGAACTCAAAAAACTCGCCAATTCTAAGCTGGAAAATAATGAGAGCAACCATGCATCATGCAATTTAAATGTTCACCAGAATAATGGAATTTTGAGAATTGAATTTACAAGTGGCTTAAAAGAGGAAAGGCTCAAACTTTCAGAGTTACTAAAATTATTGGCTAAAGAGGGACTTGAAGTTGATAGTTGCGTTACAACAGAAATCAATGGTAGATTGCTCCAAAGTGTCATGTGTGAGGTATAA

Protein sequence

>MsaT033400.1

MEQKLLLLEYKSCTEAKLEEARAREENLIKSNEEFKNDMKLQQPNNELLYEAAKNHDNSNEQMRKMIHREIEKKRRQEMATYYASLRSLLPLEFIKGKRSISDHTNEAVNYIKHMQNNINKLGAKRDELKKLANSKLENNESNHASCNLNVHQNNGILRIEFTSGLKEERLKLSELLKLLAKEGLEVDSCVTTEINGRLLQSVMCEV*