AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG034511

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG034511 MtrunA17_Chr6g0486661 97.108 1072 17 1 1 1058 1 1072 0.0 2137
MsaG034511 MtrunA17_Chr4g0066371 63.399 306 109 3 80 385 42 344 8.28e-131 402
MsaG034511 MtrunA17_Chr2g0286951 63.158 304 109 2 80 383 43 343 1.69e-128 397
MsaG034511 MtrunA17_Chr1g0183651 28.354 328 183 8 741 1020 114 437 1.24e-35 143
MsaG034511 MtrunA17_Chr7g0261491 28.814 354 194 11 741 1041 114 462 2.14e-35 143
MsaG034511 MtrunA17_Chr1g0167311 28.169 355 201 9 716 1020 83 433 1.05e-34 140
MsaG034511 MtrunA17_Chr4g0059751 38.372 172 101 3 841 1009 191 360 2.54e-34 137
MsaG034511 MtrunA17_Chr7g0245031 39.535 172 99 3 841 1009 243 412 1.50e-33 135
MsaG034511 MtrunA17_Chr1g0167351 29.167 312 165 9 760 1020 123 429 1.59e-33 137
MsaG034511 MtrunA17_Chr1g0192421 29.936 314 171 7 90 379 60 348 1.10e-32 130
MsaG034511 MtrunA17_Chr1g0187581 28.296 311 168 9 760 1020 130 435 1.24e-32 134
MsaG034511 MtrunA17_Chr3g0135951 27.900 319 167 9 760 1020 107 420 8.61e-32 131
MsaG034511 MtrunA17_Chr7g0272061 28.875 329 170 7 90 382 62 362 8.64e-32 128
MsaG034511 MtrunA17_Chr2g0295401 26.866 335 192 7 75 384 50 356 4.18e-31 126
MsaG034511 MtrunA17_Chr1g0153321 24.235 425 261 10 658 1029 21 437 1.37e-30 127
MsaG034511 MtrunA17_Chr6g0478601 29.254 335 195 7 737 1032 101 432 3.45e-30 126
MsaG034511 MtrunA17_Chr4g0067711 26.562 320 183 7 89 384 64 355 1.72e-28 118
MsaG034511 MtrunA17_Chr2g0324061 31.429 315 157 12 106 383 73 365 6.03e-28 119
MsaG034511 MtrunA17_Chr4g0030361 27.586 319 186 9 738 1020 300 609 1.34e-27 119
MsaG034511 MtrunA17_Chr2g0299781 25.466 322 179 8 760 1024 126 443 1.47e-27 118
MsaG034511 MtrunA17_Chr4g0018201 27.879 330 202 5 738 1032 750 1078 2.25e-27 120
MsaG034511 MtrunA17_Chr1g0151781 30.483 269 143 7 97 343 42 288 4.30e-27 114
MsaG034511 MtrunA17_Chr5g0428981 27.879 330 202 5 738 1032 754 1082 5.00e-27 119
MsaG034511 MtrunA17_Chr7g0243571 26.866 335 184 12 97 394 65 375 5.74e-27 115
MsaG034511 MtrunA17_Chr7g0249421 28.035 346 176 11 105 397 77 402 7.14e-27 116
MsaG034511 MtrunA17_Chr4g0022171 29.841 315 163 9 106 383 79 372 9.77e-27 115
MsaG034511 MtrunA17_Chr7g0221691 25.904 332 178 7 106 392 111 419 2.92e-26 113
MsaG034511 MtrunA17_Chr8g0342431 27.744 328 164 10 106 382 68 373 4.04e-26 112
MsaG034511 MtrunA17_Chr4g0004971 26.752 314 182 6 97 382 51 344 5.83e-26 110
MsaG034511 MtrunA17_Chr2g0327561 26.667 330 190 8 740 1024 621 943 1.03e-25 114
MsaG034511 MtrunA17_Chr8g0369091 26.446 363 218 10 714 1034 567 922 1.20e-25 114
MsaG034511 MtrunA17_Chr2g0312641 27.179 390 203 11 699 1020 43 419 6.97e-24 106
MsaG034511 MtrunA17_Chr2g0329011 30.870 230 105 7 841 1023 113 335 1.58e-23 103
MsaG034511 MtrunA17_Chr1g0150451 30.350 257 135 9 124 379 108 321 3.89e-23 102
MsaG034511 MtrunA17_Chr3g0136711 29.779 272 146 10 124 394 65 292 6.41e-23 100
MsaG034511 MtrunA17_Chr1g0212961 31.418 261 129 11 124 382 126 338 1.05e-22 100
MsaG034511 MtrunA17_Chr8g0353621 30.075 266 165 8 744 1000 7 260 5.17e-22 97.1
MsaG034511 MtrunA17_Chr1g0197721 28.571 329 212 7 731 1042 34 356 2.04e-21 99.4
MsaG034511 MtrunA17_Chr8g0351491 30.075 266 165 8 744 1000 13 266 3.68e-21 94.7
MsaG034511 MtrunA17_Chr5g0407161 28.369 282 148 10 124 396 124 360 3.67e-20 94.0
MsaG034511 MtrunA17_Chr1g0194191 28.477 302 141 12 124 405 118 364 7.30e-20 93.2
MsaG034511 MtrunA17_Chr3g0125381 35.152 165 98 4 841 1001 47 206 9.46e-20 89.4
MsaG034511 MtrunA17_Chr2g0279151 29.183 257 138 12 124 379 65 278 1.63e-19 90.1
MsaG034511 MtrunA17_Chr4g0065141 26.866 335 156 14 124 444 124 383 3.00e-19 91.3
MsaG034511 MtrunA17_Chr2g0317021 29.344 259 139 11 124 381 117 332 6.55e-19 89.4
MsaG034511 MtrunA17_Chr2g0321101 42.373 118 63 4 896 1010 318 433 8.49e-19 90.9
MsaG034511 MtrunA17_Chr2g0284011 25.820 244 166 8 765 1001 31 266 9.23e-19 90.5
MsaG034511 MtrunA17_Chr1g0205421 26.449 276 173 9 741 1001 6 266 5.91e-18 88.2
MsaG034511 MtrunA17_Chr6g0453681 25.725 276 174 9 763 1023 30 289 6.74e-18 88.2
MsaG034511 MtrunA17_Chr8g0379091 26.481 287 190 11 744 1021 23 297 9.10e-18 87.8
MsaG034511 MtrunA17_Chr6g0468751 25.984 254 161 7 763 1001 30 271 9.60e-18 87.8
MsaG034511 MtrunA17_Chr7g0274941 29.680 219 136 7 793 1000 62 273 9.88e-18 85.1
MsaG034511 MtrunA17_Chr1g0188031 27.935 247 160 6 765 1001 39 277 1.25e-17 87.0
MsaG034511 MtrunA17_Chr7g0272841 29.730 222 141 5 776 989 108 322 3.21e-17 87.0
MsaG034511 MtrunA17_Chr1g0179101 33.544 158 96 5 866 1020 669 820 4.01e-17 87.0
MsaG034511 MtrunA17_Chr3g0126511 28.077 260 143 9 124 382 125 341 4.29e-17 84.3
MsaG034511 MtrunA17_Chr7g0266031 34.899 149 88 5 875 1020 700 842 5.08e-17 86.7
MsaG034511 MtrunA17_Chr2g0302431 25.468 267 186 6 742 1001 15 275 5.63e-17 85.1
MsaG034511 MtrunA17_Chr4g0032761 35.915 142 73 6 897 1035 249 375 8.20e-17 84.3
MsaG034511 MtrunA17_Chr8g0356291 22.905 358 181 11 757 1028 139 487 1.02e-16 84.7
MsaG034511 MtrunA17_Chr4g0063311 36.496 137 72 4 896 1022 327 458 1.54e-16 84.0
MsaG034511 MtrunA17_Chr7g0244521 26.000 250 168 7 763 1001 23 266 1.93e-16 83.6
MsaG034511 MtrunA17_Chr4g0013131 27.049 244 163 8 765 1001 31 266 4.02e-16 82.4
MsaG034511 MtrunA17_Chr3g0107011 24.576 236 164 7 773 1001 40 268 6.15e-16 82.0
MsaG034511 MtrunA17_Chr4g0051661 26.953 256 144 10 124 379 183 395 6.83e-16 81.3
MsaG034511 MtrunA17_Chr6g0453671 30.061 163 107 4 841 1001 114 271 1.04e-15 80.5
MsaG034511 MtrunA17_Chr5g0430481 26.708 322 174 12 70 381 105 374 1.93e-15 79.7
MsaG034511 MtrunA17_Chr3g0132671 28.221 163 110 4 841 1001 144 301 1.96e-15 80.5
MsaG034511 MtrunA17_Chr7g0234641 35.537 121 72 3 895 1015 234 348 2.21e-15 79.7
MsaG034511 MtrunA17_Chr1g0150781 23.188 345 186 13 41 345 186 491 2.51e-15 80.5
MsaG034511 MtrunA17_Chr7g0250631 32.374 139 86 4 898 1033 593 726 2.63e-15 80.9
MsaG034511 MtrunA17_Chr8g0338741 36.029 136 77 5 888 1020 236 364 2.72e-15 79.7
MsaG034511 MtrunA17_Chr3g0140631 28.226 248 170 5 744 987 34 277 3.86e-15 77.4
MsaG034511 MtrunA17_Chr1g0150321 31.138 167 105 4 841 1002 107 268 5.20e-15 78.6
MsaG034511 MtrunA17_Chr8g0381091 35.156 128 74 4 898 1018 299 424 5.48e-15 79.0
MsaG034511 MtrunA17_Chr2g0290691 34.884 129 76 4 895 1020 437 560 6.02e-15 79.3
MsaG034511 MtrunA17_Chr3g0080101 34.109 129 77 4 895 1020 644 767 1.03e-14 79.0
MsaG034511 MtrunA17_Chr2g0284031 25.306 245 168 9 765 1002 50 286 1.17e-14 78.2
MsaG034511 MtrunA17_Chr2g0309421 33.071 127 80 3 898 1021 405 529 1.44e-14 78.2
MsaG034511 MtrunA17_Chr3g0112291 27.953 254 128 10 107 343 106 321 4.29e-14 75.5
MsaG034511 MtrunA17_Chr8g0335351 33.333 126 76 4 898 1020 600 720 4.51e-14 77.0
MsaG034511 MtrunA17_Chr6g0449401 34.615 130 75 5 895 1020 526 649 4.96e-14 76.6
MsaG034511 MtrunA17_Chr5g0435721 26.820 261 120 10 107 343 206 419 8.20e-14 75.5
MsaG034511 MtrunA17_Chr7g0227331 34.615 130 75 5 895 1020 465 588 8.50e-14 75.9
MsaG034511 MtrunA17_Chr5g0432471 29.221 154 99 4 853 1001 118 266 1.05e-13 75.1
MsaG034511 MtrunA17_Chr5g0432491 27.711 166 110 4 841 1001 118 278 1.10e-13 74.7
MsaG034511 MtrunA17_Chr7g0276111 26.168 321 198 14 719 1021 119 418 1.29e-13 75.1
MsaG034511 MtrunA17_Chr8g0389921 25.778 225 121 6 123 339 197 383 1.32e-13 74.3
MsaG034511 MtrunA17_Chr2g0285711 24.728 368 189 14 734 1020 64 424 1.45e-13 74.3
MsaG034511 MtrunA17_Chr3g0107051 28.161 174 115 4 833 1001 107 275 2.79e-13 73.6
MsaG034511 MtrunA17_Chr1g0190131 24.299 214 147 6 795 1000 57 263 5.13e-13 70.9
MsaG034511 MtrunA17_Chr5g0428031 29.412 170 102 6 841 1002 104 263 6.42e-13 72.4
MsaG034511 MtrunA17_Chr8g0380661 28.144 167 110 6 841 1001 95 257 8.84e-12 67.8
MsaG034511 MtrunA17_Chr7g0225501 28.044 271 144 13 83 337 45 280 9.75e-12 68.6
MsaG034511 MtrunA17_Chr1g0209451 26.708 322 170 16 79 381 23 297 4.09e-11 66.6
MsaG034511 MtrunA17_Chr5g0424531 32.374 139 85 4 853 986 123 257 4.73e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG034511 AT2G20050.1 65.732 1106 319 13 1 1058 1 1094 0.0 1441
MsaG034511 AT2G20050.2 65.642 1106 317 14 1 1058 1 1091 0.0 1434
MsaG034511 AT3G06270.1 60.458 306 118 2 80 385 44 346 1.61e-123 382
MsaG034511 AT3G23310.1 26.757 370 214 9 703 1020 76 440 7.89e-35 141
MsaG034511 AT5G26010.1 32.215 298 165 7 106 388 56 331 2.21e-34 135
MsaG034511 AT4G14350.2 28.939 311 166 9 760 1020 132 437 1.39e-33 137
MsaG034511 AT4G14350.1 28.939 311 166 9 760 1020 132 437 1.39e-33 137
MsaG034511 AT4G14350.4 28.939 311 166 9 760 1020 132 437 1.39e-33 137
MsaG034511 AT4G14350.3 28.939 311 166 9 760 1020 132 437 1.40e-33 137
MsaG034511 AT3G08720.1 31.022 274 178 6 742 1009 135 403 1.00e-32 134
MsaG034511 AT3G08720.3 31.022 274 178 6 742 1009 135 403 1.00e-32 134
MsaG034511 AT3G08720.4 31.022 274 178 6 742 1009 135 403 1.00e-32 134
MsaG034511 AT3G08720.2 31.022 274 178 6 742 1009 135 403 1.00e-32 134
MsaG034511 AT3G08730.1 39.306 173 97 4 841 1009 229 397 1.29e-32 133
MsaG034511 AT3G08730.2 39.306 173 97 4 841 1009 229 397 1.29e-32 133
MsaG034511 AT1G03920.2 28.049 328 184 8 741 1020 18 341 1.94e-32 132
MsaG034511 AT5G27930.1 29.097 299 167 6 106 379 74 352 4.24e-32 129
MsaG034511 AT5G27930.2 29.097 299 167 6 106 379 74 352 4.24e-32 129
MsaG034511 AT4G32950.1 30.796 289 172 7 106 387 55 322 5.24e-32 128
MsaG034511 AT1G03920.1 28.395 324 178 10 768 1042 158 476 6.04e-32 132
MsaG034511 AT1G03920.3 28.395 324 178 10 768 1042 158 476 6.04e-32 132
MsaG034511 AT2G20470.3 27.922 308 171 8 760 1020 137 440 1.64e-30 128
MsaG034511 AT2G20470.2 27.922 308 171 8 760 1020 137 440 2.84e-30 127
MsaG034511 AT2G20470.1 27.922 308 171 8 760 1020 137 440 2.84e-30 127
MsaG034511 AT3G05640.2 29.897 291 165 6 106 377 75 345 1.10e-29 122
MsaG034511 AT3G05640.1 29.897 291 165 6 106 377 75 345 1.10e-29 122
MsaG034511 AT3G05640.3 29.897 291 165 6 106 377 75 345 1.10e-29 122
MsaG034511 AT1G16220.1 28.875 329 170 8 97 381 68 376 2.48e-29 124
MsaG034511 AT2G19400.1 25.620 363 207 9 706 1009 64 422 6.11e-29 123
MsaG034511 AT1G45160.1 29.129 333 200 7 740 1038 663 993 6.94e-29 125
MsaG034511 AT5G58140.6 28.235 340 196 10 737 1034 567 900 6.99e-29 125
MsaG034511 AT5G58140.7 28.235 340 196 10 737 1034 567 900 6.99e-29 125
MsaG034511 AT5G58140.5 28.235 340 196 10 737 1034 567 900 6.99e-29 125
MsaG034511 AT5G58140.2 28.235 340 196 10 737 1034 567 900 6.99e-29 125
MsaG034511 AT5G58140.1 28.235 340 196 10 737 1034 567 900 6.99e-29 125
MsaG034511 AT1G45160.2 29.129 333 200 7 740 1038 663 993 8.31e-29 125
MsaG034511 AT5G01700.1 28.289 304 166 7 106 382 11 289 8.64e-29 119
MsaG034511 AT4G03415.1 30.063 316 162 9 106 383 80 374 1.34e-28 121
MsaG034511 AT4G03415.3 30.063 316 162 9 106 383 80 374 1.34e-28 121
MsaG034511 AT4G03415.2 30.063 316 162 9 106 383 80 374 1.34e-28 121
MsaG034511 AT3G16800.2 28.707 317 185 5 80 379 54 346 1.67e-28 118
MsaG034511 AT3G16800.1 28.707 317 185 5 80 379 54 346 1.67e-28 118
MsaG034511 AT3G16800.3 28.707 317 185 5 80 379 54 346 1.67e-28 118
MsaG034511 AT3G17850.1 26.203 374 230 7 698 1032 837 1203 2.16e-28 124
MsaG034511 AT5G01700.2 28.289 304 166 7 106 382 60 338 4.05e-28 118
MsaG034511 AT3G10540.1 30.293 307 191 7 731 1020 28 328 7.03e-28 119
MsaG034511 AT5G58140.3 28.481 316 181 9 737 1013 567 876 1.26e-27 121
MsaG034511 AT5G04510.2 29.967 307 192 7 731 1020 27 327 1.55e-27 117
MsaG034511 AT1G30640.3 26.347 334 187 9 741 1020 21 349 1.63e-27 118
MsaG034511 AT1G48490.4 27.586 348 220 6 716 1032 798 1144 1.93e-27 121
MsaG034511 AT1G48490.3 27.586 348 220 6 716 1032 797 1143 2.00e-27 121
MsaG034511 AT1G48490.2 27.586 348 220 6 716 1032 797 1143 2.00e-27 121
MsaG034511 AT1G48490.1 27.586 348 220 6 716 1032 797 1143 2.00e-27 121
MsaG034511 AT5G62310.1 28.097 331 197 6 740 1032 747 1074 2.33e-27 120
MsaG034511 AT1G30640.2 26.347 334 187 9 741 1020 114 442 3.68e-27 118
MsaG034511 AT1G30640.1 26.347 334 187 9 741 1020 114 442 3.68e-27 118
MsaG034511 AT4G33080.2 26.254 339 188 9 740 1020 87 421 4.19e-27 117
MsaG034511 AT5G04510.1 29.967 307 192 7 731 1020 27 327 5.25e-27 116
MsaG034511 AT4G33080.1 26.254 339 188 9 740 1020 87 421 5.29e-27 117
MsaG034511 AT1G03590.1 31.847 314 156 10 106 383 73 364 5.75e-27 116
MsaG034511 AT5G27930.3 30.000 260 137 5 106 340 74 313 6.44e-27 113
MsaG034511 AT5G09890.1 26.168 321 181 7 741 1009 96 412 7.37e-27 116
MsaG034511 AT5G09890.2 26.168 321 181 7 741 1009 96 412 7.37e-27 116
MsaG034511 AT3G16800.4 28.519 270 157 4 127 379 1 251 1.55e-25 107
MsaG034511 AT3G16800.6 28.519 270 157 4 127 379 1 251 1.55e-25 107
MsaG034511 AT5G36250.1 27.139 339 176 9 106 395 80 396 1.85e-25 111
MsaG034511 AT1G79630.6 33.906 233 128 7 185 414 111 320 2.20e-25 110
MsaG034511 AT1G79630.3 33.906 233 128 7 185 414 111 320 2.20e-25 110
MsaG034511 AT1G79630.4 33.906 233 128 7 185 414 111 320 2.20e-25 110
MsaG034511 AT1G79630.5 33.906 233 128 7 185 414 111 320 2.20e-25 110
MsaG034511 AT5G10740.1 31.660 259 133 9 124 381 64 279 2.35e-25 109
MsaG034511 AT5G10740.2 31.660 259 133 9 124 381 64 279 2.35e-25 109
MsaG034511 AT4G32950.2 32.609 230 129 6 106 330 55 263 3.80e-25 107
MsaG034511 AT1G79630.2 33.906 233 128 7 185 414 151 360 4.36e-25 110
MsaG034511 AT1G79630.7 33.906 233 128 7 185 414 151 360 4.36e-25 110
MsaG034511 AT1G79630.8 33.473 239 133 7 179 414 211 426 6.00e-25 110
MsaG034511 AT1G78200.5 31.008 258 135 11 124 379 19 235 6.60e-25 105
MsaG034511 AT1G78200.4 31.008 258 135 11 124 379 19 235 6.60e-25 105
MsaG034511 AT1G79630.1 33.473 239 133 7 179 414 215 430 6.80e-25 110
MsaG034511 AT4G31750.2 30.502 259 136 9 124 381 64 279 8.18e-25 106
MsaG034511 AT4G31750.1 30.502 259 136 9 124 381 64 279 1.28e-24 106
MsaG034511 AT4G31750.3 30.502 259 136 9 124 381 64 279 1.28e-24 106
MsaG034511 AT1G78200.1 31.008 258 135 11 124 379 64 280 1.78e-24 105
MsaG034511 AT1G78200.3 31.008 258 135 11 124 379 64 280 1.78e-24 105
MsaG034511 AT1G78200.2 31.008 258 135 11 124 379 64 280 1.78e-24 105
MsaG034511 AT3G02750.2 31.718 227 132 7 174 398 205 410 1.87e-23 105
MsaG034511 AT3G02750.1 31.718 227 132 7 174 398 205 410 1.87e-23 105
MsaG034511 AT3G45780.2 28.012 332 185 10 736 1024 652 972 3.08e-23 107
MsaG034511 AT3G45780.1 28.012 332 185 10 736 1024 652 972 3.08e-23 107
MsaG034511 AT4G13000.1 31.507 219 90 6 841 1007 118 328 7.87e-23 102
MsaG034511 AT3G14370.1 26.124 356 203 7 720 1019 60 411 9.94e-23 103
MsaG034511 AT2G20630.1 29.961 257 136 11 124 379 63 276 1.34e-22 99.8
MsaG034511 AT5G24940.1 30.739 257 134 9 124 379 64 277 2.01e-22 102
MsaG034511 AT5G36250.2 26.346 353 175 10 106 395 80 410 2.28e-22 102
MsaG034511 AT2G20630.2 29.688 256 136 11 124 378 63 275 9.33e-22 97.4
MsaG034511 AT1G53700.1 25.656 343 189 8 736 1020 82 416 2.00e-21 99.4
MsaG034511 AT2G45490.1 28.839 267 169 8 744 1001 19 273 6.49e-21 94.7
MsaG034511 AT3G25250.1 29.958 237 98 9 841 1017 121 349 7.17e-21 97.1
MsaG034511 AT2G34650.1 28.980 245 110 6 841 1026 177 416 1.14e-20 96.7
MsaG034511 AT1G34750.2 27.027 259 145 10 124 381 66 281 1.17e-20 94.0
MsaG034511 AT1G34750.1 27.027 259 145 10 124 381 66 281 1.17e-20 94.0
MsaG034511 AT1G34750.3 27.027 259 145 10 124 381 66 281 1.17e-20 94.0
MsaG034511 AT4G28400.3 29.183 257 138 11 124 379 45 258 1.70e-20 92.8
MsaG034511 AT5G39440.1 24.809 262 176 5 751 1003 23 272 2.47e-20 96.3
MsaG034511 AT3G51470.2 26.950 282 152 9 124 396 62 298 3.76e-20 93.2
MsaG034511 AT5G36250.3 28.309 272 128 7 106 330 80 331 3.83e-20 94.0
MsaG034511 AT4G28400.1 29.183 257 138 11 124 379 67 280 4.88e-20 92.0
MsaG034511 AT2G45490.2 29.388 245 155 7 744 979 19 254 7.05e-20 90.9
MsaG034511 AT3G51470.1 26.950 282 152 9 124 396 106 342 7.98e-20 93.2
MsaG034511 AT1G51170.1 27.753 227 103 5 841 1009 125 348 3.25e-19 92.0
MsaG034511 AT1G22280.1 26.429 280 159 11 104 379 42 278 9.19e-19 88.2
MsaG034511 AT3G29160.3 25.725 276 178 8 729 1001 21 272 2.07e-18 89.0
MsaG034511 AT1G07160.1 26.686 341 179 13 55 381 93 376 2.59e-18 89.0
MsaG034511 AT3G02750.3 27.481 262 132 8 174 398 205 445 5.12e-18 89.4
MsaG034511 AT3G52890.2 37.984 129 72 4 895 1020 772 895 5.76e-18 90.1
MsaG034511 AT3G52890.4 37.984 129 72 4 895 1020 772 895 5.76e-18 90.1
MsaG034511 AT3G52890.1 37.984 129 72 4 895 1020 772 895 5.76e-18 90.1
MsaG034511 AT3G52890.3 37.984 129 72 4 895 1020 772 895 5.76e-18 90.1
MsaG034511 AT5G01810.1 26.531 245 163 9 765 1001 31 266 5.89e-18 88.2
MsaG034511 AT5G01810.2 26.531 245 163 9 765 1001 31 266 5.89e-18 88.2
MsaG034511 AT5G01810.3 26.423 246 164 9 765 1002 31 267 6.36e-18 87.4
MsaG034511 AT3G29160.1 25.725 276 178 8 729 1001 21 272 7.35e-18 88.6
MsaG034511 AT3G29160.2 25.725 276 178 8 729 1001 21 272 7.35e-18 88.6
MsaG034511 AT1G67820.2 32.489 237 111 10 124 352 115 310 8.49e-18 87.8
MsaG034511 AT3G01090.3 30.270 185 118 6 841 1023 114 289 1.19e-17 88.2
MsaG034511 AT3G01090.1 30.270 185 118 6 841 1023 114 289 1.19e-17 88.2
MsaG034511 AT1G67820.1 32.489 237 111 10 124 352 151 346 1.29e-17 87.4
MsaG034511 AT3G01090.2 30.270 185 118 6 841 1023 137 312 1.34e-17 88.2
MsaG034511 AT5G03640.2 31.515 165 101 5 863 1020 735 894 1.37e-17 89.0
MsaG034511 AT5G03640.1 31.515 165 101 5 863 1020 735 894 1.37e-17 89.0
MsaG034511 AT3G06030.1 28.897 263 168 8 741 987 60 319 1.43e-17 88.6
MsaG034511 AT5G25110.1 28.378 222 148 5 773 987 69 286 1.57e-17 87.4
MsaG034511 AT5G04510.3 28.030 264 172 5 731 979 27 287 1.65e-17 85.1
MsaG034511 AT3G23000.1 26.071 280 192 7 731 1002 9 281 2.17e-17 86.7
MsaG034511 AT2G25620.1 26.119 268 145 9 124 379 128 354 3.35e-17 85.5
MsaG034511 AT2G25620.2 26.119 268 145 9 124 379 128 354 3.35e-17 85.5
MsaG034511 AT3G44610.1 41.026 117 64 4 896 1009 307 421 3.60e-17 86.3
MsaG034511 AT1G09000.2 31.343 201 128 5 794 986 121 319 3.62e-17 87.0
MsaG034511 AT1G09000.1 31.343 201 128 5 794 986 121 319 3.62e-17 87.0
MsaG034511 AT2G36350.1 34.437 151 86 6 873 1020 774 914 6.19e-17 87.0
MsaG034511 AT5G45820.1 26.531 245 165 8 765 1002 31 267 7.02e-17 85.1
MsaG034511 AT1G54960.1 28.800 250 156 9 794 1027 120 363 1.27e-16 85.5
MsaG034511 AT1G54960.2 28.800 250 156 9 794 1027 120 363 1.27e-16 85.5
MsaG034511 AT5G47750.1 37.209 129 73 4 895 1020 420 543 1.35e-16 85.1
MsaG034511 AT2G33700.1 26.038 265 142 8 124 379 123 342 1.58e-16 83.2
MsaG034511 AT4G32830.1 29.032 248 168 5 744 987 28 271 1.83e-16 81.6
MsaG034511 AT5G10930.1 30.047 213 136 6 783 987 49 256 1.96e-16 84.0
MsaG034511 AT4G30960.1 30.516 213 127 7 843 1050 120 316 3.47e-16 82.8
MsaG034511 AT2G34180.1 24.911 281 191 11 742 1014 52 320 3.54e-16 83.2
MsaG034511 AT4G14580.1 27.273 275 174 8 742 1002 16 278 3.82e-16 82.8
MsaG034511 AT5G40030.1 35.659 129 76 4 898 1024 340 463 3.89e-16 83.2
MsaG034511 AT2G25880.1 28.629 248 169 6 745 988 23 266 5.60e-16 80.1
MsaG034511 AT2G25880.4 28.629 248 169 6 745 988 36 279 7.79e-16 80.1
MsaG034511 AT2G26700.1 35.915 142 78 5 896 1026 352 491 1.01e-15 82.0
MsaG034511 AT1G29230.1 23.490 298 196 9 740 1023 67 346 1.49e-15 81.6
MsaG034511 AT1G07430.1 27.234 235 121 8 123 343 156 354 1.72e-15 80.9
MsaG034511 AT2G25880.3 28.629 248 169 6 745 988 84 327 1.97e-15 79.7
MsaG034511 AT3G12690.1 32.308 130 83 3 895 1021 402 529 8.69e-15 79.3
MsaG034511 AT3G12690.3 32.308 130 83 3 895 1021 402 529 8.69e-15 79.3
MsaG034511 AT3G12690.2 32.308 130 83 3 895 1021 402 529 8.69e-15 79.3
MsaG034511 AT4G24400.2 24.719 267 184 8 743 1001 5 262 1.33e-14 77.8
MsaG034511 AT4G24400.1 24.719 267 184 8 743 1001 5 262 1.45e-14 77.8
MsaG034511 AT5G55910.2 34.921 126 74 4 898 1020 342 462 2.01e-14 77.8
MsaG034511 AT5G55910.1 34.921 126 74 4 898 1020 342 462 2.01e-14 77.8
MsaG034511 AT2G26980.1 25.000 268 188 7 741 1001 8 269 2.02e-14 77.0
MsaG034511 AT3G17510.2 28.743 167 109 5 841 1002 35 196 2.27e-14 76.6
MsaG034511 AT4G26610.1 34.109 129 77 4 895 1020 349 472 2.58e-14 77.4
MsaG034511 AT1G79250.1 32.283 127 81 3 898 1021 376 500 2.66e-14 77.8
MsaG034511 AT1G79250.3 32.283 127 81 3 898 1021 376 500 2.66e-14 77.8
MsaG034511 AT1G79250.2 32.283 127 81 3 898 1021 376 500 2.66e-14 77.8
MsaG034511 AT1G79250.4 32.283 127 81 3 898 1021 376 500 2.66e-14 77.8
MsaG034511 AT3G20830.1 36.752 117 68 3 895 1009 237 349 2.66e-14 76.6
MsaG034511 AT2G44830.2 30.714 140 89 4 896 1032 591 725 3.46e-14 77.8
MsaG034511 AT2G44830.3 30.714 140 89 4 896 1032 591 725 3.46e-14 77.8
MsaG034511 AT2G44830.1 30.714 140 89 4 896 1032 591 725 3.46e-14 77.8
MsaG034511 AT2G26980.5 25.000 268 188 7 741 1001 8 269 3.76e-14 76.6
MsaG034511 AT4G18700.1 25.153 326 219 12 735 1047 14 327 3.79e-14 77.0
MsaG034511 AT3G27580.2 31.206 141 92 3 895 1032 409 547 4.43e-14 77.0
MsaG034511 AT3G27580.1 31.206 141 92 3 895 1032 409 547 4.43e-14 77.0
MsaG034511 AT1G48260.2 29.518 166 107 4 841 1001 21 181 4.51e-14 75.5
MsaG034511 AT1G48260.4 29.518 166 107 4 841 1001 21 181 4.51e-14 75.5
MsaG034511 AT1G48260.3 29.518 166 107 4 841 1001 21 181 4.51e-14 75.5
MsaG034511 AT1G48260.5 29.518 166 107 4 841 1001 21 181 4.51e-14 75.5
MsaG034511 AT2G26980.3 25.000 268 188 7 741 1001 8 269 4.98e-14 76.3
MsaG034511 AT2G26980.4 25.000 268 188 7 741 1001 18 279 6.13e-14 75.9
MsaG034511 AT3G17510.1 28.743 167 109 5 841 1002 115 276 6.48e-14 75.9
MsaG034511 AT1G16440.1 30.769 130 85 3 895 1021 329 456 8.54e-14 75.9
MsaG034511 AT1G48260.1 29.341 167 108 4 841 1002 106 267 1.01e-13 75.1
MsaG034511 AT5G35410.2 31.288 163 102 5 843 1001 108 264 1.54e-13 74.3
MsaG034511 AT2G30360.1 28.144 167 108 5 841 1001 117 277 1.79e-13 74.3
MsaG034511 AT5G35410.1 31.288 163 102 5 843 1001 108 264 2.61e-13 73.9
MsaG034511 AT3G04530.1 29.586 169 109 5 841 1004 109 272 5.11e-13 71.2
MsaG034511 AT1G34750.4 27.143 210 114 9 124 332 66 237 5.34e-13 70.5
MsaG034511 AT2G26980.2 24.696 247 176 6 741 980 8 251 6.10e-13 70.9
MsaG034511 AT3G56760.1 29.240 171 107 6 841 1003 224 388 7.39e-13 73.2
MsaG034511 AT2G41140.1 26.481 287 190 11 730 1003 109 387 7.90e-13 73.2
MsaG034511 AT1G12680.1 29.940 167 104 6 841 1001 196 355 8.53e-13 72.4
MsaG034511 AT4G28400.2 28.571 210 111 10 124 332 67 238 1.86e-12 68.9
MsaG034511 AT5G07070.1 26.271 236 160 7 773 1001 38 266 2.05e-12 71.2
MsaG034511 AT1G30270.3 29.605 152 100 3 841 987 29 178 2.15e-12 70.9
MsaG034511 AT5G58380.1 24.576 236 164 7 773 1001 38 266 3.41e-12 70.5
MsaG034511 AT1G30270.2 29.605 152 100 3 841 987 126 275 3.61e-12 70.5
MsaG034511 AT1G30270.1 29.605 152 100 3 841 987 126 275 3.78e-12 70.5
MsaG034511 AT4G04720.2 24.286 280 185 10 758 1027 97 359 5.39e-12 70.1
MsaG034511 AT4G04720.1 24.286 280 185 10 758 1027 97 359 5.39e-12 70.1
MsaG034511 AT1G22280.2 32.456 114 71 3 104 213 42 153 6.35e-12 66.2
MsaG034511 AT5G18700.1 38.144 97 56 2 850 942 102 198 3.15e-11 68.6
MsaG034511 AT4G21940.1 24.345 267 181 9 771 1027 126 381 4.41e-11 67.4
MsaG034511 AT1G08650.2 25.000 252 160 9 758 1002 43 272 4.65e-11 65.5
MsaG034511 AT4G21940.2 24.345 267 181 9 771 1027 126 381 5.04e-11 67.0
MsaG034511 AT1G01140.2 27.632 152 105 3 841 987 114 265 5.04e-11 66.6
MsaG034511 AT3G16800.5 32.143 168 94 3 80 232 54 216 5.09e-11 64.7
MsaG034511 AT4G21940.3 24.345 267 181 9 771 1027 126 381 5.38e-11 67.0

Find 221 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTGCTATAACGATTT+TGG 0.168530 6:-113477361 MsaT034511.1:CDS
TTTGATGGTCATGGTGAATT+TGG 0.180201 6:-113477537 MsaT034511.1:CDS
GAAAGAGAAAGATTTGATTA+AGG 0.237597 6:-113471783 MsaT034511.1:CDS
TGAAGCTCATGTCTTGAAAT+TGG 0.240646 6:+113477852 None:intergenic
GACAAACTTGAATCAGTTAT+TGG 0.242466 6:-113472724 MsaT034511.1:CDS
GTCATCATTGTGCATATAAA+TGG 0.245189 6:-113475734 MsaT034511.1:CDS
GTTATACGAGAAATAATTTC+TGG 0.245843 6:+113470096 None:intergenic
GCGTCAGGGCTAAAAGTTTC+AGG 0.277499 6:+113470590 None:intergenic
CTATTGATCAGACACCTTAT+AGG 0.287394 6:-113477239 MsaT034511.1:CDS
TACCAATCTTCAAGCCATTC+AGG 0.288864 6:+113469994 None:intergenic
TTGATGGTCATGGTGAATTT+GGG 0.290028 6:-113477536 MsaT034511.1:CDS
AGCCTTCTTATTCCAGCTTC+AGG 0.300896 6:+113477756 None:intergenic
AAAGAGAAAGATTTGATTAA+GGG 0.304516 6:-113471782 MsaT034511.1:CDS
TCAGAATCTCCTTCCACATT+TGG 0.309097 6:-113475513 MsaT034511.1:CDS
AGTTCTTCCACCTCTTCTAA+TGG 0.321921 6:+113470024 None:intergenic
TAGCTGGTGGACTTCAGATT+TGG 0.323972 6:-113471128 MsaT034511.1:CDS
TCTAACTCATCGACCCTATA+AGG 0.324456 6:+113477225 None:intergenic
AAGCCAAACTGTGGTTGATA+TGG 0.324624 6:-113476914 MsaT034511.1:intron
CGGGCCGCGGATTCGCTAAA+AGG 0.334194 6:+113471644 None:intergenic
TGAGGATTCCTCTGCTTCTA+TGG 0.337245 6:-113470052 MsaT034511.1:CDS
AAGCCGGAGGGAAGCTATTT+CGG 0.342988 6:-113472829 MsaT034511.1:CDS
GATCTGACTCAGTTGTAAAA+TGG 0.345454 6:+113473134 None:intergenic
GACCTTGTGCAAGTCTTCTA+AGG 0.351651 6:+113471595 None:intergenic
CTACCCCAACACGGAACTTC+AGG 0.356767 6:+113477141 None:intergenic
TAAAGTCCAGCTCTCAGATT+TGG 0.358045 6:-113472336 MsaT034511.1:intron
CTGGAATAAGAAGGCTAGCC+AGG 0.358135 6:-113477749 MsaT034511.1:CDS
TATTGATCAGACACCTTATA+GGG 0.358380 6:-113477238 MsaT034511.1:CDS
ATCCTCCGCAACAGCGGTTA+AGG 0.360060 6:+113472774 None:intergenic
TATTGGTGTTGTTGCTAATC+CGG 0.373455 6:-113477013 MsaT034511.1:CDS
CAGCGGAGAATTTGAAGTCT+TGG 0.377882 6:-113474660 MsaT034511.1:CDS
TTCTCGTATAACACAATACT+TGG 0.380729 6:-113470085 MsaT034511.1:CDS
CGGTAACAAGCGGAACTCTT+TGG 0.386678 6:-113473257 MsaT034511.1:intron
CAACAGAAGCAGCACAATAT+CGG 0.391080 6:+113471624 None:intergenic
TGGTGCTAGGGTTCTTACTT+TGG 0.407163 6:-113477187 MsaT034511.1:CDS
TTAAGCTTAACTGATTCAAT+TGG 0.407541 6:+113477787 None:intergenic
GAGGATTGCGAAGGTTGATT+CGG 0.408913 6:-113477694 MsaT034511.1:CDS
TCCACTGACTGCTCTGAGAT+TGG 0.410675 6:-113472216 MsaT034511.1:CDS
GAGAGAACATTCACAATTTG+TGG 0.411209 6:-113471089 MsaT034511.1:CDS
GAATCCTGAAGTTCCGTGTT+GGG 0.411344 6:-113477145 MsaT034511.1:CDS
TGGCAGAATCTTATCGACTA+TGG 0.411588 6:-113475790 MsaT034511.1:CDS
GTACCAGGATACATTCCATT+TGG 0.417879 6:+113477075 None:intergenic
GAAATAATTTCTGGAGGAAC+GGG 0.422968 6:+113470105 None:intergenic
GCTAAAAGGAGTTGATAGTA+TGG 0.423572 6:+113471658 None:intergenic
CTAGCTCCAGAGATTGTTCT+CGG 0.425816 6:-113471053 MsaT034511.1:CDS
CAAAGAGTTAACGTCGAACC+TGG 0.427975 6:-113474903 MsaT034511.1:CDS
CTTACTTTGGATCAAATTGA+AGG 0.429552 6:-113477174 MsaT034511.1:CDS
CTCCTTGCAAAAGATTTCTC+AGG 0.434072 6:-113472701 MsaT034511.1:CDS
CAGTTGCCAAAATTGCAAAA+AGG 0.435052 6:-113470625 MsaT034511.1:CDS
GAGATGAGATCAACAGCGTC+AGG 0.437627 6:+113470575 None:intergenic
TTATGCGGCGAAATGCCATT+TGG 0.438722 6:-113470674 MsaT034511.1:CDS
ATGGTAATGCAGGTGGGCAT+TGG 0.439213 6:-113470717 MsaT034511.1:intron
CCTCGAGAATGGACAAGGTT+GGG 0.439663 6:-113475421 MsaT034511.1:CDS
GCCGCATGACAAGCCTCAAC+AGG 0.443325 6:+113477441 None:intergenic
GATTCTATTGCCGAGACTAT+TGG 0.444731 6:-113477030 MsaT034511.1:CDS
ATACTTGGAAGTTCGTTATG+AGG 0.445719 6:-113470070 MsaT034511.1:CDS
TTACCATATCAACCACAGTT+TGG 0.446662 6:+113476911 None:intergenic
TTTGCTTTATCAAGAGCATC+AGG 0.448018 6:+113477624 None:intergenic
TACCAGGATACATTCCATTT+GGG 0.448399 6:+113477076 None:intergenic
ACCTCTACAACTTGAGGGAC+AGG 0.450352 6:+113475543 None:intergenic
TGGGGATATTATAGTCAAAC+AGG 0.450714 6:-113474883 MsaT034511.1:intron
TGCATTGTACATCATCCAAA+AGG 0.455541 6:-113472971 MsaT034511.1:CDS
CCAGAGATTGTTCTCGGAAA+AGG 0.455916 6:-113471047 MsaT034511.1:CDS
TGGTAATGCAGGTGGGCATT+GGG 0.456593 6:-113470716 MsaT034511.1:intron
CCTAGGTTGTGGGTCCCAAA+TGG 0.461359 6:-113477090 MsaT034511.1:CDS
TTCTTCCACCGGATGGTTCG+AGG 0.465792 6:-113477713 MsaT034511.1:CDS
CAGTTGTAAAATGGACAATC+TGG 0.466545 6:+113473143 None:intergenic
GAGTGAAACTTTGTGGTGCT+AGG 0.466745 6:-113477200 MsaT034511.1:CDS
GCGAAATGCCATTTGGATCA+TGG 0.474372 6:-113470667 MsaT034511.1:CDS
TTCGTCGCAGTTTCTTCCAC+CGG 0.475958 6:-113477724 MsaT034511.1:CDS
AACAGAAGCAGCACAATATC+GGG 0.478712 6:+113471625 None:intergenic
TTAATTTGACAATAGGTTGA+GGG 0.480856 6:-113472405 MsaT034511.1:intron
ATTGAAAATTCCCTCGAGAA+TGG 0.481281 6:-113475432 MsaT034511.1:CDS
ATTCGGAGAAGTATGAATTA+CGG 0.482500 6:-113477677 MsaT034511.1:CDS
CCACATTTGGATGGAATGCT+AGG 0.482567 6:-113475500 MsaT034511.1:CDS
GTCTTTCTGTGAGCTGAAGA+TGG 0.484731 6:+113475393 None:intergenic
GGATCAAAGAGGACATATAC+AGG 0.486085 6:-113471427 MsaT034511.1:intron
TAGCGAATTGTGGTGATTCG+AGG 0.488526 6:-113477317 MsaT034511.1:CDS
TTTCCAAGCCGAAAGTGAAA+AGG 0.488866 6:-113471829 MsaT034511.1:CDS
GAAGCTCATGTCTTGAAATT+GGG 0.491238 6:+113477853 None:intergenic
TGTAAAGGTTCAAGCATCAA+TGG 0.492437 6:-113477879 MsaT034511.1:CDS
TTAGAAAGAGTGAAACTTTG+TGG 0.493842 6:-113477207 MsaT034511.1:CDS
GCGGTTATAGCGGAGAAGAA+AGG 0.495693 6:-113477294 MsaT034511.1:CDS
CGGTTATAGCGGAGAAGAAA+GGG 0.498264 6:-113477293 MsaT034511.1:CDS
AGCATATATGCGGTCGGCAA+AGG 0.501206 6:+113471721 None:intergenic
AGTTCAAAACTAACAATCTC+CGG 0.505891 6:+113476994 None:intergenic
TTTGCCGACCGCATATATGC+TGG 0.506404 6:-113471719 MsaT034511.1:CDS
CTTTCTGAGTGAGCGACAGC+AGG 0.507611 6:+113475588 None:intergenic
AATCTCCTTCCACATTTGGA+TGG 0.511080 6:-113475509 MsaT034511.1:CDS
TATTCACACGCCGTTTGGAA+CGG 0.512399 6:-113477586 MsaT034511.1:CDS
TAAAACATGACACTGAGATT+CGG 0.513745 6:+113474938 None:intergenic
CCCTCGAGAATGGACAAGGT+TGG 0.514225 6:-113475422 MsaT034511.1:CDS
ATGCTAGGAATCATCGTGTA+AGG 0.515227 6:-113475485 MsaT034511.1:CDS
AGGGAAGCTATTTCGGTGAA+TGG 0.515772 6:-113472822 MsaT034511.1:CDS
AAAAGTCACTCATGGTTTAA+CGG 0.515952 6:-113470162 MsaT034511.1:CDS
TGGTGATCCTCCTAGGTTGT+GGG 0.516600 6:-113477100 MsaT034511.1:CDS
CTCTTACCAAATCTGAGAGC+TGG 0.516948 6:+113472330 None:intergenic
TCGCAGTTTCTTCCACCGGA+TGG 0.517486 6:-113477720 MsaT034511.1:CDS
TGATGCTTGTGCAGCTATAG+TGG 0.519383 6:-113475810 MsaT034511.1:CDS
CTCCTTAACCGCTGTTGCGG+AGG 0.521790 6:-113472776 MsaT034511.1:CDS
GCGATGATGGTGATCCTCCT+AGG 0.525169 6:-113477107 MsaT034511.1:CDS
CATGGTTTAACGGTATCGAC+TGG 0.525650 6:-113470152 MsaT034511.1:CDS
CTTGCAAATTTAAAAGACTC+AGG 0.527756 6:-113472192 MsaT034511.1:intron
GCGGAGAAGAAAGGGAAAGA+TGG 0.530370 6:-113477285 MsaT034511.1:CDS
TGCCTGAATGGCTTGAAGAT+TGG 0.531395 6:-113469996 MsaT034511.1:CDS
AGAAATAATTTCTGGAGGAA+CGG 0.531843 6:+113470104 None:intergenic
CTGTCACCTCTACAACTTGA+GGG 0.533632 6:+113475538 None:intergenic
AGAGAACATTCACAATTTGT+GGG 0.533686 6:-113471088 MsaT034511.1:CDS
TTCGCAATCCTCGAACCATC+CGG 0.535595 6:+113477705 None:intergenic
TATCATCATTGAAGTTACTT+CGG 0.535882 6:-113473182 MsaT034511.1:CDS
AGTGATGAAGAAGGCGATGA+TGG 0.536012 6:-113477120 MsaT034511.1:CDS
TATTGTCTGTCCACTTGAGA+AGG 0.536353 6:+113473089 None:intergenic
AGTGAAACTTTGTGGTGCTA+GGG 0.540701 6:-113477199 MsaT034511.1:CDS
CCTCAAGTTGTAGAGGTGAC+AGG 0.541909 6:-113475537 MsaT034511.1:CDS
GCCACAGTTTCCCTGCCGAC+TGG 0.543216 6:-113471025 MsaT034511.1:intron
GTTCGCAGTTTGTGAAGCGT+AGG 0.543432 6:-113477506 MsaT034511.1:CDS
TTAACTAGAGATCCTGAAGC+TGG 0.544386 6:-113477768 MsaT034511.1:CDS
TCACCGAAATAGCTTCCCTC+CGG 0.546510 6:+113472826 None:intergenic
TGAGAAGGTAACTTCAGAAA+GGG 0.547498 6:+113473104 None:intergenic
CTCCTTGTAAAAGCAGTACC+AGG 0.547558 6:+113477060 None:intergenic
CAGAATGGTGTTCTGTATAG+AGG 0.547787 6:-113471474 MsaT034511.1:CDS
ATGGTGATCCTCCTAGGTTG+TGG 0.547906 6:-113477101 MsaT034511.1:CDS
ATTTGAAGTCTTGGCAACTC+AGG 0.551871 6:-113474651 MsaT034511.1:intron
AGAACTGTCAATAGAGAAGC+CGG 0.554197 6:-113472845 MsaT034511.1:CDS
ATTCTGTCAAAAGTCACTCA+TGG 0.554989 6:-113470170 MsaT034511.1:CDS
CGCTGTTGATCTCATCTCCA+AGG 0.556545 6:-113470570 MsaT034511.1:intron
GCCAATGTGTTGATCAAGAA+GGG 0.556691 6:+113472798 None:intergenic
AACATTCACAATTTGTGGGA+GGG 0.559694 6:-113471084 MsaT034511.1:CDS
TCTGAAGTTACCTTCTCAAG+TGG 0.559863 6:-113473099 MsaT034511.1:CDS
GGCTTTGTGAGAATTTATTG+AGG 0.561124 6:-113477485 MsaT034511.1:CDS
GTTTAATGTTGATCCTGTTG+AGG 0.561128 6:-113477454 MsaT034511.1:CDS
GGAGTCTCCATTAGAAGAGG+TGG 0.561309 6:-113470031 MsaT034511.1:CDS
AAGAACTTAATGTGCCTGAA+TGG 0.561879 6:-113470008 MsaT034511.1:CDS
TTACTTTGGATCAAATTGAA+GGG 0.563740 6:-113477173 MsaT034511.1:CDS
TGGCTCCTTAACCGCTGTTG+CGG 0.566815 6:-113472779 MsaT034511.1:CDS
TTGAGAAGGTAACTTCAGAA+AGG 0.567824 6:+113473103 None:intergenic
CCCTGTCCCTCAAGTTGTAG+AGG 0.568402 6:-113475544 MsaT034511.1:CDS
AAGAAACTGCGACGAAACCC+TGG 0.569078 6:+113477731 None:intergenic
TTTGGATGATGTACAATGCA+AGG 0.569188 6:+113472974 None:intergenic
GTCCCAAATGGAATGTATCC+TGG 0.572183 6:-113477078 MsaT034511.1:CDS
TCGAATTTCACCACCATCAG+AGG 0.572844 6:+113477812 None:intergenic
TGAATGTGCTTTACTAACAA+AGG 0.572873 6:-113472746 MsaT034511.1:CDS
AGCAACAACACCAATAGTCT+CGG 0.576109 6:+113477020 None:intergenic
CTTCAGCTCACAGAAAGACA+TGG 0.577211 6:-113475389 MsaT034511.1:CDS
TGCATAGGTGAAACATGTAA+AGG 0.578268 6:-113477894 MsaT034511.1:CDS
ATTTGTTCAGTTACTTGATG+TGG 0.578609 6:-113470226 MsaT034511.1:intron
CAAGTCCGACATCGAAAATG+AGG 0.578983 6:-113472890 MsaT034511.1:CDS
TCCTGTTGAGGCTTGTCATG+CGG 0.579052 6:-113477442 MsaT034511.1:CDS
AATACTAGACTTGGTAGCCA+AGG 0.580125 6:-113470198 MsaT034511.1:CDS
AGAATCCTGAAGTTCCGTGT+TGG 0.580244 6:-113477146 MsaT034511.1:CDS
AAGCCGAAAGTGAAAAGGCT+AGG 0.580857 6:-113471824 MsaT034511.1:CDS
CCCAACCTTGTCCATTCTCG+AGG 0.581566 6:+113475421 None:intergenic
AAAAGATGGGGAGGTACCTA+GGG 0.581768 6:-113473888 MsaT034511.1:CDS
AGCGAATTGTGGTGATTCGA+GGG 0.582483 6:-113477316 MsaT034511.1:CDS
AGCAGCACAATATCGGGCCG+CGG 0.582491 6:+113471631 None:intergenic
AGCCAATGTGTTGATCAAGA+AGG 0.582557 6:+113472797 None:intergenic
GCATTGTACATCATCCAAAA+GGG 0.585488 6:-113472970 MsaT034511.1:CDS
TGTTTGACTATAATATCCCC+AGG 0.585658 6:+113474885 None:intergenic
GTGTAAGGCAAGAATTGTCA+AGG 0.585880 6:-113475470 MsaT034511.1:CDS
TGATGGTCATGGTGAATTTG+GGG 0.586554 6:-113477535 MsaT034511.1:CDS
TTGATAGTATGGAAGACAAA+GGG 0.592957 6:+113471669 None:intergenic
CCATTTGGGACCCACAACCT+AGG 0.594513 6:+113477090 None:intergenic
TCATTCACATCCGTTCCAAA+CGG 0.596373 6:+113477576 None:intergenic
CCTCTACAACTTGAGGGACA+GGG 0.598496 6:+113475544 None:intergenic
AAAGAGTTAACGTCGAACCT+GGG 0.598587 6:-113474902 MsaT034511.1:CDS
CAATCTGGAGAGGAGATCTA+CGG 0.603003 6:+113473158 None:intergenic
TCCCTTCTTGATCAACACAT+TGG 0.604902 6:-113472799 MsaT034511.1:CDS
GTGTAGCGCTGCAAAACCCT+AGG 0.605391 6:+113473872 None:intergenic
GCAACAGGCACACATAGAGC+AGG 0.607049 6:-113474994 MsaT034511.1:intron
AATCCTGAAGTTCCGTGTTG+GGG 0.611288 6:-113477144 MsaT034511.1:CDS
CCTGTCACCTCTACAACTTG+AGG 0.613083 6:+113475537 None:intergenic
GATGTCGGACTTGAGGCTGT+AGG 0.613986 6:+113472900 None:intergenic
TGGAGACTCCATAGAAGCAG+AGG 0.614231 6:+113470044 None:intergenic
CTCTACAACTTGAGGGACAG+GGG 0.615185 6:+113475545 None:intergenic
ATGGTTTAACGGTATCGACT+GGG 0.616359 6:-113470151 MsaT034511.1:CDS
ACGGTTTATGTAGCGAATTG+TGG 0.616525 6:-113477327 MsaT034511.1:CDS
GAAAGTGAAAAGGCTAGGAA+AGG 0.616878 6:-113471819 MsaT034511.1:CDS
ACCAGTCGGCAGGGAAACTG+TGG 0.616976 6:+113471024 None:intergenic
GAACATTCACAATTTGTGGG+AGG 0.617373 6:-113471085 MsaT034511.1:CDS
GTGGAAGAAAATACTAGACT+TGG 0.618510 6:-113470207 MsaT034511.1:CDS
GGATGGTTCGAGGATTGCGA+AGG 0.619040 6:-113477703 MsaT034511.1:CDS
TATGGAGTCTCCATTAGAAG+AGG 0.621007 6:-113470034 MsaT034511.1:CDS
GGTAACTTCAGAAAGGGAGT+CGG 0.621326 6:+113473110 None:intergenic
TGGAATAAGAAGGCTAGCCA+GGG 0.621966 6:-113477748 MsaT034511.1:CDS
GCATTCCATCCAAATGTGGA+AGG 0.622310 6:+113475504 None:intergenic
AACTTGCGGTACACAAGCTG+AGG 0.623764 6:+113471751 None:intergenic
TAGTATGGAAGACAAAGGGC+AGG 0.623893 6:+113471673 None:intergenic
ATCCTGAAGCTGGAATAAGA+AGG 0.626785 6:-113477758 MsaT034511.1:CDS
AATTCCCTCGAGAATGGACA+AGG 0.626939 6:-113475426 MsaT034511.1:CDS
TCCAATCTCAGAGCAGTCAG+TGG 0.631069 6:+113472215 None:intergenic
GTTGATAGTATGGAAGACAA+AGG 0.631395 6:+113471668 None:intergenic
TGATTCGAGGGCGGTTATAG+CGG 0.632965 6:-113477304 MsaT034511.1:CDS
TGTTGGGGTAGTGATGAAGA+AGG 0.634160 6:-113477129 MsaT034511.1:CDS
GTTTCTCTCAAGCCAAACTG+TGG 0.634394 6:-113476923 MsaT034511.1:CDS
ATACGAGAAATAATTTCTGG+AGG 0.635824 6:+113470099 None:intergenic
TTCAGCTCACAGAAAGACAT+GGG 0.639481 6:-113475388 MsaT034511.1:CDS
CCTAGCATTCCATCCAAATG+TGG 0.639930 6:+113475500 None:intergenic
TGGTCATGGTGAATTTGGGG+CGG 0.642685 6:-113477532 MsaT034511.1:CDS
ATTTCACCACCATCAGAGGA+TGG 0.644261 6:+113477816 None:intergenic
GCAAAGGTGCATAAAACTTG+CGG 0.644268 6:+113471737 None:intergenic
ATTTATTCAAGAGTATGCAT+AGG 0.644874 6:-113477909 MsaT034511.1:CDS
GCAGTATTCCAGCATATATG+CGG 0.653243 6:+113471711 None:intergenic
AACATCATCCTCCGCAACAG+CGG 0.653868 6:+113472768 None:intergenic
TATTCCAGCATATATGCGGT+CGG 0.654335 6:+113471715 None:intergenic
GCAATCCTCGAACCATCCGG+TGG 0.655475 6:+113477708 None:intergenic
TGCCTTAGAAGACTTGCACA+AGG 0.657250 6:-113471597 MsaT034511.1:intron
AGATGAGATCAACAGCGTCA+GGG 0.658816 6:+113470576 None:intergenic
CTGTCAATAGAGAAGCCGGA+GGG 0.662884 6:-113472841 MsaT034511.1:CDS
AAGAGTTAACGTCGAACCTG+GGG 0.664920 6:-113474901 MsaT034511.1:CDS
TTTGGGACCCACAACCTAGG+AGG 0.665893 6:+113477093 None:intergenic
CCAACCTTGTCCATTCTCGA+GGG 0.667982 6:+113475422 None:intergenic
TCTTCATCACTACCCCAACA+CGG 0.671915 6:+113477132 None:intergenic
TATTCGTATCTTTCTCAGCG+AGG 0.672818 6:-113477654 MsaT034511.1:CDS
TAGGTTGAGGGATAATTCCG+AGG 0.673540 6:-113472393 MsaT034511.1:CDS
GTAAAATGGACAATCTGGAG+AGG 0.675399 6:+113473148 None:intergenic
AGCTCACAGAAAGACATGGG+AGG 0.678397 6:-113475385 MsaT034511.1:CDS
TGTAAGGCAAGAATTGTCAA+GGG 0.679503 6:-113475469 MsaT034511.1:CDS
ATAGCTGCACAAGCATCACG+TGG 0.696584 6:+113475815 None:intergenic
GAATTGTGGTGATTCGAGGG+CGG 0.700172 6:-113477313 MsaT034511.1:CDS
ACTGTCAATAGAGAAGCCGG+AGG 0.713311 6:-113472842 MsaT034511.1:CDS
TTTCTGTGAGCTGAAGATGG+AGG 0.733419 6:+113475396 None:intergenic
GAGGACGATGATGTACAGAG+CGG 0.809595 6:-113472871 MsaT034511.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr6 gene 113469993 113477940 113469993 ID=MsaG034511
Chr6 mRNA 113469993 113477940 113469993 ID=MsaT034511.1;Parent=MsaG034511
Chr6 exon 113469993 113470238 113469993 ID=MsaT034511.1.exon15;Parent=MsaT034511.1
Chr6 CDS 113469993 113470238 113469993 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113470571 113470727 113470571 ID=MsaT034511.1.exon14;Parent=MsaT034511.1
Chr6 CDS 113470571 113470727 113470571 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113471026 113471147 113471026 ID=MsaT034511.1.exon13;Parent=MsaT034511.1
Chr6 CDS 113471026 113471147 113471026 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113471428 113471493 113471428 ID=MsaT034511.1.exon12;Parent=MsaT034511.1
Chr6 CDS 113471428 113471493 113471428 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113471598 113471875 113471598 ID=MsaT034511.1.exon11;Parent=MsaT034511.1
Chr6 CDS 113471598 113471875 113471598 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113472193 113472259 113472193 ID=MsaT034511.1.exon10;Parent=MsaT034511.1
Chr6 CDS 113472193 113472259 113472193 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113472337 113472412 113472337 ID=MsaT034511.1.exon9;Parent=MsaT034511.1
Chr6 CDS 113472337 113472412 113472337 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113472691 113473004 113472691 ID=MsaT034511.1.exon8;Parent=MsaT034511.1
Chr6 CDS 113472691 113473004 113472691 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113473080 113473269 113473080 ID=MsaT034511.1.exon7;Parent=MsaT034511.1
Chr6 CDS 113473080 113473269 113473080 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113473833 113473915 113473833 ID=MsaT034511.1.exon6;Parent=MsaT034511.1
Chr6 CDS 113473833 113473915 113473833 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113474652 113474714 113474652 ID=MsaT034511.1.exon5;Parent=MsaT034511.1
Chr6 CDS 113474652 113474714 113474652 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113474884 113475009 113474884 ID=MsaT034511.1.exon4;Parent=MsaT034511.1
Chr6 CDS 113474884 113475009 113474884 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113475380 113475610 113475380 ID=MsaT034511.1.exon3;Parent=MsaT034511.1
Chr6 CDS 113475380 113475610 113475380 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113475724 113475855 113475724 ID=MsaT034511.1.exon2;Parent=MsaT034511.1
Chr6 CDS 113475724 113475855 113475724 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Chr6 exon 113476915 113477940 113476915 ID=MsaT034511.1.exon1;Parent=MsaT034511.1
Chr6 CDS 113476915 113477940 113476915 ID=cds.MsaT034511.1;Parent=MsaT034511.1
Gene Sequence

>MsaT034511.1

ATGGGATGCATTTATTCAAGAGTATGCATAGGTGAAACATGTAAAGGTTCAAGCATCAATGGTGACCCAATTTCAAGACATGAGCTTCAACAAGCTTTTTCACCATCCTCTGATGGTGGTGAAATTCGAGACCAATTGAATCAGTTAAGCTTAACTAGAGATCCTGAAGCTGGAATAAGAAGGCTAGCCAGGGTTTCGTCGCAGTTTCTTCCACCGGATGGTTCGAGGATTGCGAAGGTTGATTCGGAGAAGTATGAATTACGGTATTCGTATCTTTCTCAGCGAGGTTATTATCCTGATGCTCTTGATAAAGCAAATCAAGATAGTTTTTGTATTCACACGCCGTTTGGAACGGATGTGAATGATCATTTTTTCGGTGTTTTTGATGGTCATGGTGAATTTGGGGCGGAGTGTTCGCAGTTTGTGAAGCGTAGGCTTTGTGAGAATTTATTGAGGAATTCTAAGTTTAATGTTGATCCTGTTGAGGCTTGTCATGCGGCTTTTTTAGCTACGAATTCGCAGTTACATGCTGATGTTTTAGATGATAGTATGAGTGGAACAACTGCTATAACGATTTTGGTTAGAGGGAAGACGGTTTATGTAGCGAATTGTGGTGATTCGAGGGCGGTTATAGCGGAGAAGAAAGGGAAAGATGGTGATATTGTTGCAGTTGATTTGTCTATTGATCAGACACCTTATAGGGTCGATGAGTTAGAAAGAGTGAAACTTTGTGGTGCTAGGGTTCTTACTTTGGATCAAATTGAAGGGTTAAAGAATCCTGAAGTTCCGTGTTGGGGTAGTGATGAAGAAGGCGATGATGGTGATCCTCCTAGGTTGTGGGTCCCAAATGGAATGTATCCTGGTACTGCTTTTACAAGGAGTATTGGTGATTCTATTGCCGAGACTATTGGTGTTGTTGCTAATCCGGAGATTGTTAGTTTTGAACTCACACCTAATAATCCATTTTTTGTTATTGCTAGTGATGGAGTTTTTGAGTTTCTCTCAAGCCAAACTGTGGTTGATATGGTTGCAAAATTTAAAGATCCACGTGATGCTTGTGCAGCTATAGTGGCAGAATCTTATCGACTATGGCTACAGTACGAGACTCGTACAGATGATATTACAGTCATCATTGTGCATATAAATGGACTAAATGAACCTGCTGTCGCTCACTCAGAAAGTTATCGTGAAATTTTACGAACCCCTGTCCCTCAAGTTGTAGAGGTGACAGGTTCAGAATCTCCTTCCACATTTGGATGGAATGCTAGGAATCATCGTGTAAGGCAAGAATTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTCGAGAATGGACAAGGTTGGGTTCCTCCATCTTCAGCTCACAGAAAGACATGGGAGGAAGAAGCACACATAGAGCAGGCGTTGAATGATCATTTTCTCTTTCGAAAACTTACCGAATCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTAACGTCGAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAAGTGACTGTTTTTATGTTGTTGGCAGCGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAGGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTATCATGCTTTGGAGAACTTGCTCTGATCGGAACTCTTTGGACTTTAAAGCGAGAAGATTTTCGCGGGATTTTAGTGTCAGAATTCTCTAACTTATCATCATTGAAGTTACTTCGGTCCGTAGATCTCCTCTCCAGATTGTCCATTTTACAACTGAGTCAGATCTCCGACTCCCTTTCTGAAGTTACCTTCTCAAGTGGACAGACAATAATCAATAAAAATGAAGTCCTTGCATTGTACATCATCCAAAAGGGACGTGTAAAATTAACTTTCGATGCTGATTTATTGACAAGTTCAAATACCTACAGCCTCAAGTCCGACATCGAAAATGAGGACGATGATGTACAGAGCGGAACAGAACTGTCAATAGAGAAGCCGGAGGGAAGCTATTTCGGTGAATGGTCCCTTCTTGATCAACACATTGGCTCCTTAACCGCTGTTGCGGAGGATGATGTTGAATGTGCTTTACTAACAAAGGACAAACTTGAATCAGTTATTGGCTCCTTGCAAAAGATTTCTCAGGAAGATCACAAGTTGAGGGATAATTCCGAGGAATTGAATAAAAGCTTTGAATTCTCATCGTTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACGTTATATTCCACTGACTGCTCTGAGATTGGACTTGCAAATTTAAAAGACTCAGAAAATGTGCTTACTTTGAAGAAATTTTCCAAGCCGAAAGTGAAAAGGCTAGGAAAGGAATCACAAGTCTTGAAAGAGAAAGATTTGATTAAGGGTATGAGCTCCTCAGCTTGTGTACCGCAAGTTTTATGCACCTTTGCCGACCGCATATATGCTGGAATACTGCTAAATACACGTCTTGCCTGCCCTTTGTCTTCCATACTATCAACTCCTTTTAGCGAATCCGCGGCCCGATATTGTGCTGCTTCTGTTGTGATTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTGTATAGAGGTGTCTCGCATGATGTTTTGATGTTGGATCAAAGAGGACATATACAGCTGGTGGACTTCAGATTTGGAAAGAAGCTCTCTGATGAGAGAACATTCACAATTTGTGGGAGGGCAGATTCACTAGCTCCAGAGATTGTTCTCGGAAAAGGCCACAGTTTCCCTGCCGACTGGTGGGCATTGGGAGTTTTAGTATATTTTATGTTATGCGGCGAAATGCCATTTGGATCATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAAAGGAAACTAAATCTTCCTGAAACTTTTAGCCCTGACGCTGTTGATCTCATCTCCAAGTTACTTGATGTGGAAGAAAATACTAGACTTGGTAGCCAAGGTTCTGATTCTGTCAAAAGTCACTCATGGTTTAACGGTATCGACTGGGAAGCACTTAGACACAACGCTTTTCCCGTTCCTCCAGAAATTATTTCTCGTATAACACAATACTTGGAAGTTCGTTATGAGGATTCCTCTGCTTCTATGGAGTCTCCATTAGAAGAGGTGGAAGAACTTAATGTGCCTGAATGGCTTGAAGATTGGTAG
Protein sequence

>MsaT034511.1

MGCIYSRVCIGETCKGSSINGDPISRHELQQAFSPSSDGGEIRDQLNQLSLTRDPEAGIRRLARVSSQFLPPDGSRIAKVDSEKYELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTDVNDHFFGVFDGHGEFGAECSQFVKRRLCENLLRNSKFNVDPVEACHAAFLATNSQLHADVLDDSMSGTTAITILVRGKTVYVANCGDSRAVIAEKKGKDGDIVAVDLSIDQTPYRVDELERVKLCGARVLTLDQIEGLKNPEVPCWGSDEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVSFELTPNNPFFVIASDGVFEFLSSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLNEPAVAHSESYREILRTPVPQVVEVTGSESPSTFGWNARNHRVRQELSRARLRAIENSLENGQGWVPPSSAHRKTWEEEAHIEQALNDHFLFRKLTESQCHVLLDCMQRVNVEPGDIIVKQGGESDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALIGTLWTLKREDFRGILVSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVTFSSGQTIINKNEVLALYIIQKGRVKLTFDADLLTSSNTYSLKSDIENEDDDVQSGTELSIEKPEGSYFGEWSLLDQHIGSLTAVAEDDVECALLTKDKLESVIGSLQKISQEDHKLRDNSEELNKSFEFSSFDKVQLSDLEWRKTLYSTDCSEIGLANLKDSENVLTLKKFSKPKVKRLGKESQVLKEKDLIKGMSSSACVPQVLCTFADRIYAGILLNTRLACPLSSILSTPFSESAARYCAASVVIALEDLHKNGVLYRGVSHDVLMLDQRGHIQLVDFRFGKKLSDERTFTICGRADSLAPEIVLGKGHSFPADWWALGVLVYFMLCGEMPFGSWRENELDTVAKIAKRKLNLPETFSPDAVDLISKLLDVEENTRLGSQGSDSVKSHSWFNGIDWEALRHNAFPVPPEIISRITQYLEVRYEDSSASMESPLEEVEELNVPEWLEDW*