AlfalfaGEDB | MsaG035539

M. sativa ssp. caerulea / MsaG035539

KEGG: K07198
GO: GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007584 GO:0008150 GO:0008152 GO:0009593 GO:0009594 GO:0009605 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009756 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010050 GO:0010150 GO:0010182 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071396 GO:0071495 GO:0071704 GO:0080022 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG035539	XP_010688198.1	36.538	312	113	5	7	244	108	408	1.20e-46	175

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG035539	sp\|Q38997\|KIN10_ARATH	34.936	312	118	5	7	244	108	408	1.41e-46	167

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG035539	tr\|A0A834YLK4\|A0A834YLK4_9MAGN	35.783	313	115	5	7	244	96	397	3.28e-46	172

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000370	MsaG035539	0.872266	7.439065e-67	9.494466e-64
MsaG000402	MsaG035539	0.829773	7.665449e-55	2.204019e-52
MsaG000977	MsaG035539	0.873714	2.446772e-67	3.325810e-64
MsaG001878	MsaG035539	0.839515	2.790987e-57	1.073055e-54
MsaG003478	MsaG035539	0.831983	2.213690e-55	6.784286e-53
MsaG004353	MsaG035539	0.807396	8.767001e-50	1.406152e-47
MsaG004514	MsaG035539	0.823706	2.119452e-53	5.147105e-51
MsaG004563	MsaG035539	0.834902	4.173286e-56	1.393792e-53
MsaG004753	MsaG035539	0.825107	9.961548e-54	2.513198e-51
MsaG004930	MsaG035539	0.860341	4.346878e-63	3.424602e-60
MsaG005005	MsaG035539	0.842520	4.575565e-58	1.934866e-55
MsaG005006	MsaG035539	0.859749	6.543534e-63	5.039290e-60
MsaG005295	MsaG035539	0.811292	1.291500e-50	2.276207e-48
MsaG005510	MsaG035539	0.806240	1.534017e-49	2.394259e-47
MsaG005576	MsaG035539	0.819992	1.519563e-52	3.341449e-50
MsaG006314	MsaG035539	0.815278	1.736425e-51	3.380441e-49
MsaG006407	MsaG035539	0.814972	2.029179e-51	3.919909e-49
MsaG006729	MsaG035539	0.839645	2.583790e-57	9.974355e-55
MsaG006757	MsaG035539	0.869983	4.179267e-66	4.840316e-63
MsaG007092	MsaG035539	0.844423	1.428212e-58	6.420900e-56
MsaG007182	MsaG035539	0.801735	1.312607e-48	1.845723e-46
MsaG007314	MsaG035539	0.802842	7.783892e-49	1.122539e-46
MsaG007551	MsaG035539	0.843155	3.107542e-58	1.340975e-55
MsaG007737	MsaG035539	0.852638	7.764399e-61	4.612363e-58
MsaG008615	MsaG035539	0.812568	6.830068e-51	1.242233e-48
MsaG009688	MsaG035539	0.863542	4.593759e-64	4.095986e-61
MsaG010065	MsaG035539	0.814212	2.984406e-51	5.655818e-49
MsaG011067	MsaG035539	0.823243	2.715478e-53	6.512073e-51
MsaG011087	MsaG035539	0.814803	2.211202e-51	4.253289e-49
MsaG011132	MsaG035539	0.818375	3.533013e-52	7.445886e-50
MsaG011472	MsaG035539	0.808112	6.185184e-50	1.009269e-47
MsaG011816	MsaG035539	0.862135	1.242466e-63	1.048171e-60
MsaG012060	MsaG035539	0.806628	1.272003e-49	2.003599e-47
MsaG012163	MsaG035539	0.836908	1.300827e-56	4.614270e-54
MsaG013629	MsaG035539	0.800073	2.857178e-48	3.869504e-46
MsaG014214	MsaG035539	0.815667	1.424450e-51	2.800501e-49
MsaG014205	MsaG035539	0.809982	2.470502e-50	4.217026e-48
MsaG015333	MsaG035539	0.813320	4.681850e-51	8.676250e-49
MsaG015721	MsaG035539	0.906418	3.597257e-80	2.702603e-76
MsaG016153	MsaG035539	0.825126	9.854809e-54	2.487597e-51
MsaG016248	MsaG035539	0.808496	5.125742e-50	8.441766e-48
MsaG016290	MsaG035539	0.818959	2.607925e-52	5.580693e-50
MsaG017317	MsaG035539	0.821995	5.281396e-53	1.224640e-50
MsaG017318	MsaG035539	0.830307	5.687453e-55	1.660457e-52
MsaG018025	MsaG035539	0.843756	2.151933e-58	9.466890e-56
MsaG018078	MsaG035539	0.857559	2.929396e-62	2.077886e-59
MsaG018282	MsaG035539	0.824364	1.487889e-53	3.678465e-51
MsaG018582	MsaG035539	0.806822	1.158178e-49	1.832547e-47
MsaG018602	MsaG035539	0.874736	1.106819e-67	1.573287e-64
MsaG018714	MsaG035539	0.852661	7.648412e-61	4.547191e-58
MsaG018986	MsaG035539	0.848537	1.090147e-59	5.620678e-57
MsaG019439	MsaG035539	0.826670	4.255358e-54	1.121151e-51
MsaG019714	MsaG035539	0.818291	3.691033e-52	7.761847e-50
MsaG019770	MsaG035539	0.834710	4.661014e-56	1.547835e-53
MsaG020336	MsaG035539	0.854687	2.013148e-61	1.286101e-58
MsaG020783	MsaG035539	0.800923	1.920869e-48	2.651768e-46
MsaG020815	MsaG035539	0.812292	7.841959e-51	1.416459e-48
MsaG021703	MsaG035539	0.827209	3.167207e-54	8.470878e-52
MsaG024574	MsaG035539	0.805479	2.213338e-49	3.393074e-47
MsaG024772	MsaG035539	0.804091	4.302319e-49	6.386780e-47
MsaG026607	MsaG035539	0.830829	4.242426e-55	1.257269e-52
MsaG026786	MsaG035539	0.831861	2.371055e-55	7.241075e-53
MsaG027138	MsaG035539	0.906131	4.880268e-80	3.602853e-76
MsaG027514	MsaG035539	0.827310	2.996194e-54	8.036299e-52
MsaG027591	MsaG035539	0.891246	1.046379e-73	3.291514e-70
MsaG027763	MsaG035539	0.810880	1.584776e-50	2.764990e-48
MsaG028119	MsaG035539	0.853698	3.871965e-61	2.387836e-58
MsaG028135	MsaG035539	0.830446	5.260694e-55	1.541972e-52
MsaG029235	MsaG035539	0.817747	4.892877e-52	1.014570e-49
MsaG029382	MsaG035539	0.808884	4.239654e-50	7.048037e-48
MsaG030356	MsaG035539	0.815996	1.203631e-51	2.386181e-49
MsaG032689	MsaG035539	0.864835	1.824092e-64	1.712003e-61
MsaG032839	MsaG035539	0.844794	1.135834e-58	5.169664e-56
MsaG033534	MsaG035539	0.811137	1.394640e-50	2.448645e-48
MsaG033991	MsaG035539	0.824286	1.551686e-53	3.827940e-51
MsaG033995	MsaG035539	0.836330	1.822847e-56	6.354463e-54
MsaG034824	MsaG035539	0.881298	5.719424e-70	1.096666e-66
MsaG035363	MsaG035539	0.869640	5.402574e-66	6.167092e-63
MsaG035539	MsaG035884	0.878266	6.762471e-69	1.126775e-65
MsaG035539	MsaG036346	0.806675	1.243551e-49	1.960890e-47
MsaG035539	MsaG037871	0.817218	6.428962e-52	1.315147e-49
MsaG035539	MsaG038518	0.808505	5.103472e-50	8.406760e-48
MsaG035539	MsaG039679	0.805024	2.753427e-49	4.176820e-47
MsaG035539	MsaG039895	0.815315	1.704467e-51	3.321269e-49
MsaG035539	MsaG040713	0.847376	2.269829e-59	1.125632e-56
MsaG035539	MsaG040725	0.846529	3.862137e-59	1.861600e-56
MsaG035539	MsaG041237	0.863268	5.581870e-64	4.923101e-61
MsaG035539	MsaG043350	0.837764	7.868787e-57	2.865103e-54
MsaG035539	MsaG043755	0.818380	3.523654e-52	7.427138e-50
MsaG035539	MsaG044303	0.861235	2.332913e-63	1.901126e-60
MsaG035539	MsaG044728	0.868218	1.553140e-65	1.671781e-62
MsaG035539	MsaG045439	0.845677	6.570312e-59	3.078692e-56
MsaG035539	MsaG045493	0.830998	3.857344e-55	1.148724e-52
MsaG035539	MsaG045778	0.862767	7.956811e-64	6.881201e-61
MsaG035539	MsaG045816	0.801484	1.476518e-48	2.064381e-46
MsaG035539	MsaG046244	0.863550	4.567850e-64	4.074165e-61
MsaG035539	MsaG046155	0.814315	2.832098e-51	5.381106e-49
MsaG035539	MsaG046538	0.883024	1.359664e-70	2.830693e-67
MsaG035539	MsaG046436	0.810930	1.545568e-50	2.699900e-48
MsaG035539	MsaG046443	0.816994	7.213197e-52	1.467082e-49
MsaG035539	MsaG046696	0.808832	4.348373e-50	7.219709e-48
MsaG035539	MsaG002256	0.815525	1.531353e-51	2.999778e-49
MsaG035539	MsaG001975	0.828754	1.350324e-54	3.771435e-52
MsaG035539	MsaG001346	0.821486	6.919667e-53	1.582907e-50
MsaG035539	MsaG001555	0.844549	1.321091e-58	5.964059e-56
MsaG035539	MsaG008445	0.806073	1.663009e-49	2.585247e-47
MsaG035539	MsaG014437	0.800144	2.763830e-48	3.748976e-46
MsaG035539	MsaG012729	0.837219	1.084052e-56	3.881807e-54
MsaG035539	MsaG011732	0.823747	2.073456e-53	5.040858e-51
MsaG035539	MsaG014052	0.835949	2.274954e-56	7.839953e-54
MsaG035539	MsaG020181	0.841735	7.365154e-58	3.036927e-55
MsaG035539	MsaG030537	0.803461	5.806046e-49	8.493642e-47
MsaG035539	MsaG030572	0.813144	5.114786e-51	9.437048e-49
MsaG035539	MsaG031242	0.872566	5.912348e-67	7.644256e-64
MsaG035539	MsaG030699	0.804521	3.502914e-49	5.251962e-47
MsaG035539	MsaG031291	0.804102	4.279069e-49	6.353896e-47
MsaG035539	MsaG030436	0.890691	1.727886e-73	5.279702e-70
MsaG035539	MsaG033422	0.835682	2.656504e-56	9.081559e-54
MsaG035539	MsaG034348	0.800133	2.778686e-48	3.768152e-46
MsaG035539	MsaG031301	0.841082	1.092708e-57	4.413429e-55
MsaG035539	MsaG030744	0.838095	6.475276e-57	2.381893e-54
MsaG035539	MsaG031710	0.854009	3.154838e-61	1.967404e-58
MsaG035539	MsaG036646	0.885402	1.808034e-71	4.223401e-68
MsaG035539	MsaG036687	0.803351	6.116964e-49	8.925929e-47
MsaG035539	MsaG039635	0.825116	9.909496e-54	2.500700e-51
MsaG035539	MsaG043492	0.842365	5.029487e-58	2.116154e-55
MsaG035539	MsaG046905	0.817619	5.226864e-52	1.080265e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG035539	MtrunA17_Chr6g0453681	32.827	329	135	5	7	260	108	425	1.97e-43	155
MsaG035539	MtrunA17_Chr6g0468751	32.164	342	144	7	7	273	108	436	6.19e-42	152
MsaG035539	MtrunA17_Chr3g0132671	32.492	317	145	9	19	272	154	464	4.16e-39	144
MsaG035539	MtrunA17_Chr6g0453671	39.264	163	73	3	16	156	121	279	5.81e-30	117
MsaG035539	MtrunA17_Chr7g0218511	90.196	51	5	0	29	79	28	78	5.78e-28	103
MsaG035539	MtrunA17_Chr2g0333821	35.882	170	71	4	29	173	124	280	9.03e-24	100
MsaG035539	MtrunA17_Chr4g0001331	32.663	199	96	4	29	202	130	315	1.27e-21	94.7
MsaG035539	MtrunA17_Chr1g0150321	37.333	150	67	4	29	152	123	271	1.26e-20	91.7
MsaG035539	MtrunA17_Chr4g0063881	33.121	157	82	3	33	166	126	282	2.73e-20	90.9
MsaG035539	MtrunA17_Chr5g0441011	33.333	147	73	3	30	151	125	271	5.18e-19	87.0
MsaG035539	MtrunA17_Chr5g0428031	33.540	161	82	5	30	166	121	280	9.97e-19	86.3
MsaG035539	MtrunA17_Chr5g0399911	34.395	157	73	4	31	157	128	284	1.10e-18	85.5
MsaG035539	MtrunA17_Chr8g0380661	32.738	168	72	7	19	154	105	263	1.48e-18	84.7
MsaG035539	MtrunA17_Chr3g0131061	31.844	179	88	5	19	167	105	279	2.10e-18	84.7
MsaG035539	MtrunA17_Chr3g0107051	30.357	168	89	4	31	173	133	297	4.94e-18	84.3
MsaG035539	MtrunA17_Chr8g0385281	30.688	189	96	6	19	176	106	290	4.01e-17	80.9
MsaG035539	MtrunA17_Chr1g0166101	34.694	147	70	4	31	152	138	283	4.21e-17	81.3
MsaG035539	MtrunA17_Chr5g0432471	33.333	144	71	3	30	148	123	266	4.74e-17	81.6
MsaG035539	MtrunA17_Chr2g0304111	31.944	144	73	3	30	148	135	278	1.09e-16	80.5
MsaG035539	MtrunA17_Chr8g0346071	32.394	142	73	3	30	148	129	270	1.11e-16	80.1
MsaG035539	MtrunA17_Chr4g0013131	30.519	154	82	3	29	157	122	275	1.80e-16	79.7
MsaG035539	MtrunA17_Chr2g0277501	33.121	157	75	4	31	157	113	269	2.89e-16	78.6
MsaG035539	MtrunA17_Chr4g0059751	32.955	176	78	5	33	168	211	386	2.92e-16	79.0
MsaG035539	MtrunA17_Chr4g0069301	31.638	177	84	5	5	148	109	281	3.60e-16	79.0
MsaG035539	MtrunA17_Chr2g0284011	33.333	141	69	3	33	148	126	266	5.40e-16	78.2
MsaG035539	MtrunA17_Chr3g0114511	31.447	159	81	4	30	163	141	296	6.79e-16	78.2
MsaG035539	MtrunA17_Chr4g0072831	35.821	134	68	3	29	151	100	226	9.85e-16	76.6
MsaG035539	MtrunA17_Chr3g0107011	28.916	166	93	3	12	152	107	272	1.01e-15	77.4
MsaG035539	MtrunA17_Chr1g0205421	33.108	148	74	3	30	152	123	270	2.08e-15	76.6
MsaG035539	MtrunA17_Chr5g0432491	30.769	143	74	3	31	148	136	278	2.47e-15	76.3
MsaG035539	MtrunA17_Chr2g0302431	31.013	158	80	4	16	148	122	275	7.06e-15	75.1
MsaG035539	MtrunA17_Chr3g0123791	32.143	168	82	5	31	166	114	281	1.04e-14	73.9
MsaG035539	MtrunA17_Chr4g0055451	29.936	157	80	4	31	157	114	270	1.09e-14	73.9
MsaG035539	MtrunA17_Chr8g0379091	31.724	145	71	4	31	148	138	281	2.44e-14	73.6
MsaG035539	MtrunA17_Chr7g0244521	28.571	154	85	3	29	157	122	275	3.24e-14	73.2
MsaG035539	MtrunA17_Chr5g0444171	34.286	175	77	7	12	153	191	360	3.38e-14	73.2
MsaG035539	MtrunA17_Chr2g0284031	30.070	143	75	3	31	148	143	285	3.40e-14	73.2
MsaG035539	MtrunA17_Chr1g0176751	30.806	211	102	7	12	191	223	420	4.36e-14	72.8
MsaG035539	MtrunA17_Chr8g0381821	32.026	153	74	4	31	153	113	265	6.09e-14	71.6
MsaG035539	MtrunA17_Chr8g0346081	30.282	142	76	3	30	148	129	270	6.68e-14	72.0
MsaG035539	MtrunA17_Chr1g0190131	32.639	144	70	4	33	150	124	266	1.18e-13	70.1
MsaG035539	MtrunA17_Chr5g0402661	31.447	159	79	4	31	159	127	285	1.67e-13	70.5
MsaG035539	MtrunA17_Chr7g0245031	33.803	142	68	3	33	148	263	404	2.05e-13	70.5
MsaG035539	MtrunA17_Chr1g0188031	30.872	149	76	4	30	152	134	281	2.98e-13	70.1
MsaG035539	MtrunA17_Chr4g0074111	40.000	95	39	2	29	105	128	222	4.08e-13	69.3
MsaG035539	MtrunA17_Chr2g0326531	30.719	153	79	7	33	161	242	391	6.45e-13	68.9
MsaG035539	MtrunA17_Chr1g0157131	34.337	166	71	6	21	153	182	342	6.98e-13	68.9
MsaG035539	MtrunA17_Chr7g0274941	31.690	142	70	4	33	147	132	273	7.20e-13	68.2
MsaG035539	MtrunA17_Chr5g0426521	32.075	159	78	4	29	157	111	269	1.13e-12	67.8
MsaG035539	MtrunA17_Chr7g0244561	32.317	164	81	5	33	168	132	293	1.64e-12	67.8
MsaG035539	MtrunA17_Chr5g0441691	35.570	149	63	7	33	151	184	329	1.70e-12	67.8
MsaG035539	MtrunA17_Chr1g0162301	29.936	157	80	4	31	157	133	289	3.45e-12	66.6
MsaG035539	MtrunA17_Chr4g0055431	31.447	159	75	6	31	157	120	276	5.18e-12	65.9
MsaG035539	MtrunA17_Chr8g0385341	29.379	177	92	5	5	151	118	291	5.27e-12	66.2
MsaG035539	MtrunA17_Chr4g0029241	29.801	151	80	6	33	157	240	390	5.39e-12	66.2
MsaG035539	MtrunA17_Chr4g0045371	29.936	157	80	4	31	157	132	288	7.85e-12	65.5
MsaG035539	MtrunA17_Chr1g0203881	33.108	148	72	4	31	151	155	302	7.85e-12	65.9
MsaG035539	MtrunA17_Chr2g0321841	31.875	160	86	4	11	148	100	258	8.91e-12	66.2
MsaG035539	MtrunA17_Chr4g0045261	34.932	146	64	5	31	147	255	398	1.58e-11	65.1
MsaG035539	MtrunA17_Chr3g0132591	32.738	168	84	4	5	148	198	360	1.76e-11	64.7
MsaG035539	MtrunA17_Chr1g0170551	31.915	141	66	4	33	147	120	256	2.14e-11	65.1
MsaG035539	MtrunA17_Chr7g0257751	27.717	184	104	5	5	159	146	329	2.54e-11	64.3
MsaG035539	MtrunA17_Chr4g0059951	32.258	155	69	6	33	153	189	341	3.38e-11	63.9
MsaG035539	MtrunA17_Chr8g0374571	29.299	157	81	4	31	157	132	288	3.85e-11	63.5
MsaG035539	MtrunA17_Chr1g0173541	31.507	146	73	4	30	148	165	310	7.71e-11	62.8
MsaG035539	MtrunA17_Chr7g0267751	30.588	170	81	6	12	151	234	396	8.05e-11	62.8
MsaG035539	MtrunA17_Chr4g0051191	26.901	171	100	3	6	152	252	421	8.27e-11	62.8
MsaG035539	MtrunA17_Chr8g0374701	30.612	147	75	4	31	150	246	392	8.65e-11	62.8
MsaG035539	MtrunA17_Chr5g0402551	28.161	174	96	5	1	147	224	395	9.27e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG035539	AT3G01090.3	34.936	312	118	5	7	244	108	408	1.43e-47	167
MsaG035539	AT3G01090.1	34.936	312	118	5	7	244	108	408	1.43e-47	167
MsaG035539	AT3G01090.2	34.936	312	118	5	7	244	131	431	2.00e-47	167
MsaG035539	AT3G29160.3	38.938	226	105	3	7	210	109	323	7.80e-44	154
MsaG035539	AT3G29160.1	32.907	313	124	5	7	244	109	410	8.58e-43	154
MsaG035539	AT3G29160.2	32.907	313	124	5	7	244	109	410	8.58e-43	154
MsaG035539	AT5G39440.1	29.618	314	133	8	17	258	122	419	1.09e-36	137
MsaG035539	AT4G24400.2	35.000	160	81	4	30	166	121	280	5.87e-22	95.9
MsaG035539	AT4G24400.1	35.000	160	81	4	30	166	121	280	9.22e-22	95.5
MsaG035539	AT5G25110.1	34.667	150	71	4	29	152	153	301	7.29e-19	87.4
MsaG035539	AT5G21326.1	34.694	147	71	3	30	151	125	271	1.79e-18	85.9
MsaG035539	AT5G01810.3	32.886	149	75	3	29	152	122	270	2.14e-18	85.1
MsaG035539	AT5G35410.2	31.841	201	102	7	33	204	126	320	2.58e-18	85.1
MsaG035539	AT5G01810.1	32.886	149	75	3	29	152	122	270	2.71e-18	85.5
MsaG035539	AT5G01810.2	32.886	149	75	3	29	152	122	270	2.71e-18	85.5
MsaG035539	AT5G35410.1	31.841	201	102	7	33	204	126	320	3.13e-18	85.5
MsaG035539	AT4G30960.1	33.333	150	75	3	30	154	135	284	3.46e-18	85.1
MsaG035539	AT2G26980.1	32.432	148	75	3	29	151	125	272	3.58e-18	84.7
MsaG035539	AT2G26980.5	32.432	148	75	3	29	151	125	272	4.08e-18	84.7
MsaG035539	AT2G26980.3	32.653	147	74	3	30	151	126	272	4.73e-18	84.7
MsaG035539	AT1G30270.3	32.639	144	72	3	30	148	46	189	5.02e-18	84.3
MsaG035539	AT2G26980.4	32.432	148	75	3	29	151	135	282	5.10e-18	84.7
MsaG035539	AT1G30270.1	32.639	144	72	3	30	148	143	286	5.38e-18	84.7
MsaG035539	AT5G10930.1	33.333	150	73	4	29	152	123	271	5.75e-18	84.7
MsaG035539	AT1G30270.2	32.639	144	72	3	30	148	143	286	5.81e-18	84.7
MsaG035539	AT1G48260.2	32.402	179	84	5	6	151	10	184	6.18e-18	83.6
MsaG035539	AT1G48260.4	32.402	179	84	5	6	151	10	184	6.18e-18	83.6
MsaG035539	AT1G48260.3	32.402	179	84	5	6	151	10	184	6.18e-18	83.6
MsaG035539	AT1G48260.5	32.402	179	84	5	6	151	10	184	6.18e-18	83.6
MsaG035539	AT1G48260.1	33.540	161	78	4	16	151	113	269	6.21e-18	84.3
MsaG035539	AT2G30360.1	31.250	160	78	4	31	165	135	287	7.74e-18	84.0
MsaG035539	AT3G23000.1	33.333	147	72	4	31	152	139	284	8.53e-18	84.0
MsaG035539	AT5G21222.1	34.694	147	71	3	30	151	125	271	1.17e-17	84.3
MsaG035539	AT5G21222.2	34.694	147	71	3	30	151	125	271	1.17e-17	84.3
MsaG035539	AT5G21222.4	34.694	147	71	3	30	151	125	271	1.17e-17	84.3
MsaG035539	AT5G21222.3	34.694	147	71	3	30	151	125	271	1.17e-17	84.3
MsaG035539	AT3G17510.2	34.965	143	68	3	31	148	53	195	2.58e-17	82.0
MsaG035539	AT3G17510.1	34.965	143	68	3	31	148	133	275	3.02e-17	82.4
MsaG035539	AT5G57630.3	33.803	142	71	3	30	148	35	176	6.19e-17	80.5
MsaG035539	AT5G57630.2	33.803	142	71	3	30	148	123	264	7.90e-17	80.9
MsaG035539	AT5G57630.1	33.803	142	71	3	30	148	123	264	8.89e-17	80.9
MsaG035539	AT2G25090.1	34.437	151	67	4	30	148	128	278	1.31e-16	80.5
MsaG035539	AT5G58380.1	31.757	148	76	3	30	152	123	270	1.62e-16	80.5
MsaG035539	AT2G34180.1	34.266	143	69	3	31	148	169	311	5.46e-16	79.0
MsaG035539	AT1G60940.1	33.540	161	69	6	31	157	113	269	7.44e-16	77.8
MsaG035539	AT1G60940.2	33.540	161	69	6	31	157	113	269	7.44e-16	77.8
MsaG035539	AT2G26980.2	33.083	133	64	3	29	136	125	257	7.77e-16	76.6
MsaG035539	AT1G01140.1	30.556	144	75	3	30	148	131	274	1.19e-15	77.8
MsaG035539	AT1G01140.3	30.556	144	75	3	30	148	131	274	1.22e-15	77.8
MsaG035539	AT1G01140.2	30.137	146	75	3	30	148	131	276	1.98e-15	77.0
MsaG035539	AT1G10940.2	32.484	157	76	4	31	157	121	277	3.86e-15	75.9
MsaG035539	AT1G29230.1	31.724	145	74	3	29	148	184	328	4.05e-15	76.3
MsaG035539	AT1G10940.1	32.484	157	76	4	31	157	113	269	4.25e-15	75.5
MsaG035539	AT4G18700.1	30.070	143	75	3	31	148	138	280	4.98e-15	75.9
MsaG035539	AT5G08590.2	29.775	178	95	4	30	177	36	213	6.56e-15	73.9
MsaG035539	AT5G08590.1	29.775	178	95	4	30	177	112	289	8.82e-15	74.7
MsaG035539	AT4G14580.1	31.293	147	76	3	31	152	135	281	1.25e-14	74.7
MsaG035539	AT3G08720.1	33.129	163	84	3	33	170	255	417	1.42e-14	74.7
MsaG035539	AT3G08720.3	33.129	163	84	3	33	170	255	417	1.42e-14	74.7
MsaG035539	AT3G08720.4	33.129	163	84	3	33	170	255	417	1.42e-14	74.7
MsaG035539	AT3G08720.2	33.129	163	84	3	33	170	255	417	1.42e-14	74.7
MsaG035539	AT1G12680.1	35.374	147	69	4	31	151	214	360	3.55e-14	73.2
MsaG035539	AT4G40010.1	33.108	148	69	4	31	148	113	260	4.33e-14	72.4
MsaG035539	AT5G45820.1	31.250	144	74	3	30	148	123	266	5.70e-14	72.8
MsaG035539	AT1G12580.1	34.247	146	69	4	30	148	157	302	5.78e-14	72.8
MsaG035539	AT5G63650.1	31.447	159	79	4	29	157	111	269	6.73e-14	72.0
MsaG035539	AT1G61950.1	30.270	185	90	6	5	153	186	367	2.41e-13	70.9
MsaG035539	AT4G04740.2	30.488	164	81	6	15	148	167	327	2.49e-13	70.9
MsaG035539	AT4G33950.2	31.013	158	79	4	31	158	130	287	2.84e-13	70.1
MsaG035539	AT5G12180.1	30.000	200	101	6	33	202	189	379	3.09e-13	70.5
MsaG035539	AT4G33950.1	31.013	158	79	4	31	158	130	287	3.45e-13	70.1
MsaG035539	AT4G04740.4	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT4G04740.6	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT4G04740.5	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT4G04740.3	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT4G04740.1	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT4G04740.7	30.488	164	81	6	15	148	167	327	3.47e-13	70.5
MsaG035539	AT3G20410.2	34.416	154	67	6	33	153	207	359	7.00e-13	69.7
MsaG035539	AT3G20410.1	34.416	154	67	6	33	153	207	359	7.00e-13	69.7
MsaG035539	AT3G08730.1	32.624	141	70	3	33	148	249	389	7.53e-13	69.3
MsaG035539	AT3G08730.2	32.624	141	70	3	33	148	249	389	7.53e-13	69.3
MsaG035539	AT2G38490.1	31.724	145	74	3	29	148	138	282	1.04e-12	68.9
MsaG035539	AT2G23030.1	28.415	183	97	5	19	171	105	283	1.15e-12	68.2
MsaG035539	AT5G45810.1	28.966	145	78	3	29	148	138	282	2.12e-12	68.2
MsaG035539	AT4G21940.1	31.707	164	79	5	15	148	200	360	2.28e-12	68.2
MsaG035539	AT4G21940.3	31.707	164	79	5	15	148	200	360	2.38e-12	67.8
MsaG035539	AT4G21940.2	31.707	164	79	5	15	148	200	360	2.69e-12	67.8
MsaG035539	AT4G04720.2	31.098	164	80	5	15	148	178	338	2.74e-12	67.8
MsaG035539	AT4G04720.1	31.098	164	80	5	15	148	178	338	2.74e-12	67.8
MsaG035539	AT1G50700.3	32.692	156	67	6	33	153	189	341	4.09e-12	67.0
MsaG035539	AT1G50700.1	32.692	156	67	6	33	153	189	341	4.81e-12	67.0
MsaG035539	AT1G50700.2	32.692	156	67	6	33	153	189	341	5.43e-12	67.0
MsaG035539	AT5G60550.1	26.950	141	76	4	33	147	230	369	6.24e-12	66.2
MsaG035539	AT1G50240.3	31.944	144	68	4	30	147	116	255	6.86e-12	67.0
MsaG035539	AT1G50240.2	31.944	144	68	4	30	147	116	255	6.86e-12	67.0
MsaG035539	AT2G35890.2	32.192	146	66	4	33	148	248	390	1.66e-11	65.5
MsaG035539	AT2G35890.1	32.192	146	66	4	33	148	248	390	1.66e-11	65.5
MsaG035539	AT3G51850.3	28.655	171	95	4	5	148	142	312	1.73e-11	65.1
MsaG035539	AT4G36070.1	28.141	199	108	8	33	203	189	380	1.86e-11	65.1
MsaG035539	AT4G36070.2	28.141	199	108	8	33	203	189	380	2.08e-11	65.1
MsaG035539	AT3G50530.1	31.944	144	71	4	31	147	266	409	2.21e-11	65.1
MsaG035539	AT2G45490.1	29.861	144	76	3	31	151	135	276	2.30e-11	63.9
MsaG035539	AT2G38910.1	33.553	152	68	5	30	151	247	395	2.47e-11	65.1
MsaG035539	AT3G51850.1	28.736	174	91	4	5	148	142	312	2.76e-11	64.7
MsaG035539	AT3G51850.2	28.655	171	95	4	5	148	142	312	3.05e-11	64.7
MsaG035539	AT2G17290.1	33.108	148	72	5	29	149	197	344	3.16e-11	64.7
MsaG035539	AT2G17290.2	33.108	148	72	5	29	149	197	344	3.16e-11	64.7
MsaG035539	AT3G19100.1	32.877	146	71	4	31	149	262	407	3.54e-11	64.3
MsaG035539	AT5G23580.1	33.333	168	79	5	12	151	121	283	3.85e-11	64.3
MsaG035539	AT4G09570.1	32.530	166	75	5	12	147	124	282	4.05e-11	64.3
MsaG035539	AT1G18890.1	31.724	145	68	4	33	148	179	321	4.67e-11	63.9
MsaG035539	AT1G49580.1	31.579	152	74	5	31	152	268	419	4.80e-11	63.9
MsaG035539	AT2G41860.1	28.655	171	95	4	5	148	142	312	5.17e-11	63.9
MsaG035539	AT4G38230.4	30.719	153	73	4	29	151	136	285	6.57e-11	63.5
MsaG035539	AT4G38230.3	30.719	153	73	4	29	151	136	285	6.57e-11	63.5
MsaG035539	AT2G41860.2	28.655	171	95	4	5	148	142	312	7.03e-11	63.5
MsaG035539	AT4G38230.2	30.719	153	73	4	29	151	166	315	7.09e-11	63.5
MsaG035539	AT2G17890.1	28.788	198	106	8	33	202	226	416	7.74e-11	63.5
MsaG035539	AT5G07070.1	32.215	149	76	3	29	152	122	270	7.76e-11	63.2

Find 73 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGAATATGTTAGTTGAAAT+TGG	0.146112	7:-15630306	MsaT035539.1:CDS
CATCCCACTTATCAATTCTT+TGG	0.244961	7:+15630543	None:intergenic
CGGCCCTGTCGAAGTCTATT+TGG	0.262696	7:+15630422	None:intergenic
CTATGTCAACAAGCTCCTTT+TGG	0.281589	7:-15630741	MsaT035539.1:CDS
CTGTCTAGTTCTCCAGTTAT+AGG	0.285771	7:+15629299	None:intergenic
TACGGACCTTCCTCGTTACT+TGG	0.303092	7:-15630458	MsaT035539.1:CDS
TTCGACAGGGCCGTGAGTTT+TGG	0.323395	7:-15630412	MsaT035539.1:CDS
CGTCTTGTCTCCCTTCTCTA+TGG	0.334383	7:+15630256	None:intergenic
TGTACTCAAGTTTGAACTTC+AGG	0.334707	7:-15629241	MsaT035539.1:intron
CTTCCTAGTTATCTATCTTC+TGG	0.338162	7:-15630568	MsaT035539.1:CDS
ACAGTATATTCTCAGGTTTA+AGG	0.339212	7:+15631102	None:intergenic
AAAGAATTGGTCCCTATAAC+TGG	0.345956	7:-15629311	MsaT035539.1:CDS
AATGTGAAGCTAGCTGATTT+TGG	0.355745	7:-15631065	MsaT035539.1:CDS
AAAGTGGTTCCTTGCGATTC+AGG	0.361430	7:-15629681	MsaT035539.1:intron
TCTGGATACTGAGGACTTCC+AGG	0.362421	7:+15630999	None:intergenic
AGACAGGAGGTTAGCAATCT+TGG	0.376131	7:-15629282	MsaT035539.1:CDS
ACCTCTTCCATCATGTCTAA+TGG	0.384618	7:+15629368	None:intergenic
CACACCAGTTCCTTTCTAAC+CGG	0.404153	7:+15627576	None:intergenic
TGTCTAGTTCTCCAGTTATA+GGG	0.422889	7:+15629300	None:intergenic
GGATTTGAGTTCAAGTTTGT+AGG	0.425544	7:-15627604	MsaT035539.1:CDS
GATGTACAAACCTCAGGATC+TGG	0.439271	7:+15630981	None:intergenic
CATGTATGTTGGAAAAGAAT+TGG	0.443309	7:-15629324	MsaT035539.1:CDS
CAGTAAACGTATAGTACATT+TGG	0.444981	7:-15631126	MsaT035539.1:CDS
CAAAGCAAGATTTACTCATC+CGG	0.449801	7:+15629904	None:intergenic
TTCAAGTTTGTAGGCCTAGC+CGG	0.456926	7:-15627595	MsaT035539.1:CDS
GATCATGAATATGCAACAAT+TGG	0.466000	7:-15627670	MsaT035539.1:CDS
CATGAATATGCAACAATTGG+TGG	0.470532	7:-15627667	MsaT035539.1:CDS
AGCTCCTCCATTAGACATGA+TGG	0.490767	7:-15629375	MsaT035539.1:CDS
GGACCTTCCTCGTTACTTGG+TGG	0.500239	7:-15630455	MsaT035539.1:CDS
ACAGCCAAATAGACTTCGAC+AGG	0.501694	7:-15630426	MsaT035539.1:CDS
GACCTTCCTCGTTACTTGGT+GGG	0.503408	7:-15630454	MsaT035539.1:CDS
TGGAAGAGGTCTCAGAGCTA+TGG	0.510029	7:-15629355	MsaT035539.1:CDS
CAACATATAATCAAACTGAA+TGG	0.516754	7:-15627625	MsaT035539.1:CDS
ATTGATAAGTGGGATGCTTA+CGG	0.524008	7:-15630536	MsaT035539.1:CDS
GCGTCCAACAGTATATTCTC+AGG	0.527929	7:+15631095	None:intergenic
AAAGCATCCTTGGTTTGCTA+CGG	0.531440	7:-15630476	MsaT035539.1:CDS
CTAATAGAACTCCATAGAGA+AGG	0.537831	7:-15630267	MsaT035539.1:CDS
TCCATTAGACATGATGGAAG+AGG	0.544416	7:-15629369	MsaT035539.1:CDS
TAAACCTGAGAATATACTGT+TGG	0.550416	7:-15631099	MsaT035539.1:CDS
GGAAGAGGTCTCAGAGCTAT+GGG	0.551944	7:-15629354	MsaT035539.1:CDS
GCACCAGAAGATAGATAACT+AGG	0.556831	7:+15630565	None:intergenic
CTATAACTGGAGAACTAGAC+AGG	0.557574	7:-15629298	MsaT035539.1:CDS
TATCGAGTGGAAGACAAACT+TGG	0.558501	7:-15631586	MsaT035539.1:CDS
TGGGAGAATTGCATGTATGT+TGG	0.565986	7:-15629335	MsaT035539.1:CDS
CAGTTCCTTTCTAACCGGCT+AGG	0.566139	7:+15627581	None:intergenic
GTGCCATCGTGATCTCCAAA+AGG	0.569929	7:+15630726	None:intergenic
AAACTTGGTGAAGGTGTCGT+TGG	0.572778	7:-15631571	MsaT035539.1:CDS
TAATAGAACTCCATAGAGAA+GGG	0.577461	7:-15630266	MsaT035539.1:CDS
GGCGGTGTACATATCAAGAC+TGG	0.577536	7:-15631550	MsaT035539.1:intron
GGTGCCAAAGAATTGATAAG+TGG	0.578697	7:-15630547	MsaT035539.1:CDS
CTTGGTGAAGGTGTCGTTGG+CGG	0.581328	7:-15631568	MsaT035539.1:CDS
CTATGCGAAATCATGCGTAA+TGG	0.591763	7:-15631041	MsaT035539.1:CDS
AAAAGTAATACCAAAACTCA+CGG	0.602607	7:+15630402	None:intergenic
GTTAGCAATCTTGGTGACCA+CGG	0.618829	7:-15629273	MsaT035539.1:CDS
ACCTCAGGATCTGGATACTG+AGG	0.620043	7:+15630990	None:intergenic
GTTTCACAGTTGAGGCAAAG+TGG	0.625290	7:-15629697	MsaT035539.1:CDS
GTGGAAGACAAACTTGGTGA+AGG	0.634028	7:-15631580	MsaT035539.1:CDS
GAGGCAACGTTTCACAGTTG+AGG	0.639648	7:-15629705	MsaT035539.1:CDS
TCCTCAGTATCCAGATCCTG+AGG	0.644016	7:-15630991	MsaT035539.1:intron
GGAAGGTCCGTAGCAAACCA+AGG	0.657930	7:+15630469	None:intergenic
GAAGTAGGTGTTTAGAGCTG+TGG	0.660282	7:-15630783	MsaT035539.1:intron
CATTACGCATGATTTCGCAT+AGG	0.660361	7:+15631042	None:intergenic
AAAACTGTACCTGAATCGCA+AGG	0.661837	7:+15629672	None:intergenic
TCTTCCATCATGTCTAATGG+AGG	0.665699	7:+15629371	None:intergenic
GATAAGTGGGATGCTTACGG+TGG	0.667341	7:-15630533	MsaT035539.1:CDS
TGCCCACCAAGTAACGAGGA+AGG	0.667349	7:+15630452	None:intergenic
TACTTGCCCACCAAGTAACG+AGG	0.667858	7:+15630448	None:intergenic
GTGCCAAAGAATTGATAAGT+GGG	0.687407	7:-15630546	MsaT035539.1:CDS
TAGAGAAGGGAGACAAGACG+AGG	0.691860	7:-15630253	MsaT035539.1:intron
CAGCCAAATAGACTTCGACA+GGG	0.711342	7:-15630425	MsaT035539.1:CDS
TAACTGGAGAACTAGACAGG+AGG	0.715546	7:-15629295	MsaT035539.1:CDS
TGAGTACAACGATTCCGCCG+TGG	0.715868	7:+15629256	None:intergenic
AGCAATCTTGGTGACCACGG+CGG	0.732737	7:-15629270	MsaT035539.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	15627591	15631638	15627591	ID=MsaG035539
Chr7	mRNA	15627591	15631638	15627591	ID=MsaT035539.1;Parent=MsaG035539
Chr7	exon	15627591	15627696	15627591	ID=MsaT035539.1.exon9;Parent=MsaT035539.1
Chr7	CDS	15627591	15627696	15627591	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15629242	15629402	15629242	ID=MsaT035539.1.exon8;Parent=MsaT035539.1
Chr7	CDS	15629242	15629402	15629242	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15629682	15629736	15629682	ID=MsaT035539.1.exon7;Parent=MsaT035539.1
Chr7	CDS	15629682	15629736	15629682	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15629919	15629929	15629919	ID=MsaT035539.1.exon6;Parent=MsaT035539.1
Chr7	CDS	15629919	15629929	15629919	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15630254	15630343	15630254	ID=MsaT035539.1.exon5;Parent=MsaT035539.1
Chr7	CDS	15630254	15630343	15630254	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15630387	15630605	15630387	ID=MsaT035539.1.exon4;Parent=MsaT035539.1
Chr7	CDS	15630387	15630605	15630387	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15630725	15630790	15630725	ID=MsaT035539.1.exon3;Parent=MsaT035539.1
Chr7	CDS	15630725	15630790	15630725	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15630992	15631158	15630992	ID=MsaT035539.1.exon2;Parent=MsaT035539.1
Chr7	CDS	15630992	15631158	15630992	ID=cds.MsaT035539.1;Parent=MsaT035539.1
Chr7	exon	15631551	15631638	15631551	ID=MsaT035539.1.exon1;Parent=MsaT035539.1
Chr7	CDS	15631551	15631638	15631551	ID=cds.MsaT035539.1;Parent=MsaT035539.1

Gene Sequence

>MsaT035539.1

ATGGATCGCACTGAAAACATTTTTGAGCGTTATCGAGTGGAAGACAAACTTGGTGAAGGTGTCGTTGGCGGTGTACATATCAAGACTGAGTTCGGTCACAGTAAACGTATAGTACATTTGGACCTTAAACCTGAGAATATACTGTTGGACGCACACAACAATGTGAAGCTAGCTGATTTTGGCCTATGCGAAATCATGCGTAATGGTTATTTTCTTCAGAAAATTCCTGGAAGTCCTCAGTATCCAGATCCTGAGAGCTGTGGTGCACTCTTATACACACTTCTATGTCAACAAGCTCCTTTTGGAGATCACGATGGCACCGATGAGCAGTACACTCTTCCTAGTTATCTATCTTCTGGTGCCAAAGAATTGATAAGTGGGATGCTTACGGTGGATCCGATAAAAATAATAACAATATCGGACATTAAAAAGCATCCTTGGTTTGCTACGGACCTTCCTCGTTACTTGGTGGGCAAGTACAGCCAAATAGACTTCGACAGGGCCGTGAGTTTTGGTATTACTTTTGTTAAGGCACAAAAGATTGATAAAGGGATTCTGAATATGTTAGTTGAAATTGGATATAATGCAGAAGAGCTAATAGAACTCCATAGAGAAGGGAGACAAGACGAGTATCCGGATGAAGTAGGACTGAGGCAACGTTTCACAGTTGAGGCAAAGTGGTTCCTTGCGATTCAGTCTGAAGCTCCTCCATTAGACATGATGGAAGAGGTCTCAGAGCTATGGGAGAATTGCATGTATGTTGGAAAAGAATTGGTCCCTATAACTGGAGAACTAGACAGGAGGTTAGCAATCTTGGTGACCACGGCGGAATCGTTGTACTCAAGTTTGAACTTCAGCAGGGATCATGAATATGCAACAATTGGTGGAATCGAAAATATTCTGAAGCAACATATAATCAAACTGAATGGATTTGAGTTCAAGTTTGTAGGCCTAGCCGGTTAG

Protein sequence

>MsaT035539.1

MDRTENIFERYRVEDKLGEGVVGGVHIKTEFGHSKRIVHLDLKPENILLDAHNNVKLADFGLCEIMRNGYFLQKIPGSPQYPDPESCGALLYTLLCQQAPFGDHDGTDEQYTLPSYLSSGAKELISGMLTVDPIKIITISDIKKHPWFATDLPRYLVGKYSQIDFDRAVSFGITFVKAQKIDKGILNMLVEIGYNAEELIELHREGRQDEYPDEVGLRQRFTVEAKWFLAIQSEAPPLDMMEEVSELWENCMYVGKELVPITGELDRRLAILVTTAESLYSSLNFSRDHEYATIGGIENILKQHIIKLNGFEFKFVGLAG*