AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG035512

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG035512 MtrunA17_Chr7g0218081 96.273 483 15 2 1 483 42 521 0.0 951
MsaG035512 MtrunA17_Chr5g0418191 48.560 486 147 12 1 481 45 432 2.88e-130 384
MsaG035512 MtrunA17_Chr4g0042831 47.179 390 129 12 103 481 65 388 9.90e-96 294
MsaG035512 MtrunA17_Chr7g0249311 50.662 302 114 7 185 453 176 475 8.05e-87 280
MsaG035512 MtrunA17_Chr5g0445311 39.294 453 211 9 55 465 29 459 6.99e-85 271
MsaG035512 MtrunA17_Chr3g0101131 51.786 280 109 5 168 439 223 484 7.58e-85 273
MsaG035512 MtrunA17_Chr3g0079691 50.329 304 111 8 186 452 278 578 2.10e-83 271
MsaG035512 MtrunA17_Chr3g0106491 41.562 397 183 9 68 438 60 433 8.10e-81 259
MsaG035512 MtrunA17_Chr7g0263531 49.104 279 121 4 173 446 174 436 8.53e-80 255
MsaG035512 MtrunA17_Chr7g0243891 51.111 270 88 5 185 444 213 448 5.07e-77 251
MsaG035512 MtrunA17_Chr5g0432161 53.307 257 105 5 183 434 239 485 3.10e-75 247
MsaG035512 MtrunA17_Chr4g0004911 40.568 387 164 13 73 432 51 398 7.70e-72 236
MsaG035512 MtrunA17_Chr7g0249301 44.850 301 108 6 185 432 59 354 1.28e-70 229
MsaG035512 MtrunA17_Chr7g0249301 38.843 121 60 3 332 446 18 130 7.69e-15 76.3
MsaG035512 MtrunA17_Chr4g0074001 41.176 255 125 5 186 432 184 421 6.22e-49 175
MsaG035512 MtrunA17_Chr1g0188941 60.714 84 33 0 346 429 27 110 4.60e-32 119
MsaG035512 MtrunA17_Chr1g0188941 56.452 62 22 2 188 246 51 110 5.17e-16 73.9
MsaG035512 MtrunA17_Chr7g0270191 60.215 93 37 0 349 441 124 216 6.81e-31 121
MsaG035512 MtrunA17_Chr7g0270191 45.745 94 35 2 158 250 130 208 1.19e-17 83.6
MsaG035512 MtrunA17_Chr8g0335811 60.465 86 34 0 350 435 134 219 2.39e-30 117
MsaG035512 MtrunA17_Chr8g0335811 63.158 57 20 1 188 243 154 210 1.40e-17 81.6
MsaG035512 MtrunA17_Chr1g0194481 61.728 81 31 0 355 435 143 223 1.27e-29 118
MsaG035512 MtrunA17_Chr1g0194481 44.681 94 36 2 158 250 143 221 2.05e-16 80.1
MsaG035512 MtrunA17_Chr3g0129361 63.514 74 27 0 353 426 127 200 8.12e-29 113
MsaG035512 MtrunA17_Chr3g0129361 59.649 57 22 1 188 243 144 200 7.97e-16 76.6
MsaG035512 MtrunA17_Chr4g0051881 63.158 76 28 0 356 431 164 239 1.80e-28 115
MsaG035512 MtrunA17_Chr4g0051881 59.375 64 25 1 188 250 178 241 3.62e-16 79.7
MsaG035512 MtrunA17_Chr2g0294231 63.636 77 28 0 355 431 188 264 4.91e-28 115
MsaG035512 MtrunA17_Chr2g0294231 45.745 94 35 2 158 250 188 266 4.80e-17 82.8
MsaG035512 MtrunA17_Chr5g0418781 49.107 112 53 2 350 457 104 215 6.95e-28 112
MsaG035512 MtrunA17_Chr5g0418781 40.650 123 48 5 122 243 82 180 2.97e-15 76.3
MsaG035512 MtrunA17_Chr5g0443131 61.842 76 29 0 356 431 143 218 1.02e-27 112
MsaG035512 MtrunA17_Chr5g0443131 59.375 64 25 1 188 250 157 220 2.29e-16 79.7
MsaG035512 MtrunA17_Chr7g0224801 68.182 66 21 0 361 426 84 149 1.60e-27 108
MsaG035512 MtrunA17_Chr7g0224801 56.140 57 24 1 188 243 93 149 1.80e-15 74.3
MsaG035512 MtrunA17_Chr8g0383351 50.435 115 52 3 316 426 103 216 2.13e-27 109
MsaG035512 MtrunA17_Chr8g0383351 59.649 57 22 1 188 243 160 216 4.60e-16 77.4
MsaG035512 MtrunA17_Chr5g0447701 57.647 85 36 0 355 439 237 321 3.04e-27 112
MsaG035512 MtrunA17_Chr5g0447701 42.202 109 55 4 334 440 59 161 6.23e-13 70.5
MsaG035512 MtrunA17_Chr8g0383251 56.962 79 34 0 357 435 95 173 3.31e-27 107
MsaG035512 MtrunA17_Chr8g0383251 54.839 62 27 1 188 248 108 169 4.86e-14 70.5
MsaG035512 MtrunA17_Chr8g0386241 53.571 84 39 0 351 434 84 167 1.46e-26 105
MsaG035512 MtrunA17_Chr8g0386241 52.632 57 26 1 188 243 103 159 6.21e-15 73.2
MsaG035512 MtrunA17_Chr7g0248721 59.740 77 30 1 350 426 121 196 1.04e-24 102
MsaG035512 MtrunA17_Chr7g0248721 58.065 62 24 2 183 243 136 196 4.72e-16 77.0
MsaG035512 MtrunA17_Chr1g0150801 54.545 77 34 1 350 426 83 158 3.53e-24 98.6
MsaG035512 MtrunA17_Chr1g0150801 54.386 57 25 1 188 243 102 158 2.13e-13 68.2
MsaG035512 MtrunA17_Chr7g0270831 52.222 90 41 2 357 444 203 292 3.94e-24 104
MsaG035512 MtrunA17_Chr7g0270831 47.887 71 35 2 189 257 217 287 6.22e-13 70.5
MsaG035512 MtrunA17_Chr3g0129321 52.000 75 36 0 356 430 104 178 5.43e-24 99.4
MsaG035512 MtrunA17_Chr3g0129321 57.377 61 25 1 188 247 118 178 3.94e-15 74.3
MsaG035512 MtrunA17_Chr2g0288871 31.405 242 142 7 199 429 137 365 1.45e-23 103
MsaG035512 MtrunA17_Chr4g0068541 47.000 100 51 1 357 456 195 292 2.17e-23 102
MsaG035512 MtrunA17_Chr4g0068541 57.812 64 26 1 188 250 208 271 2.32e-16 81.3
MsaG035512 MtrunA17_Chr1g0189391 52.273 88 40 2 357 443 84 170 2.80e-23 100
MsaG035512 MtrunA17_Chr1g0189391 53.448 58 25 2 188 243 97 154 1.23e-11 65.9
MsaG035512 MtrunA17_Chr3g0099641 45.918 98 51 2 349 444 230 327 2.98e-23 102
MsaG035512 MtrunA17_Chr3g0099641 53.333 60 26 2 189 246 252 311 3.04e-13 71.6
MsaG035512 MtrunA17_Chr2g0322391 48.454 97 49 1 346 441 325 421 4.19e-23 102
MsaG035512 MtrunA17_Chr2g0322391 52.459 61 27 2 188 246 349 409 1.86e-12 69.7
MsaG035512 MtrunA17_Chr4g0025061 46.392 97 51 1 346 441 336 432 4.29e-23 102
MsaG035512 MtrunA17_Chr4g0025061 29.530 149 96 3 111 257 290 431 3.32e-11 65.5
MsaG035512 MtrunA17_Chr4g0075201 51.190 84 40 1 349 431 246 329 9.94e-23 100
MsaG035512 MtrunA17_Chr4g0075201 52.459 61 27 2 188 246 267 327 1.14e-12 70.1
MsaG035512 MtrunA17_Chr6g0485431 50.602 83 40 1 348 429 132 214 1.78e-22 98.6
MsaG035512 MtrunA17_Chr6g0485431 44.776 67 35 2 187 251 153 219 1.22e-12 69.3
MsaG035512 MtrunA17_Chr4g0060271 45.918 98 48 2 333 429 222 315 1.40e-21 98.2
MsaG035512 MtrunA17_Chr4g0060271 50.000 68 31 3 183 247 249 316 2.72e-12 68.9
MsaG035512 MtrunA17_Chr4g0051181 51.163 86 37 2 347 431 224 305 1.44e-21 97.4
MsaG035512 MtrunA17_Chr4g0051181 49.206 63 30 2 188 248 243 305 2.04e-11 65.9
MsaG035512 MtrunA17_Chr5g0432071 54.023 87 38 1 171 257 87 171 2.17e-21 92.4
MsaG035512 MtrunA17_Chr5g0432071 43.434 99 45 4 370 465 104 194 5.39e-15 73.9
MsaG035512 MtrunA17_Chr4g0025051 45.361 97 52 1 346 441 311 407 2.23e-21 97.4
MsaG035512 MtrunA17_Chr1g0147881 53.012 83 35 2 350 431 245 324 8.25e-21 93.6
MsaG035512 MtrunA17_Chr1g0147881 47.059 85 39 4 179 261 254 334 1.12e-13 72.0
MsaG035512 MtrunA17_Chr4g0053281 51.807 83 36 2 350 431 249 328 1.78e-20 92.4
MsaG035512 MtrunA17_Chr4g0053281 54.839 62 25 3 184 243 263 323 3.85e-14 73.6
MsaG035512 MtrunA17_Chr5g0401821 61.905 63 23 1 367 428 196 258 3.15e-20 90.5
MsaG035512 MtrunA17_Chr5g0401821 53.226 62 26 3 184 243 196 256 2.78e-13 70.1
MsaG035512 MtrunA17_Chr2g0302391 47.674 86 44 1 357 441 198 283 4.55e-20 92.4
MsaG035512 MtrunA17_Chr2g0302391 34.646 127 68 4 189 300 212 338 6.96e-12 67.4
MsaG035512 MtrunA17_Chr7g0238921 61.017 59 23 0 368 426 122 180 2.04e-19 89.0
MsaG035512 MtrunA17_Chr7g0238921 39.344 122 58 6 129 243 68 180 2.26e-14 73.9
MsaG035512 MtrunA17_Chr7g0216891 45.882 85 41 2 343 426 196 276 2.31e-19 91.3
MsaG035512 MtrunA17_Chr7g0216891 52.381 63 27 3 184 243 214 276 3.13e-11 65.9
MsaG035512 MtrunA17_Chr2g0333851 44.828 87 47 1 368 453 167 253 2.43e-19 89.0
MsaG035512 MtrunA17_Chr2g0333851 48.333 60 29 2 189 246 170 229 3.06e-11 64.7
MsaG035512 MtrunA17_Chr8g0348311 41.818 110 60 3 346 454 132 238 3.53e-19 88.6
MsaG035512 MtrunA17_Chr5g0447711 40.000 90 54 0 355 444 215 304 4.07e-19 88.2
MsaG035512 MtrunA17_Chr5g0447711 48.276 58 30 0 189 246 84 141 3.19e-12 67.4
MsaG035512 MtrunA17_Chr5g0447711 42.667 75 40 2 187 260 229 301 5.32e-11 63.9
MsaG035512 MtrunA17_Chr4g0024391 40.000 100 59 1 343 441 202 301 5.23e-19 89.7
MsaG035512 MtrunA17_Chr2g0293481 47.778 90 36 2 371 449 268 357 7.36e-19 89.4
MsaG035512 MtrunA17_Chr3g0136961 54.795 73 30 3 357 426 123 195 8.23e-19 86.7
MsaG035512 MtrunA17_Chr3g0136961 40.000 95 46 4 189 276 139 229 2.15e-12 67.8
MsaG035512 MtrunA17_Chr7g0270051 52.857 70 32 1 371 439 54 123 1.47e-18 85.5
MsaG035512 MtrunA17_Chr7g0270051 51.613 62 28 2 189 248 54 115 2.02e-12 67.4
MsaG035512 MtrunA17_Chr8g0387501 48.052 77 39 1 369 444 128 204 2.82e-18 84.7
MsaG035512 MtrunA17_Chr8g0387501 45.455 66 34 2 183 246 124 189 8.04e-11 62.8
MsaG035512 MtrunA17_Chr1g0184691 60.656 61 23 1 367 426 290 350 3.17e-18 86.3
MsaG035512 MtrunA17_Chr1g0184691 53.125 64 27 3 184 245 290 352 3.27e-13 70.9
MsaG035512 MtrunA17_Chr4g0071521 50.000 78 35 2 350 426 228 302 3.23e-18 85.5
MsaG035512 MtrunA17_Chr4g0071521 46.575 73 36 3 179 249 237 308 5.01e-13 70.1
MsaG035512 MtrunA17_Chr2g0284321 52.703 74 31 2 371 440 36 109 4.28e-18 83.2
MsaG035512 MtrunA17_Chr2g0284321 37.288 118 56 5 184 283 31 148 1.79e-13 69.7
MsaG035512 MtrunA17_Chr7g0248691 47.191 89 45 2 347 434 132 219 8.03e-18 84.3
MsaG035512 MtrunA17_Chr8g0379461 50.000 66 32 1 371 435 77 142 1.82e-17 82.0
MsaG035512 MtrunA17_Chr8g0379461 47.692 65 32 2 186 248 74 138 1.21e-12 67.8
MsaG035512 MtrunA17_Chr1g0202461 43.956 91 50 1 345 434 236 326 2.35e-17 84.0
MsaG035512 MtrunA17_Chr1g0202461 44.615 65 34 2 184 246 257 321 7.98e-12 67.0
MsaG035512 MtrunA17_Chr1g0150281 47.945 73 35 2 357 426 125 197 3.59e-17 82.0
MsaG035512 MtrunA17_Chr1g0150281 49.123 57 27 2 189 243 141 197 2.76e-11 64.3
MsaG035512 MtrunA17_Chr7g0228941 54.098 61 27 1 367 426 49 109 7.94e-17 76.6
MsaG035512 MtrunA17_Chr7g0228941 48.529 68 32 3 179 244 44 110 9.67e-14 68.2
MsaG035512 MtrunA17_Chr6g0468181 56.923 65 28 0 204 268 18 82 1.84e-16 75.5
MsaG035512 MtrunA17_Chr2g0319961 42.105 95 49 3 350 440 57 149 2.10e-16 79.3
MsaG035512 MtrunA17_Chr2g0319961 48.438 64 31 2 186 247 78 141 1.71e-11 64.7
MsaG035512 MtrunA17_Chr4g0001361 49.315 73 32 2 362 429 150 222 3.07e-16 79.7
MsaG035512 MtrunA17_Chr4g0001361 50.000 60 28 2 189 246 163 222 2.60e-12 67.8
MsaG035512 MtrunA17_Chr1g0188961 61.111 54 21 0 390 443 3 56 3.14e-16 73.2
MsaG035512 MtrunA17_Chr2g0289181 50.000 74 36 1 359 431 3 76 3.18e-16 78.2
MsaG035512 MtrunA17_Chr2g0289181 50.704 71 33 2 184 252 10 80 2.65e-15 75.5
MsaG035512 MtrunA17_Chr1g0150271 39.216 102 56 3 331 429 63 161 5.15e-16 77.8
MsaG035512 MtrunA17_Chr3g0126391 36.290 124 60 4 369 481 132 247 1.70e-15 77.8
MsaG035512 MtrunA17_Chr3g0126391 49.231 65 29 2 181 241 126 190 1.32e-14 75.1
MsaG035512 MtrunA17_Chr1g0188971 45.570 79 42 1 313 390 4 82 2.11e-15 71.2
MsaG035512 MtrunA17_Chr3g0139021 53.226 62 28 1 367 427 311 372 2.75e-15 77.8
MsaG035512 MtrunA17_Chr3g0139021 48.438 64 30 3 184 245 311 373 3.64e-12 68.2
MsaG035512 MtrunA17_Chr8g0387981 44.048 84 39 2 349 424 106 189 1.13e-13 72.4
MsaG035512 MtrunA17_Chr8g0387981 49.206 63 28 2 183 241 127 189 2.51e-13 71.2
MsaG035512 MtrunA17_Chr5g0419241 50.000 50 25 0 349 398 56 105 1.50e-13 67.0
MsaG035512 MtrunA17_Chr8g0347251 47.458 59 27 2 187 241 135 193 4.61e-12 67.4
MsaG035512 MtrunA17_Chr7g0275531 48.276 58 26 2 188 241 118 175 1.10e-11 65.9
MsaG035512 MtrunA17_Chr7g0275531 47.458 59 28 1 369 424 117 175 2.28e-11 65.1
MsaG035512 MtrunA17_Chr4g0009881 46.269 67 35 1 180 246 9 74 1.27e-11 61.6
MsaG035512 MtrunA17_Chr2g0315361 46.667 60 29 1 368 424 146 205 5.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG035512 AT2G03340.1 55.405 444 140 16 55 481 110 512 1.13e-136 404
MsaG035512 AT1G13960.1 50.296 507 190 16 1 482 45 514 1.04e-132 394
MsaG035512 AT1G13960.2 52.261 398 141 12 97 482 1 361 1.10e-107 324
MsaG035512 AT3G01080.2 40.800 500 189 14 1 483 52 461 4.51e-91 285
MsaG035512 AT3G01080.1 52.961 304 96 8 184 483 163 423 1.45e-85 270
MsaG035512 AT4G26640.5 54.762 252 96 3 187 435 34 270 5.15e-81 256
MsaG035512 AT4G26640.5 55.072 69 28 2 368 434 33 100 1.05e-13 73.2
MsaG035512 AT4G26640.6 54.762 252 96 3 187 435 34 270 5.15e-81 256
MsaG035512 AT4G26640.6 55.072 69 28 2 368 434 33 100 1.05e-13 73.2
MsaG035512 AT4G26640.4 54.762 252 96 3 187 435 34 270 5.15e-81 256
MsaG035512 AT4G26640.4 55.072 69 28 2 368 434 33 100 1.05e-13 73.2
MsaG035512 AT4G26640.3 54.762 252 96 3 187 435 34 270 5.15e-81 256
MsaG035512 AT4G26640.3 55.072 69 28 2 368 434 33 100 1.05e-13 73.2
MsaG035512 AT4G26640.1 54.331 254 98 3 187 437 138 376 1.87e-80 258
MsaG035512 AT4G26640.1 55.072 69 28 2 368 434 137 204 9.92e-14 73.6
MsaG035512 AT4G26440.1 49.291 282 117 4 180 442 170 444 2.38e-80 260
MsaG035512 AT4G26640.7 54.331 254 98 3 187 437 170 408 2.61e-80 259
MsaG035512 AT4G26640.7 55.072 69 28 2 368 434 169 236 9.15e-14 73.9
MsaG035512 AT4G26640.2 54.331 254 98 3 187 437 210 448 5.03e-80 259
MsaG035512 AT4G26640.2 55.072 69 28 2 368 434 209 276 9.98e-14 73.9
MsaG035512 AT2G38470.1 51.418 282 109 6 185 452 181 448 2.84e-78 254
MsaG035512 AT5G07100.1 40.164 366 117 10 71 432 29 296 1.72e-68 221
MsaG035512 AT5G07100.1 40.000 95 46 1 356 439 92 186 5.60e-15 76.3
MsaG035512 AT5G07100.1 41.818 110 44 3 144 250 205 297 9.77e-15 75.5
MsaG035512 AT5G07100.2 47.200 250 65 5 184 432 20 203 3.71e-64 207
MsaG035512 AT5G07100.2 41.818 110 44 3 144 250 112 204 8.64e-15 73.9
MsaG035512 AT5G07100.2 48.571 70 36 0 370 439 24 93 1.33e-14 73.2
MsaG035512 AT5G07100.4 47.200 250 65 5 184 432 20 203 3.71e-64 207
MsaG035512 AT5G07100.4 41.818 110 44 3 144 250 112 204 8.64e-15 73.9
MsaG035512 AT5G07100.4 48.571 70 36 0 370 439 24 93 1.33e-14 73.2
MsaG035512 AT5G07100.5 47.200 250 65 5 184 432 20 203 3.71e-64 207
MsaG035512 AT5G07100.5 41.818 110 44 3 144 250 112 204 8.64e-15 73.9
MsaG035512 AT5G07100.5 48.571 70 36 0 370 439 24 93 1.33e-14 73.2
MsaG035512 AT5G07100.3 47.200 250 65 5 184 432 20 203 3.71e-64 207
MsaG035512 AT5G07100.3 41.818 110 44 3 144 250 112 204 8.64e-15 73.9
MsaG035512 AT5G07100.3 48.571 70 36 0 370 439 24 93 1.33e-14 73.2
MsaG035512 AT2G37260.3 46.183 262 109 6 184 428 81 327 3.80e-61 204
MsaG035512 AT2G37260.3 45.161 93 46 2 339 431 58 145 7.36e-14 73.2
MsaG035512 AT2G37260.2 46.183 262 109 6 184 428 79 325 4.39e-61 204
MsaG035512 AT2G37260.2 45.161 93 46 2 339 431 56 143 7.45e-14 73.2
MsaG035512 AT2G37260.1 46.183 262 109 6 184 428 161 407 1.44e-60 204
MsaG035512 AT2G37260.1 48.750 80 36 2 352 431 151 225 1.57e-13 72.8
MsaG035512 AT2G30250.1 46.850 254 105 5 183 431 161 389 1.51e-60 203
MsaG035512 AT2G04880.2 40.453 309 162 9 134 437 59 350 1.04e-59 203
MsaG035512 AT4G12020.6 43.421 304 134 13 92 390 391 661 8.96e-51 186
MsaG035512 AT4G12020.6 45.333 75 40 1 369 443 467 540 9.00e-12 68.6
MsaG035512 AT4G12020.8 43.421 304 134 13 92 390 391 661 8.96e-51 186
MsaG035512 AT4G12020.8 45.333 75 40 1 369 443 467 540 9.00e-12 68.6
MsaG035512 AT4G12020.1 43.421 304 134 13 92 390 391 661 9.44e-51 186
MsaG035512 AT4G12020.1 45.333 75 40 1 369 443 467 540 8.72e-12 68.6
MsaG035512 AT4G12020.9 43.421 304 134 13 92 390 391 661 9.44e-51 186
MsaG035512 AT4G12020.9 45.333 75 40 1 369 443 467 540 8.72e-12 68.6
MsaG035512 AT4G12020.3 43.421 304 134 13 92 390 391 661 9.56e-51 186
MsaG035512 AT4G12020.3 45.333 75 40 1 369 443 467 540 8.20e-12 68.6
MsaG035512 AT4G12020.10 43.421 304 134 13 92 390 391 661 1.09e-50 186
MsaG035512 AT4G12020.10 45.333 75 40 1 369 443 467 540 8.48e-12 68.6
MsaG035512 AT4G12020.11 43.421 304 134 13 92 390 391 661 1.16e-50 186
MsaG035512 AT4G12020.11 45.333 75 40 1 369 443 467 540 1.31e-11 67.8
MsaG035512 AT4G12020.7 43.421 304 134 13 92 390 391 661 1.17e-50 186
MsaG035512 AT4G12020.7 45.333 75 40 1 369 443 467 540 8.72e-12 68.6
MsaG035512 AT4G12020.2 43.421 304 134 13 92 390 391 661 1.27e-50 186
MsaG035512 AT4G12020.2 45.333 75 40 1 369 443 467 540 9.11e-12 68.6
MsaG035512 AT4G12020.4 42.763 304 136 12 92 390 391 661 1.37e-50 186
MsaG035512 AT4G12020.4 45.333 75 40 1 369 443 467 540 8.94e-12 68.6
MsaG035512 AT4G12020.5 43.421 304 134 13 92 390 324 594 1.52e-50 186
MsaG035512 AT4G12020.5 45.333 75 40 1 369 443 400 473 9.21e-12 68.6
MsaG035512 AT4G30935.1 42.400 250 115 7 186 430 166 391 3.74e-49 175
MsaG035512 AT5G56270.1 72.449 98 27 0 335 432 452 549 1.23e-42 161
MsaG035512 AT3G01080.3 35.789 285 120 8 1 270 52 288 1.42e-38 143
MsaG035512 AT3G01080.3 55.556 63 27 1 370 432 205 266 2.66e-15 77.4
MsaG035512 AT2G04880.1 53.774 106 48 1 332 437 270 374 9.31e-33 130
MsaG035512 AT2G04880.1 45.299 117 58 3 134 248 59 171 1.03e-21 98.2
MsaG035512 AT2G04880.1 50.000 90 37 3 187 269 306 394 1.41e-17 85.5
MsaG035512 AT2G04880.1 51.562 64 30 1 368 431 109 171 1.02e-13 73.6
MsaG035512 AT4G18170.1 50.435 115 53 1 316 430 122 232 4.38e-30 119
MsaG035512 AT4G18170.1 57.812 64 26 1 188 250 172 235 2.00e-15 77.8
MsaG035512 AT2G44745.1 56.383 94 38 2 350 441 125 217 5.96e-30 116
MsaG035512 AT2G44745.1 63.158 57 20 1 188 243 145 201 1.61e-17 82.0
MsaG035512 AT1G29860.1 62.338 77 29 0 355 431 121 197 3.36e-29 116
MsaG035512 AT1G29860.1 47.778 90 31 2 158 246 121 195 3.72e-16 79.3
MsaG035512 AT4G39410.1 62.821 78 29 0 349 426 202 279 4.89e-29 116
MsaG035512 AT4G39410.1 57.895 57 23 1 188 243 223 279 3.26e-14 73.9
MsaG035512 AT5G46350.1 45.378 119 53 2 356 468 169 281 8.17e-29 116
MsaG035512 AT5G46350.1 57.576 66 26 2 188 252 183 247 2.15e-15 77.8
MsaG035512 AT1G64000.1 61.039 77 30 0 350 426 94 170 8.68e-29 112
MsaG035512 AT1G64000.1 55.738 61 26 1 184 243 110 170 3.35e-16 77.4
MsaG035512 AT5G13080.1 67.164 67 22 0 360 426 57 123 1.83e-28 110
MsaG035512 AT5G13080.1 54.386 57 25 1 188 243 67 123 9.79e-15 72.0
MsaG035512 AT1G69310.4 48.718 117 55 1 310 426 92 203 1.87e-28 114
MsaG035512 AT1G69310.4 58.621 58 23 1 188 244 147 204 1.36e-15 77.8
MsaG035512 AT1G69310.2 48.718 117 55 1 310 426 92 203 1.87e-28 114
MsaG035512 AT1G69310.2 58.621 58 23 1 188 244 147 204 1.36e-15 77.8
MsaG035512 AT1G69310.1 48.718 117 55 1 310 426 92 203 1.87e-28 114
MsaG035512 AT1G69310.1 58.621 58 23 1 188 244 147 204 1.36e-15 77.8
MsaG035512 AT5G41570.1 66.197 71 24 0 356 426 84 154 1.95e-28 111
MsaG035512 AT5G41570.1 55.738 61 26 1 184 243 94 154 1.08e-15 75.5
MsaG035512 AT2G47260.1 61.250 80 31 0 350 429 154 233 3.18e-28 115
MsaG035512 AT2G47260.1 45.745 94 35 2 158 250 159 237 3.67e-17 83.2
MsaG035512 AT5G26170.1 62.857 70 26 0 357 426 100 169 1.73e-27 108
MsaG035512 AT5G26170.1 56.140 57 24 1 188 243 113 169 7.72e-15 72.8
MsaG035512 AT5G49520.1 52.632 95 45 0 337 431 188 282 2.02e-27 114
MsaG035512 AT5G49520.1 59.375 64 25 1 188 250 221 284 2.14e-17 84.3
MsaG035512 AT3G01970.1 55.952 84 37 0 357 440 52 135 3.34e-27 107
MsaG035512 AT3G01970.1 53.846 65 27 2 188 249 65 129 9.58e-14 68.9
MsaG035512 AT3G62340.1 48.696 115 56 1 356 470 104 215 1.18e-26 109
MsaG035512 AT3G62340.1 53.750 80 31 3 188 264 118 194 1.07e-15 77.8
MsaG035512 AT1G55600.1 57.831 83 35 0 349 431 286 368 1.55e-25 109
MsaG035512 AT1G55600.1 56.452 62 26 1 188 248 307 368 7.67e-15 77.0
MsaG035512 AT4G04450.2 50.000 104 50 2 343 444 171 274 2.02e-25 108
MsaG035512 AT4G04450.2 53.333 60 26 2 189 246 199 258 5.88e-13 71.2
MsaG035512 AT2G46130.1 56.579 76 33 0 351 426 11 86 3.19e-25 100
MsaG035512 AT2G46130.1 61.404 57 21 1 188 243 30 86 4.19e-17 77.4
MsaG035512 AT5G64810.1 48.387 93 46 1 335 427 77 167 4.08e-25 102
MsaG035512 AT5G64810.1 53.448 58 26 1 188 244 110 167 1.47e-12 67.0
MsaG035512 AT4G04450.1 50.000 104 50 2 343 444 265 368 8.77e-25 107
MsaG035512 AT4G04450.1 53.333 60 26 2 189 246 293 352 1.11e-12 70.5
MsaG035512 AT1G62300.1 42.029 138 73 4 298 429 236 372 1.29e-23 104
MsaG035512 AT1G62300.1 53.333 60 26 2 189 246 313 372 1.88e-12 70.1
MsaG035512 AT1G69310.3 46.154 117 54 2 310 426 92 199 1.35e-23 100
MsaG035512 AT1G69310.3 53.448 58 22 2 188 244 147 200 4.29e-11 64.3
MsaG035512 AT1G68150.1 44.340 106 58 1 338 442 203 308 7.42e-23 100
MsaG035512 AT1G68150.1 49.206 63 30 2 188 248 235 297 2.11e-11 65.9
MsaG035512 AT4G22070.4 52.439 82 38 1 349 429 276 357 7.71e-23 102
MsaG035512 AT4G22070.4 53.333 60 26 2 189 246 298 357 2.27e-12 69.7
MsaG035512 AT4G22070.3 52.439 82 38 1 349 429 276 357 7.71e-23 102
MsaG035512 AT4G22070.3 53.333 60 26 2 189 246 298 357 2.27e-12 69.7
MsaG035512 AT4G22070.2 52.439 82 38 1 349 429 276 357 7.71e-23 102
MsaG035512 AT4G22070.2 53.333 60 26 2 189 246 298 357 2.27e-12 69.7
MsaG035512 AT4G22070.1 52.439 82 38 1 349 429 276 357 7.71e-23 102
MsaG035512 AT4G22070.1 53.333 60 26 2 189 246 298 357 2.27e-12 69.7
MsaG035512 AT5G15130.1 46.237 93 49 1 350 441 207 299 5.14e-22 99.8
MsaG035512 AT5G15130.1 49.275 69 32 3 183 248 221 289 5.61e-12 68.6
MsaG035512 AT2G21900.1 41.346 104 57 2 345 444 80 183 5.16e-22 94.4
MsaG035512 AT2G21900.1 53.226 62 24 2 188 246 109 168 2.14e-13 69.3
MsaG035512 AT5G15130.2 46.237 93 49 1 350 441 165 257 5.26e-22 99.4
MsaG035512 AT5G15130.2 49.275 69 32 3 183 248 179 247 4.93e-12 68.6
MsaG035512 AT2G23320.1 34.783 161 92 2 269 428 151 299 1.26e-21 95.9
MsaG035512 AT2G23320.1 56.452 62 24 3 184 243 237 297 5.53e-14 73.2
MsaG035512 AT1G18860.1 51.852 81 38 1 350 429 219 299 2.70e-21 97.4
MsaG035512 AT4G01720.1 50.000 84 41 1 347 429 216 299 2.51e-20 94.0
MsaG035512 AT4G01720.1 51.613 62 28 2 187 246 238 299 1.80e-12 69.7
MsaG035512 AT4G23550.1 35.938 128 81 1 322 448 92 219 3.30e-20 91.7
MsaG035512 AT4G23550.1 51.667 60 27 2 189 246 141 200 1.14e-11 66.2
MsaG035512 AT4G31550.1 54.430 79 32 2 350 427 229 304 1.34e-19 90.1
MsaG035512 AT4G31550.1 53.125 64 27 3 184 245 243 305 2.02e-12 68.6
MsaG035512 AT4G31550.2 54.430 79 32 2 350 427 228 303 1.35e-19 90.1
MsaG035512 AT4G31550.2 53.125 64 27 3 184 245 242 304 2.04e-12 68.6
MsaG035512 AT4G24240.1 45.000 100 42 2 330 428 253 340 5.36e-19 88.6
MsaG035512 AT4G24240.1 50.704 71 32 3 179 247 273 342 1.14e-13 72.8
MsaG035512 AT2G46130.2 52.632 76 32 1 351 426 11 82 5.83e-19 82.4
MsaG035512 AT2G46130.2 56.140 57 20 2 188 243 30 82 1.69e-11 61.2
MsaG035512 AT5G52830.1 42.574 101 57 1 349 448 144 244 8.80e-19 88.2
MsaG035512 AT5G28650.1 54.930 71 31 1 367 436 259 329 1.85e-18 86.7
MsaG035512 AT5G28650.1 47.222 72 33 3 184 250 255 326 2.67e-12 68.2
MsaG035512 AT4G01250.1 57.353 68 28 1 368 434 126 193 1.93e-18 86.3
MsaG035512 AT3G04670.1 54.167 72 32 1 367 437 259 330 3.28e-18 86.3
MsaG035512 AT3G04670.1 48.611 72 32 3 184 250 255 326 7.51e-13 70.1
MsaG035512 AT2G24570.1 52.564 78 33 2 350 426 226 300 5.66e-18 85.1
MsaG035512 AT2G24570.1 47.436 78 38 3 184 259 240 316 4.17e-13 70.9
MsaG035512 AT1G80840.1 48.571 70 35 1 368 436 144 213 6.20e-18 84.7
MsaG035512 AT2G25000.2 51.562 64 30 1 369 431 102 165 7.12e-18 83.2
MsaG035512 AT2G25000.4 51.562 64 30 1 369 431 102 165 7.12e-18 83.2
MsaG035512 AT5G43290.1 34.091 132 84 1 295 426 42 170 7.83e-18 84.0
MsaG035512 AT5G43290.1 32.370 173 103 3 156 314 82 254 1.75e-15 77.0
MsaG035512 AT2G30590.1 60.656 61 23 1 367 426 310 370 9.38e-18 85.5
MsaG035512 AT2G30590.1 53.125 64 27 3 184 245 310 372 6.37e-13 70.5
MsaG035512 AT2G34830.1 53.846 65 29 1 371 434 216 280 1.23e-17 85.5
MsaG035512 AT2G25000.3 51.562 64 30 1 369 431 124 187 1.30e-17 82.8
MsaG035512 AT2G34830.2 53.846 65 29 1 371 434 225 289 1.41e-17 85.5
MsaG035512 AT2G25000.1 51.562 64 30 1 369 431 145 208 1.84e-17 82.8
MsaG035512 AT4G31800.2 51.562 64 30 1 369 431 110 173 2.53e-17 82.0
MsaG035512 AT4G31800.2 47.619 63 31 2 189 249 112 174 2.01e-11 64.7
MsaG035512 AT3G58710.2 42.105 114 56 4 331 440 36 143 2.68e-17 82.4
MsaG035512 AT1G30650.1 53.846 65 29 1 371 434 218 282 3.93e-17 84.0
MsaG035512 AT3G58710.1 41.739 115 56 4 331 440 36 144 3.94e-17 82.0
MsaG035512 AT4G31800.1 53.226 62 28 1 371 431 177 238 4.21e-17 82.4
MsaG035512 AT4G31800.1 48.387 62 30 2 189 248 177 238 3.35e-11 64.7
MsaG035512 AT5G45050.4 53.846 65 29 1 371 434 1042 1106 2.36e-16 82.8
MsaG035512 AT5G45050.1 53.846 65 29 1 371 434 1181 1245 2.38e-16 82.8
MsaG035512 AT5G45050.2 53.846 65 29 1 371 434 1153 1217 2.65e-16 82.8
MsaG035512 AT1G29280.1 42.574 101 47 3 332 429 42 134 3.83e-16 78.6
MsaG035512 AT1G29280.1 48.485 66 32 2 186 249 72 137 2.49e-13 70.5
MsaG035512 AT1G69810.2 36.434 129 77 4 317 443 93 218 3.64e-15 77.0
MsaG035512 AT1G69810.1 36.434 129 77 4 317 443 151 276 4.45e-15 77.4
MsaG035512 AT2G40740.1 50.794 63 27 2 184 242 169 231 5.24e-15 75.9
MsaG035512 AT2G40740.1 35.185 108 54 3 370 466 173 275 6.21e-11 63.9
MsaG035512 AT2G40740.3 50.794 63 27 2 184 242 178 240 7.49e-15 75.5
MsaG035512 AT2G40740.3 35.185 108 54 3 370 466 182 284 7.77e-11 63.5
MsaG035512 AT1G66560.1 44.286 70 36 1 370 436 103 172 2.95e-13 70.1
MsaG035512 AT4G23810.1 45.312 64 31 2 183 242 153 216 4.17e-13 70.9
MsaG035512 AT2G46400.1 40.506 79 44 1 349 424 83 161 9.04e-13 69.3
MsaG035512 AT4G11070.2 42.667 75 37 3 183 251 104 178 4.55e-12 67.0
MsaG035512 AT1G66550.2 35.227 88 54 1 370 454 103 190 5.43e-12 66.2
MsaG035512 AT1G66550.1 35.227 88 54 1 370 454 108 195 6.01e-12 66.2
MsaG035512 AT5G24110.1 42.857 63 32 2 183 241 108 170 6.55e-12 67.0
MsaG035512 AT4G11070.1 42.667 75 37 3 183 251 136 210 6.64e-12 67.0
MsaG035512 AT5G45260.1 33.333 120 68 4 329 443 1172 1284 7.94e-12 68.6
MsaG035512 AT1G80590.1 36.782 87 50 2 371 454 86 170 9.59e-11 62.4

Find 130 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTTTGCACAATAATTT+TGG 0.075608 7:+15211640 None:intergenic
ACAGAGTAGGCCTATGAATT+TGG 0.222415 7:-15214829 MsaT035512.1:CDS
TCTTCATCTTCTTCCCTTGC+TGG 0.224677 7:-15214909 MsaT035512.1:CDS
CCTCCTGGTTTGAGTCCTTC+TGG 0.239836 7:-15214777 MsaT035512.1:CDS
AAGAAGTGAAGTTGATCTTT+TGG 0.241380 7:-15211621 MsaT035512.1:CDS
GGCTCTGGCGGCGAAGAATC+AGG 0.263687 7:+15212238 None:intergenic
GATGATGGTGGGTCCCTTAA+TGG 0.295876 7:-15214861 MsaT035512.1:CDS
GGCTACAACTGGCGTAAGTA+TGG 0.299845 7:-15212532 MsaT035512.1:CDS
TATGAGACCGGCTGGTATTC+AGG 0.304475 7:+15212736 None:intergenic
TACGTAGTTATGACAGCTTT+TGG 0.304939 7:+15209451 None:intergenic
ACCTTCTCTCAGCTTCTTGC+TGG 0.306616 7:-15214957 MsaT035512.1:CDS
GCACCCTTTGCTTAAAGATA+TGG 0.306944 7:-15209323 MsaT035512.1:CDS
GGTGCTGCCACTTGCTGCTC+TGG 0.314201 7:+15212658 None:intergenic
AGTCGGTAATGCAGAGAATA+AGG 0.319523 7:-15212149 MsaT035512.1:CDS
TCAAACTCACAAGGCTGGTT+TGG 0.329319 7:-15212289 MsaT035512.1:CDS
AGCGCAAATGTACAGGTCTT+TGG 0.331525 7:+15209284 None:intergenic
TTCTGAGATGGAGGTACTTC+AGG 0.332008 7:+15211677 None:intergenic
CTGTTTGAACCCACCATTAA+GGG 0.333721 7:+15214848 None:intergenic
CAATGTATACAGAGCCCCTT+TGG 0.338611 7:-15212835 MsaT035512.1:intron
GCAATTCTAGCTTCTGATAC+AGG 0.339882 7:+15212637 None:intergenic
ATAACTGAAATTATCTATAA+AGG 0.355344 7:-15212406 MsaT035512.1:CDS
TGGCTGCTGTTTCTAGCAGC+AGG 0.368911 7:+15209403 None:intergenic
ACTTGCCTTCTCTTAGGGTT+TGG 0.383067 7:+15212106 None:intergenic
GGCTACAGATGGAGAAAGTA+TGG 0.390807 7:-15211593 MsaT035512.1:CDS
TGCTCTACCAATCGTTCAGT+GGG 0.398511 7:+15212706 None:intergenic
CTTTGGGATGTCACACCAAC+AGG 0.401538 7:-15212818 MsaT035512.1:CDS
TTAAGCAAAGGGTGCTTCTC+TGG 0.402684 7:+15209331 None:intergenic
TCTGTTTGAACCCACCATTA+AGG 0.415417 7:+15214847 None:intergenic
AGCTGTCATAACTACGTATG+AGG 0.415891 7:-15209446 MsaT035512.1:CDS
TTGCTTAAAGATATGGAGTT+CGG 0.416668 7:-15209316 MsaT035512.1:CDS
GCCATCAAAACCACAGGCTT+TGG 0.423416 7:-15209356 MsaT035512.1:CDS
ATGAGAAGCCTCTGGCGAAT+AGG 0.423544 7:-15212372 MsaT035512.1:CDS
AAGCTTGAAACAAGTGTCAT+AGG 0.423831 7:+15214999 None:intergenic
CTTGCTGGTGAATATAGTTA+TGG 0.423938 7:-15214894 MsaT035512.1:CDS
TCAGCTTCTTGCTGGTGCTA+TGG 0.437218 7:-15214949 MsaT035512.1:CDS
AGAAGCTAGAATTGCTCAAA+TGG 0.441571 7:-15212629 MsaT035512.1:CDS
TCATCTGCAGGTTTGTCAAT+AGG 0.444331 7:+15212556 None:intergenic
TATTACAAGTGCACTAGTGC+AGG 0.448861 7:-15209514 MsaT035512.1:CDS
GTCAGGTCACTCTCAGGCTC+TGG 0.450848 7:+15212223 None:intergenic
TAGCCCCTTGATTGGATGTC+AGG 0.455071 7:+15212206 None:intergenic
CTGCAGATGACGGCTACAAC+TGG 0.458752 7:-15212543 MsaT035512.1:CDS
TGTGAGTTTGAGTCAGACTT+AGG 0.459987 7:+15212301 None:intergenic
TTGTCAATAGGTAGGGAAGA+TGG 0.466953 7:+15212568 None:intergenic
CGAGCAATAACCAAATTCAT+AGG 0.472310 7:+15214819 None:intergenic
ATTTCAGTTATGTGACCGTC+AGG 0.478963 7:+15212418 None:intergenic
TCTTTCAAGCGCAAATGTAC+AGG 0.481462 7:+15209277 None:intergenic
GAGGCTTCTCATGGTTATGC+TGG 0.482519 7:+15212383 None:intergenic
TTGGATGTCAGGTCACTCTC+AGG 0.484478 7:+15212217 None:intergenic
CAGTTGTAGCCGTCATCTGC+AGG 0.487042 7:+15212544 None:intergenic
GTCTTTCAGGAGCACTGAAC+CGG 0.497853 7:-15211705 MsaT035512.1:intron
TGGTCTGATAGCCCCTTGAT+TGG 0.499177 7:+15212198 None:intergenic
AATGTATACAGAGCCCCTTT+GGG 0.503601 7:-15212834 MsaT035512.1:intron
GAAAACAATAGTGACTTGAA+TGG 0.505209 7:-15212340 MsaT035512.1:CDS
GATGGTGGGTCCCTTAATGG+TGG 0.511624 7:-15214858 MsaT035512.1:CDS
TAACGCAATCACCTTGGATG+AGG 0.519067 7:+15211548 None:intergenic
CTGCAGGTTTGTCAATAGGT+AGG 0.521970 7:+15212560 None:intergenic
ACTCCATATCTTTAAGCAAA+GGG 0.522555 7:+15209320 None:intergenic
ACACCAACAGGCTTTAGCTC+AGG 0.523835 7:-15212806 MsaT035512.1:CDS
TAATGCAGAGAATAAGGAAG+AGG 0.525319 7:-15212143 MsaT035512.1:CDS
CTCTCACTTGATCCAGGTCG+TGG 0.526754 7:+15212178 None:intergenic
GCTCTGGCGGCGAAGAATCA+GGG 0.528117 7:+15212239 None:intergenic
CTGCTCTACCAATCGTTCAG+TGG 0.530315 7:+15212705 None:intergenic
TCTGTGACAGTCTTCTGAGA+TGG 0.533538 7:+15211665 None:intergenic
TGTTGGTGTGACATCCCAAA+GGG 0.541113 7:+15212820 None:intergenic
GGGCTTCGTATGAGACCGGC+TGG 0.543970 7:+15212728 None:intergenic
TCCTCACTCTCACTTGATCC+AGG 0.545744 7:+15212172 None:intergenic
TGCAGGTTTGTCAATAGGTA+GGG 0.549304 7:+15212561 None:intergenic
GAGAAAGTATGGTCAGAAAG+TGG 0.552442 7:-15211582 MsaT035512.1:CDS
AGTGACCTGACATCCAATCA+AGG 0.552843 7:-15212211 MsaT035512.1:CDS
TATGGGCAAAAGCAGGTCAA+AGG 0.553168 7:-15212514 MsaT035512.1:CDS
TATTCGCCAGAGGCTTCTCA+TGG 0.554963 7:+15212374 None:intergenic
AATTGCTACTAGCTGTGTTG+TGG 0.558213 7:+15209383 None:intergenic
GCATAACCATGAGAAGCCTC+TGG 0.564979 7:-15212380 MsaT035512.1:CDS
GGCTGCTGTTTCTAGCAGCA+GGG 0.565081 7:+15209404 None:intergenic
TTCAATGCCATCAAAACCAC+AGG 0.565251 7:-15209362 MsaT035512.1:CDS
ATGGGCAAAAGCAGGTCAAA+GGG 0.565555 7:-15212513 MsaT035512.1:CDS
AGCAAGAAGCTGAGAGAAGG+TGG 0.567351 7:+15214959 None:intergenic
ACCAGCAAGAAGCTGAGAGA+AGG 0.568077 7:+15214956 None:intergenic
GCGTAAGTATGGGCAAAAGC+AGG 0.571769 7:-15212521 MsaT035512.1:CDS
AAACCAGAAGGACTCAAACC+AGG 0.575799 7:+15214774 None:intergenic
GAAGCCTCTGGCGAATAGGC+GGG 0.576381 7:-15212368 MsaT035512.1:CDS
GAAGATGAAGAGAAAGCAAG+AGG 0.579148 7:+15214921 None:intergenic
CTGACTCAAACTCACAAGGC+TGG 0.581200 7:-15212294 MsaT035512.1:CDS
GTATGGTCAGAAAGTGGTGA+AGG 0.582502 7:-15211576 MsaT035512.1:CDS
ATATAGTTATGGTGGTAAAG+AGG 0.582591 7:-15214883 MsaT035512.1:CDS
GCTGTCATAACTACGTATGA+GGG 0.583563 7:-15209445 MsaT035512.1:CDS
AGAAGCCTCTGGCGAATAGG+CGG 0.584580 7:-15212369 MsaT035512.1:CDS
ATGGTGGGTCCCTTAATGGT+GGG 0.587225 7:-15214857 MsaT035512.1:CDS
GGAGGTACTTCAGGAACCGC+CGG 0.588740 7:+15211686 None:intergenic
TGAAGCTCCAGAGCAGCAAG+TGG 0.591243 7:-15212665 MsaT035512.1:CDS
GGTGGTAAAGAGGATGATGG+TGG 0.591276 7:-15214873 MsaT035512.1:CDS
TTCTCTGGTACCAAAGCCTG+TGG 0.591403 7:+15209346 None:intergenic
AAAGTTGAGCGTGCACCTGA+CGG 0.592511 7:-15212433 MsaT035512.1:CDS
TTGACCCGCCTATTCGCCAG+AGG 0.595547 7:+15212364 None:intergenic
TATGGTCAGAAAGTGGTGAA+GGG 0.596197 7:-15211575 MsaT035512.1:CDS
AACTCCATATCTTTAAGCAA+AGG 0.596983 7:+15209319 None:intergenic
TCAAAGGGAGCGAGTATCCA+CGG 0.597647 7:-15212498 MsaT035512.1:CDS
GTGACCTGACATCCAATCAA+GGG 0.600848 7:-15212210 MsaT035512.1:CDS
CTCTACCAATCGTTCAGTGG+GGG 0.606161 7:+15212708 None:intergenic
AGGTCACTCTCAGGCTCTGG+CGG 0.607872 7:+15212226 None:intergenic
ATTGACAAACCTGCAGATGA+CGG 0.609202 7:-15212553 MsaT035512.1:CDS
TTTCAGGAGCACTGAACCGG+CGG 0.612903 7:-15211702 MsaT035512.1:intron
CATAACTATATTCACCAGCA+AGG 0.613727 7:+15214895 None:intergenic
ACCTGGATCAAGTGAGAGTG+AGG 0.614136 7:-15212173 MsaT035512.1:CDS
ACATGTCGAGAGAGCATCAA+CGG 0.615250 7:-15209476 MsaT035512.1:CDS
TATGGTGGTAAAGAGGATGA+TGG 0.615581 7:-15214876 MsaT035512.1:CDS
GGGGCTATCAGACCACGACC+TGG 0.616442 7:-15212190 MsaT035512.1:CDS
GTGAGCCAAACCCTAAGAGA+AGG 0.619230 7:-15212111 MsaT035512.1:intron
GCTACAACTGGCGTAAGTAT+GGG 0.619412 7:-15212531 MsaT035512.1:CDS
ATAACTATATTCACCAGCAA+GGG 0.620679 7:+15214896 None:intergenic
ATTACAAGTGCACTAGTGCA+GGG 0.624125 7:-15209513 MsaT035512.1:CDS
AATGCAGAGAATAAGGAAGA+GGG 0.624503 7:-15212142 MsaT035512.1:CDS
GTGACAGTCTTCTGAGATGG+AGG 0.627629 7:+15211668 None:intergenic
ATGGTGGGTTCAAACAGAGT+AGG 0.629800 7:-15214842 MsaT035512.1:CDS
AAGAAGCTGAGAGAAGGTGG+CGG 0.633346 7:+15214962 None:intergenic
TAACCTGAGCTAAAGCCTGT+TGG 0.633996 7:+15212803 None:intergenic
TGAAGGGAAATCCTCATCCA+AGG 0.635283 7:-15211559 MsaT035512.1:intron
GCATATTATGAGATTGTGCT+AGG 0.638871 7:+15212767 None:intergenic
CTGTTGGTGTGACATCCCAA+AGG 0.648368 7:+15212819 None:intergenic
CATGCAACCTGAATACCAGC+CGG 0.650592 7:-15212743 MsaT035512.1:CDS
TCAAGTGAGAGTGAGGAAGT+CGG 0.661722 7:-15212166 MsaT035512.1:CDS
GGAGAGTTAAGAAAACCAGA+AGG 0.664457 7:+15214762 None:intergenic
TGACCTGACATCCAATCAAG+GGG 0.668410 7:-15212209 MsaT035512.1:CDS
GTGGTAAAGAGGATGATGGT+GGG 0.669463 7:-15214872 MsaT035512.1:CDS
AAGTCTGACTCAAACTCACA+AGG 0.672355 7:-15212298 MsaT035512.1:CDS
GTTGGTGTGACATCCCAAAG+GGG 0.679816 7:+15212821 None:intergenic
GCTGGTGAATATAGTTATGG+TGG 0.682108 7:-15214891 MsaT035512.1:CDS
GCTCTACCAATCGTTCAGTG+GGG 0.682396 7:+15212707 None:intergenic
CCAGAAGGACTCAAACCAGG+AGG 0.725995 7:+15214777 None:intergenic
GTGCATTTGTAGTAGCTCCG+TGG 0.754411 7:+15212481 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 15209258 15215018 15209258 ID=MsaG035512
Chr7 mRNA 15209258 15215018 15209258 ID=MsaT035512.1;Parent=MsaG035512
Chr7 exon 15209258 15209540 15209258 ID=MsaT035512.1.exon4;Parent=MsaT035512.1
Chr7 CDS 15209258 15209540 15209258 ID=cds.MsaT035512.1;Parent=MsaT035512.1
Chr7 exon 15211560 15211718 15211560 ID=MsaT035512.1.exon3;Parent=MsaT035512.1
Chr7 CDS 15211560 15211718 15211560 ID=cds.MsaT035512.1;Parent=MsaT035512.1
Chr7 exon 15212112 15212845 15212112 ID=MsaT035512.1.exon2;Parent=MsaT035512.1
Chr7 CDS 15212112 15212845 15212112 ID=cds.MsaT035512.1;Parent=MsaT035512.1
Chr7 exon 15214743 15215018 15214743 ID=MsaT035512.1.exon1;Parent=MsaT035512.1
Chr7 CDS 15214743 15215018 15214743 ID=cds.MsaT035512.1;Parent=MsaT035512.1
Gene Sequence

>MsaT035512.1

ATGACACTTGTTTCAAGCTTCTTTGCAACTGAATCCGCCACCTTCTCTCAGCTTCTTGCTGGTGCTATGGCTTCACCTCTTGCTTTCTCTTCATCTTCTTCCCTTGCTGGTGAATATAGTTATGGTGGTAAAGAGGATGATGGTGGGTCCCTTAATGGTGGGTTCAAACAGAGTAGGCCTATGAATTTGGTTATTGCTCGTTCTCCTGTTTTTACTGTTCCTCCTGGTTTGAGTCCTTCTGGTTTTCTTAACTCTCCTGGCTTTTTTTCACCTCAGAGCCCCTTTGGGATGTCACACCAACAGGCTTTAGCTCAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATAATATGCACATGCAACCTGAATACCAGCCGGTCTCATACGAAGCCCCCACTGAACGATTGGTAGAGCAGCCGTCTTATGCTCAAAATGAAGCTCCAGAGCAGCAAGTGGCAGCACCTGTATCAGAAGCTAGAATTGCTCAAATGGAAACATCAGAGATTGCATATTCTGATAAGAAATATCAACCATCTTCCCTACCTATTGACAAACCTGCAGATGACGGCTACAACTGGCGTAAGTATGGGCAAAAGCAGGTCAAAGGGAGCGAGTATCCACGGAGCTACTACAAATGCACACATCTGAATTGTCCAGTGAAGAAAAAAGTTGAGCGTGCACCTGACGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAGAAGCCTCTGGCGAATAGGCGGGTCAAAGAAAACAATAGTGACTTGAATGGAAATGCAAACGTTCAGCCTAAGTCTGACTCAAACTCACAAGGCTGGTTTGGAAATTCAAACAAAATTAGTGAGAGCGTCCCTGATTCTTCGCCGCCAGAGCCTGAGAGTGACCTGACATCCAATCAAGGGGCTATCAGACCACGACCTGGATCAAGTGAGAGTGAGGAAGTCGGTAATGCAGAGAATAAGGAAGAGGGAGTTGACTGTGAGCCAAACCCTAAGAGAAGGAGCACTGAACCGGCGGTTCCTGAAGTACCTCCATCTCAGAAGACTGTCACAGAACCCAAAATTATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGATGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAGTGCACTAGTGCAGGGTGCAACGTGCGTAAACATGTCGAGAGAGCATCAACGGACCCAAAAGCTGTCATAACTACGTATGAGGGAAAACATAATCATGATGTCCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAGCAATTCAATGCCATCAAAACCACAGGCTTTGGTACCAGAGAAGCACCCTTTGCTTAAAGATATGGAGTTCGGAAACAATGACCAAAGACCTGTACATTTGCGCTTGAAAGAAGAGCAAATCATTGTATAA
Protein sequence

>MsaT035512.1

MTLVSSFFATESATFSQLLAGAMASPLAFSSSSSLAGEYSYGGKEDDGGSLNGGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHNMHMQPEYQPVSYEAPTERLVEQPSYAQNEAPEQQVAAPVSEARIAQMETSEIAYSDKKYQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPLANRRVKENNSDLNGNANVQPKSDSNSQGWFGNSNKISESVPDSSPPEPESDLTSNQGAIRPRPGSSESEEVGNAENKEEGVDCEPNPKRRSTEPAVPEVPPSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPSKPQALVPEKHPLLKDMEFGNNDQRPVHLRLKEEQIIV*