AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG036665


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036665 MtrunA17_Chr7g0228401 81.551 477 60 3 1 452 31 504 0.0 775
MsaG036665 MtrunA17_Chr7g0228531 48.423 444 164 9 5 445 35 416 5.31e-130 382
MsaG036665 MtrunA17_Chr7g0228481 48.198 444 165 10 5 445 35 416 2.74e-127 375
MsaG036665 MtrunA17_Chr1g0177901 63.107 206 72 1 238 443 5 206 1.39e-85 261
MsaG036665 MtrunA17_Chr7g0233161 47.143 280 108 3 1 278 109 350 1.21e-71 230
MsaG036665 MtrunA17_Chr7g0233061 36.364 407 172 9 32 435 36 358 3.01e-69 224
MsaG036665 MtrunA17_Chr4g0046181 45.000 280 114 3 1 278 31 272 1.22e-58 194
MsaG036665 MtrunA17_Chr3g0117511 47.059 204 100 2 176 379 139 334 2.96e-50 176
MsaG036665 MtrunA17_Chr7g0233151 53.529 170 62 4 277 444 1 155 5.00e-49 165
MsaG036665 MtrunA17_Chr4g0058991 51.875 160 68 2 197 356 187 337 2.53e-46 166
MsaG036665 MtrunA17_Chr5g0429661 53.435 131 53 3 230 353 125 254 8.26e-44 157
MsaG036665 MtrunA17_Chr7g0238631 61.000 100 38 1 230 328 116 215 1.86e-35 138
MsaG036665 MtrunA17_Chr3g0139671 53.465 101 46 1 230 329 88 188 6.89e-32 129
MsaG036665 MtrunA17_Chr1g0157731 53.465 101 46 1 230 329 94 194 9.97e-32 129
MsaG036665 MtrunA17_Chr5g0397841 56.842 95 41 0 227 321 110 204 1.40e-30 123
MsaG036665 MtrunA17_Chr4g0022901 40.714 140 78 3 227 363 15 152 1.81e-28 113
MsaG036665 MtrunA17_Chr4g0008551 52.083 96 46 0 230 325 41 136 9.26e-28 113
MsaG036665 MtrunA17_Chr3g0133601 48.077 104 54 0 220 323 30 133 1.07e-27 110
MsaG036665 MtrunA17_Chr4g0022931 35.849 159 81 4 227 379 15 158 2.82e-27 110
MsaG036665 MtrunA17_Chr4g0046171 50.360 139 52 4 308 444 1 124 3.43e-27 105
MsaG036665 MtrunA17_Chr5g0401731 48.113 106 55 0 218 323 6 111 6.51e-27 110
MsaG036665 MtrunA17_Chr7g0270891 31.795 195 121 4 227 417 14 200 1.03e-26 110
MsaG036665 MtrunA17_Chr4g0053431 50.000 94 47 0 230 323 8 101 1.24e-26 108
MsaG036665 MtrunA17_Chr2g0323351 44.444 117 61 2 227 342 14 127 1.70e-26 107
MsaG036665 MtrunA17_Chr4g0022911 43.810 105 56 2 227 328 15 119 6.85e-26 106
MsaG036665 MtrunA17_Chr1g0211161 46.939 98 51 1 227 323 15 112 7.12e-25 102
MsaG036665 MtrunA17_Chr6g0460661 34.356 163 91 2 221 383 10 156 8.44e-25 100
MsaG036665 MtrunA17_Chr8g0342541 43.137 102 57 1 225 325 12 113 8.58e-25 104
MsaG036665 MtrunA17_Chr2g0281071 49.485 97 48 1 230 325 18 114 9.40e-25 104
MsaG036665 MtrunA17_Chr3g0117091 45.000 100 54 1 227 325 14 113 1.40e-24 104
MsaG036665 MtrunA17_Chr4g0058631 41.667 132 70 4 227 352 14 144 1.69e-24 104
MsaG036665 MtrunA17_Chr1g0193371 43.103 116 63 2 227 339 14 129 1.79e-24 104
MsaG036665 MtrunA17_Chr4g0048511 49.485 97 48 1 230 325 18 114 2.58e-24 103
MsaG036665 MtrunA17_Chr6g0480581 46.392 97 52 0 225 321 2 98 2.62e-24 101
MsaG036665 MtrunA17_Chr1g0193801 45.918 98 52 1 227 323 14 111 3.07e-24 103
MsaG036665 MtrunA17_Chr8g0385321 45.283 106 56 2 224 327 11 116 3.13e-24 102
MsaG036665 MtrunA17_Chr5g0440781 49.057 106 52 2 224 327 11 116 3.41e-24 99.4
MsaG036665 MtrunA17_Chr8g0342521 44.118 102 56 1 225 325 12 113 3.46e-24 103
MsaG036665 MtrunA17_Chr6g0454921 44.231 104 58 0 220 323 8 111 4.20e-24 99.8
MsaG036665 MtrunA17_Chr1g0154031 43.220 118 66 1 230 346 81 198 4.25e-24 103
MsaG036665 MtrunA17_Chr3g0099131 49.000 100 50 1 224 322 40 139 4.90e-24 104
MsaG036665 MtrunA17_Chr4g0037141 44.915 118 57 3 224 333 11 128 5.13e-24 101
MsaG036665 MtrunA17_Chr5g0440761 49.057 106 52 2 224 327 11 116 5.95e-24 100
MsaG036665 MtrunA17_Chr5g0441141 49.057 106 52 2 224 327 11 116 6.42e-24 100
MsaG036665 MtrunA17_Chr2g0330041 43.137 102 57 1 225 325 12 113 7.00e-24 103
MsaG036665 MtrunA17_Chr5g0437321 50.000 94 47 0 230 323 22 115 7.19e-24 100
MsaG036665 MtrunA17_Chr8g0354661 47.321 112 56 2 213 322 25 135 7.40e-24 104
MsaG036665 MtrunA17_Chr3g0080861 48.571 105 52 2 227 329 39 143 1.17e-23 103
MsaG036665 MtrunA17_Chr3g0131121 46.667 105 54 2 225 327 12 116 1.30e-23 100
MsaG036665 MtrunA17_Chr2g0328771 42.478 113 60 2 227 334 22 134 1.34e-23 100
MsaG036665 MtrunA17_Chr5g0410961 43.810 105 58 1 222 325 9 113 1.39e-23 101
MsaG036665 MtrunA17_Chr5g0397231 40.310 129 76 1 227 354 14 142 1.47e-23 101
MsaG036665 MtrunA17_Chr6g0452271 43.689 103 57 1 224 325 11 113 1.99e-23 100
MsaG036665 MtrunA17_Chr2g0309911 44.792 96 52 1 229 323 15 110 2.04e-23 100
MsaG036665 MtrunA17_Chr7g0271241 45.833 96 51 1 227 321 14 109 2.23e-23 101
MsaG036665 MtrunA17_Chr4g0055981 39.231 130 76 2 230 356 60 189 2.33e-23 98.2
MsaG036665 MtrunA17_Chr4g0042501 44.144 111 61 1 230 339 108 218 4.05e-23 101
MsaG036665 MtrunA17_Chr5g0417621 44.144 111 61 1 230 339 137 247 4.77e-23 101
MsaG036665 MtrunA17_Chr3g0088461 47.000 100 52 1 227 325 24 123 4.85e-23 99.8
MsaG036665 MtrunA17_Chr7g0254261 33.333 216 120 5 225 437 87 281 4.96e-23 100
MsaG036665 MtrunA17_Chr5g0395281 47.872 94 48 1 230 322 17 110 5.30e-23 99.0
MsaG036665 MtrunA17_Chr8g0387421 46.392 97 51 1 227 322 14 110 5.50e-23 99.4
MsaG036665 MtrunA17_Chr8g0342481 41.748 103 58 2 225 325 12 114 8.44e-23 100
MsaG036665 MtrunA17_Chr5g0435101 44.660 103 56 1 224 325 10 112 1.08e-22 95.9
MsaG036665 MtrunA17_Chr4g0039971 47.872 94 48 1 230 322 18 111 1.10e-22 99.0
MsaG036665 MtrunA17_Chr3g0115821 45.745 94 50 1 230 322 17 110 1.13e-22 98.6
MsaG036665 MtrunA17_Chr4g0032401 37.500 144 83 2 227 363 19 162 1.29e-22 98.2
MsaG036665 MtrunA17_Chr7g0261281 46.316 95 48 2 230 322 17 110 1.88e-22 96.7
MsaG036665 MtrunA17_Chr3g0125801 50.000 92 46 0 230 321 19 110 2.87e-22 96.7
MsaG036665 MtrunA17_Chr7g0274581 44.211 95 50 2 230 322 17 110 2.88e-22 94.4
MsaG036665 MtrunA17_Chr8g0349261 49.474 95 46 2 230 322 18 112 3.33e-22 96.7
MsaG036665 MtrunA17_Chr4g0057031 41.379 116 59 2 208 322 3 110 3.94e-22 95.9
MsaG036665 MtrunA17_Chr2g0327351 38.983 118 70 2 224 339 11 128 4.87e-22 96.3
MsaG036665 MtrunA17_Chr2g0323411 47.423 97 50 1 230 325 17 113 6.14e-22 96.3
MsaG036665 MtrunA17_Chr2g0311221 47.872 94 48 1 230 322 19 112 6.72e-22 96.3
MsaG036665 MtrunA17_Chr1g0203411 46.809 94 49 1 230 322 17 110 7.63e-22 95.5
MsaG036665 MtrunA17_Chr4g0042671 45.745 94 50 1 230 322 17 110 1.04e-21 96.7
MsaG036665 MtrunA17_Chr4g0022881 41.414 99 57 1 225 322 12 110 1.21e-21 93.2
MsaG036665 MtrunA17_Chr8g0346561 47.872 94 48 1 230 322 17 110 1.35e-21 94.7
MsaG036665 MtrunA17_Chr4g0022891 40.000 105 62 1 227 330 14 118 1.49e-21 93.2
MsaG036665 MtrunA17_Chr1g0187761 40.179 112 65 2 230 339 17 128 1.58e-21 93.6
MsaG036665 MtrunA17_Chr8g0362231 42.727 110 61 1 230 337 25 134 1.59e-21 96.7
MsaG036665 MtrunA17_Chr7g0275911 47.872 94 48 1 230 322 17 110 1.79e-21 93.6
MsaG036665 MtrunA17_Chr5g0416341 47.312 93 49 0 230 322 29 121 2.07e-21 96.7
MsaG036665 MtrunA17_Chr4g0028311 42.991 107 58 3 230 333 17 123 2.74e-21 94.4
MsaG036665 MtrunA17_Chr4g0070641 46.809 94 49 1 230 322 17 110 2.77e-21 90.5
MsaG036665 MtrunA17_Chr4g0044421 42.453 106 56 2 223 325 10 113 3.07e-21 91.3
MsaG036665 MtrunA17_Chr5g0434571 45.745 94 50 1 230 322 53 146 3.12e-21 94.7
MsaG036665 MtrunA17_Chr1g0167691 44.681 94 51 1 230 322 17 110 3.47e-21 92.8
MsaG036665 MtrunA17_Chr1g0151941 43.158 95 52 2 230 322 17 111 5.34e-21 92.0
MsaG036665 MtrunA17_Chr7g0217741 45.745 94 50 1 230 322 17 110 5.43e-21 93.2
MsaG036665 MtrunA17_Chr1g0192411 38.686 137 74 2 227 362 14 141 5.54e-21 94.7
MsaG036665 MtrunA17_Chr5g0417821 44.118 102 56 1 221 321 3 104 5.57e-21 92.8
MsaG036665 MtrunA17_Chr4g0070611 46.809 94 49 1 230 322 17 110 5.58e-21 93.2
MsaG036665 MtrunA17_Chr3g0135311 35.762 151 92 4 224 369 11 161 6.15e-21 93.6
MsaG036665 MtrunA17_Chr5g0441131 45.192 104 55 2 224 325 8 111 6.41e-21 90.1
MsaG036665 MtrunA17_Chr3g0110351 34.545 165 101 4 230 391 17 177 6.52e-21 93.2
MsaG036665 MtrunA17_Chr7g0228231 40.179 112 66 1 212 322 1 112 8.00e-21 90.5
MsaG036665 MtrunA17_Chr6g0460671 47.253 91 48 0 230 320 102 192 8.85e-21 93.2
MsaG036665 MtrunA17_Chr1g0167661 44.660 103 54 2 230 329 17 119 1.03e-20 91.3
MsaG036665 MtrunA17_Chr1g0152011 38.333 120 71 3 224 340 11 130 1.22e-20 92.8
MsaG036665 MtrunA17_Chr1g0209661 41.441 111 60 2 230 335 32 142 1.26e-20 92.0
MsaG036665 MtrunA17_Chr7g0240821 39.640 111 63 3 230 337 6 115 1.71e-20 90.1
MsaG036665 MtrunA17_Chr4g0054391 42.000 100 56 2 224 321 11 110 1.81e-20 91.3
MsaG036665 MtrunA17_Chr5g0400821 41.071 112 63 3 224 332 11 122 2.79e-20 91.3
MsaG036665 MtrunA17_Chr4g0013361 33.125 160 98 4 230 380 15 174 3.79e-20 90.5
MsaG036665 MtrunA17_Chr6g0450101 35.938 128 80 2 212 337 1 128 4.75e-20 88.2
MsaG036665 MtrunA17_Chr7g0228891 43.617 94 52 1 230 322 17 110 6.11e-20 89.4
MsaG036665 MtrunA17_Chr8g0334881 44.000 100 54 2 230 327 15 114 7.71e-20 90.1
MsaG036665 MtrunA17_Chr5g0434931 41.000 100 58 1 227 325 37 136 9.34e-20 89.0
MsaG036665 MtrunA17_Chr1g0168661 38.525 122 68 3 230 345 26 146 9.51e-20 88.6
MsaG036665 MtrunA17_Chr3g0104491 51.250 80 35 1 277 352 17 96 9.51e-20 89.4
MsaG036665 MtrunA17_Chr7g0247131 50.667 75 35 1 250 322 2 76 1.58e-19 88.2
MsaG036665 MtrunA17_Chr1g0186061 42.553 94 53 1 230 322 25 118 1.73e-19 87.8
MsaG036665 MtrunA17_Chr7g0228991 41.237 97 56 1 227 322 31 127 1.75e-19 88.2
MsaG036665 MtrunA17_Chr1g0180391 42.000 100 57 1 224 322 18 117 1.81e-19 87.0
MsaG036665 MtrunA17_Chr4g0030881 40.541 111 58 1 230 332 12 122 2.01e-19 87.8
MsaG036665 MtrunA17_Chr3g0103281 39.815 108 63 2 216 322 4 110 3.03e-19 88.6
MsaG036665 MtrunA17_Chr8g0343831 42.424 99 56 1 225 322 8 106 3.76e-19 86.7
MsaG036665 MtrunA17_Chr2g0322521 46.552 116 57 2 212 322 12 127 4.41e-19 89.0
MsaG036665 MtrunA17_Chr2g0327821 40.171 117 66 2 230 345 11 124 4.55e-19 86.3
MsaG036665 MtrunA17_Chr3g0121241 41.489 94 54 1 230 322 47 140 4.66e-19 87.4
MsaG036665 MtrunA17_Chr1g0203441 42.268 97 55 1 227 322 15 111 9.41e-19 85.9
MsaG036665 MtrunA17_Chr7g0264641 40.594 101 58 2 224 322 11 111 9.69e-19 85.9
MsaG036665 MtrunA17_Chr5g0434911 41.000 100 58 1 227 325 23 122 1.13e-18 85.9
MsaG036665 MtrunA17_Chr6g0453471 42.553 94 53 1 230 322 17 110 1.34e-18 87.0
MsaG036665 MtrunA17_Chr4g0072751 41.584 101 57 2 224 322 11 111 1.53e-18 86.7
MsaG036665 MtrunA17_Chr7g0220341 41.748 103 57 1 223 322 23 125 1.58e-18 85.5
MsaG036665 MtrunA17_Chr5g0434841 42.000 100 57 1 227 325 22 121 2.18e-18 85.9
MsaG036665 MtrunA17_Chr1g0194301 30.476 210 130 7 217 415 24 228 2.22e-18 85.1
MsaG036665 MtrunA17_Chr7g0217221 43.617 94 52 1 230 322 17 110 2.81e-18 84.7
MsaG036665 MtrunA17_Chr6g0470971 39.252 107 64 1 227 332 16 122 3.19e-18 84.7
MsaG036665 MtrunA17_Chr5g0434831 41.237 97 56 1 230 325 12 108 4.18e-18 82.4
MsaG036665 MtrunA17_Chr4g0068061 40.000 100 59 1 227 325 14 113 5.30e-18 85.1
MsaG036665 MtrunA17_Chr5g0421201 51.765 85 35 2 279 362 12 91 6.22e-18 81.6
MsaG036665 MtrunA17_Chr4g0060721 40.777 103 55 3 230 328 18 118 2.00e-17 83.2
MsaG036665 MtrunA17_Chr1g0194291 37.168 113 70 1 211 322 7 119 2.64e-17 81.6
MsaG036665 MtrunA17_Chr5g0434901 50.000 66 33 0 260 325 9 74 2.87e-17 77.8
MsaG036665 MtrunA17_Chr7g0254411 42.574 101 56 2 230 328 17 117 3.94e-17 82.4
MsaG036665 MtrunA17_Chr3g0099141 44.048 84 46 1 224 306 39 122 9.27e-17 77.0
MsaG036665 MtrunA17_Chr3g0092401 41.237 97 56 1 230 325 18 114 9.76e-17 80.9
MsaG036665 MtrunA17_Chr1g0194951 42.553 94 53 1 230 322 17 110 9.86e-17 81.6
MsaG036665 MtrunA17_Chr6g0453211 40.426 94 55 1 230 322 17 110 1.14e-16 80.9
MsaG036665 MtrunA17_Chr8g0360111 40.206 97 57 1 227 322 27 123 2.24e-16 79.0
MsaG036665 MtrunA17_Chr3g0104501 55.357 56 25 0 223 278 129 184 2.47e-16 77.4
MsaG036665 MtrunA17_Chr2g0293911 42.553 94 53 1 230 322 29 122 1.50e-15 77.4
MsaG036665 MtrunA17_Chr7g0269831 43.750 128 61 4 227 351 14 133 2.11e-15 77.4
MsaG036665 MtrunA17_Chr2g0323321 38.158 76 46 1 230 304 16 91 2.46e-15 72.0
MsaG036665 MtrunA17_Chr4g0068921 39.252 107 64 1 222 327 21 127 3.27e-15 73.9
MsaG036665 MtrunA17_Chr6g0487491 35.922 103 56 3 230 322 17 119 4.01e-15 75.1
MsaG036665 MtrunA17_Chr5g0425591 45.238 84 44 2 224 305 8 91 4.37e-15 70.9
MsaG036665 MtrunA17_Chr7g0238651 31.138 167 97 4 230 385 10 169 1.31e-14 75.1
MsaG036665 MtrunA17_Chr3g0093811 40.000 80 44 2 247 322 1 80 1.67e-14 73.6
MsaG036665 MtrunA17_Chr7g0229101 46.970 66 35 0 260 325 8 73 1.88e-14 72.0
MsaG036665 MtrunA17_Chr5g0395221 43.056 72 40 1 230 300 17 88 1.80e-13 65.9
MsaG036665 MtrunA17_Chr8g0342531 37.500 80 47 2 229 306 16 94 1.89e-13 68.2
MsaG036665 MtrunA17_Chr8g0342511 38.889 72 43 1 229 299 16 87 3.42e-13 65.5
MsaG036665 MtrunA17_Chr4g0042611 40.278 72 42 1 230 300 17 88 3.89e-13 65.1
MsaG036665 MtrunA17_Chr8g0342471 38.462 78 46 2 226 301 13 90 1.00e-12 65.5
MsaG036665 MtrunA17_Chr6g0483051 39.362 94 56 1 227 320 120 212 1.12e-12 70.1
MsaG036665 MtrunA17_Chr6g0483051 35.165 91 58 1 230 320 72 161 7.61e-12 67.4
MsaG036665 MtrunA17_Chr7g0229131 43.939 66 37 0 260 325 8 73 1.12e-12 66.2
MsaG036665 MtrunA17_Chr8g0342461 39.474 76 42 3 229 301 16 90 1.65e-12 64.7
MsaG036665 MtrunA17_Chr7g0274481 36.957 92 57 1 229 320 9 99 5.13e-12 68.2
MsaG036665 MtrunA17_Chr6g0453751 38.372 86 43 3 230 305 25 110 3.12e-11 60.8
MsaG036665 MtrunA17_Chr5g0397691 35.052 97 60 1 225 321 5 98 6.87e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG036665 AT4G18770.1 63.934 122 43 1 230 351 220 340 2.57e-48 171
MsaG036665 AT3G27785.1 40.417 240 125 7 123 356 94 321 2.92e-47 169
MsaG036665 AT5G40360.1 50.314 159 72 4 204 357 133 289 6.46e-43 155
MsaG036665 AT5G11050.1 48.734 158 69 1 178 335 68 213 1.25e-41 153
MsaG036665 AT5G58850.1 44.848 165 75 2 224 372 102 266 2.05e-41 152
MsaG036665 AT2G25230.1 52.846 123 57 1 230 352 29 150 2.37e-36 134
MsaG036665 AT3G09370.1 61.702 94 36 0 230 323 133 226 1.00e-35 138
MsaG036665 AT3G09370.2 61.702 94 36 0 230 323 138 231 1.11e-35 138
MsaG036665 AT3G09370.3 61.702 94 36 0 230 323 146 239 1.73e-35 138
MsaG036665 AT5G11510.3 55.446 101 44 1 230 329 84 184 8.60e-34 135
MsaG036665 AT5G11510.1 55.446 101 44 1 230 329 84 184 8.60e-34 135
MsaG036665 AT5G11510.4 55.446 101 44 1 230 329 84 184 8.60e-34 135
MsaG036665 AT5G11510.2 55.446 101 44 1 230 329 84 184 9.03e-34 135
MsaG036665 AT5G11510.5 55.446 101 44 1 230 329 84 184 9.75e-34 135
MsaG036665 AT5G02320.1 59.574 94 38 0 230 323 130 223 4.86e-33 131
MsaG036665 AT5G02320.2 59.574 94 38 0 230 323 130 223 4.86e-33 131
MsaG036665 AT5G02320.3 59.574 94 38 0 230 323 70 163 6.01e-33 130
MsaG036665 AT5G40430.1 46.154 130 66 3 224 352 51 177 8.23e-32 122
MsaG036665 AT4G32730.5 53.465 101 46 1 230 329 90 190 1.81e-31 128
MsaG036665 AT4G32730.4 53.465 101 46 1 230 329 90 190 1.81e-31 128
MsaG036665 AT4G32730.3 53.465 101 46 1 230 329 90 190 1.81e-31 128
MsaG036665 AT4G32730.2 53.465 101 46 1 230 329 90 190 1.81e-31 128
MsaG036665 AT4G32730.1 53.465 101 46 1 230 329 90 190 2.21e-31 128
MsaG036665 AT4G00540.2 51.818 110 49 2 222 327 98 207 4.48e-28 115
MsaG036665 AT4G00540.2 36.634 101 55 2 230 321 49 149 2.63e-12 68.6
MsaG036665 AT4G00540.1 51.818 110 49 2 222 327 96 205 9.78e-28 115
MsaG036665 AT4G00540.1 36.634 101 55 2 230 321 47 147 4.10e-12 68.2
MsaG036665 AT1G57560.2 34.426 183 92 4 227 405 14 172 1.45e-26 108
MsaG036665 AT3G55730.1 53.125 96 45 0 230 325 59 154 3.50e-26 110
MsaG036665 AT3G28470.1 47.000 100 52 1 224 322 11 110 6.38e-26 107
MsaG036665 AT3G11440.2 51.064 94 45 1 230 322 46 139 2.16e-25 108
MsaG036665 AT3G09230.1 51.042 96 47 0 230 325 58 153 5.23e-25 106
MsaG036665 AT3G11440.3 50.515 97 47 1 227 322 43 139 5.31e-25 108
MsaG036665 AT3G11440.4 50.515 97 47 1 227 322 43 139 5.31e-25 108
MsaG036665 AT3G11440.1 50.515 97 47 1 227 322 43 139 5.31e-25 108
MsaG036665 AT4G01680.1 39.844 128 65 3 227 351 14 132 1.02e-24 104
MsaG036665 AT4G21440.1 50.515 97 47 1 230 325 17 113 1.05e-24 105
MsaG036665 AT3G50060.1 48.936 94 48 0 230 323 9 102 1.23e-24 103
MsaG036665 AT4G01680.3 39.844 128 65 3 227 351 14 132 1.24e-24 102
MsaG036665 AT4G33450.1 52.809 89 42 0 230 318 22 110 1.43e-24 102
MsaG036665 AT1G57560.1 46.939 98 51 1 227 323 14 111 1.80e-24 103
MsaG036665 AT5G67300.1 49.485 97 49 0 227 323 6 102 1.91e-24 103
MsaG036665 AT5G26660.1 45.000 100 54 1 227 325 14 113 2.38e-24 103
MsaG036665 AT4G37260.1 51.064 94 46 0 230 323 16 109 2.67e-24 103
MsaG036665 AT3G13890.2 44.000 100 55 1 227 325 14 113 3.63e-24 103
MsaG036665 AT4G01680.2 37.143 140 64 3 227 351 14 144 3.90e-24 103
MsaG036665 AT4G38620.1 47.573 103 53 1 224 325 11 113 4.10e-24 102
MsaG036665 AT3G13890.1 41.284 109 54 1 227 325 14 122 4.73e-24 103
MsaG036665 AT1G09540.1 46.939 98 51 1 227 323 14 111 4.86e-24 103
MsaG036665 AT4G26930.1 47.872 94 48 1 230 322 24 117 6.98e-24 103
MsaG036665 AT5G12870.1 46.729 107 55 2 227 331 20 126 9.09e-24 100
MsaG036665 AT3G29020.1 47.423 97 51 0 225 321 63 159 9.97e-24 99.8
MsaG036665 AT2G23290.1 47.115 104 55 0 220 323 6 109 1.04e-23 101
MsaG036665 AT3G29020.2 47.423 97 51 0 225 321 65 161 1.22e-23 101
MsaG036665 AT1G69560.1 46.939 98 52 0 224 321 104 201 1.28e-23 101
MsaG036665 AT5G06100.1 48.936 94 47 1 230 322 37 130 1.37e-23 103
MsaG036665 AT1G69560.2 46.939 98 52 0 224 321 120 217 1.37e-23 101
MsaG036665 AT3G12720.1 36.646 161 93 5 229 383 26 183 1.44e-23 100
MsaG036665 AT1G22640.1 48.544 103 51 2 227 327 14 116 1.71e-23 99.8
MsaG036665 AT5G17800.1 46.392 97 52 0 225 321 91 187 1.99e-23 100
MsaG036665 AT5G06100.5 48.936 94 47 1 230 322 37 130 2.66e-23 102
MsaG036665 AT5G06100.2 48.936 94 47 1 230 322 37 130 2.66e-23 102
MsaG036665 AT5G06100.3 48.936 94 47 1 230 322 37 130 2.66e-23 102
MsaG036665 AT5G06100.4 48.936 94 47 1 230 322 37 130 2.66e-23 102
MsaG036665 AT4G28110.1 47.423 97 50 1 230 325 17 113 2.82e-23 99.8
MsaG036665 AT1G26780.1 45.045 111 60 1 230 339 101 211 2.86e-23 99.4
MsaG036665 AT3G08500.1 47.000 100 52 1 227 325 32 131 3.45e-23 100
MsaG036665 AT2G26960.1 43.103 116 65 1 226 340 21 136 3.76e-23 101
MsaG036665 AT1G17950.1 45.361 97 53 0 225 321 3 99 3.78e-23 98.6
MsaG036665 AT5G55020.1 46.465 99 52 1 230 327 31 129 3.87e-23 102
MsaG036665 AT1G63910.1 47.475 99 51 1 225 322 12 110 4.18e-23 100
MsaG036665 AT1G26780.2 45.045 111 60 1 230 339 101 211 4.37e-23 100
MsaG036665 AT4G09460.1 45.283 106 56 2 224 327 11 116 5.47e-23 97.8
MsaG036665 AT5G10280.1 46.078 102 54 1 222 322 9 110 6.81e-23 99.8
MsaG036665 AT5G14750.1 46.392 97 51 1 227 322 18 114 7.24e-23 96.3
MsaG036665 AT4G22680.1 45.545 101 54 1 223 322 10 110 7.84e-23 97.8
MsaG036665 AT2G32460.2 47.423 97 50 1 230 325 11 107 1.02e-22 100
MsaG036665 AT2G32460.1 47.423 97 50 1 230 325 23 119 1.04e-22 100
MsaG036665 AT4G05100.1 47.423 97 50 1 230 325 18 114 1.26e-22 98.6
MsaG036665 AT1G79180.1 47.368 95 47 2 230 322 19 112 1.61e-22 97.8
MsaG036665 AT4G34990.1 44.068 118 58 3 224 333 11 128 1.69e-22 97.1
MsaG036665 AT1G56160.1 45.631 103 54 2 222 322 10 112 2.27e-22 97.4
MsaG036665 AT1G16490.1 44.444 108 56 3 230 334 19 125 3.03e-22 96.7
MsaG036665 AT5G16770.4 36.601 153 72 4 230 377 17 149 3.29e-22 97.4
MsaG036665 AT5G16770.3 36.601 153 72 4 230 377 17 149 3.29e-22 97.4
MsaG036665 AT5G16770.1 36.601 153 72 4 230 377 17 149 3.33e-22 97.4
MsaG036665 AT5G16770.2 36.601 153 72 4 230 377 17 149 3.33e-22 97.4
MsaG036665 AT3G61250.1 46.809 94 49 1 230 322 17 110 4.11e-22 96.7
MsaG036665 AT3G01530.1 40.678 118 68 2 207 322 6 123 5.22e-22 94.0
MsaG036665 AT5G52600.1 45.045 111 57 2 229 338 16 123 5.95e-22 94.0
MsaG036665 AT3G23250.1 34.270 178 104 7 230 400 17 188 6.92e-22 95.9
MsaG036665 AT5G40330.1 44.330 97 53 1 227 322 14 110 7.78e-22 94.0
MsaG036665 AT2G39880.1 45.833 96 52 0 230 325 53 148 8.29e-22 97.1
MsaG036665 AT5G57620.1 40.000 120 68 3 224 339 11 130 1.17e-21 95.9
MsaG036665 AT2G16720.1 46.000 100 52 2 230 327 17 116 1.49e-21 94.4
MsaG036665 AT5G65230.1 45.745 94 50 1 230 322 17 110 1.59e-21 95.1
MsaG036665 AT4G12350.1 44.681 94 51 1 230 322 17 110 2.12e-21 94.4
MsaG036665 AT1G14350.2 35.333 150 90 3 230 372 28 177 2.30e-21 96.7
MsaG036665 AT1G14350.1 35.333 150 90 3 230 372 28 177 2.30e-21 96.7
MsaG036665 AT5G07690.1 44.118 102 56 1 227 327 14 115 2.76e-21 95.1
MsaG036665 AT3G02940.2 45.361 97 52 1 230 325 17 113 3.33e-21 94.4
MsaG036665 AT1G73410.1 43.636 110 61 1 225 333 4 113 3.42e-21 92.8
MsaG036665 AT1G73410.2 43.636 110 61 1 225 333 4 113 4.01e-21 91.7
MsaG036665 AT3G02940.1 45.361 97 52 1 230 325 17 113 5.17e-21 94.0
MsaG036665 AT3G02940.3 45.361 97 52 1 230 325 17 113 5.17e-21 94.0
MsaG036665 AT1G34670.1 44.681 94 51 1 230 322 17 110 5.25e-21 94.7
MsaG036665 AT1G66230.1 45.263 95 49 2 230 322 17 110 6.58e-21 92.8
MsaG036665 AT3G27920.1 45.361 97 52 1 227 322 16 112 8.05e-21 91.3
MsaG036665 AT4G17785.2 40.566 106 62 1 221 325 9 114 8.78e-21 93.6
MsaG036665 AT5G54230.1 45.745 94 50 1 230 322 17 110 8.84e-21 93.2
MsaG036665 AT1G35515.1 41.748 103 58 2 227 327 14 116 9.17e-21 90.9
MsaG036665 AT4G17785.1 40.566 106 62 1 221 325 9 114 9.90e-21 93.6
MsaG036665 AT5G07700.1 44.330 97 53 1 227 322 14 110 1.75e-20 92.8
MsaG036665 AT5G07700.2 44.330 97 53 1 227 322 14 110 1.75e-20 92.8
MsaG036665 AT5G61420.2 44.330 97 53 1 227 322 14 110 2.15e-20 92.8
MsaG036665 AT3G13540.1 34.783 138 87 2 230 364 28 165 2.63e-20 90.5
MsaG036665 AT5G60890.1 46.392 97 51 1 227 322 14 110 3.10e-20 91.3
MsaG036665 AT2G31180.1 33.548 155 96 3 230 378 17 170 3.70e-20 90.1
MsaG036665 AT5G26660.2 45.455 88 37 1 238 325 6 82 4.26e-20 91.3
MsaG036665 AT5G23000.1 43.878 98 53 2 230 325 17 114 5.41e-20 91.3
MsaG036665 AT1G74430.1 44.211 95 52 1 230 323 17 111 5.48e-20 90.1
MsaG036665 AT4G37780.1 42.105 95 53 2 230 322 17 111 6.15e-20 90.5
MsaG036665 AT1G06180.1 42.553 94 53 1 230 322 17 110 1.44e-19 88.2
MsaG036665 AT3G24310.1 42.553 94 53 1 230 322 23 116 1.60e-19 88.6
MsaG036665 AT5G56110.1 42.000 100 57 1 224 322 11 110 2.08e-19 89.4
MsaG036665 AT5G15310.4 42.553 94 53 1 230 322 17 110 2.22e-19 87.8
MsaG036665 AT1G74080.1 43.299 97 54 1 227 322 14 110 2.31e-19 89.4
MsaG036665 AT3G53200.1 37.681 138 78 4 230 360 14 150 2.63e-19 87.4
MsaG036665 AT2G02820.2 33.679 193 103 6 230 401 33 221 2.63e-19 90.5
MsaG036665 AT1G18570.1 41.346 104 60 1 220 322 8 111 2.65e-19 89.4
MsaG036665 AT5G59780.3 44.330 97 53 1 230 325 13 109 3.13e-19 87.0
MsaG036665 AT5G65790.1 42.202 109 59 3 224 328 11 119 3.22e-19 89.4
MsaG036665 AT3G46130.1 45.361 97 52 1 230 325 14 110 3.37e-19 87.4
MsaG036665 AT2G26950.1 33.835 133 79 2 213 340 4 132 3.43e-19 89.4
MsaG036665 AT3G27810.1 41.489 94 54 1 230 322 25 118 3.54e-19 86.7
MsaG036665 AT2G02820.1 33.679 193 103 6 230 401 33 221 4.00e-19 90.1
MsaG036665 AT5G15310.1 42.553 94 53 1 230 322 17 110 4.11e-19 88.6
MsaG036665 AT5G15310.2 42.553 94 53 1 230 322 17 110 4.19e-19 88.2
MsaG036665 AT2G47190.1 37.719 114 70 1 210 322 5 118 4.52e-19 87.4
MsaG036665 AT4G25560.1 43.299 97 54 1 227 322 12 108 4.63e-19 87.4
MsaG036665 AT5G40350.1 40.196 102 60 1 222 322 14 115 4.83e-19 85.9
MsaG036665 AT3G01140.2 42.553 94 53 1 230 322 17 110 5.00e-19 88.6
MsaG036665 AT3G48920.1 43.878 98 52 2 227 322 20 116 5.07e-19 87.0
MsaG036665 AT1G79180.2 36.496 137 52 4 230 331 19 155 5.47e-19 88.2
MsaG036665 AT4G13480.1 42.553 94 53 1 230 322 11 104 5.53e-19 87.0
MsaG036665 AT5G16600.1 45.263 95 49 2 230 322 17 110 6.37e-19 87.8
MsaG036665 AT2G02820.3 33.679 193 103 6 230 401 33 221 6.78e-19 87.8
MsaG036665 AT3G01140.1 42.553 94 53 1 230 322 60 153 7.20e-19 88.6
MsaG036665 AT3G62610.1 43.299 97 54 1 227 322 14 110 9.63e-19 87.8
MsaG036665 AT1G68320.1 39.640 111 62 2 230 335 24 134 1.16e-18 86.3
MsaG036665 AT5G62320.1 42.991 107 52 3 230 327 18 124 1.26e-18 85.5
MsaG036665 AT3G49690.1 41.584 101 57 2 224 322 11 111 1.32e-18 86.7
MsaG036665 AT3G60460.1 42.000 100 56 2 230 327 16 115 1.38e-18 86.7
MsaG036665 AT5G35550.1 40.179 112 64 2 215 325 6 115 1.53e-18 85.5
MsaG036665 AT5G39700.1 43.011 93 53 0 230 322 59 151 1.78e-18 83.6
MsaG036665 AT1G66370.1 42.553 94 53 1 230 322 13 106 2.10e-18 84.7
MsaG036665 AT1G48000.1 41.489 94 54 1 230 322 37 130 2.63e-18 84.3
MsaG036665 AT2G36890.1 39.823 113 65 3 224 333 11 123 2.78e-18 85.5
MsaG036665 AT3G12820.1 42.553 94 53 1 230 322 19 112 3.20e-18 84.3
MsaG036665 AT5G62470.1 41.935 93 54 0 230 322 17 109 3.75e-18 85.9
MsaG036665 AT3G30210.1 38.889 108 64 2 230 335 32 139 4.93e-18 84.3
MsaG036665 AT5G14340.1 40.426 94 55 1 230 322 29 122 4.94e-18 84.3
MsaG036665 AT2G36890.2 39.823 113 65 3 224 333 52 164 7.11e-18 85.1
MsaG036665 AT5G14750.3 50.794 63 31 0 260 322 18 80 7.34e-18 81.3
MsaG036665 AT3G47600.1 30.769 182 97 4 230 385 17 195 8.26e-18 84.7
MsaG036665 AT2G47460.1 35.772 123 76 2 230 349 17 139 1.22e-17 84.7
MsaG036665 AT1G66380.1 44.330 97 53 1 227 322 10 106 1.51e-17 79.7
MsaG036665 AT1G25340.1 42.553 94 53 1 230 322 23 116 1.62e-17 83.2
MsaG036665 AT5G35550.2 49.351 77 37 1 251 325 42 118 2.47e-17 82.0
MsaG036665 AT5G52260.1 39.130 115 67 2 227 339 14 127 2.71e-17 82.0
MsaG036665 AT3G18100.1 41.667 96 56 0 225 320 544 639 3.52e-17 84.7
MsaG036665 AT3G18100.1 40.385 104 58 3 220 320 486 588 1.39e-14 76.6
MsaG036665 AT3G18100.1 38.739 111 59 4 230 338 445 548 1.08e-11 67.8
MsaG036665 AT1G08810.1 40.541 111 64 2 230 338 17 127 3.84e-17 82.0
MsaG036665 AT3G18100.3 41.667 96 56 0 225 320 496 591 4.41e-17 84.3
MsaG036665 AT3G18100.3 40.385 104 58 3 220 320 438 540 1.80e-14 76.3
MsaG036665 AT3G18100.3 38.739 111 59 4 230 338 397 500 1.35e-11 67.4
MsaG036665 AT1G25340.2 41.935 93 50 1 230 322 23 111 5.30e-17 81.6
MsaG036665 AT3G18100.4 41.667 96 56 0 225 320 383 478 5.69e-17 84.0
MsaG036665 AT3G18100.4 40.385 104 58 3 220 320 325 427 2.30e-14 75.9
MsaG036665 AT3G18100.4 38.739 111 59 4 230 338 284 387 2.05e-11 66.6
MsaG036665 AT3G18100.2 41.667 96 56 0 225 320 331 426 7.70e-17 83.6
MsaG036665 AT3G18100.2 40.385 104 58 3 220 320 273 375 3.05e-14 75.5
MsaG036665 AT3G18100.2 38.739 111 59 4 230 338 232 335 2.75e-11 66.2
MsaG036665 AT5G62470.2 41.489 94 54 1 230 322 17 110 9.45e-17 81.6
MsaG036665 AT1G74650.1 42.553 94 53 1 230 322 17 110 1.01e-16 81.6
MsaG036665 AT1G25340.3 41.935 93 50 1 230 322 23 111 1.08e-16 80.9
MsaG036665 AT3G28910.1 41.584 101 57 2 230 328 17 117 1.47e-16 80.9
MsaG036665 AT3G27810.2 31.757 148 93 2 260 407 7 146 1.63e-16 77.8
MsaG036665 AT1G18710.1 37.895 95 58 1 230 323 17 111 1.64e-16 79.7
MsaG036665 AT5G49330.1 40.426 94 55 1 230 322 17 110 1.69e-16 80.9
MsaG036665 AT3G53200.2 40.566 106 58 2 260 360 12 117 4.88e-16 77.0
MsaG036665 AT5G40350.2 47.619 63 33 0 260 322 8 70 6.93e-16 75.9
MsaG036665 AT1G56650.1 43.299 97 54 1 227 322 10 106 1.06e-15 77.0
MsaG036665 AT3G12820.2 50.794 63 31 0 260 322 2 64 1.07e-15 75.9
MsaG036665 AT5G49620.1 41.489 94 54 1 230 322 31 124 5.13e-15 76.3
MsaG036665 AT5G59780.2 46.970 66 35 0 260 325 23 88 6.18e-15 73.9
MsaG036665 AT1G66390.1 43.299 97 54 1 227 322 10 106 6.22e-15 74.7
MsaG036665 AT3G46130.3 46.970 66 35 0 260 325 13 78 1.35e-14 73.6
MsaG036665 AT3G46130.4 46.970 66 35 0 260 325 23 88 1.38e-14 73.6
MsaG036665 AT3G06490.1 40.426 94 55 1 230 322 24 117 3.87e-14 73.6
MsaG036665 AT1G22640.3 56.897 58 24 1 271 327 2 59 5.95e-14 70.9
MsaG036665 AT3G47600.2 31.126 151 76 3 260 385 42 189 8.15e-14 72.8
MsaG036665 AT2G37630.1 34.783 138 85 3 230 363 7 143 1.73e-13 72.0
MsaG036665 AT1G14350.3 35.714 112 65 3 268 372 23 134 2.16e-13 72.0
MsaG036665 AT1G14350.4 35.714 112 65 3 268 372 23 134 2.16e-13 72.0
MsaG036665 AT1G66380.3 52.381 63 30 0 260 322 11 73 4.97e-13 65.9
MsaG036665 AT1G71030.2 42.424 66 37 1 263 327 5 70 1.36e-12 66.6
MsaG036665 AT1G71030.1 42.424 66 37 1 263 327 19 84 1.69e-12 66.6
MsaG036665 AT3G23250.2 31.852 135 82 5 271 400 2 131 4.67e-12 65.9
MsaG036665 AT5G14750.4 48.077 52 27 0 271 322 2 53 6.20e-12 63.5
MsaG036665 AT5G14750.2 48.077 52 27 0 271 322 2 53 6.20e-12 63.5
MsaG036665 AT1G09770.1 36.957 92 57 1 229 320 9 99 8.71e-12 67.8
MsaG036665 AT5G49620.2 36.111 108 54 2 230 322 31 138 8.91e-12 66.6

Find 108 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTGGCAAAGAAATT+TGG 0.124711 7:-40920594 MsaT036665.1:CDS
TTAATACTGACAAAGGAATT+TGG 0.162282 7:-40920480 MsaT036665.1:CDS
TTGTTTGGTGTAAAGGTTAT+TGG 0.233953 7:+40920646 None:intergenic
GGGTATGGCACAATGAATTA+TGG 0.245222 7:-40918336 MsaT036665.1:CDS
AAATTCCTTTGTCAGTATTA+AGG 0.276319 7:+40920482 None:intergenic
AAATTTCTTTGCCAGTATTA+AGG 0.278768 7:+40920596 None:intergenic
CATGGCTAACCAAGACTTTA+GGG 0.299977 7:-40920779 MsaT036665.1:CDS
TAATACTGGCAAAGAAATTT+GGG 0.309003 7:-40920593 MsaT036665.1:CDS
CCCACCAATGCAAGAAATAT+TGG 0.311244 7:+40920336 None:intergenic
GTGTAAAGGTTATTGGAATT+TGG 0.313633 7:+40920653 None:intergenic
TAATACTGACAAAGGAATTT+GGG 0.318492 7:-40920479 MsaT036665.1:CDS
ACATGGCTAACCAAGACTTT+AGG 0.330248 7:-40920780 MsaT036665.1:CDS
CAACAAAATCTCTTTCAATA+TGG 0.332090 7:-40920448 MsaT036665.1:CDS
CGCAATCTGCACTATGTTCA+TGG 0.332854 7:+40918521 None:intergenic
CCATCTTCAACCGGACATTA+AGG 0.338665 7:-40919858 MsaT036665.1:intron
ATGTTCCTCTCAAACTATTT+CGG 0.338788 7:+40918607 None:intergenic
TTTGTTATTGTTTGGTGTAA+AGG 0.341775 7:+40920639 None:intergenic
CTCAAACTATTTCGGCGGTT+TGG 0.351317 7:+40918615 None:intergenic
CACCCCTGTATGAAGGGGTT+GGG 0.365445 7:+40920713 None:intergenic
GGGTTGGGATCATAGAAAAT+TGG 0.368522 7:+40920728 None:intergenic
AAAATCGCTCTGGGATCTAT+TGG 0.375361 7:+40920684 None:intergenic
ATGCATGAACACCTTAATAC+TGG 0.383219 7:-40920607 MsaT036665.1:CDS
GCGGTTCTTGATGGAGTTCT+CGG 0.397976 7:+40918677 None:intergenic
TTGTAGGAATCTTGTCCAAT+TGG 0.401670 7:-40919969 MsaT036665.1:intron
GGAGTTCCAGCGGTTCTTGA+TGG 0.404645 7:+40918668 None:intergenic
GAGTCCTTCATCATTGTGTT+GGG 0.424668 7:+40920300 None:intergenic
TGATCCCAACCCCTTCATAC+AGG 0.428255 7:-40920717 MsaT036665.1:CDS
CAAGCCAATATTTCTTGCAT+TGG 0.432718 7:-40920340 MsaT036665.1:CDS
TGTGATTGTAGAAGGATTCA+TGG 0.437635 7:-40918788 MsaT036665.1:intron
TGGTGAAACTTCACAATCTC+AGG 0.440048 7:-40920428 MsaT036665.1:CDS
GAAATATTGGCTTGAAGCCT+AGG 0.446132 7:+40920349 None:intergenic
GACTATTGATATTCAACAAA+GGG 0.460037 7:-40920239 MsaT036665.1:CDS
TGAGTCCTTCATCATTGTGT+TGG 0.460851 7:+40920299 None:intergenic
GCACCCCTGTATGAAGGGGT+TGG 0.463326 7:+40920712 None:intergenic
TAGGAATCTTGTCCAATTGG+TGG 0.464780 7:-40919966 MsaT036665.1:CDS
GGTATGGCACAATGAATTAT+GGG 0.469170 7:-40918335 MsaT036665.1:CDS
GCCAATATTTCTTGCATTGG+TGG 0.470072 7:-40920337 MsaT036665.1:CDS
CCTTAATGTCCGGTTGAAGA+TGG 0.472965 7:+40919858 None:intergenic
CCAATATTTCTTGCATTGGT+GGG 0.474835 7:-40920336 MsaT036665.1:CDS
GGCACAATGAATTATGGGTT+CGG 0.475894 7:-40918330 MsaT036665.1:CDS
AGCATTCAGACTGCGCTTAG+TGG 0.477709 7:+40918647 None:intergenic
GGGATTTCAATACAAGCAAA+AGG 0.485642 7:-40920219 MsaT036665.1:CDS
GTGTTTGCACCCCTGTATGA+AGG 0.489842 7:+40920706 None:intergenic
GAGATTGCTAAGTTTATGAA+AGG 0.495977 7:-40919917 MsaT036665.1:CDS
ATGGAGTTCTCGGTGCGTCC+AGG 0.496876 7:+40918687 None:intergenic
ACCCATCTTTGTTAGTGCCT+AGG 0.499541 7:-40920366 MsaT036665.1:CDS
ATCGAAGCTCACAAGAATGT+TGG 0.499819 7:-40918741 MsaT036665.1:CDS
ACTAGGACCAGGGTTGGTAT+TGG 0.499880 7:+40918476 None:intergenic
AATTATGGGTTCGGATCGTA+TGG 0.505058 7:-40918321 MsaT036665.1:CDS
AGCCTAGGCACTAACAAAGA+TGG 0.508071 7:+40920364 None:intergenic
TCATCATAAACTACTGATGT+TGG 0.510801 7:+40920391 None:intergenic
ATGGTACAACCATCTTCAAC+CGG 0.516159 7:-40919867 MsaT036665.1:CDS
ATGATGCTCAACGGTGATGA+AGG 0.524326 7:-40918369 MsaT036665.1:CDS
CTATGCGGAGAATGTTCAAA+AGG 0.526742 7:-40918556 MsaT036665.1:CDS
AAGTTTATGAAAGGAAGAAT+CGG 0.528877 7:-40919908 MsaT036665.1:CDS
GAAGAATCGGAAAACAGTGC+AGG 0.532629 7:-40919895 MsaT036665.1:CDS
ACTACTGATGTTGGTAGAGA+AGG 0.534133 7:+40920400 None:intergenic
TGTTTGCACCCCTGTATGAA+GGG 0.539400 7:+40920707 None:intergenic
TCAATACAAGCAAAAGGCTA+TGG 0.541281 7:-40920213 MsaT036665.1:CDS
GAAATTGCAAGTAGACTGCC+TGG 0.545133 7:-40918705 MsaT036665.1:CDS
GATCCCAACCCCTTCATACA+GGG 0.545377 7:-40920716 MsaT036665.1:CDS
GAAGGAATGACCAGTGGGTA+TGG 0.546294 7:-40918351 MsaT036665.1:CDS
GCCTAGGCACTAACAAAGAT+GGG 0.548332 7:+40920365 None:intergenic
CAGTAGAAACCCTAAAGTCT+TGG 0.550433 7:+40920770 None:intergenic
AATACCCAACACAATGATGA+AGG 0.550572 7:-40920304 MsaT036665.1:CDS
ATTCATTGTGCCATACCCAC+TGG 0.563453 7:+40918341 None:intergenic
GCTGCTCCTGTGGAAGAAGA+TGG 0.564317 7:-40918405 MsaT036665.1:CDS
AACATTACCAATACCAACCC+TGG 0.565873 7:-40918483 MsaT036665.1:CDS
TAGCCACCATCTTCTTCCAC+AGG 0.568426 7:+40918399 None:intergenic
AAAATTTGGGCTCAATAACT+GGG 0.569139 7:-40919942 MsaT036665.1:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.569754 7:-40919886 MsaT036665.1:CDS
TATGGACTTCAGATGAGGAT+AGG 0.575612 7:-40920195 MsaT036665.1:intron
AGAACTCCATCAAGAACCGC+TGG 0.579591 7:-40918674 MsaT036665.1:CDS
TGAAGGTTTCGCTGCTCCTG+TGG 0.580714 7:-40918415 MsaT036665.1:CDS
CAACAAAATCTCTTTCAACA+TGG 0.583223 7:-40920562 MsaT036665.1:CDS
ACAAGAATGTTGGAAACAAG+TGG 0.585690 7:-40918731 MsaT036665.1:CDS
TGCGCTTAGTGGAGTTCCAG+CGG 0.585896 7:+40918658 None:intergenic
TGGGTTCGGATCGTATGGAA+TGG 0.589906 7:-40918316 MsaT036665.1:CDS
AACTACTGATGTTGATAGAG+AGG 0.592028 7:+40920513 None:intergenic
AACCCTGGTCCTAGTCATGT+TGG 0.596471 7:-40918468 MsaT036665.1:CDS
AACATGACTAGGACCAGGGT+TGG 0.597563 7:+40918470 None:intergenic
ACTTCATAACCAACATGACT+AGG 0.602220 7:+40918459 None:intergenic
GAACGCCTTAATACTGACAA+AGG 0.605609 7:-40920487 MsaT036665.1:CDS
AGACTATTGATATTCAACAA+AGG 0.610503 7:-40920240 MsaT036665.1:CDS
TAACCAACATGACTAGGACC+AGG 0.610691 7:+40918465 None:intergenic
AACCGCCGAAATAGTTTGAG+AGG 0.614124 7:-40918612 MsaT036665.1:CDS
AAGAATCGGAAAACAGTGCA+GGG 0.615291 7:-40919894 MsaT036665.1:CDS
TCTTGGTTAGCCATGTTCAG+AGG 0.617854 7:+40920787 None:intergenic
TTCCTCTCAAACTATTTCGG+CGG 0.620812 7:+40918610 None:intergenic
ACTACTGATGTTGATAGAGA+GGG 0.621646 7:+40920514 None:intergenic
TAATGAACATCCTCTGAACA+TGG 0.622637 7:-40920797 MsaT036665.1:CDS
AACCAACATGACTAGGACCA+GGG 0.623604 7:+40918466 None:intergenic
GAAAATTGGTTGATATACGA+AGG 0.624664 7:+40920742 None:intergenic
GGTTATGAAGTTGCAAACAA+TGG 0.625006 7:-40918447 MsaT036665.1:CDS
GCAGTCTGAATGCTACAAGT+AGG 0.628497 7:-40918638 MsaT036665.1:CDS
GTAGGTGAAATAGTAGAACT+TGG 0.636823 7:+40920865 None:intergenic
CAAGAATGTTGGAAACAAGT+GGG 0.640431 7:-40918730 MsaT036665.1:CDS
GAAGGATTCATGGAGCGAAG+AGG 0.648775 7:-40918778 MsaT036665.1:CDS
GTTTGCACCCCTGTATGAAG+GGG 0.650629 7:+40920708 None:intergenic
AAGGCTATGGACTTCAGATG+AGG 0.659211 7:-40920200 MsaT036665.1:CDS
ATCCCAACCCCTTCATACAG+GGG 0.667776 7:-40920715 MsaT036665.1:CDS
TTCTATAGATTATCTCCATG+AGG 0.671451 7:+40918273 None:intergenic
GTGATGAAGGAATGACCAGT+GGG 0.678371 7:-40918356 MsaT036665.1:CDS
CTGGTGTAATGTGATGGTGT+AGG 0.684642 7:+40920847 None:intergenic
GCTCCTGTGGAAGAAGATGG+TGG 0.696486 7:-40918402 MsaT036665.1:CDS
GGTGATGAAGGAATGACCAG+TGG 0.697218 7:-40918357 MsaT036665.1:CDS
TATGCAGCAATGATGCTCAA+CGG 0.720991 7:-40918378 MsaT036665.1:CDS
CATTAGCGAAATCACCTATG+CGG 0.726829 7:-40918571 MsaT036665.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 40918275 40920902 40918275 ID=MsaG036665
Chr7 mRNA 40918275 40920902 40918275 ID=MsaT036665.1;Parent=MsaG036665
Chr7 exon 40918275 40918799 40918275 ID=MsaT036665.1.exon3;Parent=MsaT036665.1
Chr7 CDS 40918275 40918799 40918275 ID=cds.MsaT036665.1;Parent=MsaT036665.1
Chr7 exon 40919859 40919985 40919859 ID=MsaT036665.1.exon2;Parent=MsaT036665.1
Chr7 CDS 40919859 40919985 40919859 ID=cds.MsaT036665.1;Parent=MsaT036665.1
Chr7 exon 40920196 40920902 40920196 ID=MsaT036665.1.exon1;Parent=MsaT036665.1
Chr7 CDS 40920196 40920902 40920196 ID=cds.MsaT036665.1;Parent=MsaT036665.1
Gene Sequence

>MsaT036665.1

ATGGTTCTCTTGCAACCAAGTTCTACTATTTCACCTACACCATCACATTACACCAGTTTTTTGTACAATCAAAGCAGTCAATTTAATGAACATCCTCTGAACATGGCTAACCAAGACTTTAGGGTTTCTACTGCAGTTCCTTCGTATATCAACCAATTTTCTATGATCCCAACCCCTTCATACAGGGGTGCAAACACCAATAGATCCCAGAGCGATTTTTTCAACGACCAAATTCCAATAACCTTTACACCAAACAATAACAAAAATGAATTTATGCATGAACACCTTAATACTGGCAAAGAAATTTGGGATTTCTCCCAACAAAATCTCTTTCAACATGGTCAAACTTCACAATCTCATTTCAGTCCCTCTCTATCAACATCAGTAGTTTATGAACGCCTTAATACTGACAAAGGAATTTGGGATTTCTCCCAACAAAATCTCTTTCAATATGGTGAAACTTCACAATCTCAGGTCAGTCCTTCTCTACCAACATCAGTAGTTTATGATGAAAACCCATCTTTGTTAGTGCCTAGGCTTCAAGCCAATATTTCTTGCATTGGTGGGTTTGAAAACAATACCCAACACAATGATGAAGGACTCATCCCCATCAACCAAAAGCGTCAAAAAAGGGTTGATAAGACTATTGATATTCAACAAAGGGATTTCAATACAAGCAAAAGGCTATGGACTTCAGATGAGGATAGGAATCTTGTCCAATTGGTGGAAAAATTTGGGCTCAATAACTGGGTAGAGATTGCTAAGTTTATGAAAGGAAGAATCGGAAAACAGTGCAGGGAGAGATGGTACAACCATCTTCAACCGGACATTAAGAAGGATTCATGGAGCGAAGAGGAAGACATATTATTGATCGAAGCTCACAAGAATGTTGGAAACAAGTGGGCTGAAATTGCAAGTAGACTGCCTGGACGCACCGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGTCTGAATGCTACAAGTAGGCCAAACCGCCGAAATAGTTTGAGAGGAACATTACTTCATAATTACATTAGCGAAATCACCTATGCGGAGAATGTTCAAAAGGAGCTGACTAATTCCATGAACATAGTGCAGATTGCGAATCAGACAAATTTCAACATTACCAATACCAACCCTGGTCCTAGTCATGTTGGTTATGAAGTTGCAAACAATGGTTTTAGCTCTGAAGGTTTCGCTGCTCCTGTGGAAGAAGATGGTGGCTATGCAGCAATGATGCTCAACGGTGATGAAGGAATGACCAGTGGGTATGGCACAATGAATTATGGGTTCGGATCGTATGGAATGGAGTTTTTTCCTGAGTTTTTACCTCATGGAGATAATCTATAG

Protein sequence

>MsaT036665.1

MVLLQPSSTISPTPSHYTSFLYNQSSQFNEHPLNMANQDFRVSTAVPSYINQFSMIPTPSYRGANTNRSQSDFFNDQIPITFTPNNNKNEFMHEHLNTGKEIWDFSQQNLFQHGQTSQSHFSPSLSTSVVYERLNTDKGIWDFSQQNLFQYGETSQSQVSPSLPTSVVYDENPSLLVPRLQANISCIGGFENNTQHNDEGLIPINQKRQKRVDKTIDIQQRDFNTSKRLWTSDEDRNLVQLVEKFGLNNWVEIAKFMKGRIGKQCRERWYNHLQPDIKKDSWSEEEDILLIEAHKNVGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATSRPNRRNSLRGTLLHNYISEITYAENVQKELTNSMNIVQIANQTNFNITNTNPGPSHVGYEVANNGFSSEGFAAPVEEDGGYAAMMLNGDEGMTSGYGTMNYGFGSYGMEFFPEFLPHGDNL*