Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG033899 | PTQ38746.1 | 61.702 | 517 | 127 | 11 | 77 | 584 | 474 | 928 | 0.0 | 570 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG033899 | sp|Q54BC9|DYRK2_DICDI | 40.598 | 234 | 121 | 4 | 351 | 583 | 585 | 801 | 9.46e-48 | 183 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG033899 | tr|A0A2R6WY12|A0A2R6WY12_MARPO | 61.702 | 517 | 127 | 11 | 77 | 584 | 474 | 928 | 0.0 | 570 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
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PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG033899 | MtrunA17_Chr6g0480541 | 90.816 | 294 | 14 | 1 | 291 | 584 | 819 | 1099 | 0.0 | 550 |
MsaG033899 | MtrunA17_Chr6g0480541 | 88.235 | 272 | 8 | 2 | 22 | 290 | 309 | 559 | 5.42e-146 | 452 |
MsaG033899 | MtrunA17_Chr5g0437131 | 72.222 | 252 | 57 | 1 | 332 | 583 | 365 | 603 | 3.16e-127 | 390 |
MsaG033899 | MtrunA17_Chr6g0480481 | 72.065 | 247 | 20 | 2 | 344 | 590 | 8 | 205 | 1.27e-115 | 342 |
MsaG033899 | MtrunA17_Chr8g0369241 | 40.826 | 218 | 109 | 5 | 369 | 583 | 138 | 338 | 3.55e-40 | 157 |
MsaG033899 | MtrunA17_Chr1g0210061 | 36.327 | 245 | 124 | 7 | 365 | 595 | 605 | 831 | 8.51e-37 | 147 |
MsaG033899 | MtrunA17_Chr3g0139371 | 32.819 | 259 | 128 | 6 | 353 | 585 | 55 | 293 | 1.06e-31 | 127 |
MsaG033899 | MtrunA17_Chr3g0116701 | 32.558 | 258 | 131 | 6 | 353 | 585 | 75 | 314 | 7.47e-31 | 125 |
MsaG033899 | MtrunA17_Chr4g0058241 | 31.250 | 256 | 135 | 4 | 353 | 585 | 81 | 318 | 4.28e-30 | 123 |
MsaG033899 | MtrunA17_Chr3g0123491 | 31.923 | 260 | 132 | 7 | 353 | 585 | 74 | 315 | 5.76e-29 | 119 |
MsaG033899 | MtrunA17_Chr6g0480491 | 92.157 | 51 | 4 | 0 | 291 | 341 | 128 | 178 | 6.87e-22 | 93.6 |
MsaG033899 | MtrunA17_Chr3g0096631 | 31.004 | 229 | 123 | 8 | 367 | 583 | 22 | 227 | 4.58e-21 | 97.4 |
MsaG033899 | MtrunA17_Chr2g0287271 | 30.568 | 229 | 124 | 8 | 367 | 583 | 22 | 227 | 6.06e-21 | 97.1 |
MsaG033899 | MtrunA17_Chr5g0443351 | 31.034 | 232 | 119 | 8 | 367 | 583 | 19 | 224 | 9.04e-21 | 95.9 |
MsaG033899 | MtrunA17_Chr4g0065851 | 30.131 | 229 | 125 | 8 | 367 | 583 | 22 | 227 | 9.66e-21 | 96.3 |
MsaG033899 | MtrunA17_Chr8g0350311 | 26.603 | 312 | 179 | 11 | 299 | 585 | 52 | 338 | 4.00e-20 | 93.6 |
MsaG033899 | MtrunA17_Chr8g0359091 | 30.568 | 229 | 124 | 8 | 367 | 583 | 23 | 228 | 9.67e-20 | 93.2 |
MsaG033899 | MtrunA17_Chr6g0482681 | 30.131 | 229 | 125 | 8 | 367 | 583 | 86 | 291 | 2.93e-19 | 91.7 |
MsaG033899 | MtrunA17_Chr8g0392811 | 29.694 | 229 | 126 | 8 | 367 | 583 | 114 | 319 | 3.49e-19 | 91.7 |
MsaG033899 | MtrunA17_Chr1g0193081 | 28.992 | 238 | 135 | 8 | 359 | 583 | 56 | 272 | 1.36e-18 | 88.6 |
MsaG033899 | MtrunA17_Chr2g0284091 | 30.594 | 219 | 126 | 7 | 370 | 583 | 40 | 237 | 1.54e-18 | 87.8 |
MsaG033899 | MtrunA17_Chr8g0348481 | 30.516 | 213 | 120 | 6 | 376 | 582 | 43 | 233 | 2.25e-18 | 87.4 |
MsaG033899 | MtrunA17_Chr4g0045841 | 29.577 | 213 | 118 | 8 | 376 | 580 | 61 | 249 | 2.84e-18 | 87.0 |
MsaG033899 | MtrunA17_Chr2g0314321 | 29.150 | 247 | 121 | 8 | 367 | 583 | 22 | 244 | 5.27e-18 | 87.8 |
MsaG033899 | MtrunA17_Chr7g0246591 | 26.524 | 328 | 179 | 12 | 295 | 583 | 34 | 338 | 7.46e-18 | 86.7 |
MsaG033899 | MtrunA17_Chr7g0248461 | 28.959 | 221 | 113 | 7 | 376 | 582 | 44 | 234 | 2.29e-17 | 84.3 |
MsaG033899 | MtrunA17_Chr5g0397261 | 30.047 | 213 | 121 | 6 | 376 | 582 | 47 | 237 | 2.31e-17 | 84.3 |
MsaG033899 | MtrunA17_Chr4g0030151 | 28.708 | 209 | 125 | 7 | 376 | 580 | 45 | 233 | 7.10e-17 | 82.8 |
MsaG033899 | MtrunA17_Chr8g0369451 | 28.311 | 219 | 125 | 6 | 369 | 582 | 3 | 194 | 2.53e-16 | 81.6 |
MsaG033899 | MtrunA17_Chr5g0409421 | 28.111 | 217 | 124 | 7 | 369 | 580 | 3 | 192 | 3.37e-16 | 81.3 |
MsaG033899 | MtrunA17_Chr3g0141871 | 27.111 | 225 | 129 | 8 | 366 | 580 | 28 | 227 | 6.03e-16 | 80.1 |
MsaG033899 | MtrunA17_Chr4g0030231 | 36.290 | 124 | 68 | 4 | 460 | 580 | 119 | 234 | 9.22e-16 | 79.3 |
MsaG033899 | MtrunA17_Chr4g0030241 | 41.237 | 97 | 49 | 4 | 490 | 580 | 1 | 95 | 2.96e-15 | 74.3 |
MsaG033899 | MtrunA17_Chr4g0013131 | 30.508 | 236 | 135 | 8 | 364 | 593 | 6 | 218 | 2.99e-15 | 78.6 |
MsaG033899 | MtrunA17_Chr4g0002001 | 27.679 | 224 | 148 | 6 | 369 | 585 | 3 | 219 | 3.09e-15 | 77.0 |
MsaG033899 | MtrunA17_Chr8g0387401 | 28.507 | 221 | 114 | 8 | 376 | 582 | 58 | 248 | 3.22e-15 | 77.8 |
MsaG033899 | MtrunA17_Chr2g0284011 | 29.661 | 236 | 137 | 9 | 364 | 593 | 6 | 218 | 3.77e-15 | 78.2 |
MsaG033899 | MtrunA17_Chr7g0244521 | 30.508 | 236 | 135 | 8 | 364 | 593 | 6 | 218 | 8.94e-15 | 77.0 |
MsaG033899 | MtrunA17_Chr1g0170551 | 29.464 | 224 | 119 | 8 | 369 | 583 | 6 | 199 | 1.68e-14 | 77.4 |
MsaG033899 | MtrunA17_Chr3g0102571 | 39.362 | 94 | 51 | 3 | 491 | 580 | 184 | 275 | 4.03e-14 | 74.7 |
MsaG033899 | MtrunA17_Chr2g0284031 | 27.935 | 247 | 145 | 9 | 363 | 601 | 24 | 245 | 9.49e-14 | 73.9 |
MsaG033899 | MtrunA17_Chr5g0432491 | 26.848 | 257 | 134 | 9 | 368 | 600 | 21 | 247 | 9.52e-14 | 73.6 |
MsaG033899 | MtrunA17_Chr1g0197721 | 24.793 | 242 | 131 | 7 | 370 | 590 | 51 | 262 | 9.55e-14 | 73.9 |
MsaG033899 | MtrunA17_Chr2g0304111 | 28.800 | 250 | 134 | 7 | 367 | 602 | 20 | 239 | 9.67e-14 | 73.9 |
MsaG033899 | MtrunA17_Chr3g0107051 | 28.099 | 242 | 145 | 8 | 366 | 601 | 17 | 235 | 1.02e-13 | 73.6 |
MsaG033899 | MtrunA17_Chr3g0099951 | 26.016 | 246 | 150 | 8 | 366 | 602 | 10 | 232 | 1.39e-13 | 73.2 |
MsaG033899 | MtrunA17_Chr4g0057791 | 41.176 | 102 | 54 | 3 | 485 | 582 | 316 | 415 | 2.66e-13 | 72.8 |
MsaG033899 | MtrunA17_Chr5g0406251 | 29.858 | 211 | 120 | 9 | 376 | 583 | 301 | 486 | 4.24e-13 | 72.0 |
MsaG033899 | MtrunA17_Chr4g0074111 | 26.984 | 252 | 142 | 10 | 353 | 593 | 4 | 224 | 4.45e-13 | 71.2 |
MsaG033899 | MtrunA17_Chr1g0188031 | 27.711 | 249 | 136 | 10 | 365 | 598 | 15 | 234 | 8.40e-13 | 70.9 |
MsaG033899 | MtrunA17_Chr4g0059751 | 32.759 | 116 | 68 | 2 | 479 | 585 | 177 | 291 | 9.38e-13 | 70.5 |
MsaG033899 | MtrunA17_Chr6g0483151 | 28.125 | 224 | 124 | 10 | 366 | 580 | 10 | 205 | 1.01e-12 | 70.5 |
MsaG033899 | MtrunA17_Chr5g0407121 | 30.488 | 164 | 100 | 3 | 361 | 523 | 29 | 179 | 1.34e-12 | 70.1 |
MsaG033899 | MtrunA17_Chr3g0114511 | 26.667 | 240 | 135 | 7 | 365 | 593 | 27 | 236 | 1.88e-12 | 69.7 |
MsaG033899 | MtrunA17_Chr1g0205931 | 27.966 | 236 | 116 | 9 | 369 | 583 | 54 | 256 | 2.26e-12 | 70.1 |
MsaG033899 | MtrunA17_Chr1g0205421 | 28.571 | 238 | 127 | 10 | 365 | 589 | 7 | 214 | 2.73e-12 | 69.3 |
MsaG033899 | MtrunA17_Chr1g0202101 | 28.780 | 205 | 110 | 7 | 389 | 583 | 296 | 474 | 2.85e-12 | 69.3 |
MsaG033899 | MtrunA17_Chr3g0091281 | 27.542 | 236 | 139 | 7 | 365 | 593 | 7 | 217 | 3.21e-12 | 66.6 |
MsaG033899 | MtrunA17_Chr4g0027671 | 34.395 | 157 | 89 | 5 | 368 | 523 | 37 | 180 | 3.46e-12 | 69.3 |
MsaG033899 | MtrunA17_Chr1g0179611 | 30.994 | 171 | 98 | 5 | 358 | 523 | 30 | 185 | 4.60e-12 | 68.9 |
MsaG033899 | MtrunA17_Chr8g0383451 | 27.488 | 211 | 131 | 7 | 376 | 583 | 4 | 195 | 5.92e-12 | 68.2 |
MsaG033899 | MtrunA17_Chr8g0384301 | 33.775 | 151 | 88 | 6 | 436 | 581 | 350 | 493 | 6.48e-12 | 68.6 |
MsaG033899 | MtrunA17_Chr6g0487231 | 38.318 | 107 | 60 | 3 | 488 | 590 | 165 | 269 | 1.31e-11 | 66.6 |
MsaG033899 | MtrunA17_Chr4g0047201 | 31.081 | 148 | 88 | 6 | 444 | 584 | 259 | 399 | 1.58e-11 | 67.0 |
MsaG033899 | MtrunA17_Chr6g0468751 | 29.362 | 235 | 123 | 9 | 370 | 592 | 19 | 222 | 1.62e-11 | 67.0 |
MsaG033899 | MtrunA17_Chr1g0157231 | 26.108 | 203 | 115 | 7 | 389 | 582 | 159 | 335 | 1.84e-11 | 66.2 |
MsaG033899 | MtrunA17_Chr2g0320631 | 31.210 | 157 | 94 | 3 | 368 | 523 | 38 | 181 | 2.44e-11 | 66.6 |
MsaG033899 | MtrunA17_Chr5g0432471 | 26.054 | 261 | 140 | 8 | 363 | 600 | 5 | 235 | 2.68e-11 | 66.2 |
MsaG033899 | MtrunA17_Chr6g0453711 | 23.431 | 239 | 159 | 7 | 367 | 601 | 107 | 325 | 4.58e-11 | 65.9 |
MsaG033899 | MtrunA17_Chr6g0453681 | 29.614 | 233 | 125 | 9 | 370 | 592 | 19 | 222 | 5.18e-11 | 65.5 |
MsaG033899 | MtrunA17_Chr8g0346081 | 28.326 | 233 | 117 | 9 | 367 | 583 | 14 | 212 | 5.79e-11 | 65.1 |
MsaG033899 | MtrunA17_Chr5g0441011 | 27.468 | 233 | 141 | 6 | 367 | 593 | 10 | 220 | 7.39e-11 | 64.7 |
MsaG033899 | MtrunA17_Chr8g0346071 | 27.556 | 225 | 129 | 9 | 367 | 583 | 14 | 212 | 9.61e-11 | 64.3 |
MsaG033899 | MtrunA17_Chr1g0157131 | 28.755 | 233 | 129 | 9 | 359 | 583 | 67 | 270 | 9.77e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG033899 | AT1G73450.1 | 80.272 | 294 | 41 | 2 | 291 | 584 | 766 | 1042 | 3.65e-159 | 486 |
MsaG033899 | AT1G73450.1 | 55.303 | 264 | 91 | 4 | 20 | 283 | 266 | 502 | 7.53e-81 | 276 |
MsaG033899 | AT1G73460.2 | 83.094 | 278 | 34 | 1 | 307 | 584 | 795 | 1059 | 2.32e-158 | 484 |
MsaG033899 | AT1G73460.2 | 58.712 | 264 | 86 | 3 | 20 | 283 | 267 | 507 | 1.51e-81 | 278 |
MsaG033899 | AT1G73460.1 | 83.094 | 278 | 34 | 1 | 307 | 584 | 795 | 1059 | 2.32e-158 | 484 |
MsaG033899 | AT1G73460.1 | 58.712 | 264 | 86 | 3 | 20 | 283 | 267 | 507 | 1.51e-81 | 278 |
MsaG033899 | AT3G17750.1 | 82.374 | 278 | 36 | 1 | 307 | 584 | 764 | 1028 | 9.34e-157 | 479 |
MsaG033899 | AT3G17750.1 | 54.044 | 272 | 97 | 4 | 22 | 290 | 271 | 517 | 3.88e-69 | 243 |
MsaG033899 | AT2G40120.1 | 63.230 | 291 | 85 | 2 | 293 | 583 | 193 | 461 | 2.76e-122 | 373 |
MsaG033899 | AT5G35980.2 | 40.092 | 217 | 111 | 4 | 369 | 583 | 121 | 320 | 4.11e-38 | 150 |
MsaG033899 | AT5G35980.1 | 40.092 | 217 | 111 | 4 | 369 | 583 | 121 | 320 | 5.04e-38 | 151 |
MsaG033899 | AT5G35980.3 | 40.092 | 217 | 111 | 4 | 369 | 583 | 86 | 285 | 6.93e-38 | 150 |
MsaG033899 | AT4G32660.2 | 33.074 | 257 | 130 | 6 | 353 | 585 | 52 | 290 | 1.06e-32 | 129 |
MsaG033899 | AT1G13350.1 | 34.156 | 243 | 136 | 6 | 362 | 597 | 434 | 659 | 1.13e-32 | 134 |
MsaG033899 | AT3G25840.1 | 33.878 | 245 | 130 | 7 | 365 | 595 | 612 | 838 | 1.84e-32 | 134 |
MsaG033899 | AT1G13350.2 | 34.156 | 243 | 136 | 6 | 362 | 597 | 461 | 686 | 1.86e-32 | 134 |
MsaG033899 | AT4G32660.3 | 33.074 | 257 | 130 | 6 | 353 | 585 | 44 | 282 | 1.87e-32 | 129 |
MsaG033899 | AT4G32660.1 | 33.074 | 257 | 130 | 6 | 353 | 585 | 52 | 290 | 1.90e-32 | 129 |
MsaG033899 | AT3G25840.2 | 33.878 | 245 | 130 | 7 | 365 | 595 | 350 | 576 | 2.31e-32 | 133 |
MsaG033899 | AT1G13350.3 | 34.156 | 243 | 136 | 6 | 362 | 597 | 507 | 732 | 3.77e-32 | 132 |
MsaG033899 | AT4G24740.3 | 31.783 | 258 | 133 | 6 | 353 | 585 | 79 | 318 | 2.26e-31 | 125 |
MsaG033899 | AT4G24740.7 | 31.783 | 258 | 133 | 6 | 353 | 585 | 41 | 280 | 4.86e-31 | 125 |
MsaG033899 | AT4G24740.1 | 31.783 | 258 | 133 | 6 | 353 | 585 | 79 | 318 | 5.80e-31 | 125 |
MsaG033899 | AT4G24740.4 | 31.373 | 255 | 132 | 6 | 353 | 582 | 79 | 315 | 4.83e-30 | 120 |
MsaG033899 | AT4G24740.5 | 32.189 | 233 | 117 | 5 | 376 | 585 | 1 | 215 | 3.60e-29 | 116 |
MsaG033899 | AT3G53640.1 | 32.794 | 247 | 136 | 6 | 362 | 595 | 315 | 544 | 4.21e-29 | 122 |
MsaG033899 | AT4G24740.6 | 32.189 | 233 | 117 | 5 | 376 | 585 | 1 | 215 | 1.19e-28 | 117 |
MsaG033899 | AT4G24740.9 | 32.189 | 233 | 117 | 5 | 376 | 585 | 1 | 215 | 1.19e-28 | 117 |
MsaG033899 | AT4G24740.2 | 32.189 | 233 | 117 | 5 | 376 | 585 | 1 | 215 | 1.19e-28 | 117 |
MsaG033899 | AT3G53570.1 | 30.233 | 258 | 137 | 5 | 353 | 585 | 98 | 337 | 1.75e-28 | 119 |
MsaG033899 | AT3G53570.4 | 30.233 | 258 | 137 | 5 | 353 | 585 | 98 | 337 | 1.75e-28 | 119 |
MsaG033899 | AT3G53570.2 | 30.233 | 258 | 137 | 5 | 353 | 585 | 98 | 337 | 1.75e-28 | 119 |
MsaG033899 | AT3G53570.3 | 30.233 | 258 | 137 | 5 | 353 | 585 | 84 | 323 | 1.85e-28 | 119 |
MsaG033899 | AT3G53570.5 | 30.233 | 258 | 137 | 5 | 353 | 585 | 84 | 323 | 1.85e-28 | 119 |
MsaG033899 | AT4G32660.4 | 38.562 | 153 | 68 | 3 | 455 | 585 | 30 | 178 | 6.18e-24 | 102 |
MsaG033899 | AT3G18040.1 | 31.004 | 229 | 123 | 8 | 367 | 583 | 20 | 225 | 6.39e-21 | 97.1 |
MsaG033899 | AT3G18040.5 | 31.004 | 229 | 123 | 8 | 367 | 583 | 15 | 220 | 6.45e-21 | 97.1 |
MsaG033899 | AT5G19010.1 | 30.568 | 229 | 124 | 8 | 367 | 583 | 22 | 227 | 6.95e-21 | 97.1 |
MsaG033899 | AT3G18040.4 | 31.004 | 229 | 123 | 8 | 367 | 583 | 129 | 334 | 1.22e-20 | 96.7 |
MsaG033899 | AT3G18040.3 | 31.004 | 229 | 123 | 8 | 367 | 583 | 129 | 334 | 2.10e-20 | 95.9 |
MsaG033899 | AT1G53510.1 | 30.736 | 231 | 121 | 9 | 367 | 583 | 22 | 227 | 6.28e-20 | 94.4 |
MsaG033899 | AT1G18150.3 | 30.131 | 229 | 125 | 8 | 367 | 583 | 101 | 306 | 1.06e-19 | 93.6 |
MsaG033899 | AT1G18150.2 | 30.131 | 229 | 125 | 8 | 367 | 583 | 101 | 306 | 1.06e-19 | 93.6 |
MsaG033899 | AT1G18150.1 | 30.131 | 229 | 125 | 8 | 367 | 583 | 101 | 306 | 1.06e-19 | 93.6 |
MsaG033899 | AT3G14720.1 | 31.169 | 231 | 120 | 9 | 367 | 583 | 22 | 227 | 2.09e-19 | 92.8 |
MsaG033899 | AT3G14720.2 | 31.169 | 231 | 120 | 9 | 367 | 583 | 22 | 227 | 8.07e-19 | 89.7 |
MsaG033899 | AT3G14720.3 | 31.169 | 231 | 120 | 9 | 367 | 583 | 22 | 227 | 8.07e-19 | 89.7 |
MsaG033899 | AT3G61160.6 | 29.911 | 224 | 123 | 8 | 370 | 584 | 109 | 307 | 8.98e-19 | 89.0 |
MsaG033899 | AT2G42880.1 | 30.131 | 229 | 125 | 8 | 367 | 583 | 22 | 227 | 9.18e-19 | 90.5 |
MsaG033899 | AT3G61160.3 | 29.911 | 224 | 123 | 8 | 370 | 584 | 102 | 300 | 1.06e-18 | 88.6 |
MsaG033899 | AT4G24740.10 | 42.857 | 105 | 37 | 2 | 504 | 585 | 8 | 112 | 1.25e-18 | 85.5 |
MsaG033899 | AT4G24740.8 | 42.857 | 105 | 37 | 2 | 504 | 585 | 8 | 112 | 1.25e-18 | 85.5 |
MsaG033899 | AT2G42880.2 | 30.131 | 229 | 125 | 8 | 367 | 583 | 22 | 227 | 1.27e-18 | 89.4 |
MsaG033899 | AT3G61160.5 | 29.911 | 224 | 123 | 8 | 370 | 584 | 102 | 300 | 1.39e-18 | 88.6 |
MsaG033899 | AT3G61160.2 | 29.911 | 224 | 123 | 8 | 370 | 584 | 109 | 307 | 1.73e-18 | 89.0 |
MsaG033899 | AT2G01450.3 | 29.130 | 230 | 128 | 8 | 367 | 584 | 13 | 219 | 2.08e-18 | 89.0 |
MsaG033899 | AT2G01450.1 | 29.130 | 230 | 128 | 8 | 367 | 584 | 13 | 219 | 2.08e-18 | 89.0 |
MsaG033899 | AT2G01450.2 | 29.130 | 230 | 128 | 8 | 367 | 584 | 13 | 219 | 2.08e-18 | 89.0 |
MsaG033899 | AT2G01450.4 | 29.130 | 230 | 128 | 8 | 367 | 584 | 13 | 219 | 2.08e-18 | 89.0 |
MsaG033899 | AT3G61160.1 | 29.911 | 224 | 123 | 8 | 370 | 584 | 102 | 300 | 2.28e-18 | 88.6 |
MsaG033899 | AT1G73670.1 | 29.694 | 229 | 126 | 8 | 367 | 583 | 87 | 292 | 2.58e-18 | 89.0 |
MsaG033899 | AT3G61160.4 | 29.911 | 224 | 123 | 8 | 370 | 584 | 102 | 300 | 2.73e-18 | 88.2 |
MsaG033899 | AT5G14640.1 | 31.050 | 219 | 125 | 8 | 370 | 583 | 74 | 271 | 3.41e-18 | 87.8 |
MsaG033899 | AT5G14640.2 | 31.050 | 219 | 125 | 8 | 370 | 583 | 74 | 271 | 3.41e-18 | 87.8 |
MsaG033899 | AT4G18710.2 | 30.137 | 219 | 127 | 7 | 370 | 583 | 34 | 231 | 3.64e-18 | 85.5 |
MsaG033899 | AT4G18710.1 | 28.692 | 237 | 134 | 8 | 361 | 583 | 22 | 237 | 4.62e-18 | 87.0 |
MsaG033899 | AT4G00720.1 | 25.291 | 344 | 191 | 13 | 255 | 583 | 43 | 335 | 4.87e-18 | 87.8 |
MsaG033899 | AT4G11330.1 | 29.577 | 213 | 122 | 6 | 376 | 582 | 49 | 239 | 6.18e-18 | 86.7 |
MsaG033899 | AT4G01370.1 | 30.986 | 213 | 119 | 6 | 376 | 582 | 49 | 239 | 2.86e-17 | 84.3 |
MsaG033899 | AT2G46070.1 | 29.524 | 210 | 128 | 5 | 376 | 583 | 47 | 238 | 4.56e-17 | 84.0 |
MsaG033899 | AT2G46070.2 | 29.524 | 210 | 128 | 5 | 376 | 583 | 47 | 238 | 5.10e-17 | 82.8 |
MsaG033899 | AT1G01560.4 | 31.925 | 213 | 117 | 7 | 376 | 582 | 46 | 236 | 5.85e-17 | 82.0 |
MsaG033899 | AT1G01560.1 | 31.925 | 213 | 117 | 7 | 376 | 582 | 46 | 236 | 5.85e-17 | 82.0 |
MsaG033899 | AT2G46070.3 | 29.524 | 210 | 128 | 5 | 376 | 583 | 81 | 272 | 5.88e-17 | 84.0 |
MsaG033899 | AT2G30980.1 | 28.270 | 237 | 135 | 8 | 361 | 583 | 54 | 269 | 6.25e-17 | 84.0 |
MsaG033899 | AT1G01560.2 | 31.925 | 213 | 117 | 7 | 376 | 582 | 46 | 236 | 8.79e-17 | 82.8 |
MsaG033899 | AT1G01560.3 | 31.925 | 213 | 117 | 7 | 376 | 582 | 46 | 236 | 9.21e-17 | 82.4 |
MsaG033899 | AT1G09840.3 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.7 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.10 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.6 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.4 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.1 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.9 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.5 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.8 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT1G09840.2 | 30.047 | 213 | 123 | 7 | 376 | 583 | 89 | 280 | 9.79e-17 | 83.2 |
MsaG033899 | AT2G38490.1 | 32.000 | 250 | 126 | 12 | 364 | 598 | 22 | 242 | 1.16e-16 | 83.2 |
MsaG033899 | AT2G34180.1 | 29.278 | 263 | 129 | 11 | 363 | 600 | 50 | 280 | 2.38e-16 | 82.8 |
MsaG033899 | AT2G43790.1 | 28.311 | 219 | 113 | 8 | 376 | 580 | 69 | 257 | 2.78e-16 | 81.6 |
MsaG033899 | AT3G45640.1 | 29.187 | 209 | 124 | 7 | 376 | 580 | 44 | 232 | 3.12e-16 | 81.3 |
MsaG033899 | AT3G59790.1 | 28.959 | 221 | 109 | 9 | 376 | 580 | 66 | 254 | 7.28e-16 | 80.5 |
MsaG033899 | AT5G01810.1 | 30.544 | 239 | 133 | 8 | 363 | 593 | 5 | 218 | 1.42e-15 | 79.7 |
MsaG033899 | AT5G01810.2 | 30.544 | 239 | 133 | 8 | 363 | 593 | 5 | 218 | 1.42e-15 | 79.7 |
MsaG033899 | AT5G01810.3 | 30.544 | 239 | 133 | 8 | 363 | 593 | 5 | 218 | 2.29e-15 | 78.6 |
MsaG033899 | AT3G18040.2 | 35.507 | 138 | 65 | 5 | 458 | 583 | 12 | 137 | 2.52e-15 | 79.0 |
MsaG033899 | AT2G17530.2 | 34.810 | 158 | 89 | 3 | 367 | 523 | 35 | 179 | 3.05e-15 | 78.2 |
MsaG033899 | AT1G07880.1 | 30.000 | 210 | 125 | 8 | 374 | 580 | 37 | 227 | 3.24e-15 | 76.3 |
MsaG033899 | AT1G07880.2 | 30.000 | 210 | 125 | 8 | 374 | 580 | 37 | 227 | 3.39e-15 | 78.2 |
MsaG033899 | AT1G09840.11 | 44.681 | 94 | 47 | 4 | 494 | 583 | 61 | 153 | 4.32e-15 | 76.6 |
MsaG033899 | AT2G17530.1 | 33.728 | 169 | 96 | 4 | 358 | 523 | 24 | 179 | 5.85e-15 | 77.8 |
MsaG033899 | AT2G17530.3 | 33.728 | 169 | 96 | 4 | 358 | 523 | 24 | 179 | 5.85e-15 | 77.8 |
MsaG033899 | AT4G13020.5 | 30.233 | 215 | 131 | 8 | 369 | 580 | 3 | 201 | 6.64e-15 | 77.8 |
MsaG033899 | AT4G13020.8 | 30.233 | 215 | 131 | 8 | 369 | 580 | 3 | 201 | 1.03e-14 | 76.6 |
MsaG033899 | AT1G71530.1 | 25.974 | 231 | 145 | 7 | 376 | 601 | 153 | 362 | 2.42e-14 | 76.6 |
MsaG033899 | AT4G30960.1 | 28.400 | 250 | 140 | 9 | 363 | 601 | 17 | 238 | 3.74e-14 | 75.5 |
MsaG033899 | AT2G30360.1 | 28.279 | 244 | 134 | 9 | 363 | 593 | 14 | 229 | 4.09e-14 | 75.1 |
MsaG033899 | AT2G25090.1 | 24.521 | 261 | 147 | 8 | 363 | 602 | 8 | 239 | 6.86e-14 | 74.7 |
MsaG033899 | AT2G38620.2 | 27.232 | 224 | 149 | 6 | 369 | 585 | 3 | 219 | 7.42e-14 | 73.2 |
MsaG033899 | AT1G18040.1 | 28.251 | 223 | 127 | 10 | 366 | 581 | 8 | 204 | 8.64e-14 | 73.9 |
MsaG033899 | AT4G10010.2 | 27.706 | 231 | 141 | 9 | 376 | 601 | 162 | 371 | 9.89e-14 | 74.7 |
MsaG033899 | AT1G71530.2 | 25.974 | 231 | 145 | 7 | 376 | 601 | 153 | 362 | 1.58e-13 | 73.6 |
MsaG033899 | AT1G50240.3 | 28.700 | 223 | 120 | 8 | 370 | 583 | 6 | 198 | 2.15e-13 | 74.3 |
MsaG033899 | AT1G50240.2 | 28.700 | 223 | 120 | 8 | 370 | 583 | 6 | 198 | 2.15e-13 | 74.3 |
MsaG033899 | AT4G26890.1 | 34.211 | 114 | 69 | 3 | 472 | 585 | 87 | 194 | 2.42e-13 | 72.8 |
MsaG033899 | AT5G57630.2 | 29.204 | 226 | 120 | 8 | 368 | 583 | 10 | 205 | 2.86e-13 | 72.4 |
MsaG033899 | AT1G71530.3 | 25.974 | 231 | 145 | 7 | 376 | 601 | 153 | 362 | 3.11e-13 | 72.4 |
MsaG033899 | AT5G57630.1 | 29.204 | 226 | 120 | 8 | 368 | 583 | 10 | 205 | 4.94e-13 | 71.6 |
MsaG033899 | AT1G08650.2 | 38.235 | 102 | 60 | 2 | 485 | 584 | 112 | 212 | 5.35e-13 | 70.1 |
MsaG033899 | AT1G08650.1 | 38.235 | 102 | 60 | 2 | 485 | 584 | 112 | 212 | 5.38e-13 | 70.5 |
MsaG033899 | AT5G45820.1 | 28.696 | 230 | 125 | 9 | 365 | 583 | 7 | 208 | 5.45e-13 | 71.6 |
MsaG033899 | AT1G53570.6 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 5.49e-13 | 72.0 |
MsaG033899 | AT1G53570.7 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 6.06e-13 | 72.0 |
MsaG033899 | AT1G54610.1 | 25.417 | 240 | 153 | 9 | 367 | 601 | 115 | 333 | 6.65e-13 | 72.0 |
MsaG033899 | AT1G54610.3 | 25.417 | 240 | 153 | 9 | 367 | 601 | 115 | 333 | 6.65e-13 | 72.0 |
MsaG033899 | AT1G54610.2 | 25.417 | 240 | 153 | 9 | 367 | 601 | 115 | 333 | 6.65e-13 | 72.0 |
MsaG033899 | AT5G10930.1 | 29.880 | 251 | 134 | 11 | 365 | 602 | 7 | 228 | 6.72e-13 | 71.6 |
MsaG033899 | AT1G53570.1 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 8.02e-13 | 71.6 |
MsaG033899 | AT3G05050.3 | 24.675 | 231 | 148 | 7 | 376 | 601 | 144 | 353 | 8.33e-13 | 71.6 |
MsaG033899 | AT3G05050.2 | 24.675 | 231 | 148 | 7 | 376 | 601 | 144 | 353 | 8.33e-13 | 71.6 |
MsaG033899 | AT3G05050.1 | 24.675 | 231 | 148 | 7 | 376 | 601 | 144 | 353 | 8.33e-13 | 71.6 |
MsaG033899 | AT1G53570.2 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 8.44e-13 | 71.6 |
MsaG033899 | AT1G53570.3 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 8.44e-13 | 71.6 |
MsaG033899 | AT1G53570.4 | 30.841 | 214 | 121 | 10 | 374 | 582 | 218 | 409 | 8.74e-13 | 71.6 |
MsaG033899 | AT5G55090.1 | 31.304 | 115 | 73 | 3 | 472 | 585 | 88 | 197 | 1.13e-12 | 70.9 |
MsaG033899 | AT2G38620.3 | 27.232 | 224 | 149 | 6 | 369 | 585 | 3 | 219 | 1.14e-12 | 68.9 |
MsaG033899 | AT2G38620.1 | 27.232 | 224 | 149 | 6 | 369 | 585 | 3 | 219 | 1.14e-12 | 68.9 |
MsaG033899 | AT1G71530.4 | 26.761 | 213 | 130 | 7 | 376 | 583 | 153 | 344 | 1.46e-12 | 70.1 |
MsaG033899 | AT1G30270.2 | 27.236 | 246 | 139 | 8 | 368 | 601 | 29 | 246 | 1.73e-12 | 70.5 |
MsaG033899 | AT1G30270.1 | 27.236 | 246 | 139 | 8 | 368 | 601 | 29 | 246 | 1.84e-12 | 70.5 |
MsaG033899 | AT4G29810.1 | 41.837 | 98 | 51 | 3 | 490 | 583 | 168 | 263 | 2.06e-12 | 69.3 |
MsaG033899 | AT2G42550.1 | 37.736 | 106 | 49 | 4 | 490 | 583 | 115 | 215 | 2.48e-12 | 68.9 |
MsaG033899 | AT2G34290.1 | 34.426 | 122 | 69 | 3 | 488 | 598 | 105 | 226 | 2.59e-12 | 67.8 |
MsaG033899 | AT5G39440.1 | 27.778 | 234 | 135 | 8 | 366 | 592 | 15 | 221 | 2.63e-12 | 69.7 |
MsaG033899 | AT1G66750.1 | 27.386 | 241 | 142 | 11 | 369 | 602 | 12 | 226 | 2.98e-12 | 68.9 |
MsaG033899 | AT4G29810.2 | 41.837 | 98 | 51 | 3 | 490 | 583 | 177 | 272 | 3.07e-12 | 68.9 |
MsaG033899 | AT5G25110.1 | 27.419 | 248 | 143 | 8 | 365 | 602 | 38 | 258 | 3.09e-12 | 69.7 |
MsaG033899 | AT5G04510.2 | 29.545 | 132 | 70 | 3 | 480 | 590 | 126 | 255 | 3.55e-12 | 68.9 |
MsaG033899 | AT1G53050.2 | 25.974 | 231 | 145 | 8 | 376 | 601 | 140 | 349 | 3.90e-12 | 69.7 |
MsaG033899 | AT1G53050.1 | 25.974 | 231 | 145 | 8 | 376 | 601 | 140 | 349 | 3.90e-12 | 69.7 |
MsaG033899 | AT5G04510.1 | 29.545 | 132 | 70 | 3 | 480 | 590 | 126 | 255 | 4.54e-12 | 68.9 |
MsaG033899 | AT5G55090.2 | 31.304 | 115 | 73 | 3 | 472 | 585 | 150 | 259 | 4.54e-12 | 69.3 |
MsaG033899 | AT5G01820.1 | 27.572 | 243 | 141 | 8 | 368 | 601 | 20 | 236 | 5.54e-12 | 68.6 |
MsaG033899 | AT4G29810.3 | 41.837 | 98 | 51 | 3 | 490 | 583 | 177 | 272 | 5.70e-12 | 67.8 |
MsaG033899 | AT5G04510.3 | 29.545 | 132 | 70 | 3 | 480 | 590 | 126 | 255 | 7.64e-12 | 67.0 |
MsaG033899 | AT4G35500.1 | 31.646 | 158 | 94 | 3 | 367 | 523 | 35 | 179 | 8.42e-12 | 68.2 |
MsaG033899 | AT2G26980.1 | 27.917 | 240 | 131 | 9 | 367 | 593 | 11 | 221 | 9.95e-12 | 67.4 |
MsaG033899 | AT3G53030.1 | 28.402 | 169 | 105 | 4 | 358 | 523 | 28 | 183 | 1.15e-11 | 67.8 |
MsaG033899 | AT3G44850.1 | 29.299 | 157 | 97 | 3 | 368 | 523 | 43 | 186 | 1.56e-11 | 67.4 |
MsaG033899 | AT3G44850.1 | 41.538 | 65 | 37 | 1 | 527 | 591 | 319 | 382 | 2.57e-11 | 67.0 |
MsaG033899 | AT3G10540.1 | 28.788 | 132 | 71 | 3 | 480 | 590 | 127 | 256 | 1.58e-11 | 67.4 |
MsaG033899 | AT2G26980.3 | 27.917 | 240 | 131 | 9 | 367 | 593 | 11 | 221 | 1.71e-11 | 67.0 |
MsaG033899 | AT2G26980.4 | 27.917 | 240 | 131 | 9 | 367 | 593 | 21 | 231 | 1.76e-11 | 67.0 |
MsaG033899 | AT3G29160.3 | 28.452 | 239 | 128 | 9 | 366 | 592 | 16 | 223 | 2.01e-11 | 66.2 |
MsaG033899 | AT3G01085.3 | 30.469 | 128 | 82 | 3 | 479 | 601 | 205 | 330 | 2.90e-11 | 67.0 |
MsaG033899 | AT3G01085.1 | 30.469 | 128 | 82 | 3 | 479 | 601 | 205 | 330 | 3.16e-11 | 66.6 |
MsaG033899 | AT3G01085.2 | 30.469 | 128 | 82 | 3 | 479 | 601 | 205 | 330 | 3.16e-11 | 66.6 |
MsaG033899 | AT1G14000.1 | 31.293 | 147 | 87 | 5 | 446 | 583 | 221 | 362 | 3.19e-11 | 66.2 |
MsaG033899 | AT4G38470.2 | 31.915 | 141 | 86 | 5 | 446 | 583 | 348 | 481 | 3.54e-11 | 66.6 |
MsaG033899 | AT1G01140.1 | 27.197 | 239 | 132 | 8 | 368 | 593 | 17 | 226 | 3.58e-11 | 66.2 |
MsaG033899 | AT4G38470.1 | 31.915 | 141 | 86 | 5 | 446 | 583 | 348 | 481 | 3.66e-11 | 66.6 |
MsaG033899 | AT1G01140.2 | 27.197 | 239 | 132 | 8 | 368 | 593 | 17 | 226 | 3.76e-11 | 66.2 |
MsaG033899 | AT3G29160.1 | 28.452 | 239 | 128 | 9 | 366 | 592 | 16 | 223 | 3.85e-11 | 66.2 |
MsaG033899 | AT3G29160.2 | 28.452 | 239 | 128 | 9 | 366 | 592 | 16 | 223 | 3.85e-11 | 66.2 |
MsaG033899 | AT4G38470.3 | 31.915 | 141 | 86 | 5 | 446 | 583 | 348 | 481 | 3.85e-11 | 66.2 |
MsaG033899 | AT2G26980.5 | 27.917 | 240 | 131 | 9 | 367 | 593 | 11 | 221 | 4.66e-11 | 65.9 |
MsaG033899 | AT5G35410.2 | 28.444 | 225 | 127 | 9 | 367 | 583 | 8 | 206 | 4.70e-11 | 65.5 |
MsaG033899 | AT1G01140.3 | 27.197 | 239 | 132 | 8 | 368 | 593 | 17 | 226 | 4.84e-11 | 65.9 |
MsaG033899 | AT3G08730.1 | 24.889 | 225 | 141 | 5 | 370 | 590 | 134 | 334 | 7.34e-11 | 65.1 |
MsaG033899 | AT3G08730.2 | 24.889 | 225 | 141 | 5 | 370 | 590 | 134 | 334 | 7.34e-11 | 65.1 |
MsaG033899 | AT5G22840.1 | 29.936 | 157 | 96 | 3 | 368 | 523 | 43 | 186 | 7.76e-11 | 65.5 |
MsaG033899 | AT5G35410.1 | 28.444 | 225 | 127 | 9 | 367 | 583 | 8 | 206 | 8.60e-11 | 65.1 |
Find 130 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAGTTTGAAAATATTTA+TGG | 0.116726 | 6:+101911781 | None:intergenic |
GCTGACAGCTCTTTACTTAT+TGG | 0.146422 | 6:-101920888 | MsaT033899.1:CDS |
TTGATTATCCAAATGAATAT+TGG | 0.229575 | 6:-101919494 | MsaT033899.1:CDS |
CAAATTCATCTTCTGATGTT+TGG | 0.231968 | 6:-101921221 | MsaT033899.1:CDS |
TTTACTTATTGGATCATATC+TGG | 0.234260 | 6:-101920877 | MsaT033899.1:CDS |
CTTGAAGCCGGAGAATATTT+TGG | 0.238296 | 6:-101912030 | MsaT033899.1:CDS |
CTATCATGTCACCGAGTATC+TGG | 0.243442 | 6:-101916788 | MsaT033899.1:CDS |
ATAAGCCGTTGACTATTAAT+TGG | 0.257446 | 6:-101920956 | MsaT033899.1:CDS |
TCTGAAGAAAACAGTCTTGA+TGG | 0.263411 | 6:+101921188 | None:intergenic |
CATAAATTCAACAGAGAATC+AGG | 0.285719 | 6:-101916071 | MsaT033899.1:CDS |
GTCAATTACCATTCAATGTT+TGG | 0.292705 | 6:-101912096 | MsaT033899.1:CDS |
TGATTATCCAAATGAATATT+GGG | 0.333788 | 6:-101919493 | MsaT033899.1:CDS |
GAAAAGAGAAAGCTAGAAAT+TGG | 0.340936 | 6:-101921155 | MsaT033899.1:CDS |
TTGATCGTCATCCTCCTCTT+TGG | 0.346868 | 6:+101919314 | None:intergenic |
GTGCACAATCTTTAGATTGA+AGG | 0.352847 | 6:+101918343 | None:intergenic |
CTTCACAATGCCAAGGTTGC+AGG | 0.354539 | 6:-101916036 | MsaT033899.1:intron |
GAAGAGGATTCTTATTTCTC+TGG | 0.365779 | 6:-101919282 | MsaT033899.1:CDS |
CGTGCTCCTGAGGTTATTCT+CGG | 0.367843 | 6:-101911909 | MsaT033899.1:CDS |
TCAGAGTCCCAATATTCATT+TGG | 0.374608 | 6:+101919486 | None:intergenic |
TCTTTCTGTTGTTGCACTGC+AGG | 0.376816 | 6:-101916144 | MsaT033899.1:CDS |
ATTACAAGGGAAGATGAATT+AGG | 0.381616 | 6:-101918446 | MsaT033899.1:CDS |
CGTAGGAATGGTGAAATTTA+CGG | 0.385152 | 6:-101920029 | MsaT033899.1:intron |
TCATATCTGGATGTACCTAT+TGG | 0.385509 | 6:-101920864 | MsaT033899.1:CDS |
GGACCTCTTTCCTGAGGATC+TGG | 0.410492 | 6:+101919339 | None:intergenic |
ATGACGACGACGACGATGTT+GGG | 0.411245 | 6:-101919458 | MsaT033899.1:CDS |
ATCTGGAACGCTTCCATGCC+CGG | 0.417630 | 6:+101919356 | None:intergenic |
AGAGCAGGTAAGGCAAATAA+AGG | 0.436416 | 6:-101918387 | MsaT033899.1:CDS |
TTTATGAAACTCGTATAAGT+TGG | 0.441775 | 6:+101916088 | None:intergenic |
CTTCAGTATTTACATAACCT+TGG | 0.444556 | 6:-101912068 | MsaT033899.1:CDS |
TACCCTAGTGACAATGAAAA+GGG | 0.444820 | 6:-101919381 | MsaT033899.1:CDS |
AGAGCATGTCAAGCTAGAAA+TGG | 0.445560 | 6:-101918486 | MsaT033899.1:CDS |
ACTCCACAAACCTGCAACCT+TGG | 0.445960 | 6:+101916026 | None:intergenic |
TATGTCGAAAAGCGTGATCC+TGG | 0.446339 | 6:-101916637 | MsaT033899.1:CDS |
GTTGTTCAGAACTGGCTTTG+AGG | 0.456121 | 6:-101916857 | MsaT033899.1:intron |
AGCGAGAAGTTTGAATCTGA+TGG | 0.456420 | 6:-101920933 | MsaT033899.1:CDS |
TTTGCTCATTTGTTCAGTCC+AGG | 0.457959 | 6:-101911938 | MsaT033899.1:CDS |
CGATCAATCTTTCGCTGAAG+AGG | 0.462595 | 6:-101919298 | MsaT033899.1:CDS |
ATGCAGGTCATGAGCTTGTA+TGG | 0.463457 | 6:+101916744 | None:intergenic |
ATGACAAGAAGATTGATATC+TGG | 0.466209 | 6:-101911878 | MsaT033899.1:CDS |
AAAGAGCAGGTGGATGAAGT+GGG | 0.466670 | 6:-101921113 | MsaT033899.1:CDS |
TTAGGTATGAGGAAGGCTAC+AGG | 0.471617 | 6:-101919612 | MsaT033899.1:intron |
TCGTCATCCTCCTCTTTGGC+AGG | 0.473408 | 6:+101919318 | None:intergenic |
CTGGTCCCTTGGATGCATCT+TGG | 0.473461 | 6:-101911859 | MsaT033899.1:CDS |
GAAGTTTGAATCTGATGGAT+TGG | 0.475357 | 6:-101920928 | MsaT033899.1:CDS |
CTTCTGTGCAAGAGCAGGTA+AGG | 0.480601 | 6:-101918397 | MsaT033899.1:CDS |
AAGATTGATATCTGGTCCCT+TGG | 0.481494 | 6:-101911870 | MsaT033899.1:CDS |
TATGACGACGACGACGATGT+TGG | 0.483600 | 6:-101919459 | MsaT033899.1:CDS |
AATGAAAAGGGGACCGGGCA+TGG | 0.484331 | 6:-101919369 | MsaT033899.1:CDS |
TTACCCTAGTGACAATGAAA+AGG | 0.491800 | 6:-101919382 | MsaT033899.1:CDS |
AAAAGAGCAGGTGGATGAAG+TGG | 0.493164 | 6:-101921114 | MsaT033899.1:CDS |
GGTAAGGCAAATAAAGGCTC+AGG | 0.493775 | 6:-101918381 | MsaT033899.1:CDS |
AACCAGGCCTCATCCTCAAT+AGG | 0.494298 | 6:+101919423 | None:intergenic |
AAGTGCTTCCAAACATTGAA+TGG | 0.497818 | 6:+101912088 | None:intergenic |
ATGAAGAAGTTGACATTACA+AGG | 0.499940 | 6:-101918460 | MsaT033899.1:CDS |
GCAAATAAAGGCTCAGGAGG+AGG | 0.504551 | 6:-101918375 | MsaT033899.1:CDS |
TGATGGATTGGCTACTAAGC+TGG | 0.505269 | 6:-101920916 | MsaT033899.1:CDS |
GATTGCTTCTGTGCAAGAGC+AGG | 0.514712 | 6:-101918402 | MsaT033899.1:CDS |
TGGAAGCGTTCCAGATCCTC+AGG | 0.518189 | 6:-101919349 | MsaT033899.1:CDS |
AGCTAGAAATTGGTGGTGCA+AGG | 0.519333 | 6:-101921145 | MsaT033899.1:CDS |
GAGGTGAAGGTCATTGATCT+TGG | 0.522315 | 6:-101911987 | MsaT033899.1:CDS |
TGAGGAGTTTGATCTCATCA+AGG | 0.522969 | 6:+101916662 | None:intergenic |
GTTCTGAACAGAATAACATC+GGG | 0.530083 | 6:-101921058 | MsaT033899.1:CDS |
AGCAGAAGGAAGAGTATCCA+TGG | 0.533713 | 6:-101921007 | MsaT033899.1:CDS |
ATCTTGGCAGAACTTTGTAC+TGG | 0.534669 | 6:-101911843 | MsaT033899.1:CDS |
CTCAGGAGCACGATAGGACC+TGG | 0.537644 | 6:+101911920 | None:intergenic |
TTCTGCTTCTCCAATGCAAG+CGG | 0.537774 | 6:+101921023 | None:intergenic |
AGTTGCAATGTATTAGTCCA+AGG | 0.538351 | 6:+101912051 | None:intergenic |
CAAGCTCATGACCTGCATAC+AGG | 0.543444 | 6:-101916739 | MsaT033899.1:CDS |
TTGGCAGGACCTCTTTCCTG+AGG | 0.546000 | 6:+101919333 | None:intergenic |
TATCATGTCACCGAGTATCT+GGG | 0.549601 | 6:-101916787 | MsaT033899.1:CDS |
AGTGACAATGAAAAGGGGAC+CGG | 0.556126 | 6:-101919375 | MsaT033899.1:CDS |
TGCAGCAGAACCCAGATACT+CGG | 0.556358 | 6:+101916777 | None:intergenic |
AAAATGTGATACTTGTCTCC+AGG | 0.560708 | 6:+101916619 | None:intergenic |
GAGACAACCTATTGAGGATG+AGG | 0.563826 | 6:-101919430 | MsaT033899.1:CDS |
AAACATCCACACCTGTATGC+AGG | 0.563940 | 6:+101916728 | None:intergenic |
AATAACCTCAGGAGCACGAT+AGG | 0.565802 | 6:+101911914 | None:intergenic |
TTCCTACGCTCCGCTATAGC+GGG | 0.567514 | 6:+101920044 | None:intergenic |
TCGCTCCAATTAATAGTCAA+CGG | 0.569420 | 6:+101920951 | None:intergenic |
AACCTATTGAGGATGAGGCC+TGG | 0.570582 | 6:-101919425 | MsaT033899.1:CDS |
TAGGTATGAGGAAGGCTACA+GGG | 0.571899 | 6:-101919611 | MsaT033899.1:CDS |
AGCCGCGCCACCCGCTATAG+CGG | 0.573456 | 6:-101920054 | MsaT033899.1:CDS |
TGAATTAGGTGTTTCACAAG+AGG | 0.578790 | 6:-101918432 | MsaT033899.1:CDS |
GTTCTGCCAAGATGCATCCA+AGG | 0.579553 | 6:+101911853 | None:intergenic |
CTCCGCTATAGCGGGTGGCG+CGG | 0.579682 | 6:+101920052 | None:intergenic |
AATACATTGCAACTTGAAGC+CGG | 0.581247 | 6:-101912042 | MsaT033899.1:CDS |
AAGAGCAGGTGGATGAAGTG+GGG | 0.585593 | 6:-101921112 | MsaT033899.1:CDS |
GTTCCAGATCCTCAGGAAAG+AGG | 0.586649 | 6:-101919342 | MsaT033899.1:CDS |
GGAAAGAGGTCCTGCCAAAG+AGG | 0.586977 | 6:-101919328 | MsaT033899.1:CDS |
GGCTTATATAAAAGAGCAGG+TGG | 0.587248 | 6:-101921123 | MsaT033899.1:CDS |
GTGCTCCTGAGGTTATTCTC+GGG | 0.587936 | 6:-101911908 | MsaT033899.1:CDS |
GCTATAGCGGAGCGTAGGAA+TGG | 0.599165 | 6:-101920041 | MsaT033899.1:CDS |
GTTCAGAACTGGCTTTGAGG+AGG | 0.600690 | 6:-101916854 | MsaT033899.1:intron |
GTGACAATGAAAAGGGGACC+GGG | 0.600870 | 6:-101919374 | MsaT033899.1:CDS |
TCAATCTAAAGATTGTGCAC+AGG | 0.604639 | 6:-101918340 | MsaT033899.1:CDS |
GCTTGCATTGGAGAAGCAGA+AGG | 0.605553 | 6:-101921021 | MsaT033899.1:CDS |
GCTAGAAATTGGTGGTGCAA+GGG | 0.607551 | 6:-101921144 | MsaT033899.1:CDS |
AAGGGCTTATATAAAAGAGC+AGG | 0.609052 | 6:-101921126 | MsaT033899.1:CDS |
ATTCCTACGCTCCGCTATAG+CGG | 0.610350 | 6:+101920043 | None:intergenic |
AAGAGGTCCTGCCAAAGAGG+AGG | 0.616143 | 6:-101919325 | MsaT033899.1:CDS |
AAGGCAAATAAAGGCTCAGG+AGG | 0.617382 | 6:-101918378 | MsaT033899.1:CDS |
AAGAGAAAGCTAGAAATTGG+TGG | 0.617612 | 6:-101921152 | MsaT033899.1:CDS |
AGGTATGAGGAAGGCTACAG+GGG | 0.617750 | 6:-101919610 | MsaT033899.1:CDS |
CTACAGCCGATGTGAGGTGA+AGG | 0.619012 | 6:-101912000 | MsaT033899.1:CDS |
AGTTGGCTGTCTGTTAGTCA+AGG | 0.620743 | 6:-101919585 | MsaT033899.1:CDS |
AAAATCTGATACAAGATCAG+AGG | 0.624467 | 6:+101919548 | None:intergenic |
CAGGTCCTATCGTGCTCCTG+AGG | 0.625226 | 6:-101911919 | MsaT033899.1:CDS |
AGTTCTGAACAGAATAACAT+CGG | 0.628340 | 6:-101921059 | MsaT033899.1:CDS |
AATTCAACAGAGAATCAGGA+GGG | 0.629021 | 6:-101916067 | MsaT033899.1:CDS |
TTCTGCCAAGATGCATCCAA+GGG | 0.630562 | 6:+101911854 | None:intergenic |
CTACGCTCCGCTATAGCGGG+TGG | 0.637539 | 6:+101920047 | None:intergenic |
GAAAGCCCGAGAATAACCTC+AGG | 0.637971 | 6:+101911903 | None:intergenic |
GTACATGAGACAACCTATTG+AGG | 0.638206 | 6:-101919436 | MsaT033899.1:CDS |
TAAAAGCTACAGCCGATGTG+AGG | 0.648020 | 6:-101912006 | MsaT033899.1:CDS |
AAGTGTACTTCACAATGCCA+AGG | 0.649789 | 6:-101916043 | MsaT033899.1:CDS |
ACAGCGTCAGACGATCCTAT+CGG | 0.655788 | 6:-101919231 | MsaT033899.1:intron |
TGGACTGAACAAATGAGCAA+AGG | 0.656403 | 6:+101911940 | None:intergenic |
TTACAGAATTTAAAACAACA+TGG | 0.659407 | 6:+101916821 | None:intergenic |
CACCCGCTATAGCGGAGCGT+AGG | 0.670258 | 6:-101920046 | MsaT033899.1:CDS |
GATACTCGGTGACATGATAG+CGG | 0.673261 | 6:+101916791 | None:intergenic |
TGTTAGTCAAGGAATATCAG+AGG | 0.674279 | 6:-101919574 | MsaT033899.1:CDS |
ATTCAACAGAGAATCAGGAG+GGG | 0.674312 | 6:-101916066 | MsaT033899.1:CDS |
TAAAATTATAAAGAACAACA+AGG | 0.674441 | 6:-101916701 | MsaT033899.1:CDS |
AAATTCAACAGAGAATCAGG+AGG | 0.684821 | 6:-101916068 | MsaT033899.1:CDS |
CAATGACCTTCACCTCACAT+CGG | 0.686191 | 6:+101911994 | None:intergenic |
ACCCTAGTGACAATGAAAAG+GGG | 0.691112 | 6:-101919380 | MsaT033899.1:CDS |
TTCTGAACAGAATAACATCG+GGG | 0.704854 | 6:-101921057 | MsaT033899.1:CDS |
TCTGAACAGAATAACATCGG+GGG | 0.706118 | 6:-101921056 | MsaT033899.1:CDS |
TGAAGAAGTTGACATTACAA+GGG | 0.707878 | 6:-101918459 | MsaT033899.1:CDS |
GGTATGAGGAAGGCTACAGG+GGG | 0.710161 | 6:-101919609 | MsaT033899.1:CDS |
TCATGACCTGCATACAGGTG+TGG | 0.733624 | 6:-101916734 | MsaT033899.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 101911782 | 101921252 | 101911782 | ID=MsaG033899 |
Chr6 | mRNA | 101911782 | 101921252 | 101911782 | ID=MsaT033899.1;Parent=MsaG033899 |
Chr6 | exon | 101911782 | 101912117 | 101911782 | ID=MsaT033899.1.exon7;Parent=MsaT033899.1 |
Chr6 | CDS | 101911782 | 101912117 | 101911782 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101916037 | 101916208 | 101916037 | ID=MsaT033899.1.exon6;Parent=MsaT033899.1 |
Chr6 | CDS | 101916037 | 101916208 | 101916037 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101916616 | 101916870 | 101916616 | ID=MsaT033899.1.exon5;Parent=MsaT033899.1 |
Chr6 | CDS | 101916616 | 101916870 | 101916616 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101918332 | 101918506 | 101918332 | ID=MsaT033899.1.exon4;Parent=MsaT033899.1 |
Chr6 | CDS | 101918332 | 101918506 | 101918332 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101919232 | 101919630 | 101919232 | ID=MsaT033899.1.exon3;Parent=MsaT033899.1 |
Chr6 | CDS | 101919232 | 101919630 | 101919232 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101920030 | 101920092 | 101920030 | ID=MsaT033899.1.exon2;Parent=MsaT033899.1 |
Chr6 | CDS | 101920030 | 101920092 | 101920030 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Chr6 | exon | 101920844 | 101921252 | 101920844 | ID=MsaT033899.1.exon1;Parent=MsaT033899.1 |
Chr6 | CDS | 101920844 | 101921252 | 101920844 | ID=cds.MsaT033899.1;Parent=MsaT033899.1 |
Gene Sequence |
Protein sequence |