AlfalfaGEDB | MsaG036153

M. sativa ssp. caerulea / MsaG036153

KEGG: -
GO: -
PFAM: PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036153	PNX87313.1	77.824	239	53	0	257	495	106	344	2.13e-128	390

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036153	sp\|Q9SZL8\|FRS5_ARATH	30.000	170	114	4	70	237	67	233	2.77e-15	82.4
MsaG036153	sp\|Q9SZL8\|FRS5_ARATH	25.263	190	134	4	263	447	470	656	1.95e-11	70.1

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036153	tr\|A0A2K3M978\|A0A2K3M978_TRIPR	77.824	239	53	0	257	495	106	344	1.02e-128	390

TFs/TRs:

Gene ID	Type	Classification
MsaG036153	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000033	MsaG036153	0.827674	2.452941e-54	6.646633e-52
MsaG000063	MsaG036153	0.803573	5.504018e-49	8.072855e-47
MsaG000431	MsaG036153	0.804629	3.326873e-49	5.000402e-47
MsaG000609	MsaG036153	0.831585	2.771184e-55	8.394753e-53
MsaG000683	MsaG036153	0.823219	2.750973e-53	6.592774e-51
MsaG000717	MsaG036153	0.802874	7.668941e-49	1.106788e-46
MsaG001531	MsaG036153	0.826535	4.581508e-54	1.202531e-51
MsaG002069	MsaG036153	0.812697	6.402294e-51	1.168164e-48
MsaG002926	MsaG036153	0.828521	1.536524e-54	4.263943e-52
MsaG003180	MsaG036153	0.838275	5.822302e-57	2.153635e-54
MsaG003468	MsaG036153	0.800499	2.342163e-48	3.202615e-46
MsaG003555	MsaG036153	0.802183	1.062756e-48	1.509706e-46
MsaG003648	MsaG036153	0.826898	3.754796e-54	9.955739e-52
MsaG003768	MsaG036153	0.832100	2.071147e-55	6.369310e-53
MsaG004006	MsaG036153	0.832371	1.776735e-55	5.506537e-53
MsaG004014	MsaG036153	0.800404	2.448194e-48	3.340539e-46
MsaG004047	MsaG036153	0.821444	7.075758e-53	1.616788e-50
MsaG004373	MsaG036153	0.819453	2.014796e-52	4.367896e-50
MsaG004424	MsaG036153	0.809038	3.931699e-50	6.560262e-48
MsaG004556	MsaG036153	0.847009	2.858416e-59	1.400154e-56
MsaG004798	MsaG036153	0.808558	4.974365e-50	8.204444e-48
MsaG005107	MsaG036153	0.824713	1.232706e-53	3.076529e-51
MsaG005113	MsaG036153	0.831198	3.447148e-55	1.032439e-52
MsaG005189	MsaG036153	0.814939	2.063680e-51	3.983148e-49
MsaG005210	MsaG036153	0.806490	1.360103e-49	2.135344e-47
MsaG005329	MsaG036153	0.861666	1.726482e-63	1.430199e-60
MsaG005423	MsaG036153	0.852274	9.850867e-61	5.777653e-58
MsaG005452	MsaG036153	0.831797	2.458269e-55	7.493609e-53
MsaG005510	MsaG036153	0.876575	2.607760e-68	4.023302e-65
MsaG005660	MsaG036153	0.825570	7.749109e-54	1.980093e-51
MsaG006025	MsaG036153	0.858950	1.134064e-62	8.473054e-60
MsaG006020	MsaG036153	0.829051	1.145582e-54	3.226587e-52
MsaG006262	MsaG036153	0.817395	5.868008e-52	1.205855e-49
MsaG006452	MsaG036153	0.802729	8.214083e-49	1.181517e-46
MsaG006529	MsaG036153	0.820663	1.068055e-52	2.390525e-50
MsaG007040	MsaG036153	0.862749	8.057983e-64	6.963824e-61
MsaG007353	MsaG036153	0.811356	1.250647e-50	2.207679e-48
MsaG007570	MsaG036153	0.838682	4.579023e-57	1.715339e-54
MsaG007614	MsaG036153	0.834759	4.532373e-56	1.507329e-53
MsaG007877	MsaG036153	0.823682	2.146444e-53	5.209302e-51
MsaG007880	MsaG036153	0.815062	1.938759e-51	3.753651e-49
MsaG007722	MsaG036153	0.802386	9.656423e-49	1.378190e-46
MsaG007828	MsaG036153	0.862911	7.184895e-64	6.248941e-61
MsaG007834	MsaG036153	0.824719	1.228102e-53	3.065606e-51
MsaG007914	MsaG036153	0.864695	2.016987e-64	1.882571e-61
MsaG008198	MsaG036153	0.870971	1.989118e-66	2.401845e-63
MsaG008218	MsaG036153	0.855174	1.456382e-61	9.467713e-59
MsaG008356	MsaG036153	0.818432	3.429733e-52	7.238899e-50
MsaG008434	MsaG036153	0.800692	2.140002e-48	2.939098e-46
MsaG008634	MsaG036153	0.815482	1.565657e-51	3.063543e-49
MsaG009389	MsaG036153	0.820083	1.448971e-52	3.193881e-50
MsaG009409	MsaG036153	0.806437	1.394949e-49	2.187436e-47
MsaG009657	MsaG036153	0.859025	1.076917e-62	8.069105e-60
MsaG010050	MsaG036153	0.814338	2.799310e-51	5.321927e-49
MsaG010066	MsaG036153	0.800144	2.763827e-48	3.748976e-46
MsaG010104	MsaG036153	0.822687	3.654745e-53	8.633627e-51
MsaG010394	MsaG036153	0.885063	2.418601e-71	5.556729e-68
MsaG010902	MsaG036153	0.809932	2.531978e-50	4.316749e-48
MsaG010942	MsaG036153	0.800222	2.665240e-48	3.621597e-46
MsaG011080	MsaG036153	0.859835	6.169546e-63	4.766701e-60
MsaG011774	MsaG036153	0.806677	1.242014e-49	1.958583e-47
MsaG012263	MsaG036153	0.881790	3.806664e-70	7.471993e-67
MsaG012489	MsaG036153	0.803386	6.016778e-49	8.786917e-47
MsaG012568	MsaG036153	0.815188	1.817847e-51	3.530870e-49
MsaG013644	MsaG036153	0.830193	6.060416e-55	1.763646e-52
MsaG013845	MsaG036153	0.819330	2.148835e-52	4.643511e-50
MsaG014727	MsaG036153	0.827389	2.868949e-54	7.712265e-52
MsaG015018	MsaG036153	0.809550	3.056901e-50	5.163994e-48
MsaG015705	MsaG036153	0.858499	1.544241e-62	1.134509e-59
MsaG016471	MsaG036153	0.817216	6.434995e-52	1.316329e-49
MsaG017059	MsaG036153	0.801490	1.472974e-48	2.059679e-46
MsaG017068	MsaG036153	0.807801	7.196978e-50	1.165632e-47
MsaG017286	MsaG036153	0.857372	3.324299e-62	2.341832e-59
MsaG017324	MsaG036153	0.845070	9.573464e-59	4.397257e-56
MsaG017546	MsaG036153	0.860073	5.232862e-63	4.080021e-60
MsaG017620	MsaG036153	0.806588	1.296927e-49	2.040904e-47
MsaG017719	MsaG036153	0.804628	3.328180e-49	5.002283e-47
MsaG017778	MsaG036153	0.820600	1.104373e-52	2.467698e-50
MsaG017873	MsaG036153	0.801729	1.316486e-48	1.850917e-46
MsaG018040	MsaG036153	0.803309	6.240587e-49	9.097361e-47
MsaG018202	MsaG036153	0.808277	5.707018e-50	9.349503e-48
MsaG018257	MsaG036153	0.833424	9.750449e-56	3.116724e-53
MsaG018447	MsaG036153	0.849413	6.239320e-60	3.314950e-57
MsaG018438	MsaG036153	0.816008	1.196572e-51	2.372866e-49
MsaG018489	MsaG036153	0.862919	7.146046e-64	6.217077e-61
MsaG018638	MsaG036153	0.817805	4.746411e-52	9.857255e-50
MsaG018749	MsaG036153	0.804474	3.583427e-49	5.366682e-47
MsaG018770	MsaG036153	0.857766	2.545339e-62	1.819552e-59
MsaG018777	MsaG036153	0.865594	1.055905e-64	1.021415e-61
MsaG018786	MsaG036153	0.827950	2.106346e-54	5.752046e-52
MsaG018793	MsaG036153	0.813300	4.729087e-51	8.759186e-49
MsaG018913	MsaG036153	0.802255	1.027499e-48	1.462002e-46
MsaG019108	MsaG036153	0.819641	1.826526e-52	3.978964e-50
MsaG019193	MsaG036153	0.867996	1.829808e-65	1.951461e-62
MsaG019267	MsaG036153	0.852840	6.805518e-61	4.071341e-58
MsaG019356	MsaG036153	0.807696	7.576680e-50	1.224023e-47
MsaG019452	MsaG036153	0.813958	3.393816e-51	6.390942e-49
MsaG019526	MsaG036153	0.820399	1.227720e-52	2.728886e-50
MsaG019564	MsaG036153	0.826868	3.818371e-54	1.011581e-51
MsaG019628	MsaG036153	0.829572	8.572472e-55	2.450753e-52
MsaG019809	MsaG036153	0.800817	2.019102e-48	2.780776e-46
MsaG019911	MsaG036153	0.836741	1.433838e-56	5.060504e-54
MsaG019913	MsaG036153	0.851067	2.157044e-60	1.212874e-57
MsaG019935	MsaG036153	0.818498	3.315030e-52	7.008685e-50
MsaG019985	MsaG036153	0.818945	2.627086e-52	5.619658e-50
MsaG019977	MsaG036153	0.811868	9.692885e-51	1.732648e-48
MsaG020078	MsaG036153	0.807292	9.217255e-50	1.474742e-47
MsaG020233	MsaG036153	0.810370	2.039363e-50	3.514296e-48
MsaG020288	MsaG036153	0.805769	1.925360e-49	2.971675e-47
MsaG020334	MsaG036153	0.805281	2.434365e-49	3.714706e-47
MsaG020371	MsaG036153	0.826452	4.791587e-54	1.254901e-51
MsaG020415	MsaG036153	0.844341	1.501986e-58	6.734509e-56
MsaG020420	MsaG036153	0.840938	1.191542e-57	4.790516e-55
MsaG020467	MsaG036153	0.845406	7.773884e-59	3.610179e-56
MsaG021200	MsaG036153	0.850980	2.281581e-60	1.279057e-57
MsaG021488	MsaG036153	0.803509	5.673687e-49	8.309424e-47
MsaG021668	MsaG036153	0.849801	4.870688e-60	2.621832e-57
MsaG022100	MsaG036153	0.827357	2.918971e-54	7.839631e-52
MsaG022345	MsaG036153	0.841118	1.069144e-57	4.323107e-55
MsaG022515	MsaG036153	0.878003	8.353675e-69	1.375017e-65
MsaG022533	MsaG036153	0.806515	1.343461e-49	2.110492e-47
MsaG022547	MsaG036153	0.815401	1.631238e-51	3.185510e-49
MsaG023275	MsaG036153	0.832268	1.883705e-55	5.820640e-53
MsaG023343	MsaG036153	0.854257	2.678008e-61	1.684969e-58
MsaG023642	MsaG036153	0.800818	2.018303e-48	2.779700e-46
MsaG023938	MsaG036153	0.813129	5.154363e-51	9.506416e-49
MsaG024010	MsaG036153	0.828738	1.362811e-54	3.804591e-52
MsaG024037	MsaG036153	0.825941	6.331043e-54	1.634675e-51
MsaG024114	MsaG036153	0.861767	1.608610e-63	1.337855e-60
MsaG024119	MsaG036153	0.823538	2.319267e-53	5.606489e-51
MsaG024304	MsaG036153	0.828809	1.309949e-54	3.664442e-52
MsaG024382	MsaG036153	0.800649	2.183895e-48	2.996422e-46
MsaG025289	MsaG036153	0.815275	1.739818e-51	3.386691e-49
MsaG026022	MsaG036153	0.842357	5.053578e-58	2.125714e-55
MsaG026515	MsaG036153	0.812337	7.666973e-51	1.386449e-48
MsaG026738	MsaG036153	0.824812	1.167972e-53	2.922985e-51
MsaG026849	MsaG036153	0.814005	3.313708e-51	6.247348e-49
MsaG026830	MsaG036153	0.802371	9.724256e-49	1.387414e-46
MsaG026985	MsaG036153	0.842132	5.792363e-58	2.418786e-55
MsaG026987	MsaG036153	0.821403	7.230048e-53	1.650261e-50
MsaG027291	MsaG036153	0.825009	1.050145e-53	2.642316e-51
MsaG027364	MsaG036153	0.843810	2.081991e-58	9.174865e-56
MsaG027776	MsaG036153	0.814036	3.262748e-51	6.155899e-49
MsaG027750	MsaG036153	0.806300	1.490190e-49	2.329160e-47
MsaG028026	MsaG036153	0.817721	4.957942e-52	1.027385e-49
MsaG028109	MsaG036153	0.871295	1.555979e-66	1.904958e-63
MsaG028163	MsaG036153	0.832698	1.475097e-55	4.615456e-53
MsaG028334	MsaG036153	0.808284	5.685690e-50	9.316240e-48
MsaG028442	MsaG036153	0.801543	1.436321e-48	2.010890e-46
MsaG028979	MsaG036153	0.823554	2.299519e-53	5.561127e-51
MsaG028911	MsaG036153	0.804474	3.583427e-49	5.366682e-47
MsaG029017	MsaG036153	0.834280	5.969316e-56	1.956900e-53
MsaG029188	MsaG036153	0.816365	9.967752e-52	1.994764e-49
MsaG029204	MsaG036153	0.844856	1.093257e-58	4.986126e-56
MsaG029349	MsaG036153	0.809725	2.803934e-50	4.756613e-48
MsaG029413	MsaG036153	0.856961	4.390905e-62	3.046385e-59
MsaG029473	MsaG036153	0.819900	1.594618e-52	3.497800e-50
MsaG029802	MsaG036153	0.846761	3.340780e-59	1.622955e-56
MsaG029889	MsaG036153	0.800015	2.935418e-48	3.970316e-46
MsaG030045	MsaG036153	0.811468	1.183045e-50	2.094092e-48
MsaG030198	MsaG036153	0.818666	3.037221e-52	6.449593e-50
MsaG030546	MsaG036153	0.817039	7.049403e-52	1.435420e-49
MsaG031043	MsaG036153	0.801709	1.328473e-48	1.866912e-46
MsaG031129	MsaG036153	0.817671	5.087289e-52	1.052832e-49
MsaG031364	MsaG036153	0.828617	1.457588e-54	4.055547e-52
MsaG031427	MsaG036153	0.808200	5.924698e-50	9.688163e-48
MsaG032115	MsaG036153	0.806947	1.089767e-49	1.729420e-47
MsaG032272	MsaG036153	0.826920	3.710398e-54	9.844166e-52
MsaG032221	MsaG036153	0.839499	2.817971e-57	1.082888e-54
MsaG033301	MsaG036153	0.803825	4.883531e-49	7.204568e-47
MsaG033593	MsaG036153	0.813250	4.849316e-51	8.970913e-49
MsaG034337	MsaG036153	0.840717	1.360774e-57	5.432900e-55
MsaG034977	MsaG036153	0.866776	4.476095e-65	4.542667e-62
MsaG034946	MsaG036153	0.818725	2.945438e-52	6.264224e-50
MsaG035511	MsaG036153	0.821196	8.064139e-53	1.830666e-50
MsaG035682	MsaG036153	0.847452	2.164371e-59	1.076096e-56
MsaG036153	MsaG039489	0.810004	2.444168e-50	4.174327e-48
MsaG036153	MsaG040385	0.835115	3.689462e-56	1.240082e-53
MsaG036153	MsaG040425	0.824788	1.183522e-53	2.959901e-51
MsaG036153	MsaG041116	0.806993	1.065984e-49	1.693497e-47
MsaG036153	MsaG041271	0.805011	2.770337e-49	4.201160e-47
MsaG036153	MsaG041336	0.855459	1.204323e-61	7.910719e-59
MsaG036153	MsaG041800	0.805824	1.875232e-49	2.898082e-47
MsaG036153	MsaG041819	0.823440	2.443996e-53	5.892247e-51
MsaG036153	MsaG041949	0.822431	4.189587e-53	9.828908e-51
MsaG036153	MsaG042054	0.829972	6.858286e-55	1.983275e-52
MsaG036153	MsaG042103	0.853130	5.627288e-61	3.401276e-58
MsaG036153	MsaG042126	0.812024	8.967316e-51	1.609072e-48
MsaG036153	MsaG042579	0.856083	7.927597e-62	5.326807e-59
MsaG036153	MsaG042717	0.818532	3.256154e-52	6.890455e-50
MsaG036153	MsaG043788	0.849299	6.713791e-60	3.552770e-57
MsaG036153	MsaG044278	0.852582	8.054955e-61	4.775476e-58
MsaG036153	MsaG044453	0.806481	1.365974e-49	2.144169e-47
MsaG036153	MsaG044584	0.905190	1.314647e-79	9.164652e-76
MsaG036153	MsaG044889	0.801048	1.812321e-48	2.508915e-46
MsaG036153	MsaG045021	0.813490	4.296830e-51	7.996803e-49
MsaG036153	MsaG045046	0.800566	2.269973e-48	3.108695e-46
MsaG036153	MsaG045238	0.840824	1.275828e-57	5.110983e-55
MsaG036153	MsaG045371	0.831563	2.805739e-55	8.494008e-53
MsaG036153	MsaG045548	0.829734	7.830431e-55	2.249012e-52
MsaG036153	MsaG045549	0.809764	2.751419e-50	4.671944e-48
MsaG036153	MsaG045767	0.807584	7.998312e-50	1.288649e-47
MsaG036153	MsaG045769	0.841495	8.518422e-58	3.485769e-55
MsaG036153	MsaG046051	0.819386	2.087286e-52	4.516994e-50
MsaG036153	MsaG046488	0.808159	6.044127e-50	9.873688e-48
MsaG036153	MsaG046498	0.852384	9.169529e-61	5.398940e-58
MsaG036153	MsaG046507	0.854171	2.834030e-61	1.777561e-58
MsaG036153	MsaG046589	0.849687	5.237363e-60	2.808612e-57
MsaG036153	MsaG046695	0.800141	2.768778e-48	3.755369e-46
MsaG036153	MsaG046816	0.839524	2.777533e-57	1.068134e-54
MsaG036153	MsaG047011	0.838758	4.375796e-57	1.643161e-54
MsaG036153	MsaG047091	0.851308	1.844822e-60	1.046027e-57
MsaG036153	MsaG047092	0.810808	1.641708e-50	2.859401e-48
MsaG036153	MsaG001564	0.837443	9.507951e-57	3.428202e-54
MsaG036153	MsaG002242	0.854894	1.754510e-61	1.129151e-58
MsaG036153	MsaG001950	0.818135	4.001732e-52	8.381663e-50
MsaG036153	MsaG003734	0.867916	1.939735e-65	2.061970e-62
MsaG036153	MsaG003742	0.836981	1.245947e-56	4.429301e-54
MsaG036153	MsaG007590	0.833181	1.120065e-55	3.554869e-53
MsaG036153	MsaG009512	0.846607	3.678357e-59	1.777590e-56
MsaG036153	MsaG013712	0.807674	7.657723e-50	1.236439e-47
MsaG036153	MsaG013252	0.829980	6.828979e-55	1.975210e-52
MsaG036153	MsaG013873	0.814506	2.571718e-51	4.909729e-49
MsaG036153	MsaG011676	0.847504	2.094735e-59	1.043253e-56
MsaG036153	MsaG012091	0.806844	1.145593e-49	1.813584e-47
MsaG036153	MsaG018864	0.809320	3.423072e-50	5.750120e-48
MsaG036153	MsaG023445	0.800891	1.950530e-48	2.690750e-46
MsaG036153	MsaG018678	0.838506	5.080147e-57	1.892673e-54
MsaG036153	MsaG023179	0.823995	1.814990e-53	4.442113e-51
MsaG036153	MsaG020399	0.813652	3.959386e-51	7.398837e-49
MsaG036153	MsaG018912	0.813423	4.443398e-51	8.256026e-49
MsaG036153	MsaG018378	0.879553	2.390061e-69	4.226337e-66
MsaG036153	MsaG024084	0.831493	2.918856e-55	8.818185e-53
MsaG036153	MsaG017935	0.850095	4.034450e-60	2.193351e-57
MsaG036153	MsaG024179	0.801811	1.266442e-48	1.783909e-46
MsaG036153	MsaG026285	0.811428	1.206596e-50	2.133668e-48
MsaG036153	MsaG029390	0.809485	3.156907e-50	5.324694e-48
MsaG036153	MsaG028903	0.806187	1.573751e-49	2.453164e-47
MsaG036153	MsaG027575	0.823236	2.726638e-53	6.537492e-51
MsaG036153	MsaG026407	0.815645	1.440548e-51	2.830597e-49
MsaG036153	MsaG031280	0.810253	2.161623e-50	3.714255e-48
MsaG036153	MsaG030007	0.863288	5.501520e-64	4.856034e-61
MsaG036153	MsaG032092	0.821087	8.542338e-53	1.933595e-50
MsaG036153	MsaG034262	0.860043	5.340300e-63	4.158931e-60
MsaG036153	MsaG034730	0.817351	6.003295e-52	1.232234e-49
MsaG036153	MsaG036873	0.800155	2.750704e-48	3.732037e-46
MsaG036153	MsaG037384	0.807035	1.044442e-49	1.660923e-47
MsaG036153	MsaG037161	0.832798	1.393230e-55	4.372156e-53
MsaG036153	MsaG037484	0.811946	9.323129e-51	1.669780e-48
MsaG036153	MsaG037726	0.824530	1.360452e-53	3.378579e-51
MsaG036153	MsaG037051	0.854516	2.255298e-61	1.432085e-58
MsaG036153	MsaG035294	0.829922	7.051832e-55	2.036315e-52
MsaG036153	MsaG036984	0.802193	1.057961e-48	1.503230e-46
MsaG036153	MsaG044531	0.804242	4.001686e-49	5.961218e-47
MsaG036153	MsaG042234	0.809102	3.809873e-50	6.366824e-48
MsaG036153	MsaG042291	0.847824	1.711263e-59	8.615847e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036153	MtrunA17_Chr2g0308841	53.216	171	80	0	257	427	56	226	9.34e-64	208
MsaG036153	MtrunA17_Chr1g0203051	39.524	210	122	2	28	237	34	238	1.73e-42	160
MsaG036153	MtrunA17_Chr1g0203051	34.595	185	118	1	234	415	437	621	5.49e-28	117
MsaG036153	MtrunA17_Chr1g0171741	36.041	197	124	2	11	206	65	260	3.30e-36	135
MsaG036153	MtrunA17_Chr8g0389811	42.188	128	74	0	55	182	61	188	2.58e-32	122
MsaG036153	MtrunA17_Chr2g0331371	38.608	158	95	1	27	182	2	159	5.95e-26	105
MsaG036153	MtrunA17_Chr2g0287651	33.333	165	110	0	73	237	70	234	1.04e-25	111
MsaG036153	MtrunA17_Chr2g0287651	35.260	173	112	0	256	428	460	632	1.33e-24	107
MsaG036153	MtrunA17_Chr6g0473421	38.760	129	77	1	27	153	2	130	8.11e-24	97.4
MsaG036153	MtrunA17_Chr5g0448761	30.061	163	112	2	77	237	59	221	2.85e-17	85.1
MsaG036153	MtrunA17_Chr1g0202341	27.919	197	129	4	50	237	15	207	1.40e-16	82.8
MsaG036153	MtrunA17_Chr1g0172931	36.634	101	64	0	60	160	58	158	3.45e-16	75.9
MsaG036153	MtrunA17_Chr1g0198761	35.252	139	78	6	90	218	59	195	1.11e-14	77.0
MsaG036153	MtrunA17_Chr2g0276841	31.429	140	89	4	84	218	76	213	9.31e-14	73.9
MsaG036153	MtrunA17_Chr2g0294841	32.414	145	86	5	83	218	50	191	1.56e-13	73.2
MsaG036153	MtrunA17_Chr3g0118611	23.889	180	132	3	276	453	350	526	1.29e-11	67.0
MsaG036153	MtrunA17_Chr5g0431001	25.688	218	129	5	54	250	25	230	2.07e-11	66.2
MsaG036153	MtrunA17_Chr6g0458391	23.741	278	170	11	6	250	10	278	2.67e-11	66.2
MsaG036153	MtrunA17_Chr2g0324011	24.242	198	140	3	245	438	391	582	3.64e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036153	AT4G38180.1	30.000	170	114	4	70	237	67	233	2.81e-16	82.4
MsaG036153	AT4G38180.1	25.263	190	134	4	263	447	470	656	1.98e-12	70.1
MsaG036153	AT1G10240.2	28.421	190	118	7	35	218	14	191	8.70e-16	80.9
MsaG036153	AT1G10240.1	28.421	190	118	7	35	218	14	191	8.70e-16	80.9
MsaG036153	AT5G28530.4	32.061	131	86	2	90	218	67	196	1.51e-14	76.6
MsaG036153	AT5G28530.5	32.061	131	86	2	90	218	67	196	1.54e-14	76.6
MsaG036153	AT5G28530.3	32.061	131	86	2	90	218	67	196	1.56e-14	76.6
MsaG036153	AT5G28530.2	32.061	131	86	2	90	218	67	196	1.56e-14	76.6
MsaG036153	AT5G28530.1	32.061	131	86	2	90	218	67	196	1.65e-14	76.6
MsaG036153	AT4G38170.1	25.424	177	129	2	258	434	230	403	2.29e-11	66.6

Find 95 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTGGTTTGCAAAGATTAA+TGG	0.202245	7:-28116753	MsaT036153.1:CDS
GAGTATCTAATAATGATATT+AGG	0.223767	7:+28115401	None:intergenic
CTTACTAAGATTCACCAAAT+TGG	0.273526	7:+28115087	None:intergenic
AGTTTCTGATTTGGCATATC+AGG	0.280882	7:-28115062	MsaT036153.1:CDS
TGTCTTAGAATGGAATCTAT+TGG	0.286177	7:-28115274	MsaT036153.1:CDS
GCTGATCACCAATCTCAATA+TGG	0.303020	7:-28115529	MsaT036153.1:CDS
GGTTGCGAGACACGCCAATT+TGG	0.319259	7:-28115101	MsaT036153.1:CDS
CTATGGCAATGCTGGAATAA+TGG	0.328742	7:-28116418	MsaT036153.1:CDS
GTCTTAGAATGGAATCTATT+GGG	0.342081	7:-28115273	MsaT036153.1:CDS
TGTGGGCAACATCTCATGTT+AGG	0.342490	7:-28115688	MsaT036153.1:CDS
CCACACCTGGTTTCGTGTCT+TGG	0.351926	7:+28116603	None:intergenic
ATCAAGATGGTTCACACTAC+TGG	0.359918	7:-28115135	MsaT036153.1:CDS
AGTATCTAATAATGATATTA+GGG	0.360092	7:+28115402	None:intergenic
TGTGTAATCTAGAAGGATTT+AGG	0.362208	7:-28116665	MsaT036153.1:CDS
TAGTAAGGAAGTTTCTGATT+TGG	0.367852	7:-28115071	MsaT036153.1:CDS
ACACTACTGGGATTCACATT+TGG	0.373928	7:-28115122	MsaT036153.1:CDS
TGACACCGCTGGTGACGATT+TGG	0.375975	7:-28116946	MsaT036153.1:CDS
CTTTAATAACGTGACCTTTG+CGG	0.378527	7:+28116721	None:intergenic
TAAATGCACTTGTCTTAGAA+TGG	0.394455	7:-28115284	MsaT036153.1:CDS
AGAGAAGCATTGCGGGTTGT+TGG	0.401759	7:-28116487	MsaT036153.1:CDS
ATCGATAACTATGGCAATGC+TGG	0.402549	7:-28116426	MsaT036153.1:CDS
GTGCATATTGATATAAATTC+AGG	0.402681	7:-28116561	MsaT036153.1:CDS
AAATATCGAGACGAGGGATA+TGG	0.410059	7:-28115343	MsaT036153.1:CDS
TGTTAATAGAGAAGCATTGC+GGG	0.410334	7:-28116494	MsaT036153.1:CDS
AAGATTCAAATCGATAACTA+TGG	0.410922	7:-28116435	MsaT036153.1:CDS
TGATTCAGCACAAGATACTT+AGG	0.418044	7:+28115196	None:intergenic
CACAAAAGAAATATTCATCT+TGG	0.422432	7:-28115449	MsaT036153.1:CDS
GCTTCTCTATTAACATATCA+TGG	0.424924	7:+28116502	None:intergenic
TCGAGGTTTAGCCATGAAAA+TGG	0.425862	7:-28114980	MsaT036153.1:CDS
AGTATCTTGTGCTGAATCAT+TGG	0.438285	7:-28115192	MsaT036153.1:CDS
TCAATTAAGTAAGATTCGTC+TGG	0.440807	7:+28116876	None:intergenic
TCAATGAGATGTTTGAGAAA+AGG	0.443065	7:-28115715	MsaT036153.1:CDS
CAGTGTTGCAGACCAGTCTA+AGG	0.459285	7:-28115501	MsaT036153.1:CDS
TTGATATAAATTCAGGTCGT+TGG	0.459962	7:-28116554	MsaT036153.1:CDS
GTGGGCAACATCTCATGTTA+GGG	0.462616	7:-28115687	MsaT036153.1:CDS
TTCATCTTTGAATGTACAAA+CGG	0.464037	7:+28115616	None:intergenic
GCTGGTGGGTATGATAAGGT+TGG	0.466209	7:-28116363	MsaT036153.1:CDS
TTGAATATAGACAACATTGA+TGG	0.468403	7:-28117029	MsaT036153.1:CDS
CAATTTGGTGAATCTTAGTA+AGG	0.472298	7:-28115086	MsaT036153.1:CDS
CTGATCACCAATCTCAATAT+GGG	0.482888	7:-28115528	MsaT036153.1:CDS
CACGTTATTAAAGATAAGAA+TGG	0.499881	7:-28116711	MsaT036153.1:CDS
GTCAATGTAACTCATGATGA+TGG	0.504196	7:-28116999	MsaT036153.1:CDS
CTGGTGGGTATGATAAGGTT+GGG	0.505137	7:-28116362	MsaT036153.1:CDS
GTCTACTCAGTTCATCAGTA+AGG	0.506109	7:+28115008	None:intergenic
CACGAAACCAGGTGTGGTTG+TGG	0.506910	7:-28116597	MsaT036153.1:CDS
TTTCACGCCACAACCACACC+TGG	0.510809	7:+28116590	None:intergenic
GGTGCATTTGCAAATGCTGC+TGG	0.519175	7:-28116381	MsaT036153.1:CDS
CCTCTCGAGCGACCTTAGAC+TGG	0.519542	7:+28115489	None:intergenic
TGTTTGAGAAAAGGAATATG+TGG	0.523368	7:-28115706	MsaT036153.1:CDS
TGTAGACAATATTGTGAAGA+TGG	0.524311	7:-28116850	MsaT036153.1:CDS
GATTCAGCACAAGATACTTA+GGG	0.524884	7:+28115197	None:intergenic
CTGCCTGCCCATATTGAGAT+TGG	0.525441	7:+28115521	None:intergenic
GCGGGTTGTTGGCTGCTCAC+AGG	0.526567	7:-28116476	MsaT036153.1:CDS
TCAAGATGGTTCACACTACT+GGG	0.549463	7:-28115134	MsaT036153.1:CDS
TGTCAAGGAATAAATATCAA+AGG	0.551099	7:+28115366	None:intergenic
ATAATGGTTACTCAAATGAT+TGG	0.552942	7:-28116402	MsaT036153.1:CDS
AACCATCTTGATAGTTTCCA+CGG	0.556190	7:+28115146	None:intergenic
GAAAATATTCTACACACTGG+TGG	0.557474	7:+28115569	None:intergenic
CATTTAAATTCATCGTTGAG+TGG	0.559914	7:+28115301	None:intergenic
TTGGCCTGGAAGAAAACAGT+TGG	0.561624	7:-28115739	MsaT036153.1:intron
TCACCAATCTCAATATGGGC+AGG	0.573156	7:-28115524	MsaT036153.1:CDS
GTTTGAGAAAAGGAATATGT+GGG	0.574502	7:-28115705	MsaT036153.1:CDS
ATCCGTGGAAACTATCAAGA+TGG	0.579257	7:-28115148	MsaT036153.1:CDS
GCATTTGCAAATGCTGCTGG+TGG	0.585164	7:-28116378	MsaT036153.1:CDS
TCAATGTAACTCATGATGAT+GGG	0.586905	7:-28116998	MsaT036153.1:CDS
CCAGTCTAAGGTCGCTCGAG+AGG	0.592281	7:-28115489	MsaT036153.1:CDS
TGCTGCTGGTGGGTATGATA+AGG	0.594589	7:-28116367	MsaT036153.1:CDS
GATCCCTTGTGAGCATATTG+TGG	0.601137	7:-28115251	MsaT036153.1:CDS
GTGGTCCAAGACACGAAACC+AGG	0.602270	7:-28116608	MsaT036153.1:CDS
GCAAACGACAATGACACCGC+TGG	0.611845	7:-28116957	MsaT036153.1:CDS
CATTTGCAAATGCTGCTGGT+GGG	0.618076	7:-28116377	MsaT036153.1:CDS
TCATTGGTCACAATTTGCAA+AGG	0.618936	7:-28115176	MsaT036153.1:CDS
CTTGACAAAATATCGAGACG+AGG	0.625437	7:-28115350	MsaT036153.1:CDS
TGAAGCATTTCATAGCCACA+TGG	0.625788	7:-28115641	MsaT036153.1:CDS
ATCGAAAATATTCTACACAC+TGG	0.626984	7:+28115566	None:intergenic
ACCGCCACAATATGCTCACA+AGG	0.627656	7:+28115247	None:intergenic
TTCATCCAAATCGTCACCAG+CGG	0.634435	7:+28116941	None:intergenic
ATAGACAACATTGATGGTGA+AGG	0.635617	7:-28117023	MsaT036153.1:CDS
ATGTTAATAGAGAAGCATTG+CGG	0.638277	7:-28116495	MsaT036153.1:CDS
AACTGAGTAGACTGAAATCG+AGG	0.648645	7:-28114997	MsaT036153.1:CDS
AAGGATTTAGGTATGACAGA+GGG	0.653871	7:-28116653	MsaT036153.1:CDS
AATAACGTGACCTTTGCGGA+CGG	0.654807	7:+28116725	None:intergenic
TTGACAAAATATCGAGACGA+GGG	0.659491	7:-28115349	MsaT036153.1:CDS
CCCTTGTGAGCATATTGTGG+CGG	0.661298	7:-28115248	MsaT036153.1:CDS
CAATGTAACTCATGATGATG+GGG	0.663298	7:-28116997	MsaT036153.1:CDS
TTTGCAAAGGAGTCTATCCG+TGG	0.667803	7:-28115163	MsaT036153.1:CDS
TGGGCAACATCTCATGTTAG+GGG	0.677310	7:-28115686	MsaT036153.1:CDS
GGGCAACATCTCATGTTAGG+GGG	0.677920	7:-28115685	MsaT036153.1:CDS
ACATCAGAGAAACGCAAGCG+TGG	0.681208	7:-28116627	MsaT036153.1:CDS
GAAGGATTTAGGTATGACAG+AGG	0.687850	7:-28116654	MsaT036153.1:CDS
CCAAGACACGAAACCAGGTG+TGG	0.688722	7:-28116603	MsaT036153.1:CDS
GAAGCATTTCATAGCCACAT+GGG	0.694477	7:-28115640	MsaT036153.1:CDS
GGGGAATACGAACTACATCA+GGG	0.695608	7:-28115666	MsaT036153.1:CDS
AATGTACAAACGGACCCATG+TGG	0.708271	7:+28115626	None:intergenic
CCGCCACAATATGCTCACAA+GGG	0.726641	7:+28115248	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	28114973	28117057	28114973	ID=MsaG036153
Chr7	mRNA	28114973	28117057	28114973	ID=MsaT036153.1;Parent=MsaG036153
Chr7	exon	28114973	28115749	28114973	ID=MsaT036153.1.exon2;Parent=MsaT036153.1
Chr7	CDS	28114973	28115749	28114973	ID=cds.MsaT036153.1;Parent=MsaT036153.1
Chr7	exon	28116347	28117057	28116347	ID=MsaT036153.1.exon1;Parent=MsaT036153.1
Chr7	CDS	28116347	28117057	28116347	ID=cds.MsaT036153.1;Parent=MsaT036153.1

Gene Sequence

>MsaT036153.1

ATGGATTTGAATATAGACAACATTGATGGTGAAGGTGTCAATGTAACTCATGATGATGGGGAGTGTTCTGATAGCGATGCAAACGACAATGACACCGCTGGTGACGATTTGGATGAAAATTCAAACAGCTTCAATGAATCAACACACTCAGATCAAAATCCAGACGAATCTTACTTAATTGATGATGTAGACAATATTGTGAAGATGGATATGTTTAACTTGAAGAATGAAGATGTTTCGAAGTTGCAATTTCGTAATCTTGAAGTTGCGTACTCATTTTTTTGTTGGTTTGCAAAGATTAATGGTTTTGCCGTCCGCAAAGGTCACGTTATTAAAGATAAGAATGGAGATGTTGTTCAACAAACTTTTGTGTGTAATCTAGAAGGATTTAGGTATGACAGAGGGTTAACATCAGAGAAACGCAAGCGTGGTCCAAGACACGAAACCAGGTGTGGTTGTGGCGTGAAATTTCGAGTGCATATTGATATAAATTCAGGTCGTTGGTACATCACACTTTTCAGTTATGAGCACAACCATGATATGTTAATAGAGAAGCATTGCGGGTTGTTGGCTGCTCACAGGAAACTGACAAAGTCAGATAAGATTCAAATCGATAACTATGGCAATGCTGGAATAATGGTTACTCAAATGATTGGTGCATTTGCAAATGCTGCTGGTGGGTATGATAAGGTTGGGTTATTGAAGAAAGATAAAACAGTTGGATCAATGAGATGTTTGAGAAAAGGAATATGTGGGCAACATCTCATGTTAGGGGGAATACGAACTACATCAGGGTGTGAAGCATTTCATAGCCACATGGGTCCGTTTGTACATTCAAAGATGAATATGACTGATTTTGTAAAGCAGTTCCACCAGTGTGTAGAATATTTTCGATTTAGAGAGGTTCAAGCTGATCACCAATCTCAATATGGGCAGGCAGTGTTGCAGACCAGTCTAAGGTCGCTCGAGAGGTCAGCTTCAAAACAATTCACAAAAGAAATATTCATCTTGGTACATTTTGTCCTTAAAAAGGTTTCCCTAATATCATTATTAGATACTCAACATATGTCATCCTTTGATATTTATTCCTTGACAAAATATCGAGACGAGGGATATGGTTTTCGAGTTTCGCATTGTCCACTCAACGATGAATTTAAATGCACTTGTCTTAGAATGGAATCTATTGGGATCCCTTGTGAGCATATTGTGGCGGTGCTAGTATATCTTGATTTTGCTGATTTCCCTAAGTATCTTGTGCTGAATCATTGGTCACAATTTGCAAAGGAGTCTATCCGTGGAAACTATCAAGATGGTTCACACTACTGGGATTCACATTTGGTTGCGAGACACGCCAATTTGGTGAATCTTAGTAAGGAAGTTTCTGATTTGGCATATCAGGATGTTGATGATTATAAAAATTATTTAAATTACCTTACTGATGAACTGAGTAGACTGAAATCGAGGTTTAGCCATGAAAATGGTCCATAG

Protein sequence

>MsaT036153.1

MDLNIDNIDGEGVNVTHDDGECSDSDANDNDTAGDDLDENSNSFNESTHSDQNPDESYLIDDVDNIVKMDMFNLKNEDVSKLQFRNLEVAYSFFCWFAKINGFAVRKGHVIKDKNGDVVQQTFVCNLEGFRYDRGLTSEKRKRGPRHETRCGCGVKFRVHIDINSGRWYITLFSYEHNHDMLIEKHCGLLAAHRKLTKSDKIQIDNYGNAGIMVTQMIGAFANAAGGYDKVGLLKKDKTVGSMRCLRKGICGQHLMLGGIRTTSGCEAFHSHMGPFVHSKMNMTDFVKQFHQCVEYFRFREVQADHQSQYGQAVLQTSLRSLERSASKQFTKEIFILVHFVLKKVSLISLLDTQHMSSFDIYSLTKYRDEGYGFRVSHCPLNDEFKCTCLRMESIGIPCEHIVAVLVYLDFADFPKYLVLNHWSQFAKESIRGNYQDGSHYWDSHLVARHANLVNLSKEVSDLAYQDVDDYKNYLNYLTDELSRLKSRFSHENGP*