AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG036561

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036561 MtrunA17_Chr6g0449401 84.179 670 36 6 1 603 13 679 0.0 1110
MsaG036561 MtrunA17_Chr7g0227331 64.743 641 165 15 1 603 1 618 0.0 762
MsaG036561 MtrunA17_Chr2g0290691 70.299 468 112 6 159 603 141 604 0.0 679
MsaG036561 MtrunA17_Chr7g0250631 65.208 457 133 6 168 603 310 761 0.0 612
MsaG036561 MtrunA17_Chr8g0335351 71.463 410 109 5 168 574 316 720 0.0 600
MsaG036561 MtrunA17_Chr1g0179101 64.899 396 128 5 184 575 433 821 0.0 535
MsaG036561 MtrunA17_Chr7g0266031 62.559 422 145 6 159 575 430 843 0.0 535
MsaG036561 MtrunA17_Chr2g0309421 49.909 551 241 11 79 603 30 571 5.70e-175 508
MsaG036561 MtrunA17_Chr3g0080101 61.461 397 139 5 187 576 380 769 7.30e-175 516
MsaG036561 MtrunA17_Chr8g0356291 63.520 392 130 7 190 575 94 478 2.76e-172 499
MsaG036561 MtrunA17_Chr4g0063311 51.253 439 176 9 193 603 62 490 3.01e-144 427
MsaG036561 MtrunA17_Chr2g0321101 52.062 388 147 8 201 568 66 434 4.34e-126 379
MsaG036561 MtrunA17_Chr8g0381091 48.883 403 168 10 197 584 52 431 4.61e-120 363
MsaG036561 MtrunA17_Chr2g0285711 45.657 449 201 10 172 603 32 454 5.03e-120 363
MsaG036561 MtrunA17_Chr2g0312641 42.721 419 194 11 170 574 33 419 5.90e-111 340
MsaG036561 MtrunA17_Chr4g0030361 45.692 383 158 5 197 579 282 614 4.65e-109 341
MsaG036561 MtrunA17_Chr2g0327561 44.472 407 187 3 197 603 601 968 7.94e-108 346
MsaG036561 MtrunA17_Chr8g0369091 45.550 382 161 3 197 578 572 906 7.50e-107 343
MsaG036561 MtrunA17_Chr8g0338741 38.329 407 184 15 219 599 15 380 4.65e-77 251
MsaG036561 MtrunA17_Chr2g0329011 36.709 395 190 11 219 603 12 356 5.06e-72 236
MsaG036561 MtrunA17_Chr4g0032761 36.979 384 191 11 219 575 10 369 6.59e-71 234
MsaG036561 MtrunA17_Chr7g0234641 34.293 382 215 9 219 591 8 362 3.23e-65 219
MsaG036561 MtrunA17_Chr4g0018201 35.465 344 174 8 221 563 756 1052 7.03e-55 201
MsaG036561 MtrunA17_Chr5g0428981 35.174 344 175 8 221 563 760 1056 9.15e-55 201
MsaG036561 MtrunA17_Chr6g0478601 33.989 356 188 8 221 575 108 417 4.45e-54 192
MsaG036561 MtrunA17_Chr3g0135951 32.514 366 210 11 203 563 73 406 4.06e-49 178
MsaG036561 MtrunA17_Chr1g0153321 30.194 361 210 8 210 566 94 416 2.33e-47 174
MsaG036561 MtrunA17_Chr2g0299781 29.676 401 240 11 203 601 92 452 2.00e-46 171
MsaG036561 MtrunA17_Chr1g0187581 31.200 375 206 11 213 574 100 435 9.67e-46 169
MsaG036561 MtrunA17_Chr1g0167351 31.006 358 202 10 224 574 110 429 3.17e-44 165
MsaG036561 MtrunA17_Chr1g0183651 30.163 368 214 9 212 574 108 437 3.20e-44 166
MsaG036561 MtrunA17_Chr1g0167311 31.373 357 202 12 224 576 115 432 2.14e-43 162
MsaG036561 MtrunA17_Chr7g0261491 27.368 475 269 14 110 574 33 441 1.95e-42 161
MsaG036561 MtrunA17_Chr7g0245031 37.748 151 92 1 221 371 145 293 1.03e-25 110
MsaG036561 MtrunA17_Chr7g0245031 37.324 142 83 3 423 563 273 409 3.62e-19 90.9
MsaG036561 MtrunA17_Chr4g0059751 36.306 157 87 3 224 371 89 241 9.23e-25 107
MsaG036561 MtrunA17_Chr4g0059751 36.364 110 67 2 460 568 255 362 2.54e-19 90.9
MsaG036561 MtrunA17_Chr1g0197721 37.736 159 95 3 211 368 38 193 2.71e-24 106
MsaG036561 MtrunA17_Chr2g0286501 26.036 338 169 8 221 558 46 302 3.00e-21 99.0
MsaG036561 MtrunA17_Chr3g0140631 36.242 149 93 1 224 372 37 183 1.52e-20 92.4
MsaG036561 MtrunA17_Chr3g0140631 36.364 99 59 1 460 558 194 288 8.16e-15 75.5
MsaG036561 MtrunA17_Chr8g0351491 28.685 251 170 5 213 458 5 251 2.90e-20 91.3
MsaG036561 MtrunA17_Chr8g0351491 41.414 99 54 1 460 558 173 267 2.36e-16 79.7
MsaG036561 MtrunA17_Chr3g0125381 44.444 99 51 1 460 558 112 206 4.95e-20 89.0
MsaG036561 MtrunA17_Chr3g0125381 28.814 177 112 5 274 440 2 174 3.38e-11 63.5
MsaG036561 MtrunA17_Chr6g0453681 24.484 339 174 9 221 559 16 272 1.13e-17 86.3
MsaG036561 MtrunA17_Chr6g0468751 24.556 338 173 9 221 558 16 271 1.42e-17 86.3
MsaG036561 MtrunA17_Chr3g0132671 23.881 402 182 13 221 592 16 323 1.61e-17 85.9
MsaG036561 MtrunA17_Chr8g0353621 31.285 179 116 2 224 397 10 186 3.40e-17 82.0
MsaG036561 MtrunA17_Chr8g0353621 41.414 99 54 1 460 558 167 261 6.17e-16 78.6
MsaG036561 MtrunA17_Chr3g0114511 32.484 157 99 2 216 371 24 174 3.96e-17 84.3
MsaG036561 MtrunA17_Chr1g0205421 32.704 159 100 3 215 371 3 156 1.21e-16 82.8
MsaG036561 MtrunA17_Chr2g0321841 28.571 154 104 3 221 371 1 151 2.32e-16 83.2
MsaG036561 MtrunA17_Chr3g0107051 35.135 148 93 2 224 371 21 165 2.55e-16 81.6
MsaG036561 MtrunA17_Chr4g0013131 30.573 157 106 2 215 371 3 156 2.61e-16 82.0
MsaG036561 MtrunA17_Chr4g0025671 27.742 155 106 3 220 371 4 155 5.15e-16 82.0
MsaG036561 MtrunA17_Chr1g0190831 27.742 155 104 3 221 371 1 151 5.88e-16 81.3
MsaG036561 MtrunA17_Chr8g0379091 32.680 153 100 2 219 371 21 170 9.20e-16 80.5
MsaG036561 MtrunA17_Chr7g0244521 24.638 345 176 12 216 558 4 266 1.09e-15 80.1
MsaG036561 MtrunA17_Chr1g0188031 32.692 156 89 4 224 371 20 167 1.19e-15 79.7
MsaG036561 MtrunA17_Chr3g0107011 29.801 151 103 1 221 371 11 158 1.94e-15 79.3
MsaG036561 MtrunA17_Chr2g0284031 31.373 153 102 1 219 371 26 175 2.14e-15 79.3
MsaG036561 MtrunA17_Chr5g0432491 34.459 148 95 2 224 371 23 168 2.49e-15 78.6
MsaG036561 MtrunA17_Chr2g0302431 30.247 162 111 2 210 371 6 165 2.69e-15 78.6
MsaG036561 MtrunA17_Chr1g0173921 27.922 154 105 3 221 371 1 151 5.37e-15 79.0
MsaG036561 MtrunA17_Chr7g0274941 30.323 155 103 3 216 368 8 159 1.49e-14 74.7
MsaG036561 MtrunA17_Chr8g0346071 23.714 350 179 13 210 558 8 270 1.79e-14 75.9
MsaG036561 MtrunA17_Chr7g0258051 25.478 157 111 3 220 373 12 165 2.46e-14 76.3
MsaG036561 MtrunA17_Chr1g0185221 27.273 154 106 3 221 371 1 151 2.91e-14 75.9
MsaG036561 MtrunA17_Chr1g0200601 32.468 154 98 4 223 372 29 180 2.99e-14 75.5
MsaG036561 MtrunA17_Chr5g0428031 29.730 148 102 2 224 371 9 154 3.47e-14 75.1
MsaG036561 MtrunA17_Chr3g0132591 35.172 145 84 3 230 373 118 253 3.48e-14 75.1
MsaG036561 MtrunA17_Chr8g0385341 33.333 153 96 4 224 372 30 180 3.84e-14 75.1
MsaG036561 MtrunA17_Chr4g0074111 23.741 278 134 7 224 499 18 219 3.97e-14 74.7
MsaG036561 MtrunA17_Chr7g0260191 26.623 154 107 3 221 371 1 151 4.07e-14 75.5
MsaG036561 MtrunA17_Chr4g0063881 30.405 148 101 1 224 371 11 156 6.63e-14 74.3
MsaG036561 MtrunA17_Chr5g0432471 27.152 151 107 2 221 371 9 156 6.67e-14 74.3
MsaG036561 MtrunA17_Chr5g0419441 28.289 152 106 2 224 375 239 387 7.06e-14 75.1
MsaG036561 MtrunA17_Chr1g0202831 25.532 235 148 5 212 424 399 628 8.12e-14 75.1
MsaG036561 MtrunA17_Chr2g0284011 32.278 158 100 4 216 371 4 156 9.24e-14 73.9
MsaG036561 MtrunA17_Chr7g0272841 29.630 189 116 6 224 404 68 247 1.46e-13 73.9
MsaG036561 MtrunA17_Chr1g0170551 30.508 118 76 2 445 562 150 261 1.47e-13 74.3
MsaG036561 MtrunA17_Chr1g0170551 28.313 166 115 3 218 383 1 162 1.47e-11 67.8
MsaG036561 MtrunA17_Chr3g0091311 30.128 156 106 2 216 371 4 156 2.48e-13 70.5
MsaG036561 MtrunA17_Chr6g0486661 36.364 121 67 5 460 574 918 1034 2.53e-13 73.6
MsaG036561 MtrunA17_Chr2g0317001 27.632 152 106 2 224 375 15 162 3.09e-13 72.8
MsaG036561 MtrunA17_Chr7g0256001 29.891 184 114 6 223 399 140 315 4.76e-13 72.0
MsaG036561 MtrunA17_Chr4g0001331 29.730 148 101 2 224 371 20 164 7.65e-13 70.9
MsaG036561 MtrunA17_Chr2g0304111 28.931 159 106 3 213 371 17 168 9.80e-13 70.5
MsaG036561 MtrunA17_Chr1g0205931 28.070 228 148 8 204 421 36 257 1.79e-12 70.5
MsaG036561 MtrunA17_Chr5g0409421 29.189 185 117 5 221 404 1 172 1.95e-12 69.7
MsaG036561 MtrunA17_Chr1g0176421 29.775 178 116 5 224 399 161 331 2.12e-12 70.1
MsaG036561 MtrunA17_Chr1g0203881 32.432 148 94 3 228 371 45 190 2.14e-12 69.7
MsaG036561 MtrunA17_Chr5g0448721 27.869 183 123 5 224 404 96 271 2.21e-12 69.7
MsaG036561 MtrunA17_Chr5g0441011 30.667 150 98 4 224 371 13 158 2.28e-12 69.3
MsaG036561 MtrunA17_Chr8g0345801 33.588 131 80 4 229 357 20 145 2.73e-12 67.4
MsaG036561 MtrunA17_Chr1g0173541 32.051 156 100 4 221 372 49 202 4.01e-12 68.9
MsaG036561 MtrunA17_Chr8g0374701 29.697 165 102 5 239 399 148 302 4.25e-12 68.9
MsaG036561 MtrunA17_Chr1g0170281 30.357 168 111 4 209 372 103 268 4.44e-12 68.9
MsaG036561 MtrunA17_Chr2g0317501 32.164 171 107 6 206 371 114 280 4.60e-12 68.9
MsaG036561 MtrunA17_Chr1g0166101 30.323 155 93 3 224 371 24 170 4.79e-12 68.2
MsaG036561 MtrunA17_Chr1g0150321 32.394 142 93 2 230 371 19 157 5.39e-12 68.2
MsaG036561 MtrunA17_Chr5g0441691 29.444 180 114 5 224 399 68 238 7.39e-12 68.2
MsaG036561 MtrunA17_Chr4g0008561 34.314 102 61 3 460 559 180 277 7.62e-12 68.6
MsaG036561 MtrunA17_Chr3g0091281 25.175 286 133 9 216 498 4 211 1.24e-11 65.1
MsaG036561 MtrunA17_Chr8g0346081 26.163 172 120 3 213 384 11 175 1.59e-11 66.6
MsaG036561 MtrunA17_Chr4g0074811 32.258 155 99 5 222 372 89 241 1.80e-11 67.0
MsaG036561 MtrunA17_Chr3g0130151 27.933 179 118 4 228 404 248 417 1.92e-11 67.0
MsaG036561 MtrunA17_Chr5g0405421 26.230 183 122 5 222 399 97 271 1.93e-11 67.0
MsaG036561 MtrunA17_Chr0c02g0489761 29.444 180 114 5 224 399 78 248 2.28e-11 66.6
MsaG036561 MtrunA17_Chr5g0444171 30.719 153 100 5 224 372 92 242 3.05e-11 66.2
MsaG036561 MtrunA17_Chr4g0045261 29.412 153 96 4 251 399 167 311 3.38e-11 66.2
MsaG036561 MtrunA17_Chr4g0047191 29.508 122 84 1 252 371 73 194 5.65e-11 64.7
MsaG036561 MtrunA17_Chr7g0257751 31.373 153 99 4 224 372 58 208 6.05e-11 65.1
MsaG036561 MtrunA17_Chr4g0047211 29.508 122 84 1 252 371 68 189 6.93e-11 64.3
MsaG036561 MtrunA17_Chr3g0098951 29.630 162 107 5 216 372 75 234 9.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036561 AT5G47750.1 71.957 460 97 8 168 603 135 586 0.0 670
MsaG036561 AT4G26610.1 71.744 453 115 6 159 603 59 506 0.0 659
MsaG036561 AT5G55910.2 71.554 457 112 6 161 603 46 498 0.0 655
MsaG036561 AT5G55910.1 71.554 457 112 6 161 603 46 498 0.0 655
MsaG036561 AT3G27580.2 65.392 497 134 8 132 603 95 578 0.0 627
MsaG036561 AT3G27580.1 65.392 497 134 8 132 603 95 578 0.0 627
MsaG036561 AT2G44830.2 67.139 423 123 8 168 582 307 721 0.0 579
MsaG036561 AT2G44830.3 67.139 423 123 8 168 582 307 721 0.0 579
MsaG036561 AT2G44830.1 67.139 423 123 8 168 582 307 721 0.0 579
MsaG036561 AT5G40030.1 61.412 425 135 8 197 603 86 499 0.0 534
MsaG036561 AT1G79250.1 65.116 387 125 4 197 578 119 500 9.01e-180 520
MsaG036561 AT1G79250.3 65.116 387 125 4 197 578 119 500 9.01e-180 520
MsaG036561 AT1G79250.2 65.116 387 125 4 197 578 119 500 9.01e-180 520
MsaG036561 AT1G79250.4 65.116 387 125 4 197 578 119 500 9.01e-180 520
MsaG036561 AT3G52890.2 51.977 531 221 9 94 603 417 934 2.24e-177 527
MsaG036561 AT3G52890.4 51.977 531 221 9 94 603 417 934 2.24e-177 527
MsaG036561 AT3G52890.1 51.977 531 221 9 94 603 417 934 2.24e-177 527
MsaG036561 AT3G52890.3 51.977 531 221 9 94 603 417 934 2.24e-177 527
MsaG036561 AT3G12690.1 61.042 403 147 4 180 582 141 533 2.45e-176 512
MsaG036561 AT3G12690.3 61.042 403 147 4 180 582 141 533 2.45e-176 512
MsaG036561 AT3G12690.2 61.042 403 147 4 180 582 141 533 2.45e-176 512
MsaG036561 AT1G16440.1 59.953 427 138 8 197 603 86 499 1.89e-174 504
MsaG036561 AT5G03640.2 59.145 421 152 7 197 603 512 926 1.14e-173 517
MsaG036561 AT5G03640.1 59.145 421 152 7 197 603 512 926 1.14e-173 517
MsaG036561 AT2G36350.1 57.683 423 158 6 197 603 532 949 4.13e-168 503
MsaG036561 AT2G26700.1 43.836 511 219 11 137 597 7 499 1.51e-132 398
MsaG036561 AT3G44610.1 53.804 368 132 9 224 568 71 423 1.10e-125 378
MsaG036561 AT2G34650.1 48.675 415 179 10 197 603 50 438 3.45e-125 376
MsaG036561 AT5G58140.6 43.932 412 178 6 198 603 551 915 7.28e-109 348
MsaG036561 AT5G58140.7 43.932 412 178 6 198 603 551 915 7.28e-109 348
MsaG036561 AT5G58140.5 43.932 412 178 6 198 603 551 915 7.28e-109 348
MsaG036561 AT5G58140.2 43.932 412 178 6 198 603 551 915 7.28e-109 348
MsaG036561 AT5G58140.1 43.932 412 178 6 198 603 551 915 7.28e-109 348
MsaG036561 AT5G58140.3 46.486 370 151 4 198 567 551 873 3.80e-106 340
MsaG036561 AT3G14370.1 42.785 395 184 7 199 584 61 422 1.56e-105 327
MsaG036561 AT3G45780.2 45.812 382 162 5 197 578 636 972 1.27e-98 323
MsaG036561 AT3G45780.1 45.812 382 162 5 197 578 636 972 1.27e-98 323
MsaG036561 AT1G53700.1 41.397 401 189 9 199 589 66 430 9.32e-97 304
MsaG036561 AT1G51170.1 37.234 376 183 12 219 575 17 358 9.35e-69 229
MsaG036561 AT3G20830.1 38.482 369 192 10 218 575 15 359 2.34e-68 228
MsaG036561 AT3G25250.1 33.967 368 204 9 219 577 12 349 9.60e-64 216
MsaG036561 AT4G13000.1 33.967 368 194 10 219 577 15 342 2.05e-63 213
MsaG036561 AT1G45160.2 32.663 398 201 8 219 599 665 1012 1.33e-51 192
MsaG036561 AT1G45160.1 33.611 360 188 6 219 577 665 974 2.37e-51 191
MsaG036561 AT5G62310.1 33.718 347 177 9 221 563 751 1048 3.43e-51 191
MsaG036561 AT3G17850.1 33.721 344 181 8 221 563 879 1176 2.86e-49 185
MsaG036561 AT1G48490.4 32.948 346 179 8 219 563 824 1117 3.65e-49 185
MsaG036561 AT1G48490.3 32.948 346 179 8 219 563 823 1116 4.16e-49 184
MsaG036561 AT1G48490.2 32.948 346 179 8 219 563 823 1116 4.16e-49 184
MsaG036561 AT1G48490.1 32.948 346 179 8 219 563 823 1116 4.16e-49 184
MsaG036561 AT1G30640.3 29.459 370 226 10 209 576 12 348 9.59e-48 174
MsaG036561 AT4G33080.2 30.446 381 224 11 203 574 73 421 1.03e-47 175
MsaG036561 AT4G33080.1 30.446 381 224 11 203 574 73 421 1.11e-47 175
MsaG036561 AT5G09890.2 31.977 344 194 9 224 563 102 409 1.63e-47 174
MsaG036561 AT5G09890.1 31.977 344 194 9 224 563 102 409 1.88e-47 174
MsaG036561 AT1G30640.2 29.459 370 226 10 209 576 105 441 1.90e-47 175
MsaG036561 AT1G30640.1 29.459 370 226 10 209 576 105 441 1.90e-47 175
MsaG036561 AT3G23310.1 30.411 365 213 10 203 563 99 426 1.12e-43 164
MsaG036561 AT2G20470.3 30.163 368 212 9 212 575 112 438 1.23e-43 164
MsaG036561 AT4G14350.2 28.401 419 237 12 152 564 63 424 1.87e-43 164
MsaG036561 AT4G14350.1 28.401 419 237 12 152 564 63 424 1.87e-43 164
MsaG036561 AT4G14350.4 28.401 419 237 12 152 564 63 424 1.87e-43 164
MsaG036561 AT2G20470.2 30.163 368 212 9 212 575 112 438 2.54e-43 164
MsaG036561 AT2G20470.1 30.163 368 212 9 212 575 112 438 2.54e-43 164
MsaG036561 AT4G14350.3 28.401 419 237 12 152 564 63 424 2.81e-43 163
MsaG036561 AT1G03920.2 31.285 358 199 10 224 574 24 341 8.77e-43 160
MsaG036561 AT1G03920.1 29.540 413 234 12 169 574 92 454 1.05e-42 162
MsaG036561 AT1G03920.3 29.540 413 234 12 169 574 92 454 1.05e-42 162
MsaG036561 AT2G19400.1 28.962 366 225 10 203 563 84 419 3.56e-40 154
MsaG036561 AT5G58140.4 48.855 131 67 0 198 328 551 681 5.01e-34 138
MsaG036561 AT3G08720.1 37.419 155 95 1 217 371 133 285 1.10e-26 114
MsaG036561 AT3G08720.1 45.714 105 53 3 460 563 299 400 1.86e-22 101
MsaG036561 AT3G08720.3 37.419 155 95 1 217 371 133 285 1.10e-26 114
MsaG036561 AT3G08720.3 45.714 105 53 3 460 563 299 400 1.86e-22 101
MsaG036561 AT3G08720.4 37.419 155 95 1 217 371 133 285 1.10e-26 114
MsaG036561 AT3G08720.4 45.714 105 53 3 460 563 299 400 1.86e-22 101
MsaG036561 AT3G08720.2 37.419 155 95 1 217 371 133 285 1.10e-26 114
MsaG036561 AT3G08720.2 45.714 105 53 3 460 563 299 400 1.86e-22 101
MsaG036561 AT3G08730.1 34.021 194 107 3 178 371 107 279 8.78e-26 111
MsaG036561 AT3G08730.1 39.583 144 76 5 423 563 259 394 7.15e-23 102
MsaG036561 AT3G08730.2 34.021 194 107 3 178 371 107 279 8.78e-26 111
MsaG036561 AT3G08730.2 39.583 144 76 5 423 563 259 394 7.15e-23 102
MsaG036561 AT5G04510.3 39.310 145 86 2 224 368 44 186 5.22e-24 103
MsaG036561 AT5G04510.2 39.310 145 86 2 224 368 44 186 7.14e-24 104
MsaG036561 AT5G04510.2 34.028 144 85 5 436 577 196 331 7.27e-16 80.5
MsaG036561 AT5G04510.1 39.310 145 86 2 224 368 44 186 8.12e-24 105
MsaG036561 AT5G04510.1 34.028 144 85 5 436 577 196 331 5.92e-16 81.3
MsaG036561 AT3G10540.1 36.076 158 99 2 211 368 32 187 2.14e-22 101
MsaG036561 AT3G10540.1 31.056 161 101 5 436 594 197 349 2.04e-15 79.7
MsaG036561 AT5G18700.1 35.503 169 98 4 221 386 1 161 1.54e-20 97.1
MsaG036561 AT2G45490.2 28.696 230 155 5 216 439 14 240 3.43e-19 88.2
MsaG036561 AT2G45490.2 42.105 76 44 0 460 535 179 254 1.37e-12 68.6
MsaG036561 AT2G45490.1 28.696 230 155 5 216 439 14 240 3.80e-19 88.6
MsaG036561 AT2G45490.1 39.130 115 59 2 460 574 179 282 3.41e-18 85.9
MsaG036561 AT2G25090.1 25.816 337 175 11 224 558 15 278 9.78e-19 89.7
MsaG036561 AT3G01090.3 24.332 337 173 9 223 559 18 272 1.90e-18 89.4
MsaG036561 AT3G01090.1 24.332 337 173 9 223 559 18 272 1.90e-18 89.4
MsaG036561 AT4G32830.1 35.570 149 94 1 224 372 31 177 2.02e-18 86.7
MsaG036561 AT4G32830.1 34.188 117 66 2 460 576 188 293 7.22e-15 76.3
MsaG036561 AT5G25110.1 24.786 351 176 10 220 562 32 302 2.06e-18 89.0
MsaG036561 AT2G25880.1 33.735 166 108 1 207 372 8 171 2.16e-18 86.3
MsaG036561 AT2G25880.1 39.394 99 56 1 460 558 182 276 1.55e-15 77.8
MsaG036561 AT3G01090.2 24.332 337 173 9 223 559 41 295 2.37e-18 89.0
MsaG036561 AT2G25880.4 33.735 166 108 1 207 372 21 184 2.86e-18 86.3
MsaG036561 AT2G25880.4 39.394 99 56 1 460 558 195 289 1.77e-15 78.2
MsaG036561 AT2G25880.3 33.735 166 108 1 207 372 69 232 5.88e-18 86.3
MsaG036561 AT2G25880.3 39.796 98 55 1 460 557 243 336 5.19e-15 77.4
MsaG036561 AT1G12680.1 33.548 155 91 5 228 380 111 255 3.48e-17 85.1
MsaG036561 AT5G45820.1 31.210 157 105 2 215 371 3 156 1.17e-16 83.2
MsaG036561 AT2G20050.1 39.091 110 61 3 460 566 940 1046 2.10e-16 84.0
MsaG036561 AT2G20050.2 39.091 110 61 3 460 566 937 1043 2.21e-16 83.6
MsaG036561 AT3G29160.3 23.442 337 176 9 223 559 19 273 2.44e-16 81.3
MsaG036561 AT3G29160.1 23.442 337 176 9 223 559 19 273 5.48e-16 81.6
MsaG036561 AT3G29160.2 23.442 337 176 9 223 559 19 273 5.48e-16 81.6
MsaG036561 AT5G28290.3 29.221 154 103 3 221 371 1 151 5.95e-16 81.6
MsaG036561 AT5G28290.1 29.221 154 103 3 221 371 1 151 6.28e-16 81.6
MsaG036561 AT5G28290.2 29.221 154 103 3 221 371 1 151 6.28e-16 81.6
MsaG036561 AT5G57630.2 25.263 285 130 7 217 498 5 209 8.53e-16 80.1
MsaG036561 AT2G25880.2 39.394 99 56 1 460 558 150 244 1.06e-15 77.8
MsaG036561 AT5G57630.1 25.263 285 130 7 217 498 5 209 1.12e-15 80.1
MsaG036561 AT3G04810.2 27.922 154 105 3 221 371 1 151 1.32e-15 80.5
MsaG036561 AT3G04810.1 27.922 154 105 3 221 371 1 151 1.32e-15 80.5
MsaG036561 AT3G04810.3 27.922 154 105 3 221 371 1 151 1.32e-15 80.5
MsaG036561 AT3G44200.2 27.273 154 106 3 221 371 5 155 1.70e-15 80.9
MsaG036561 AT3G44200.1 27.273 154 106 3 221 371 5 155 1.70e-15 80.9
MsaG036561 AT2G30360.1 34.899 149 94 3 224 371 21 167 2.37e-15 79.0
MsaG036561 AT3G17510.1 32.704 159 104 3 213 371 10 165 2.50e-15 79.0
MsaG036561 AT4G18700.1 31.373 153 102 1 219 371 21 170 2.74e-15 79.3
MsaG036561 AT1G54510.4 27.273 154 106 3 221 371 1 151 3.49e-15 79.3
MsaG036561 AT1G54510.2 27.273 154 106 3 221 371 1 151 3.49e-15 79.3
MsaG036561 AT1G54510.1 27.273 154 106 3 221 371 1 151 3.49e-15 79.3
MsaG036561 AT1G54510.3 27.273 154 106 3 221 371 1 151 3.49e-15 79.3
MsaG036561 AT4G24400.1 29.193 161 112 2 224 384 9 167 3.89e-15 78.6
MsaG036561 AT3G63280.4 27.389 157 108 3 218 371 52 205 3.92e-15 79.3
MsaG036561 AT2G38490.1 38.095 147 82 4 228 371 32 172 4.18e-15 78.2
MsaG036561 AT1G35670.1 32.468 154 98 4 223 372 25 176 4.27e-15 78.6
MsaG036561 AT4G24400.2 29.193 161 112 2 224 384 9 167 4.52e-15 78.2
MsaG036561 AT3G63280.2 27.922 154 105 3 221 371 1 151 5.00e-15 78.6
MsaG036561 AT3G63280.3 27.922 154 105 3 221 371 1 151 5.00e-15 78.6
MsaG036561 AT3G63280.1 27.922 154 105 3 221 371 1 151 5.00e-15 78.6
MsaG036561 AT5G10930.1 35.417 144 87 4 230 371 18 157 5.03e-15 78.2
MsaG036561 AT5G45810.1 30.065 153 104 1 219 371 23 172 5.78e-15 78.2
MsaG036561 AT4G14580.1 24.545 330 171 11 217 544 14 267 8.55e-15 77.4
MsaG036561 AT5G01810.3 33.333 159 99 4 215 371 3 156 2.20e-14 75.5
MsaG036561 AT3G20860.1 24.503 151 113 1 221 371 1 150 2.22e-14 75.9
MsaG036561 AT1G69220.1 29.677 155 100 3 224 375 249 397 2.44e-14 77.0
MsaG036561 AT2G34180.1 32.099 162 103 4 213 372 46 202 2.57e-14 76.3
MsaG036561 AT5G01810.1 33.333 159 99 4 215 371 3 156 2.59e-14 75.9
MsaG036561 AT5G01810.2 33.333 159 99 4 215 371 3 156 2.59e-14 75.9
MsaG036561 AT4G09570.1 32.468 154 98 4 223 372 24 175 4.65e-14 75.5
MsaG036561 AT1G29230.1 30.065 153 100 2 221 371 71 218 5.03e-14 75.5
MsaG036561 AT5G21326.1 32.667 150 95 4 224 371 13 158 9.28e-14 74.3
MsaG036561 AT5G39440.1 33.557 149 97 2 223 371 18 164 1.25e-13 73.9
MsaG036561 AT5G39440.1 37.624 101 57 3 460 560 178 272 8.16e-11 65.1
MsaG036561 AT3G06030.1 28.155 206 125 6 205 404 59 247 1.40e-13 74.3
MsaG036561 AT3G10660.2 27.308 260 159 9 150 399 117 356 1.85e-13 73.9
MsaG036561 AT3G10660.1 27.308 260 159 9 150 399 117 356 1.85e-13 73.9
MsaG036561 AT1G54960.1 31.325 166 95 6 212 371 66 218 2.14e-13 73.6
MsaG036561 AT1G54960.2 31.325 166 95 6 212 371 66 218 2.14e-13 73.6
MsaG036561 AT2G26980.2 29.878 164 104 5 210 371 5 159 3.04e-13 70.9
MsaG036561 AT2G17890.1 29.834 181 114 5 224 399 108 280 3.52e-13 72.8
MsaG036561 AT2G26980.1 29.878 164 104 5 210 371 5 159 4.67e-13 71.6
MsaG036561 AT2G26980.3 29.878 164 104 5 210 371 5 159 4.70e-13 72.0
MsaG036561 AT5G35410.2 28.571 154 108 2 218 371 5 156 4.94e-13 71.6
MsaG036561 AT5G01820.1 35.220 159 95 5 215 371 14 166 5.02e-13 72.0
MsaG036561 AT2G26980.4 29.878 164 104 5 210 371 15 169 5.05e-13 72.0
MsaG036561 AT1G53570.7 27.419 186 124 3 228 411 218 394 5.38e-13 72.0
MsaG036561 AT1G53570.6 27.419 186 124 3 228 411 218 394 5.76e-13 72.0
MsaG036561 AT1G53570.2 27.419 186 124 3 228 411 218 394 7.50e-13 72.0
MsaG036561 AT1G53570.3 27.419 186 124 3 228 411 218 394 7.50e-13 72.0
MsaG036561 AT1G53570.4 27.419 186 124 3 228 411 218 394 7.56e-13 72.0
MsaG036561 AT1G53570.1 27.419 186 124 3 228 411 218 394 7.84e-13 72.0
MsaG036561 AT2G26980.5 29.878 164 104 5 210 371 5 159 8.18e-13 71.2
MsaG036561 AT1G50700.3 33.333 153 96 4 224 372 73 223 9.18e-13 71.2
MsaG036561 AT1G09000.1 29.255 188 118 7 224 404 69 248 1.05e-12 71.6
MsaG036561 AT1G09000.2 29.255 188 118 7 224 404 69 248 1.08e-12 71.2
MsaG036561 AT5G35410.1 28.571 154 108 2 218 371 5 156 1.18e-12 70.9
MsaG036561 AT1G50700.1 33.333 153 96 4 224 372 73 223 1.31e-12 70.9
MsaG036561 AT4G04720.2 31.646 158 101 5 220 372 75 230 1.37e-12 70.9
MsaG036561 AT4G04720.1 31.646 158 101 5 220 372 75 230 1.37e-12 70.9
MsaG036561 AT1G50240.3 30.702 114 73 2 445 558 149 256 1.48e-12 71.6
MsaG036561 AT1G50240.3 28.221 163 113 3 221 383 3 161 3.95e-11 67.0
MsaG036561 AT1G50240.2 30.702 114 73 2 445 558 149 256 1.48e-12 71.6
MsaG036561 AT1G50240.2 28.221 163 113 3 221 383 3 161 3.95e-11 67.0
MsaG036561 AT5G45430.2 29.947 187 113 7 221 404 1 172 1.50e-12 70.5
MsaG036561 AT1G50700.2 33.333 153 96 4 224 372 73 223 1.51e-12 70.9
MsaG036561 AT5G45430.1 29.947 187 113 7 221 404 1 172 1.77e-12 70.5
MsaG036561 AT2G35890.2 26.721 247 158 9 164 399 68 302 1.86e-12 70.5
MsaG036561 AT2G35890.1 26.721 247 158 9 164 399 68 302 1.86e-12 70.5
MsaG036561 AT3G20410.2 32.026 153 98 4 224 372 91 241 2.52e-12 70.1
MsaG036561 AT3G20410.1 32.026 153 98 4 224 372 91 241 2.52e-12 70.1
MsaG036561 AT1G69220.2 29.452 146 94 3 233 375 231 370 2.55e-12 70.5
MsaG036561 AT4G26070.4 30.047 213 125 8 186 383 20 223 2.60e-12 68.9
MsaG036561 AT4G35310.2 27.322 183 124 5 224 404 97 272 3.14e-12 69.7
MsaG036561 AT4G35310.1 27.322 183 124 5 224 404 97 272 3.14e-12 69.7
MsaG036561 AT1G01140.3 28.743 167 112 3 205 371 5 164 3.20e-12 69.3
MsaG036561 AT1G01140.1 28.743 167 112 3 205 371 5 164 3.24e-12 69.3
MsaG036561 AT4G19110.1 29.189 185 117 5 221 404 1 172 3.33e-12 69.3
MsaG036561 AT1G30270.1 29.333 150 100 3 224 371 31 176 3.39e-12 69.3
MsaG036561 AT4G19110.2 29.189 185 117 5 221 404 1 172 3.39e-12 69.3
MsaG036561 AT1G53165.3 28.105 153 106 2 223 375 14 162 3.42e-12 70.1
MsaG036561 AT1G53165.1 28.105 153 106 2 223 375 14 162 3.45e-12 70.1
MsaG036561 AT1G01140.2 28.743 167 112 3 205 371 5 164 3.50e-12 69.3
MsaG036561 AT1G53165.2 28.105 153 106 2 223 375 14 162 3.62e-12 69.7
MsaG036561 AT4G26070.1 29.885 174 115 5 212 383 56 224 3.62e-12 68.2
MsaG036561 AT3G23000.1 30.968 155 92 4 224 371 25 171 3.65e-12 69.3
MsaG036561 AT1G32320.1 31.034 145 92 2 227 371 51 187 3.93e-12 68.2
MsaG036561 AT3G61960.2 35.115 131 78 4 229 357 15 140 4.09e-12 69.7
MsaG036561 AT1G30270.2 29.333 150 100 3 224 371 31 176 4.12e-12 69.3
MsaG036561 AT3G61960.1 35.115 131 78 4 229 357 15 140 4.22e-12 69.7
MsaG036561 AT5G58380.1 27.703 148 104 2 224 371 12 156 4.86e-12 68.9
MsaG036561 AT4G26070.5 29.885 174 115 5 212 383 43 211 5.06e-12 68.2
MsaG036561 AT2G41860.1 31.613 155 100 4 222 372 52 204 5.10e-12 68.9
MsaG036561 AT2G41860.2 31.613 155 100 4 222 372 52 204 5.42e-12 68.9
MsaG036561 AT4G26070.2 29.885 174 115 5 212 383 56 224 5.69e-12 68.2
MsaG036561 AT4G26070.3 29.885 174 115 5 212 383 56 224 5.69e-12 68.2
MsaG036561 AT1G12580.1 27.876 226 145 8 179 399 2 214 5.77e-12 68.9
MsaG036561 AT1G48260.1 32.432 148 98 2 224 371 11 156 6.74e-12 68.2
MsaG036561 AT1G63700.1 24.138 232 155 4 212 424 388 617 9.28e-12 68.6
MsaG036561 AT1G63700.2 24.138 232 155 4 212 424 388 617 9.28e-12 68.6
MsaG036561 AT4G36070.1 27.624 181 118 5 224 399 71 243 1.03e-11 68.2
MsaG036561 AT2G41140.1 29.032 186 113 6 223 399 122 297 1.14e-11 68.2
MsaG036561 AT4G36070.2 27.624 181 118 5 224 399 71 243 1.18e-11 68.2
MsaG036561 AT5G66210.3 27.072 181 121 3 223 399 61 234 1.30e-11 67.8
MsaG036561 AT5G04870.1 30.000 180 113 5 224 399 150 320 1.36e-11 67.8
MsaG036561 AT2G38910.1 29.282 181 113 6 224 399 134 304 1.44e-11 67.8
MsaG036561 AT5G66210.5 27.072 181 121 3 223 399 61 234 1.65e-11 67.4
MsaG036561 AT5G66210.6 27.072 181 121 3 223 399 61 234 1.74e-11 67.0
MsaG036561 AT5G66210.4 27.072 181 121 3 223 399 61 234 1.74e-11 67.0
MsaG036561 AT5G66210.1 27.072 181 121 3 223 399 61 234 1.81e-11 67.4
MsaG036561 AT5G66210.2 27.072 181 121 3 223 399 61 234 1.81e-11 67.4
MsaG036561 AT3G56760.1 29.032 186 113 6 223 399 123 298 1.85e-11 67.4
MsaG036561 AT1G78290.3 33.094 139 83 4 221 357 1 131 2.19e-11 66.2
MsaG036561 AT1G78290.2 33.094 139 83 4 221 357 1 131 2.19e-11 66.2
MsaG036561 AT3G57530.2 33.557 149 93 4 228 372 67 213 2.82e-11 66.2
MsaG036561 AT2G17290.1 29.299 157 107 4 224 378 85 239 3.10e-11 66.6
MsaG036561 AT2G17290.2 29.299 157 107 4 224 378 85 239 3.10e-11 66.6
MsaG036561 AT4G30960.1 29.677 155 105 3 217 371 18 168 3.40e-11 66.2
MsaG036561 AT4G10010.2 30.769 169 112 4 206 371 136 302 3.41e-11 66.6
MsaG036561 AT2G31500.1 33.333 153 96 4 224 372 66 216 3.43e-11 66.6
MsaG036561 AT3G57530.1 32.680 153 97 4 224 372 63 213 3.55e-11 66.2
MsaG036561 AT5G19360.1 31.373 153 99 4 224 372 68 218 4.65e-11 65.9
MsaG036561 AT1G73500.1 29.730 148 93 4 227 371 50 189 5.44e-11 64.7
MsaG036561 AT5G23580.1 28.649 185 116 6 230 407 28 203 5.51e-11 65.9
MsaG036561 AT5G12180.1 31.373 153 99 4 224 372 73 223 6.21e-11 65.5
MsaG036561 AT3G05050.3 30.405 148 102 1 224 371 138 284 6.79e-11 65.5
MsaG036561 AT3G05050.2 30.405 148 102 1 224 371 138 284 6.79e-11 65.5
MsaG036561 AT3G05050.1 30.405 148 102 1 224 371 138 284 6.79e-11 65.5
MsaG036561 AT1G74740.1 31.250 176 108 5 228 399 63 229 6.93e-11 65.5
MsaG036561 AT5G57565.2 32.520 123 72 3 283 401 14 129 7.29e-11 60.5
MsaG036561 AT5G57565.6 32.520 123 72 3 283 401 14 129 7.29e-11 60.5
MsaG036561 AT5G12480.1 29.870 154 102 4 223 372 58 209 8.38e-11 65.1

Find 132 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACACATTCTCCGGTTTA+AGG 0.167457 7:+37982908 None:intergenic
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 7:-37977049 MsaT036561.1:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 7:+37984520 None:intergenic
CCTTCTCCTTTAATAATTTC+AGG 0.201454 7:+37977176 None:intergenic
GGAGATTCTGGAAACCTTAA+AGG 0.266914 7:+37977035 None:intergenic
CGAACACCGTTCAAAGGTTC+TGG 0.281686 7:-37977092 MsaT036561.1:CDS
TTGGCGCCTGAAATTATTAA+AGG 0.315108 7:-37977182 MsaT036561.1:CDS
AGACATTATCATCATAATTA+TGG 0.317831 7:-37984464 MsaT036561.1:CDS
CTATTCAGCCACTGTCTATT+CGG 0.317932 7:-37984181 MsaT036561.1:CDS
AAGCTGACAGTAGGAGATTC+TGG 0.319263 7:+37977023 None:intergenic
TGCAGAAGTTCTCCTTGCTT+TGG 0.324779 7:-37982965 MsaT036561.1:CDS
CTTATATCATTTGCCTTATG+AGG 0.331403 7:+37983964 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 7:+37976959 None:intergenic
GAACGGATGTTGTTTGATTT+CGG 0.346145 7:+37976926 None:intergenic
CCTTGATTATTTCTATATAA+GGG 0.352324 7:+37984521 None:intergenic
TCAGGCTGCATTGCACAGGC+TGG 0.354497 7:+37982760 None:intergenic
CGTTCTTTCACAATGTGAAC+TGG 0.362879 7:-37976908 MsaT036561.1:CDS
GGTTTCATCATCATTGGTCT+TGG 0.367706 7:+37976852 None:intergenic
TTCTTATACGAACTCTTGTT+TGG 0.369049 7:-37977116 MsaT036561.1:CDS
AGATTGGGAAGTGGAGATAT+AGG 0.370938 7:-37983871 MsaT036561.1:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 7:+37984538 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 7:+37984426 None:intergenic
GACATTCTCTTGCTTGGTAA+TGG 0.382581 7:-37983674 MsaT036561.1:CDS
ACCACGATGTTTAATGTTGT+TGG 0.384486 7:-37977062 MsaT036561.1:CDS
ATCATTGGTCTTGGTACCTC+TGG 0.387078 7:+37976861 None:intergenic
AGAACTTGAGTCAAAATTCT+CGG 0.389980 7:+37984322 None:intergenic
GAAGTTGGAATGAACCCTTC+TGG 0.395335 7:-37976813 MsaT036561.1:CDS
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 7:+37982634 None:intergenic
CACAGCCTTCCTATATCATC+AGG 0.399062 7:-37984566 MsaT036561.1:CDS
CAGATTTCGATCTCTCTCTA+AGG 0.405644 7:-37982858 MsaT036561.1:CDS
CTGTGGATTGGTGGACGTTC+GGG 0.406089 7:-37977142 MsaT036561.1:CDS
CGGGGAACCCCTGATGATAT+AGG 0.408570 7:+37984557 None:intergenic
GAGTTTGGTTTCATCATCAT+TGG 0.411212 7:+37976846 None:intergenic
GACTGAGACATTCTCTTGCT+TGG 0.413753 7:-37983680 MsaT036561.1:CDS
GCTGTGGATTGGTGGACGTT+CGG 0.420545 7:-37977143 MsaT036561.1:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 7:+37976944 None:intergenic
TTCATCACTAACATCACTTC+CGG 0.432251 7:+37984023 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 7:-37977012 MsaT036561.1:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 7:+37976958 None:intergenic
TTGGAGTACTTGCACATGCT+TGG 0.440491 7:-37982946 MsaT036561.1:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 7:+37982616 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 7:-37983886 MsaT036561.1:CDS
CCACGATGTTTAATGTTGTT+GGG 0.443702 7:-37977061 MsaT036561.1:CDS
GTGGCGACCTTCATGCAATC+AGG 0.443810 7:-37983639 MsaT036561.1:CDS
GGTACTCGCTCTACAGATAC+TGG 0.445373 7:+37984044 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 7:+37984239 None:intergenic
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 7:+37982650 None:intergenic
TCTCTCACCAACACATTCTC+CGG 0.454583 7:+37982901 None:intergenic
AAGAAACAATGAAAGGTTGC+CGG 0.455081 7:-37984381 MsaT036561.1:CDS
AACTCAACTGAAAATGAAGT+TGG 0.456517 7:-37976828 MsaT036561.1:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 7:+37984629 None:intergenic
GGCTGGCTGAATGCAGTATC+CGG 0.457718 7:+37982777 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 7:-37983977 MsaT036561.1:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 7:-37983625 MsaT036561.1:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.470852 7:-37982607 MsaT036561.1:CDS
TTTGATGACTTCACTAGAGT+TGG 0.471407 7:+37982823 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 7:-37983960 MsaT036561.1:CDS
AGTAGGCACACACGAGTACT+TGG 0.482217 7:-37977201 MsaT036561.1:intron
TTAACAACGGCTCGTTTCGA+TGG 0.483495 7:+37984266 None:intergenic
GTATATCTAGCTGAACTTAG+TGG 0.485543 7:-37983844 MsaT036561.1:CDS
GCAGTCAGGCTGCATTGCAC+AGG 0.499747 7:+37982756 None:intergenic
GATTGCATGAAGGTCGCCAC+CGG 0.501221 7:+37983642 None:intergenic
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 7:-37977013 MsaT036561.1:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 7:-37982796 MsaT036561.1:CDS
CAGGGGTTCCCCGTTCTTCG+CGG 0.512241 7:-37984547 MsaT036561.1:CDS
CTTCTTACGAGTTGCAAGCT+CGG 0.513729 7:+37983783 None:intergenic
TCAAAGTGTGTATATAATGT+AGG 0.514064 7:+37983703 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 7:+37983632 None:intergenic
ATGTCCTTTGTAGGTGATAG+AGG 0.519864 7:-37982598 MsaT036561.1:intron
ACGAGCTCGCGAGGGGATGT+TGG 0.520707 7:-37983920 MsaT036561.1:CDS
TAGTAACTGTTCTGAGGACT+AGG 0.528414 7:+37984201 None:intergenic
CATGCATGTTGGATGCAGTC+AGG 0.536354 7:+37982742 None:intergenic
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 7:+37984537 None:intergenic
AATGTGTTGGTGAGAGAAGA+TGG 0.540509 7:-37982895 MsaT036561.1:CDS
AATCTATAGAGACCTTAAAC+CGG 0.546273 7:-37982920 MsaT036561.1:CDS
ATTGGTCTTGGTACCTCTGG+AGG 0.546953 7:+37976864 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 7:-37984600 MsaT036561.1:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 7:-37983880 MsaT036561.1:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 7:+37976799 None:intergenic
TTTGGTCGAACACCGTTCAA+AGG 0.556119 7:-37977098 MsaT036561.1:CDS
CCCTTATATAGAAATAATCA+AGG 0.559154 7:-37984521 MsaT036561.1:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 7:-37983959 MsaT036561.1:CDS
TCAAGCTGTACGAGCTCGCG+AGG 0.560269 7:-37983929 MsaT036561.1:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 7:-37977151 MsaT036561.1:CDS
ATAGGAAGGCTGTGGCGTAT+CGG 0.567152 7:+37984575 None:intergenic
CCTGAAATTATTAAAGGAGA+AGG 0.569143 7:-37977176 MsaT036561.1:CDS
GAACACCGTTCAAAGGTTCT+GGG 0.569944 7:-37977091 MsaT036561.1:CDS
GCGAGGGGATGTTGGAAATG+AGG 0.572035 7:-37983912 MsaT036561.1:CDS
ATTGCATGAAGGTCGCCACC+GGG 0.573434 7:+37983643 None:intergenic
AATTCTAAATAATTACCAGA+AGG 0.574306 7:+37976798 None:intergenic
CGATTCCCAGAACCTTTGAA+CGG 0.574792 7:+37977086 None:intergenic
AGTATCTGTAGAGCGAGTAC+CGG 0.579881 7:-37984042 MsaT036561.1:CDS
CAGTTCACATTGTGAAAGAA+CGG 0.588245 7:+37976909 None:intergenic
GAAGCTACTGAGGGCTCAGA+CGG 0.588647 7:-37983764 MsaT036561.1:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 7:-37977154 MsaT036561.1:CDS
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 7:+37982635 None:intergenic
GCTGCAAGGGACTTGATCAG+AGG 0.597259 7:-37976999 MsaT036561.1:CDS
GTTCTTTCACAATGTGAACT+GGG 0.610163 7:-37976907 MsaT036561.1:CDS
ATCACGAAAGAAACAATGAA+AGG 0.611280 7:-37984388 MsaT036561.1:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.617928 7:+37984253 None:intergenic
CACCGTCTTGCCTATAGACG+CGG 0.620769 7:-37976954 MsaT036561.1:CDS
CAACTCGTAAGAAGCTACTG+AGG 0.620806 7:-37983774 MsaT036561.1:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 7:+37984524 None:intergenic
AAGCTGTACGAGCTCGCGAG+GGG 0.625680 7:-37983927 MsaT036561.1:CDS
AGAAGGACATGGAAGTGCTG+TGG 0.625780 7:-37977159 MsaT036561.1:CDS
TGCAGTTGAAACTATATCAG+AGG 0.626378 7:-37984621 MsaT036561.1:CDS
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 7:+37977014 None:intergenic
CATACCTCTATCACCTACAA+AGG 0.634661 7:+37982594 None:intergenic
CAAGCTGTACGAGCTCGCGA+GGG 0.635118 7:-37983928 MsaT036561.1:CDS
ATTATTAAAGGAGAAGGACA+TGG 0.636670 7:-37977170 MsaT036561.1:CDS
ACAGCCTTCCTATATCATCA+GGG 0.636682 7:-37984565 MsaT036561.1:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 7:+37982640 None:intergenic
AACTCGTAAGAAGCTACTGA+GGG 0.642428 7:-37983773 MsaT036561.1:CDS
GAACCCCTGATGATATAGGA+AGG 0.643437 7:+37984561 None:intergenic
CCTTAAACCGGAGAATGTGT+TGG 0.644760 7:-37982908 MsaT036561.1:CDS
CTGATGATATAGGAAGGCTG+TGG 0.644996 7:+37984567 None:intergenic
TGTGCAAGTACTCCAAAGCA+AGG 0.645177 7:+37982953 None:intergenic
TTTCGCTTCCGAATAGACAG+TGG 0.646206 7:+37984173 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 7:+37984195 None:intergenic
CTTCACTAGAGTTGGACTGA+CGG 0.654161 7:+37982831 None:intergenic
CCGCTGCGCTAATCCTCCAG+AGG 0.655966 7:-37976877 MsaT036561.1:CDS
CTATAGGCAAGACGGTGTTG+GGG 0.657836 7:+37976960 None:intergenic
CAGCCTTCCTATATCATCAG+GGG 0.658178 7:-37984564 MsaT036561.1:CDS
CAATCAGGCAAAGACAACCT+GGG 0.663791 7:-37983624 MsaT036561.1:CDS
AAGGGAGGCCGCGAAGAACG+GGG 0.665161 7:+37984539 None:intergenic
TAGCTGAACTTAGTGGCACA+AGG 0.668425 7:-37983837 MsaT036561.1:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 7:+37982731 None:intergenic
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 7:+37976952 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 7:-37982624 MsaT036561.1:CDS
AGCAACACGAGTAGTTTGAG+CGG 0.684691 7:-37984000 MsaT036561.1:CDS
CCTCTGGAGGATTAGCGCAG+CGG 0.691007 7:+37976877 None:intergenic
CCCAACAACATTAAACATCG+TGG 0.694205 7:+37977061 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 37976785 37984660 37976785 ID=MsaG036561
Chr7 mRNA 37976785 37984660 37976785 ID=MsaT036561.1;Parent=MsaG036561
Chr7 exon 37976785 37977218 37976785 ID=MsaT036561.1.exon4;Parent=MsaT036561.1
Chr7 CDS 37976785 37977218 37976785 ID=cds.MsaT036561.1;Parent=MsaT036561.1
Chr7 exon 37982599 37982996 37982599 ID=MsaT036561.1.exon3;Parent=MsaT036561.1
Chr7 CDS 37982599 37982996 37982599 ID=cds.MsaT036561.1;Parent=MsaT036561.1
Chr7 exon 37983598 37984076 37983598 ID=MsaT036561.1.exon2;Parent=MsaT036561.1
Chr7 CDS 37983598 37984076 37983598 ID=cds.MsaT036561.1;Parent=MsaT036561.1
Chr7 exon 37984160 37984660 37984160 ID=MsaT036561.1.exon1;Parent=MsaT036561.1
Chr7 CDS 37984160 37984660 37984160 ID=cds.MsaT036561.1;Parent=MsaT036561.1
Gene Sequence

>MsaT036561.1

ATGGAGTCTCCTATGACTGCAGTTGAAACTATATCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATATCATCAGGGGTTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAGAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAAATGTTTGATGATGATTCCGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCGGAAGCGAAACAAAGTTTCACCAAGTAGGAAAACCAGTATCTGTAGAGCGAGTACCGGAAGTGATGTTAGTGATGAAAGCAACACGAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTACGAGCTCGCGAGGGGATGTTGGAAATGAGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACATTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAACACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAACCGGAGAATGTGTTGGTGAGAGAAGATGGTCATATCATTTTCTCAGATTTCGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCATCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCCTGTGCAATGCAGCCTGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCAATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGTGATAGAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGAGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCGTTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCTCCAGAGGTACCAAGACCAATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTAATTATTTAGAATTTGATTACTTTTGA
Protein sequence

>MsaT036561.1

MESPMTAVETISEVQNSVSEVPIRHSLPISSGVPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQMFDDDSENFDSSSEVLESDNSILVPSKRAVVNQPKNYYSQSETSFVLVLRTVTIQPLSIRKRNKVSPSRKTSICRASTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMRHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIIFSDFDLSLRCTVSPTLVKSSNPITETKSSGYCIQPACAMQPDCIQHACFSPRFQSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGDRGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRPMMMKPNSTENEVGMNPSGNYLEFDYF*