AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG036529


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036529 MtrunA17_Chr7g0227331 97.386 612 12 2 1 610 1 610 0.0 1225
MsaG036529 MtrunA17_Chr6g0449401 63.877 681 153 13 1 610 13 671 0.0 814
MsaG036529 MtrunA17_Chr2g0290691 67.043 531 163 6 66 590 38 562 0.0 704
MsaG036529 MtrunA17_Chr7g0250631 69.820 444 121 5 150 590 282 715 0.0 642
MsaG036529 MtrunA17_Chr8g0335351 69.526 443 121 5 150 588 288 720 0.0 627
MsaG036529 MtrunA17_Chr7g0266031 67.424 396 122 4 194 589 455 843 0.0 560
MsaG036529 MtrunA17_Chr1g0179101 63.348 442 153 5 148 589 389 821 0.0 557
MsaG036529 MtrunA17_Chr8g0356291 64.250 400 132 6 193 589 87 478 1.73e-180 522
MsaG036529 MtrunA17_Chr2g0309421 61.538 429 149 6 186 606 131 551 2.96e-180 523
MsaG036529 MtrunA17_Chr3g0080101 63.889 396 135 4 197 590 380 769 1.20e-179 530
MsaG036529 MtrunA17_Chr4g0063311 55.500 400 153 7 207 589 66 457 1.83e-147 436
MsaG036529 MtrunA17_Chr2g0321101 53.125 384 153 8 211 582 66 434 2.09e-129 389
MsaG036529 MtrunA17_Chr2g0285711 46.785 451 185 7 167 589 2 425 1.92e-124 376
MsaG036529 MtrunA17_Chr8g0381091 49.624 399 158 10 207 589 52 423 1.74e-122 371
MsaG036529 MtrunA17_Chr2g0312641 45.012 411 179 10 185 588 49 419 8.69e-113 347
MsaG036529 MtrunA17_Chr8g0369091 45.995 387 156 3 207 591 572 907 4.24e-109 350
MsaG036529 MtrunA17_Chr4g0030361 45.812 382 153 3 207 588 282 609 6.21e-108 339
MsaG036529 MtrunA17_Chr2g0327561 47.644 382 157 5 207 588 601 939 1.65e-105 341
MsaG036529 MtrunA17_Chr8g0338741 39.130 391 180 14 220 589 8 361 3.44e-75 247
MsaG036529 MtrunA17_Chr4g0032761 37.500 376 204 8 229 589 10 369 1.51e-73 242
MsaG036529 MtrunA17_Chr2g0329011 36.883 385 196 10 229 609 12 353 7.15e-72 237
MsaG036529 MtrunA17_Chr7g0234641 34.133 375 213 9 229 594 8 357 3.27e-64 218
MsaG036529 MtrunA17_Chr4g0018201 35.345 348 173 6 231 577 756 1052 5.81e-59 214
MsaG036529 MtrunA17_Chr5g0428981 35.057 348 174 6 231 577 760 1056 6.66e-59 214
MsaG036529 MtrunA17_Chr6g0478601 35.294 357 180 10 234 589 111 417 2.02e-56 199
MsaG036529 MtrunA17_Chr1g0153321 32.153 367 199 8 220 580 94 416 9.64e-54 192
MsaG036529 MtrunA17_Chr3g0135951 31.204 407 227 11 177 577 47 406 1.30e-53 191
MsaG036529 MtrunA17_Chr1g0183651 30.952 378 206 10 220 588 106 437 6.79e-49 179
MsaG036529 MtrunA17_Chr2g0299781 29.268 410 227 9 179 577 68 425 3.37e-48 177
MsaG036529 MtrunA17_Chr7g0261491 29.398 432 229 13 179 600 75 440 6.47e-48 177
MsaG036529 MtrunA17_Chr1g0187581 30.709 381 204 11 220 588 103 435 8.01e-48 176
MsaG036529 MtrunA17_Chr1g0167351 31.536 371 198 10 234 600 110 428 1.99e-47 175
MsaG036529 MtrunA17_Chr1g0167311 30.471 361 204 9 234 590 115 432 4.51e-44 165
MsaG036529 MtrunA17_Chr7g0245031 34.010 197 114 3 222 418 138 318 3.15e-28 118
MsaG036529 MtrunA17_Chr7g0245031 39.437 142 78 3 442 577 270 409 2.03e-20 94.7
MsaG036529 MtrunA17_Chr4g0059751 38.854 157 83 3 234 381 89 241 6.56e-27 114
MsaG036529 MtrunA17_Chr4g0059751 36.111 144 84 4 441 578 217 358 7.04e-21 95.9
MsaG036529 MtrunA17_Chr1g0197721 37.736 159 95 3 221 378 38 193 7.98e-26 111
MsaG036529 MtrunA17_Chr1g0197721 33.562 146 89 4 444 588 196 334 4.89e-13 72.0
MsaG036529 MtrunA17_Chr3g0140631 36.913 149 92 1 234 382 37 183 4.50e-22 97.1
MsaG036529 MtrunA17_Chr3g0140631 35.185 108 66 1 465 572 185 288 7.60e-15 75.9
MsaG036529 MtrunA17_Chr6g0453681 25.753 365 182 11 231 594 16 292 1.08e-21 99.0
MsaG036529 MtrunA17_Chr8g0351491 27.273 352 163 11 225 573 7 268 1.47e-21 95.1
MsaG036529 MtrunA17_Chr6g0468751 25.479 365 183 11 231 594 16 292 1.07e-20 95.9
MsaG036529 MtrunA17_Chr3g0125381 39.474 114 65 1 460 573 98 207 1.47e-20 90.9
MsaG036529 MtrunA17_Chr3g0125381 30.496 141 88 2 284 416 2 140 2.67e-11 63.9
MsaG036529 MtrunA17_Chr3g0107051 33.333 186 112 5 234 419 21 194 1.54e-19 91.7
MsaG036529 MtrunA17_Chr1g0205421 31.472 197 119 5 225 419 3 185 1.56e-18 89.0
MsaG036529 MtrunA17_Chr5g0432491 32.258 186 115 4 234 419 23 197 1.93e-18 88.6
MsaG036529 MtrunA17_Chr8g0379091 30.688 189 119 4 229 417 21 197 4.24e-18 87.8
MsaG036529 MtrunA17_Chr4g0013131 30.052 193 123 5 225 417 3 183 7.62e-18 86.7
MsaG036529 MtrunA17_Chr3g0114511 30.288 208 118 5 226 418 24 219 7.64e-18 86.7
MsaG036529 MtrunA17_Chr3g0107011 28.877 187 121 3 231 417 11 185 9.10e-18 86.7
MsaG036529 MtrunA17_Chr2g0284031 30.366 191 121 4 229 419 26 204 9.70e-18 86.7
MsaG036529 MtrunA17_Chr8g0353621 33.333 150 98 1 234 383 10 157 1.15e-17 83.6
MsaG036529 MtrunA17_Chr8g0353621 41.837 98 53 1 474 571 167 260 1.31e-15 77.4
MsaG036529 MtrunA17_Chr1g0188031 34.667 150 94 4 234 381 20 167 1.83e-17 85.5
MsaG036529 MtrunA17_Chr2g0286501 34.416 154 91 3 231 383 46 190 4.66e-17 85.9
MsaG036529 MtrunA17_Chr1g0200601 34.731 167 97 5 220 382 22 180 1.55e-16 82.8
MsaG036529 MtrunA17_Chr4g0074111 29.032 186 120 4 234 419 18 191 2.37e-16 81.6
MsaG036529 MtrunA17_Chr7g0272841 30.645 186 114 5 234 412 68 245 4.99e-16 82.0
MsaG036529 MtrunA17_Chr2g0321841 27.632 152 108 2 231 381 1 151 6.05e-16 82.0
MsaG036529 MtrunA17_Chr7g0244521 28.796 191 124 4 227 417 5 183 1.00e-15 80.1
MsaG036529 MtrunA17_Chr2g0302431 30.247 162 111 2 220 381 6 165 1.20e-15 80.1
MsaG036529 MtrunA17_Chr7g0274941 31.579 152 99 3 229 378 11 159 1.30e-15 78.2
MsaG036529 MtrunA17_Chr7g0274941 36.275 102 58 3 473 571 176 273 4.75e-11 64.3
MsaG036529 MtrunA17_Chr5g0432471 27.273 187 124 4 231 417 9 183 1.52e-15 79.7
MsaG036529 MtrunA17_Chr1g0190831 29.032 155 102 3 231 381 1 151 1.60e-15 80.1
MsaG036529 MtrunA17_Chr1g0173921 26.316 152 110 2 231 381 1 151 2.29e-15 80.1
MsaG036529 MtrunA17_Chr8g0385341 34.641 153 94 4 234 382 30 180 2.43e-15 79.3
MsaG036529 MtrunA17_Chr4g0025671 26.797 153 110 2 230 381 4 155 2.56e-15 80.1
MsaG036529 MtrunA17_Chr5g0419441 29.448 163 110 3 234 396 239 396 6.53e-15 78.6
MsaG036529 MtrunA17_Chr4g0001331 31.081 148 99 2 234 381 20 164 1.80e-14 76.3
MsaG036529 MtrunA17_Chr1g0203881 31.111 180 112 5 206 381 19 190 2.45e-14 75.9
MsaG036529 MtrunA17_Chr1g0166101 32.215 149 98 2 234 381 24 170 2.46e-14 75.5
MsaG036529 MtrunA17_Chr4g0063881 30.556 144 98 1 238 381 15 156 2.77e-14 75.5
MsaG036529 MtrunA17_Chr5g0428031 28.378 148 104 2 234 381 9 154 2.97e-14 75.5
MsaG036529 MtrunA17_Chr7g0258051 25.161 155 114 2 230 383 12 165 3.49e-14 75.9
MsaG036529 MtrunA17_Chr8g0346071 26.263 198 128 4 220 417 8 187 3.69e-14 75.1
MsaG036529 MtrunA17_Chr1g0170551 33.019 106 65 2 471 576 162 261 4.05e-14 76.3
MsaG036529 MtrunA17_Chr2g0304111 30.405 148 101 2 234 381 23 168 4.81e-14 75.1
MsaG036529 MtrunA17_Chr6g0486661 34.615 130 75 5 465 588 909 1034 5.34e-14 75.9
MsaG036529 MtrunA17_Chr3g0091311 28.902 173 113 3 226 398 4 166 7.05e-14 72.0
MsaG036529 MtrunA17_Chr2g0284011 27.692 195 125 4 227 419 5 185 9.11e-14 73.9
MsaG036529 MtrunA17_Chr3g0098951 28.505 214 138 6 228 435 76 280 9.32e-14 74.3
MsaG036529 MtrunA17_Chr5g0448721 30.939 181 116 5 234 412 96 269 9.58e-14 74.3
MsaG036529 MtrunA17_Chr5g0444181 30.539 167 110 4 234 396 91 255 1.16e-13 71.6
MsaG036529 MtrunA17_Chr1g0170281 28.054 221 146 5 219 435 103 314 1.30e-13 73.9
MsaG036529 MtrunA17_Chr1g0185221 27.632 152 108 2 231 381 1 151 1.58e-13 73.9
MsaG036529 MtrunA17_Chr1g0181821 28.049 246 164 7 218 457 58 296 1.79e-13 72.4
MsaG036529 MtrunA17_Chr7g0260191 25.658 152 111 2 231 381 1 151 1.89e-13 73.6
MsaG036529 MtrunA17_Chr1g0150321 30.645 186 117 5 234 419 13 186 2.19e-13 72.8
MsaG036529 MtrunA17_Chr1g0173541 31.016 187 116 6 231 413 49 226 2.22e-13 73.2
MsaG036529 MtrunA17_Chr5g0405421 26.316 209 143 3 232 436 97 298 3.43e-13 72.4
MsaG036529 MtrunA17_Chr4g0074811 30.270 185 116 5 232 412 89 264 3.88e-13 72.4
MsaG036529 MtrunA17_Chr5g0444171 29.508 183 116 5 234 412 92 265 4.43e-13 72.0
MsaG036529 MtrunA17_Chr3g0131181 35.065 154 92 6 234 382 29 179 5.67e-13 71.6
MsaG036529 MtrunA17_Chr3g0132591 31.818 176 98 4 240 414 118 272 7.79e-13 71.2
MsaG036529 MtrunA17_Chr5g0441011 29.861 144 99 2 238 381 17 158 7.90e-13 70.9
MsaG036529 MtrunA17_Chr1g0157131 27.184 206 137 5 234 435 74 270 8.93e-13 71.2
MsaG036529 MtrunA17_Chr7g0256001 30.481 187 115 7 233 412 140 318 9.15e-13 71.2
MsaG036529 MtrunA17_Chr8g0345801 33.333 129 83 3 239 367 20 145 1.03e-12 68.9
MsaG036529 MtrunA17_Chr8g0346081 24.103 195 130 3 223 417 11 187 1.26e-12 70.5
MsaG036529 MtrunA17_Chr1g0202831 29.282 181 111 4 238 413 415 583 1.61e-12 70.9
MsaG036529 MtrunA17_Chr5g0441691 31.373 153 99 4 234 382 68 218 1.71e-12 70.1
MsaG036529 MtrunA17_Chr3g0130151 28.814 177 115 3 238 412 248 415 1.83e-12 70.5
MsaG036529 MtrunA17_Chr3g0127571 27.751 209 136 7 234 435 138 338 1.88e-12 70.5
MsaG036529 MtrunA17_Chr1g0176421 32.484 157 102 4 234 388 161 315 1.88e-12 70.5
MsaG036529 MtrunA17_Chr3g0133541 27.570 214 137 4 233 436 306 511 2.04e-12 70.5
MsaG036529 MtrunA17_Chr2g0317001 26.667 180 122 4 234 413 15 184 2.15e-12 70.5
MsaG036529 MtrunA17_Chr1g0205931 29.464 224 130 9 222 436 53 257 2.25e-12 70.1
MsaG036529 MtrunA17_Chr4g0008561 35.577 104 61 3 471 572 177 276 3.57e-12 69.7
MsaG036529 MtrunA17_Chr0c02g0489761 28.804 184 118 5 234 413 78 252 3.81e-12 69.3
MsaG036529 MtrunA17_Chr5g0409421 30.719 153 97 4 231 381 1 146 3.84e-12 68.9
MsaG036529 MtrunA17_Chr8g0374701 30.114 176 108 6 242 412 140 305 3.95e-12 69.3
MsaG036529 MtrunA17_Chr8g0387671 28.155 206 135 5 234 435 66 262 3.97e-12 68.9
MsaG036529 MtrunA17_Chr4g0045261 29.878 164 107 5 261 422 167 324 4.31e-12 69.3
MsaG036529 MtrunA17_Chr7g0267751 29.146 199 126 6 220 413 121 309 4.81e-12 68.9
MsaG036529 MtrunA17_Chr7g0267751 35.577 104 60 3 472 573 296 394 1.41e-11 67.4
MsaG036529 MtrunA17_Chr3g0091281 28.866 194 121 6 226 417 4 182 5.25e-12 66.2
MsaG036529 MtrunA17_Chr8g0386981 27.841 176 116 3 240 413 414 580 8.20e-12 68.6
MsaG036529 MtrunA17_Chr2g0333821 28.495 186 121 4 234 419 14 187 8.87e-12 67.8
MsaG036529 MtrunA17_Chr2g0276831 23.796 353 173 14 238 572 14 288 9.02e-12 67.4
MsaG036529 MtrunA17_Chr8g0384301 29.213 178 113 5 238 412 303 470 1.02e-11 68.2
MsaG036529 MtrunA17_Chr3g0129721 32.317 164 100 5 224 381 14 172 1.19e-11 65.9
MsaG036529 MtrunA17_Chr1g0176751 33.913 115 63 4 473 585 286 389 1.47e-11 67.4
MsaG036529 MtrunA17_Chr4g0033371 31.492 181 115 6 234 412 72 245 1.61e-11 67.4
MsaG036529 MtrunA17_Chr3g0091421 27.979 193 122 6 227 417 5 182 1.73e-11 64.7
MsaG036529 MtrunA17_Chr7g0257751 31.373 153 99 4 234 382 58 208 1.85e-11 67.0
MsaG036529 MtrunA17_Chr3g0091291 28.934 197 121 6 280 470 4 187 1.95e-11 63.9
MsaG036529 MtrunA17_Chr1g0190131 26.712 146 103 2 234 378 9 151 2.52e-11 64.7
MsaG036529 MtrunA17_Chr1g0190131 34.314 102 61 2 473 572 167 264 6.06e-11 63.5
MsaG036529 MtrunA17_Chr4g0059951 32.026 153 98 4 234 382 73 223 3.70e-11 66.2
MsaG036529 MtrunA17_Chr4g0000431 32.000 150 98 3 233 381 23 169 4.03e-11 66.2
MsaG036529 MtrunA17_Chr5g0402551 30.769 156 96 4 261 412 164 311 4.22e-11 65.9
MsaG036529 MtrunA17_Chr4g0047191 30.693 101 70 0 281 381 94 194 5.50e-11 64.7
MsaG036529 MtrunA17_Chr2g0330211 27.922 154 108 2 229 381 13 164 6.05e-11 65.5
MsaG036529 MtrunA17_Chr4g0047211 30.693 101 70 0 281 381 89 189 6.92e-11 64.3
MsaG036529 MtrunA17_Chr1g0188991 26.667 195 125 5 232 425 13 190 7.70e-11 65.5
MsaG036529 MtrunA17_Chr6g0450571 30.519 154 103 3 229 381 11 161 9.07e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036529 AT5G47750.1 75.501 449 96 6 177 615 134 578 0.0 684
MsaG036529 AT3G27580.2 71.338 471 117 8 124 590 78 534 0.0 659
MsaG036529 AT3G27580.1 71.338 471 117 8 124 590 78 534 0.0 659
MsaG036529 AT4G26610.1 75.587 426 91 6 170 590 57 474 0.0 654
MsaG036529 AT5G55910.2 68.880 482 133 5 133 609 14 483 0.0 652
MsaG036529 AT5G55910.1 68.880 482 133 5 133 609 14 483 0.0 652
MsaG036529 AT2G44830.2 67.320 459 138 8 164 621 295 742 0.0 612
MsaG036529 AT2G44830.3 67.320 459 138 8 164 621 295 742 0.0 612
MsaG036529 AT2G44830.1 67.320 459 138 8 164 621 295 742 0.0 612
MsaG036529 AT5G40030.1 69.351 385 108 5 207 590 86 461 0.0 561
MsaG036529 AT1G79250.1 67.602 392 123 3 198 589 110 497 0.0 545
MsaG036529 AT1G79250.3 67.602 392 123 3 198 589 110 497 0.0 545
MsaG036529 AT1G79250.2 67.602 392 123 3 198 589 110 497 0.0 545
MsaG036529 AT1G79250.4 67.602 392 123 3 198 589 110 497 0.0 545
MsaG036529 AT3G52890.2 58.635 469 175 7 132 589 436 896 0.0 537
MsaG036529 AT3G52890.4 58.635 469 175 7 132 589 436 896 0.0 537
MsaG036529 AT3G52890.1 58.635 469 175 7 132 589 436 896 0.0 537
MsaG036529 AT3G52890.3 58.635 469 175 7 132 589 436 896 0.0 537
MsaG036529 AT5G03640.2 51.873 534 221 6 66 589 388 895 1.15e-180 536
MsaG036529 AT5G03640.1 51.873 534 221 6 66 589 388 895 1.15e-180 536
MsaG036529 AT3G12690.1 64.433 388 124 2 202 589 153 526 6.06e-180 523
MsaG036529 AT3G12690.3 64.433 388 124 2 202 589 153 526 6.06e-180 523
MsaG036529 AT3G12690.2 64.433 388 124 2 202 589 153 526 6.06e-180 523
MsaG036529 AT1G16440.1 64.935 385 116 5 207 589 86 453 1.31e-176 511
MsaG036529 AT2G36350.1 63.731 386 135 4 207 589 532 915 1.79e-174 521
MsaG036529 AT2G26700.1 48.077 468 181 11 178 591 25 484 4.66e-133 401
MsaG036529 AT3G44610.1 54.472 369 132 9 234 582 71 423 2.32e-129 389
MsaG036529 AT2G34650.1 48.910 413 169 8 190 594 38 416 5.21e-127 382
MsaG036529 AT5G58140.6 44.000 400 168 4 208 607 551 894 1.58e-106 343
MsaG036529 AT5G58140.7 44.000 400 168 4 208 607 551 894 1.58e-106 343
MsaG036529 AT5G58140.5 44.000 400 168 4 208 607 551 894 1.58e-106 343
MsaG036529 AT5G58140.2 44.000 400 168 4 208 607 551 894 1.58e-106 343
MsaG036529 AT5G58140.1 44.000 400 168 4 208 607 551 894 1.58e-106 343
MsaG036529 AT3G14370.1 43.990 391 173 5 209 590 61 414 3.78e-106 330
MsaG036529 AT5G58140.3 45.187 374 154 3 208 581 551 873 1.66e-104 337
MsaG036529 AT3G45780.2 46.073 382 157 6 207 588 636 968 8.45e-99 324
MsaG036529 AT3G45780.1 46.073 382 157 6 207 588 636 968 8.45e-99 324
MsaG036529 AT1G51170.1 38.710 372 187 11 229 589 17 358 2.02e-69 231
MsaG036529 AT3G20830.1 38.770 374 186 12 229 589 16 359 1.56e-68 229
MsaG036529 AT3G25250.1 35.310 371 197 9 228 589 11 347 5.34e-66 223
MsaG036529 AT4G13000.1 34.146 369 192 8 229 589 15 340 3.92e-64 216
MsaG036529 AT1G45160.2 34.435 363 180 6 229 587 665 973 3.93e-54 200
MsaG036529 AT5G62310.1 33.161 386 192 9 193 577 728 1048 7.12e-54 199
MsaG036529 AT1G45160.1 34.435 363 180 6 229 587 665 973 8.11e-54 199
MsaG036529 AT1G53700.1 49.451 182 87 3 209 386 66 246 6.82e-53 189
MsaG036529 AT1G53700.1 49.677 155 68 2 457 601 284 438 1.80e-38 149
MsaG036529 AT1G30640.3 31.565 377 213 11 219 590 12 348 3.04e-51 184
MsaG036529 AT1G30640.2 31.565 377 213 11 219 590 105 441 3.77e-51 186
MsaG036529 AT1G30640.1 31.565 377 213 11 219 590 105 441 3.77e-51 186
MsaG036529 AT4G33080.2 31.169 385 220 10 213 588 73 421 1.25e-50 183
MsaG036529 AT4G33080.1 31.169 385 220 10 213 588 73 421 1.44e-50 184
MsaG036529 AT1G48490.3 32.181 376 187 8 208 577 803 1116 1.51e-50 190
MsaG036529 AT1G48490.2 32.181 376 187 8 208 577 803 1116 1.51e-50 190
MsaG036529 AT1G48490.1 32.181 376 187 8 208 577 803 1116 1.51e-50 190
MsaG036529 AT1G48490.4 32.181 376 187 8 208 577 804 1117 1.54e-50 189
MsaG036529 AT5G09890.1 32.597 362 200 8 220 577 88 409 1.89e-50 183
MsaG036529 AT5G09890.2 32.597 362 200 8 220 577 88 409 2.10e-50 183
MsaG036529 AT3G17850.1 33.623 345 178 9 234 577 882 1176 2.99e-48 183
MsaG036529 AT2G20470.3 28.319 452 257 13 149 588 44 440 6.72e-47 174
MsaG036529 AT1G03920.1 30.023 433 231 15 174 600 87 453 9.36e-47 174
MsaG036529 AT1G03920.3 30.023 433 231 15 174 600 87 453 9.36e-47 174
MsaG036529 AT2G20470.2 28.319 452 257 13 149 588 44 440 1.10e-46 174
MsaG036529 AT2G20470.1 28.319 452 257 13 149 588 44 440 1.10e-46 174
MsaG036529 AT1G03920.2 32.172 373 191 13 234 600 24 340 2.34e-46 171
MsaG036529 AT4G14350.2 31.733 375 191 12 234 600 119 436 1.53e-45 170
MsaG036529 AT4G14350.1 31.733 375 191 12 234 600 119 436 1.53e-45 170
MsaG036529 AT4G14350.4 31.733 375 191 12 234 600 119 436 1.53e-45 170
MsaG036529 AT4G14350.3 31.733 375 191 12 234 600 119 436 1.76e-45 170
MsaG036529 AT3G23310.1 30.645 372 201 10 234 600 120 439 2.94e-45 170
MsaG036529 AT2G19400.1 27.252 444 269 10 147 577 17 419 3.85e-44 166
MsaG036529 AT5G58140.4 48.092 131 68 0 208 338 551 681 5.65e-33 135
MsaG036529 AT3G08720.1 35.079 191 110 2 227 417 133 309 1.29e-28 120
MsaG036529 AT3G08720.1 40.123 162 83 5 427 577 242 400 5.82e-25 108
MsaG036529 AT3G08720.3 35.079 191 110 2 227 417 133 309 1.29e-28 120
MsaG036529 AT3G08720.3 40.123 162 83 5 427 577 242 400 5.82e-25 108
MsaG036529 AT3G08720.4 35.079 191 110 2 227 417 133 309 1.29e-28 120
MsaG036529 AT3G08720.4 40.123 162 83 5 427 577 242 400 5.82e-25 108
MsaG036529 AT3G08720.2 35.079 191 110 2 227 417 133 309 1.29e-28 120
MsaG036529 AT3G08720.2 40.123 162 83 5 427 577 242 400 5.82e-25 108
MsaG036529 AT3G08730.1 34.555 191 111 2 227 417 127 303 3.61e-28 118
MsaG036529 AT3G08730.1 40.123 162 83 5 427 577 236 394 2.21e-25 110
MsaG036529 AT3G08730.2 34.555 191 111 2 227 417 127 303 3.61e-28 118
MsaG036529 AT3G08730.2 40.123 162 83 5 427 577 236 394 2.21e-25 110
MsaG036529 AT5G04510.3 40.690 145 84 2 234 378 44 186 1.32e-26 110
MsaG036529 AT5G04510.2 40.690 145 84 2 234 378 44 186 2.52e-26 112
MsaG036529 AT5G04510.2 32.704 159 99 4 444 601 189 340 2.77e-19 91.3
MsaG036529 AT5G04510.1 40.690 145 84 2 234 378 44 186 3.05e-26 113
MsaG036529 AT5G04510.1 32.704 159 99 4 444 601 189 340 4.18e-19 91.3
MsaG036529 AT3G10540.1 39.310 145 86 2 234 378 45 187 1.38e-24 108
MsaG036529 AT3G10540.1 30.726 179 116 4 444 621 190 361 2.82e-19 91.7
MsaG036529 AT3G01090.3 25.895 363 180 11 233 594 18 292 5.30e-22 100
MsaG036529 AT3G01090.1 25.895 363 180 11 233 594 18 292 5.30e-22 100
MsaG036529 AT3G01090.2 25.895 363 180 11 233 594 41 315 6.85e-22 100
MsaG036529 AT3G29160.3 25.600 375 188 12 223 594 7 293 3.81e-21 95.9
MsaG036529 AT5G18700.1 38.411 151 85 3 231 381 1 143 1.16e-20 97.8
MsaG036529 AT3G29160.1 25.600 375 188 12 223 594 7 293 1.39e-20 95.9
MsaG036529 AT3G29160.2 25.600 375 188 12 223 594 7 293 1.39e-20 95.9
MsaG036529 AT2G25880.1 36.242 149 93 1 234 382 25 171 8.97e-20 90.5
MsaG036529 AT2G25880.1 38.053 113 65 2 465 576 173 281 9.65e-16 78.6
MsaG036529 AT4G32830.1 36.242 149 93 1 234 382 31 177 9.19e-20 90.9
MsaG036529 AT4G32830.1 36.111 108 65 1 465 572 179 282 6.53e-15 76.3
MsaG036529 AT2G25880.4 36.242 149 93 1 234 382 38 184 1.35e-19 90.5
MsaG036529 AT2G25880.4 38.053 113 65 2 465 576 186 294 1.00e-15 79.0
MsaG036529 AT2G25880.3 36.242 149 93 1 234 382 86 232 3.21e-19 90.1
MsaG036529 AT2G25880.3 38.318 107 62 1 465 571 234 336 2.98e-15 78.2
MsaG036529 AT1G12680.1 32.584 178 98 5 238 414 111 267 6.65e-19 90.5
MsaG036529 AT2G45490.2 32.895 152 100 2 234 385 22 171 7.30e-19 87.0
MsaG036529 AT2G45490.2 38.636 88 53 1 462 549 168 254 5.66e-13 69.7
MsaG036529 AT2G45490.1 32.895 152 100 2 234 385 22 171 7.63e-19 87.8
MsaG036529 AT2G45490.1 39.640 111 62 2 462 572 168 273 2.33e-18 86.3
MsaG036529 AT4G18700.1 30.208 192 122 4 228 419 20 199 1.68e-18 89.4
MsaG036529 AT5G45810.1 29.688 192 123 4 228 419 22 201 1.79e-18 89.4
MsaG036529 AT2G30360.1 35.570 149 93 3 234 381 21 167 1.21e-17 86.3
MsaG036529 AT5G45820.1 30.102 196 123 5 225 419 3 185 2.94e-17 85.1
MsaG036529 AT1G35670.1 32.323 198 115 6 220 413 18 200 4.49e-17 85.1
MsaG036529 AT5G25110.1 29.064 203 127 5 217 419 31 216 4.51e-17 85.1
MsaG036529 AT2G20050.1 37.931 116 66 3 468 580 934 1046 7.44e-17 85.5
MsaG036529 AT2G20050.2 37.931 116 66 3 468 580 931 1043 8.04e-17 85.5
MsaG036529 AT5G10930.1 32.161 199 115 7 223 419 6 186 1.45e-16 83.2
MsaG036529 AT1G29230.1 30.366 191 117 4 231 419 71 247 1.55e-16 83.6
MsaG036529 AT5G28290.3 28.947 152 106 2 231 381 1 151 4.51e-16 82.0
MsaG036529 AT5G28290.1 28.947 152 106 2 231 381 1 151 4.90e-16 82.0
MsaG036529 AT5G28290.2 28.947 152 106 2 231 381 1 151 4.90e-16 82.0
MsaG036529 AT3G04810.2 27.632 152 108 2 231 381 1 151 5.18e-16 82.0
MsaG036529 AT3G04810.1 27.632 152 108 2 231 381 1 151 5.18e-16 82.0
MsaG036529 AT3G04810.3 27.632 152 108 2 231 381 1 151 5.18e-16 82.0
MsaG036529 AT2G25880.2 38.053 113 65 2 465 576 141 249 5.29e-16 79.0
MsaG036529 AT4G24400.1 27.174 184 121 3 234 417 9 179 7.02e-16 80.9
MsaG036529 AT2G34180.1 28.426 197 129 3 223 419 46 230 7.14e-16 81.3
MsaG036529 AT4G24400.2 27.174 184 121 3 234 417 9 179 8.96e-16 80.5
MsaG036529 AT4G09570.1 31.795 195 114 6 223 413 20 199 1.07e-15 80.9
MsaG036529 AT4G04720.2 22.832 346 179 9 232 573 78 339 1.12e-15 80.9
MsaG036529 AT4G04720.1 22.832 346 179 9 232 573 78 339 1.12e-15 80.9
MsaG036529 AT3G06030.1 32.353 204 115 7 215 412 59 245 1.50e-15 80.9
MsaG036529 AT3G44200.2 27.632 152 108 2 231 381 5 155 2.32e-15 80.5
MsaG036529 AT3G44200.1 27.632 152 108 2 231 381 5 155 2.32e-15 80.5
MsaG036529 AT5G01820.1 32.787 183 109 4 238 419 26 195 2.65e-15 79.3
MsaG036529 AT5G01810.3 30.570 193 122 5 225 417 3 183 2.79e-15 78.6
MsaG036529 AT5G01810.1 30.570 193 122 5 225 417 3 183 2.91e-15 79.0
MsaG036529 AT5G01810.2 30.570 193 122 5 225 417 3 183 2.91e-15 79.0
MsaG036529 AT1G54510.4 26.974 152 109 2 231 381 1 151 4.75e-15 79.0
MsaG036529 AT1G54510.2 26.974 152 109 2 231 381 1 151 4.75e-15 79.0
MsaG036529 AT1G54510.1 26.974 152 109 2 231 381 1 151 4.75e-15 79.0
MsaG036529 AT1G54510.3 26.974 152 109 2 231 381 1 151 4.75e-15 79.0
MsaG036529 AT3G63280.2 28.289 152 107 2 231 381 1 151 5.80e-15 78.6
MsaG036529 AT3G63280.3 28.289 152 107 2 231 381 1 151 5.80e-15 78.6
MsaG036529 AT3G63280.1 28.289 152 107 2 231 381 1 151 5.80e-15 78.6
MsaG036529 AT3G63280.4 28.105 153 108 2 230 381 54 205 6.03e-15 78.6
MsaG036529 AT1G54960.1 30.045 223 132 8 222 437 66 271 6.28e-15 79.0
MsaG036529 AT1G54960.2 30.045 223 132 8 222 437 66 271 6.28e-15 79.0
MsaG036529 AT2G38490.1 32.632 190 108 7 234 419 28 201 6.74e-15 77.8
MsaG036529 AT5G57630.2 31.847 157 100 4 227 381 5 156 7.45e-15 77.4
MsaG036529 AT4G14580.1 27.059 255 164 8 227 472 14 255 8.58e-15 77.4
MsaG036529 AT1G09000.2 27.619 210 140 5 234 437 69 272 9.09e-15 78.2
MsaG036529 AT3G20860.1 26.490 151 110 1 231 381 1 150 9.53e-15 77.4
MsaG036529 AT1G09000.1 27.619 210 140 5 234 437 69 272 9.90e-15 78.2
MsaG036529 AT1G50240.3 31.429 140 81 3 471 610 161 285 1.03e-14 78.6
MsaG036529 AT1G50240.2 31.429 140 81 3 471 610 161 285 1.03e-14 78.6
MsaG036529 AT5G57630.1 31.847 157 100 4 227 381 5 156 1.08e-14 77.0
MsaG036529 AT3G17510.1 30.519 154 105 2 228 381 14 165 1.25e-14 77.0
MsaG036529 AT1G69220.1 30.061 163 109 3 234 396 249 406 1.26e-14 78.2
MsaG036529 AT2G25090.1 34.722 144 89 4 240 381 21 161 3.24e-14 75.9
MsaG036529 AT1G50700.3 29.612 206 132 5 234 435 73 269 4.88e-14 75.5
MsaG036529 AT5G39440.1 33.557 149 97 2 233 381 18 164 5.68e-14 75.1
MsaG036529 AT5G39440.1 37.624 101 57 3 474 574 178 272 6.79e-11 65.5
MsaG036529 AT1G50700.1 29.612 206 132 5 234 435 73 269 8.71e-14 74.7
MsaG036529 AT4G30960.1 28.571 196 120 4 228 419 18 197 9.07e-14 74.3
MsaG036529 AT3G23000.1 32.215 149 98 3 234 381 25 171 9.47e-14 74.3
MsaG036529 AT5G35410.2 30.556 144 98 2 238 381 15 156 9.47e-14 73.9
MsaG036529 AT1G50700.2 30.978 184 114 5 234 413 73 247 1.13e-13 74.7
MsaG036529 AT2G46700.1 28.333 180 117 4 260 435 172 343 1.29e-13 74.3
MsaG036529 AT3G20410.2 30.055 183 115 5 234 412 91 264 1.76e-13 73.9
MsaG036529 AT3G20410.1 30.055 183 115 5 234 412 91 264 1.76e-13 73.9
MsaG036529 AT1G30270.1 28.378 148 104 1 234 381 31 176 1.78e-13 73.6
MsaG036529 AT5G35410.1 30.556 144 98 2 238 381 15 156 1.86e-13 73.6
MsaG036529 AT5G21326.1 30.405 148 101 2 234 381 13 158 1.98e-13 73.2
MsaG036529 AT1G76040.2 28.641 206 134 5 234 435 112 308 2.16e-13 73.6
MsaG036529 AT1G30270.2 28.378 148 104 1 234 381 31 176 2.43e-13 73.2
MsaG036529 AT2G26980.2 29.167 144 100 2 238 381 18 159 2.66e-13 71.2
MsaG036529 AT1G76040.3 28.641 206 134 5 234 435 112 308 2.81e-13 73.2
MsaG036529 AT2G26980.1 28.378 148 104 2 234 381 14 159 3.05e-13 72.4
MsaG036529 AT2G26980.3 28.395 162 109 3 220 381 5 159 3.42e-13 72.4
MsaG036529 AT2G26980.4 28.395 162 109 3 220 381 15 169 3.50e-13 72.8
MsaG036529 AT4G04710.2 28.571 210 137 6 232 435 34 236 3.53e-13 72.8
MsaG036529 AT2G17890.1 29.834 181 114 5 238 413 112 284 3.69e-13 72.8
MsaG036529 AT1G01140.1 28.743 167 112 3 215 381 5 164 3.90e-13 72.4
MsaG036529 AT1G01140.3 28.743 167 112 3 215 381 5 164 4.03e-13 72.4
MsaG036529 AT4G04710.4 28.571 210 137 6 232 435 34 236 4.24e-13 72.4
MsaG036529 AT1G01140.2 28.743 167 112 3 215 381 5 164 4.37e-13 72.4
MsaG036529 AT4G04710.1 28.571 210 137 6 232 435 34 236 4.41e-13 72.4
MsaG036529 AT2G35890.2 27.481 262 172 9 185 437 78 330 4.42e-13 72.4
MsaG036529 AT2G35890.1 27.481 262 172 9 185 437 78 330 4.42e-13 72.4
MsaG036529 AT2G26980.5 29.167 144 100 2 238 381 18 159 4.93e-13 72.0
MsaG036529 AT2G41860.1 32.026 153 98 4 234 382 54 204 5.44e-13 72.4
MsaG036529 AT2G41860.2 32.026 153 98 4 234 382 54 204 5.49e-13 72.4
MsaG036529 AT4G35310.2 29.834 181 118 5 234 412 97 270 6.05e-13 72.4
MsaG036529 AT4G35310.1 29.834 181 118 5 234 412 97 270 6.05e-13 72.4
MsaG036529 AT1G53570.7 28.814 177 115 3 238 412 218 385 8.62e-13 71.6
MsaG036529 AT1G53570.6 28.814 177 115 3 238 412 218 385 8.75e-13 71.6
MsaG036529 AT3G10660.2 29.612 206 132 5 234 435 186 382 1.08e-12 71.6
MsaG036529 AT3G10660.1 29.612 206 132 5 234 435 186 382 1.08e-12 71.6
MsaG036529 AT4G21940.2 28.415 183 118 4 234 412 102 275 1.31e-12 71.2
MsaG036529 AT4G21940.2 31.667 120 67 4 472 589 263 369 1.82e-11 67.4
MsaG036529 AT4G21940.3 28.415 183 118 4 234 412 102 275 1.32e-12 70.9
MsaG036529 AT4G21940.3 31.667 120 67 4 472 589 263 369 2.37e-11 67.0
MsaG036529 AT1G32320.1 33.333 147 86 4 237 381 51 187 1.36e-12 69.3
MsaG036529 AT1G69220.2 29.870 154 103 3 243 396 231 379 1.36e-12 71.6
MsaG036529 AT4G21940.1 28.415 183 118 4 234 412 102 275 1.39e-12 71.2
MsaG036529 AT4G21940.1 31.667 120 67 4 472 589 263 369 2.10e-11 67.4
MsaG036529 AT1G53570.1 28.814 177 115 3 238 412 218 385 1.44e-12 71.2
MsaG036529 AT1G53570.2 28.814 177 115 3 238 412 218 385 1.50e-12 71.2
MsaG036529 AT1G53570.3 28.814 177 115 3 238 412 218 385 1.50e-12 71.2
MsaG036529 AT5G04870.1 29.612 206 132 5 234 435 150 346 1.54e-12 71.2
MsaG036529 AT1G53570.4 28.814 177 115 3 238 412 218 385 1.56e-12 70.9
MsaG036529 AT2G31500.1 33.333 183 109 6 234 412 66 239 2.03e-12 70.5
MsaG036529 AT2G17290.1 31.847 157 103 4 234 388 85 239 2.04e-12 70.5
MsaG036529 AT2G17290.2 31.847 157 103 4 234 388 85 239 2.04e-12 70.5
MsaG036529 AT3G57530.2 32.680 153 97 4 234 382 63 213 2.07e-12 70.1
MsaG036529 AT5G66210.3 25.962 208 143 3 233 436 61 261 2.11e-12 70.5
MsaG036529 AT4G36070.1 25.000 208 145 3 233 436 70 270 2.46e-12 70.1
MsaG036529 AT3G57530.1 32.680 153 97 4 234 382 63 213 2.50e-12 70.1
MsaG036529 AT5G66210.6 25.962 208 143 3 233 436 61 261 2.53e-12 69.7
MsaG036529 AT5G66210.4 25.962 208 143 3 233 436 61 261 2.53e-12 69.7
MsaG036529 AT1G73500.1 31.250 160 93 5 237 393 50 195 2.59e-12 68.6
MsaG036529 AT5G66210.1 25.962 208 143 3 233 436 61 261 2.69e-12 70.1
MsaG036529 AT5G66210.2 25.962 208 143 3 233 436 61 261 2.69e-12 70.1
MsaG036529 AT5G66210.5 25.962 208 143 3 233 436 61 261 2.73e-12 69.7
MsaG036529 AT4G36070.2 25.000 208 145 3 233 436 70 270 2.92e-12 70.1
MsaG036529 AT1G48260.1 31.169 154 104 2 228 381 5 156 2.99e-12 69.7
MsaG036529 AT5G58380.1 25.000 180 119 4 240 417 18 183 3.11e-12 69.7
MsaG036529 AT4G19110.1 30.625 160 102 4 231 388 1 153 3.25e-12 69.7
MsaG036529 AT5G19360.1 32.680 153 97 4 234 382 68 218 3.26e-12 69.7
MsaG036529 AT4G19110.2 30.625 160 102 4 231 388 1 153 3.31e-12 69.7
MsaG036529 AT3G45240.3 28.659 164 107 3 226 381 100 261 3.33e-12 69.3
MsaG036529 AT5G12180.1 32.680 153 97 4 234 382 73 223 3.63e-12 69.7
MsaG036529 AT1G12580.1 29.293 198 129 7 189 381 2 193 3.68e-12 69.7
MsaG036529 AT1G12580.1 35.849 106 61 3 473 576 206 306 8.00e-12 68.6
MsaG036529 AT3G45240.2 28.659 164 107 3 226 381 100 261 3.96e-12 68.9
MsaG036529 AT3G45240.1 28.659 164 107 3 226 381 100 261 3.96e-12 68.9
MsaG036529 AT5G45430.2 31.250 160 101 5 231 388 1 153 4.25e-12 69.3
MsaG036529 AT4G38230.2 31.847 157 103 4 234 388 54 208 4.34e-12 69.3
MsaG036529 AT4G38230.4 31.847 157 103 4 234 388 24 178 4.81e-12 69.3
MsaG036529 AT4G38230.3 31.847 157 103 4 234 388 24 178 4.81e-12 69.3
MsaG036529 AT5G45430.1 31.250 160 101 5 231 388 1 153 5.08e-12 69.3
MsaG036529 AT3G61960.2 28.108 185 119 5 234 417 10 181 5.11e-12 69.3
MsaG036529 AT3G61960.1 28.108 185 119 5 234 417 10 181 5.47e-12 69.3
MsaG036529 AT5G12480.1 31.169 154 100 4 233 382 58 209 7.14e-12 68.9
MsaG036529 AT3G19100.1 30.488 164 106 5 261 422 174 331 7.66e-12 68.9
MsaG036529 AT2G38910.1 31.646 158 102 5 234 388 134 288 7.68e-12 68.9
MsaG036529 AT1G63700.1 27.841 176 116 3 240 413 406 572 7.90e-12 68.9
MsaG036529 AT1G63700.2 27.841 176 116 3 240 413 406 572 7.90e-12 68.9
MsaG036529 AT5G19450.2 32.026 153 98 4 234 382 57 207 8.92e-12 68.6
MsaG036529 AT5G19450.1 32.026 153 98 4 234 382 57 207 8.92e-12 68.6
MsaG036529 AT4G26070.1 32.099 162 103 5 222 381 56 212 1.15e-11 66.6
MsaG036529 AT1G08650.1 35.922 103 60 2 473 573 176 274 1.27e-11 66.2
MsaG036529 AT4G26070.4 32.278 158 100 5 226 381 59 211 1.59e-11 66.6
MsaG036529 AT5G24430.1 29.677 155 101 4 234 381 143 296 1.67e-11 67.8
MsaG036529 AT4G26070.2 32.099 162 103 5 222 381 56 212 1.74e-11 66.6
MsaG036529 AT4G26070.3 32.099 162 103 5 222 381 56 212 1.74e-11 66.6
MsaG036529 AT4G26070.5 32.278 158 100 5 226 381 47 199 1.75e-11 66.6
MsaG036529 AT1G53165.1 26.519 181 123 4 233 413 14 184 2.09e-11 67.4
MsaG036529 AT1G74740.1 30.435 184 115 5 234 413 59 233 2.13e-11 67.4
MsaG036529 AT1G53165.3 26.519 181 123 4 233 413 14 184 2.16e-11 67.4
MsaG036529 AT4G24100.1 26.804 194 126 3 232 425 31 208 2.23e-11 67.4
MsaG036529 AT1G53165.2 26.519 181 123 4 233 413 14 184 2.26e-11 67.4
MsaG036529 AT3G56760.1 31.847 157 99 5 261 415 154 304 2.37e-11 67.4
MsaG036529 AT1G61950.1 31.731 104 64 3 472 573 260 358 2.53e-11 67.0
MsaG036529 AT1G61950.1 27.568 185 120 5 234 413 98 273 6.03e-11 65.9
MsaG036529 AT4G24100.2 26.804 194 126 3 232 425 31 208 2.70e-11 67.4
MsaG036529 AT4G24100.4 26.804 194 126 3 232 425 47 224 2.71e-11 67.4
MsaG036529 AT5G38210.1 30.734 218 136 7 171 381 295 504 2.72e-11 67.0
MsaG036529 AT1G49580.1 28.313 166 107 4 261 422 180 337 2.79e-11 67.0
MsaG036529 AT4G24100.3 26.804 194 126 3 232 425 47 224 2.99e-11 67.0
MsaG036529 AT4G10010.2 33.557 149 96 3 234 381 156 302 3.06e-11 67.0
MsaG036529 AT5G02800.1 30.000 210 136 5 232 436 71 274 3.51e-11 65.9
MsaG036529 AT3G07980.1 26.203 187 125 5 234 417 20 196 3.57e-11 67.0
MsaG036529 AT3G49370.1 32.800 125 79 3 261 381 172 295 3.95e-11 66.6
MsaG036529 AT3G07980.2 26.203 187 125 5 234 417 20 196 4.01e-11 67.0
MsaG036529 AT4G14480.1 28.571 154 107 2 229 381 10 161 4.21e-11 66.2
MsaG036529 AT5G38210.2 30.734 218 136 7 171 381 307 516 4.53e-11 66.6
MsaG036529 AT2G41140.1 31.210 157 100 5 261 415 153 303 4.58e-11 66.2
MsaG036529 AT5G38210.3 30.734 218 136 7 171 381 289 498 4.70e-11 66.2
MsaG036529 AT5G20930.1 30.213 235 138 10 223 436 390 619 4.94e-11 66.2
MsaG036529 AT4G10730.2 27.179 195 124 5 232 425 25 202 5.44e-11 66.2
MsaG036529 AT5G23580.1 28.646 192 120 6 233 416 21 203 5.91e-11 65.9
MsaG036529 AT4G10730.1 27.179 195 124 5 232 425 45 222 6.36e-11 65.9
MsaG036529 AT3G50530.1 33.600 125 78 4 261 381 178 301 6.36e-11 65.9
MsaG036529 AT5G39420.1 30.531 226 144 8 161 381 34 251 6.86e-11 65.9
MsaG036529 AT3G50530.2 33.600 125 78 4 261 381 178 301 7.14e-11 65.9
MsaG036529 AT3G04530.1 31.429 105 66 2 473 575 172 272 7.97e-11 63.9
MsaG036529 AT5G57565.2 32.520 123 72 3 293 411 14 129 8.66e-11 60.5
MsaG036529 AT5G57565.6 32.520 123 72 3 293 411 14 129 8.66e-11 60.5

Find 152 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTTTCAAAATATTAAT+TGG 0.095945 7:-36905172 MsaT036529.1:CDS
CCTTCGCCTTTGATGATTTC+AGG 0.113160 7:+36905440 None:intergenic
TCGACGTCTCGGCCGCCTTT+AGG 0.160013 7:-36907984 MsaT036529.1:CDS
CGACGTCTCGGCCGCCTTTA+GGG 0.207015 7:-36907983 MsaT036529.1:CDS
TTGCTGCCAGGGACTTGATT+AGG 0.236663 7:-36905265 MsaT036529.1:CDS
ATCATTCTCTTGCTTGGTTA+TGG 0.249993 7:-36907151 MsaT036529.1:CDS
TGCTGCCAGGGACTTGATTA+GGG 0.259191 7:-36905264 MsaT036529.1:CDS
CTTAATTGATTATGCACAAT+AGG 0.264262 7:+36904675 None:intergenic
AGTGTTGGTGAAACTTTCTT+TGG 0.270096 7:+36907620 None:intergenic
AAGCTAACACTAGGGGATTC+TGG 0.278483 7:+36905287 None:intergenic
GCATAGTCAGATTTACCATT+AGG 0.284095 7:+36907870 None:intergenic
ATGGCCTGTCTCGGCACTTC+TGG 0.295974 7:+36905125 None:intergenic
GAGGTTCAGAAATCGGTTTC+CGG 0.310099 7:-36908026 MsaT036529.1:CDS
CATAGTCAGATTTACCATTA+GGG 0.317137 7:+36907871 None:intergenic
GGGTGTGAGTGCTGCTTTCA+TGG 0.323224 7:+36905106 None:intergenic
GGCAGAAGTTCTCCTTGCTT+TGG 0.324779 7:-36905861 MsaT036529.1:CDS
AGTGGAGAAGTTACTAATTC+AGG 0.335008 7:-36907558 MsaT036529.1:CDS
AGAATCTGACAATGGCATAC+TGG 0.336351 7:-36907739 MsaT036529.1:CDS
CACTCCAGGAGCCTTCTTCT+CGG 0.338362 7:+36905085 None:intergenic
TTTAGGTTGTTGAAGAAATT+GGG 0.339589 7:-36907363 MsaT036529.1:CDS
CAAACAACTTTCAAAAGTTT+CGG 0.350186 7:+36907839 None:intergenic
TTTACTAGAGGTTCAGAAAT+CGG 0.366576 7:-36908033 MsaT036529.1:CDS
CATTCAAAGGTTCGGCGAAT+CGG 0.369604 7:-36905349 MsaT036529.1:CDS
CAATTCAAGCGATCCGAGTT+CGG 0.372337 7:-36907410 MsaT036529.1:CDS
GCTCCTGGAGTGAAGCCTTC+TGG 0.385479 7:-36905074 MsaT036529.1:intron
AGGGGATTCTGGAAATCTTA+AGG 0.391512 7:+36905298 None:intergenic
CTAGTGTTAGCTTTGCTGCC+AGG 0.396245 7:-36905277 MsaT036529.1:CDS
ATTCTTTCAAAATATTAATT+GGG 0.398080 7:-36905171 MsaT036529.1:CDS
GACACCACTCCCTGAGCTTA+TGG 0.398891 7:-36905519 MsaT036529.1:CDS
AAATTGGGATGTGGAGATAT+AGG 0.401834 7:-36907348 MsaT036529.1:CDS
GACAGAATCATTCTCTTGCT+TGG 0.402863 7:-36907157 MsaT036529.1:CDS
CCAACACATTCTCGGGCTTA+AGG 0.405511 7:+36905804 None:intergenic
TCCGAGGTCTCACAAGGGTT+AGG 0.409087 7:-36904742 MsaT036529.1:CDS
TTCTCTCACCAACACATTCT+CGG 0.409977 7:+36905796 None:intergenic
TGTTGGCACGCACGAGTACT+TGG 0.410917 7:-36905465 MsaT036529.1:CDS
GCCCGATCAATGTCCTTTGT+TGG 0.419238 7:-36905482 MsaT036529.1:CDS
ATTCAAAGGTTCGGCGAATC+GGG 0.420245 7:-36905348 MsaT036529.1:CDS
GGCATACTGGGTTCATCAAA+AGG 0.422786 7:-36907726 MsaT036529.1:CDS
CCGCCTTTAGGGGCATATCA+AGG 0.423637 7:-36907972 MsaT036529.1:CDS
GGGGATTCTGGAAATCTTAA+GGG 0.428245 7:+36905299 None:intergenic
TTAATTGATTATGCACAATA+GGG 0.435510 7:+36904676 None:intergenic
GAGCAATATCACAACCCTAA+TGG 0.435943 7:-36907885 MsaT036529.1:CDS
GCAACTTTATTTAATGTAGT+CGG 0.437242 7:-36905326 MsaT036529.1:CDS
AGACTGCAATATCTCTCTTT+CGG 0.438999 7:+36907221 None:intergenic
TTGGAGTACTTGCACATGCT+TGG 0.440491 7:-36905842 MsaT036529.1:CDS
GACATTGATCGGGCATTTGT+GGG 0.442827 7:+36905491 None:intergenic
AATTCAAGCGATCCGAGTTC+GGG 0.443741 7:-36907409 MsaT036529.1:CDS
CAACTTTATTTAATGTAGTC+GGG 0.446242 7:-36905325 MsaT036529.1:CDS
TAGTGTTAGCTTTGCTGCCA+GGG 0.446928 7:-36905276 MsaT036529.1:CDS
CATGAAGGTTGGATGCAATC+AGG 0.447324 7:+36905623 None:intergenic
ACTCCAGGAGCCTTCTTCTC+GGG 0.447453 7:+36905086 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 7:+36907500 None:intergenic
AACTTTAACTTAGAGACAAA+AGG 0.449452 7:-36905698 MsaT036529.1:CDS
AAACAAAGTGTAGGCGAGTT+GGG 0.449838 7:-36904766 MsaT036529.1:intron
TCTCTTTCGGTCTGTGCCCT+CGG 0.451153 7:+36907234 None:intergenic
AGATATAGGAAGTGTATATC+TGG 0.451186 7:-36907334 MsaT036529.1:CDS
GTGGGCTCTGCCATAAGCTC+AGG 0.451356 7:+36905509 None:intergenic
TTGGAGGACTTGACGAGAGT+TGG 0.460790 7:+36905719 None:intergenic
CCGAGGTCTCACAAGGGTTA+GGG 0.464576 7:-36904741 MsaT036529.1:CDS
GGACATTGATCGGGCATTTG+TGG 0.467749 7:+36905490 None:intergenic
TGTCTCTAAGTTAAAGTTGG+AGG 0.468100 7:+36905703 None:intergenic
TCTCTCACCAACACATTCTC+GGG 0.468728 7:+36905797 None:intergenic
CGATTCGCCGAACCTTTGAA+TGG 0.471756 7:+36905350 None:intergenic
TAGAACTCCATTCAAAGGTT+CGG 0.480418 7:-36905357 MsaT036529.1:CDS
GCTGTAGACTGGTGGACATT+TGG 0.481133 7:-36905407 MsaT036529.1:CDS
TCAGGCTTAATTACGCAAGT+TGG 0.482161 7:+36905641 None:intergenic
AGGAAGACGAGCATCTGTAG+AGG 0.482255 7:-36907528 MsaT036529.1:CDS
ACAAGGCAAATGATGTAAGA+TGG 0.483739 7:-36907437 MsaT036529.1:CDS
CCCTAACCCTTGTGAGACCT+CGG 0.484530 7:+36904741 None:intergenic
AAGGGTTAGGGAAAACTTCA+AGG 0.484827 7:-36904729 MsaT036529.1:CDS
GCACTCAGGCAAAGACAACC+TGG 0.489705 7:-36907102 MsaT036529.1:CDS
GTCGATAAGTCAATTGAAAG+TGG 0.491282 7:-36907576 MsaT036529.1:CDS
TCCTCCAGAAGTGCCGAGAC+AGG 0.492920 7:-36905129 MsaT036529.1:CDS
GCATACTGGGTTCATCAAAA+GGG 0.496604 7:-36907725 MsaT036529.1:CDS
CTTACATCATTTGCCTTGTG+AGG 0.504639 7:+36907441 None:intergenic
GTCACGGAAGTGCTGTAGAC+TGG 0.506792 7:-36905418 MsaT036529.1:CDS
AACTTAGAGACAAAAGGCTC+AGG 0.511602 7:-36905692 MsaT036529.1:CDS
AAGCGATCCGAGTTCGGGAT+GGG 0.511799 7:-36907404 MsaT036529.1:CDS
GCTGCCAGGGACTTGATTAG+GGG 0.512637 7:-36905263 MsaT036529.1:CDS
CTGGCAGCAAAGCTAACACT+AGG 0.513485 7:+36905278 None:intergenic
CAAGGCAAATGATGTAAGAT+GGG 0.513919 7:-36907436 MsaT036529.1:CDS
AAAGAACCAACTCCATCAAA+AGG 0.513981 7:+36908053 None:intergenic
TGCCAACAAAGGACATTGAT+CGG 0.514760 7:+36905480 None:intergenic
AGCACTCACACCCGAGAAGA+AGG 0.514969 7:-36905096 MsaT036529.1:CDS
GACGTCTCGGCCGCCTTTAG+GGG 0.515697 7:-36907982 MsaT036529.1:CDS
TGGAGTTGGTTCTTTACTAG+AGG 0.517628 7:-36908045 MsaT036529.1:CDS
GCCAACAAAGGACATTGATC+GGG 0.517933 7:+36905481 None:intergenic
ACATGCTTGGAATCATCTAC+AGG 0.518089 7:-36905829 MsaT036529.1:CDS
TTACCAGAAGGCTTCACTCC+AGG 0.519029 7:+36905071 None:intergenic
CGCCTTTAGGGGCATATCAA+GGG 0.519337 7:-36907971 MsaT036529.1:CDS
GCCTGTCTCGGCACTTCTGG+AGG 0.519599 7:+36905128 None:intergenic
ACACCCGAGAAGAAGGCTCC+TGG 0.521332 7:-36905089 MsaT036529.1:CDS
TTACTAATTCAGGTGAGAGC+AGG 0.524536 7:-36907548 MsaT036529.1:CDS
GAAACAAAGTGTAGGCGAGT+TGG 0.525736 7:-36904767 MsaT036529.1:intron
GAATCTGACAATGGCATACT+GGG 0.526043 7:-36907738 MsaT036529.1:CDS
GGCCCTTGATATGCCCCTAA+AGG 0.529160 7:+36907969 None:intergenic
TTTGGTAGAACTCCATTCAA+AGG 0.530311 7:-36905362 MsaT036529.1:CDS
ACATTCAGTGATTCCAGTGT+TGG 0.532862 7:+36907605 None:intergenic
CAAGTTGGTTCGATGCAAGC+AGG 0.534931 7:+36905656 None:intergenic
AGCGATCCGAGTTCGGGATG+GGG 0.542648 7:-36907403 MsaT036529.1:CDS
ACAATCCGCCTTCGACGTCT+CGG 0.555155 7:-36907995 MsaT036529.1:CDS
GCTGCTTTCATGGCCTGTCT+CGG 0.557219 7:+36905116 None:intergenic
AAAGAAAGTTTCACCAACAC+TGG 0.557641 7:-36907618 MsaT036529.1:CDS
TAAACCCCTAATCAAGTCCC+TGG 0.558004 7:+36905259 None:intergenic
AGCATCTGTAGAGGGAGTAC+CGG 0.560916 7:-36907519 MsaT036529.1:CDS
GTGGGGATCTTCATGCACTC+AGG 0.561242 7:-36907116 MsaT036529.1:CDS
GGAAGACGAGCATCTGTAGA+GGG 0.562681 7:-36907527 MsaT036529.1:CDS
TTGTTGAAGAAATTGGGATG+TGG 0.562820 7:-36907357 MsaT036529.1:CDS
TCTGCCATAAGCTCAGGGAG+TGG 0.564047 7:+36905515 None:intergenic
GCGATCCGAGTTCGGGATGG+GGG 0.565198 7:-36907402 MsaT036529.1:CDS
AATGTGTTGGTGAGAGAAGA+TGG 0.570211 7:-36905791 MsaT036529.1:CDS
TGGGCTCTGCCATAAGCTCA+GGG 0.575540 7:+36905510 None:intergenic
ATCATCAAAGGCGAAGGTCA+CGG 0.575927 7:-36905434 MsaT036529.1:CDS
CAAGCGATCCGAGTTCGGGA+TGG 0.577713 7:-36907405 MsaT036529.1:CDS
TGACTATGATGATTGAAAGA+TGG 0.591253 7:+36907948 None:intergenic
TTGGGATCCGAGGTCTCACA+AGG 0.593045 7:-36904748 MsaT036529.1:CDS
CCTTGATATGCCCCTAAAGG+CGG 0.593782 7:+36907972 None:intergenic
TGGCAGCAAAGCTAACACTA+GGG 0.597836 7:+36905279 None:intergenic
CGAGTCGCAAGAAGCTTCCG+AGG 0.598026 7:-36907251 MsaT036529.1:CDS
TCAAAGTGTGTGTACAATGA+AGG 0.600623 7:+36907180 None:intergenic
GTCGACGGAATTGTGATCAG+TGG 0.601559 7:+36907767 None:intergenic
CCTGAAATCATCAAAGGCGA+AGG 0.601686 7:-36905440 MsaT036529.1:CDS
GGCGGCCGAGACGTCGAAGG+CGG 0.603064 7:+36907990 None:intergenic
AAACGTGGCGTGAAACATGA+AGG 0.606608 7:+36905608 None:intergenic
GTCAGATTCTAATATGTCGA+CGG 0.608254 7:+36907752 None:intergenic
AAAGGCGGCCGAGACGTCGA+AGG 0.609909 7:+36907987 None:intergenic
TGTAGGCGAGTTGGGATCCG+AGG 0.612353 7:-36904758 MsaT036529.1:intron
CATCGTCTTGCGTACAGACG+CGG 0.616507 7:-36905218 MsaT036529.1:CDS
CACTCAGGCAAAGACAACCT+GGG 0.620589 7:-36907101 MsaT036529.1:CDS
TCTTTCAATCATCATAGTCA+AGG 0.624801 7:-36907945 MsaT036529.1:CDS
GTGGCGTGAAACATGAAGGT+TGG 0.625753 7:+36905612 None:intergenic
GTAGAATATAAACTATTCTG+TGG 0.627294 7:+36907660 None:intergenic
TTGGCGCCTGAAATCATCAA+AGG 0.627712 7:-36905446 MsaT036529.1:CDS
GTACTCGTGCGTGCCAACAA+AGG 0.627926 7:+36905469 None:intergenic
CCTTAAGCCCGAGAATGTGT+TGG 0.630428 7:-36905804 MsaT036529.1:CDS
AGGCGGATTGTGATCTACGC+CGG 0.638385 7:+36908007 None:intergenic
CTTGACGAGAGTTGGACTAA+CGG 0.642706 7:+36905727 None:intergenic
ACGGAAGTGCTGTAGACTGG+TGG 0.644793 7:-36905415 MsaT036529.1:CDS
TGTGCAAGTACTCCAAAGCA+AGG 0.645177 7:+36905849 None:intergenic
TTCGTTGTATAAACCTCACA+AGG 0.651162 7:-36907454 MsaT036529.1:CDS
CATGCTTGGAATCATCTACA+GGG 0.651676 7:-36905828 MsaT036529.1:CDS
CTGTACGCAAGACGATGCTG+AGG 0.652693 7:+36905224 None:intergenic
CATACTGGGTTCATCAAAAG+GGG 0.655182 7:-36907724 MsaT036529.1:CDS
AGTGCATGAAGATCCCCACC+AGG 0.666742 7:+36907120 None:intergenic
GAGTCGCAAGAAGCTTCCGA+GGG 0.667961 7:-36907250 MsaT036529.1:CDS
GGCAGCAAAGCTAACACTAG+GGG 0.675458 7:+36905280 None:intergenic
GACATATTAGAATCTGACAA+TGG 0.680541 7:-36907747 MsaT036529.1:CDS
TGGCAGAGTTAAGCAGCACA+AGG 0.681505 7:-36907314 MsaT036529.1:CDS
GATTTGCCTGATAGAAAACG+TGG 0.687571 7:+36905593 None:intergenic
CTTCTGGAGGAGTTGCACAA+CGG 0.725041 7:+36905141 None:intergenic
TGGGATCCGAGGTCTCACAA+GGG 0.762229 7:-36904747 MsaT036529.1:CDS
AAAGATGAAAGATACCTACG+AGG 0.779385 7:-36907922 MsaT036529.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 36904684 36908084 36904684 ID=MsaG036529
Chr7 mRNA 36904684 36908084 36904684 ID=MsaT036529.1;Parent=MsaG036529
Chr7 exon 36904684 36904775 36904684 ID=MsaT036529.1.exon3;Parent=MsaT036529.1
Chr7 CDS 36904684 36904775 36904684 ID=cds.MsaT036529.1;Parent=MsaT036529.1
Chr7 exon 36905075 36905892 36905075 ID=MsaT036529.1.exon2;Parent=MsaT036529.1
Chr7 CDS 36905075 36905892 36905075 ID=cds.MsaT036529.1;Parent=MsaT036529.1
Chr7 exon 36907075 36908084 36907075 ID=MsaT036529.1.exon1;Parent=MsaT036529.1
Chr7 CDS 36907075 36908084 36907075 ID=cds.MsaT036529.1;Parent=MsaT036529.1
Gene Sequence

>MsaT036529.1

ATGGAGTCACCTTTTGATGGAGTTGGTTCTTTACTAGAGGTTCAGAAATCGGTTTCCGGCGTAGATCACAATCCGCCTTCGACGTCTCGGCCGCCTTTAGGGGCATATCAAGGGCCATCTTTCAATCATCATAGTCAAGGAAAGATGAAAGATACCTACGAGGAAGCTAAAAATGTCGAGCAATATCACAACCCTAATGGTAAATCTGACTATGCAAGCAAAACCGAAACTTTTGAAAGTTGTTTGGTAAAGAACATTTCCACAATCGAAACAAAATTGTGTATCAGCGACGATTCCACTGATCACAATTCCGTCGACATATTAGAATCTGACAATGGCATACTGGGTTCATCAAAAGGGGTTATTGATCAGAAAAACTCAGAGATTACGTTTTGCTCAAGTCCACAGAATAGTTTATATTCTACCACTGACTTTTTAGAAGCCAAAGAAAGTTTCACCAACACTGGAATCACTGAATGTGTTAGTGTCGATAAGTCAATTGAAAGTGGAGAAGTTACTAATTCAGGTGAGAGCAGGAAGACGAGCATCTGTAGAGGGAGTACCGGAAGTGATGTTAGCGATGAAAGCAGCATCAGTAGCTTGAGCAGTTCGTTGTATAAACCTCACAAGGCAAATGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGTTCGGGATGGGGGATTGGAAATGAGACATTTTAGGTTGTTGAAGAAATTGGGATGTGGAGATATAGGAAGTGTATATCTGGCAGAGTTAAGCAGCACAAGGACTTGTTTTGCAATGAAAGTAATGAACAAGACTGAACTGTCGAGTCGCAAGAAGCTTCCGAGGGCACAGACCGAAAGAGAGATATTGCAGTCTCTTGATCATCCATTTTTACCTTCATTGTACACACACTTTGAGACAGAATCATTCTCTTGCTTGGTTATGGAGTTTTGTCCTGGTGGGGATCTTCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGGGACCTTAAGCCCGAGAATGTGTTGGTGAGAGAAGATGGTCACATAATGCTATCAGATTTTGATCTCTCTCTAAGATGTGCCGTTAGTCCAACTCTCGTCAAGTCCTCCAACTTTAACTTAGAGACAAAAGGCTCAGGATATTGCGCTCAGCCTGCTTGCATCGAACCAACTTGCGTAATTAAGCCTGATTGCATCCAACCTTCATGTTTCACGCCACGTTTTCTATCAGGCAAATCCAAGAAGAAAGAAAAGAAGTTGAAACCTAAAAACGACGTGCATAATCAGGTGACACCACTCCCTGAGCTTATGGCAGAGCCCACAAATGCCCGATCAATGTCCTTTGTTGGCACGCACGAGTACTTGGCGCCTGAAATCATCAAAGGCGAAGGTCACGGAAGTGCTGTAGACTGGTGGACATTTGGTATATTCTTATACGAGCTTTTGTTTGGTAGAACTCCATTCAAAGGTTCGGCGAATCGGGCAACTTTATTTAATGTAGTCGGGCAGCCCTTAAGATTTCCAGAATCCCCTAGTGTTAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTACTTGTGAAAGAACCTCAGCATCGTCTTGCGTACAGACGCGGAGCCACAGAGATAAAACAACATCCATTCTTTCAAAATATTAATTGGGCACTGATCCGTTGTGCAACTCCTCCAGAAGTGCCGAGACAGGCCATGAAAGCAGCACTCACACCCGAGAAGAAGGCTCCTGGAGTGAAGCCTTCTGGCGAGTTGGGATCCGAGGTCTCACAAGGGTTAGGGAAAACTTCAAGGTTCAGAGAGCGTGAAATGCGCATAAAACTGCCCTATTGTGCATAA

Protein sequence

>MsaT036529.1

MESPFDGVGSLLEVQKSVSGVDHNPPSTSRPPLGAYQGPSFNHHSQGKMKDTYEEAKNVEQYHNPNGKSDYASKTETFESCLVKNISTIETKLCISDDSTDHNSVDILESDNGILGSSKGVIDQKNSEITFCSSPQNSLYSTTDFLEAKESFTNTGITECVSVDKSIESGEVTNSGESRKTSICRGSTGSDVSDESSISSLSSSLYKPHKANDVRWEAIQAIRVRDGGLEMRHFRLLKKLGCGDIGSVYLAELSSTRTCFAMKVMNKTELSSRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNFNLETKGSGYCAQPACIEPTCVIKPDCIQPSCFTPRFLSGKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKAALTPEKKAPGVKPSGELGSEVSQGLGKTSRFREREMRIKLPYCA*