AlfalfaGEDB | MsaG036699

M. sativa ssp. caerulea / MsaG036699

KEGG: K12606 K13754
GO: GO:0000003 GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000932 GO:0000956 GO:0001932 GO:0001934 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005102 GO:0005154 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006357 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007044 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007166 GO:0007276 GO:0007283 GO:0007346 GO:0007548 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010562 GO:0010564 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0010648 GO:0010948 GO:0016043 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019220 GO:0019221 GO:0019222 GO:0019439 GO:0019899 GO:0019900 GO:0019904 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030014 GO:0030015 GO:0030330 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031570 GO:0031571 GO:0031581 GO:0032268 GO:0032269 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033135 GO:0033138 GO:0033143 GO:0033144 GO:0033146 GO:0033147 GO:0033554 GO:0034097 GO:0034243 GO:0034248 GO:0034249 GO:0034329 GO:0034330 GO:0034641 GO:0034655 GO:0035556 GO:0035770 GO:0036464 GO:0042058 GO:0042221 GO:0042325 GO:0042327 GO:0042770 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045742 GO:0045786 GO:0045787 GO:0045893 GO:0045930 GO:0045935 GO:0045937 GO:0045944 GO:0046483 GO:0046700 GO:0046983 GO:0048232 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048609 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051254 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0070851 GO:0070887 GO:0071156 GO:0071158 GO:0071310 GO:0071345 GO:0071704 GO:0071840 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0080090 GO:0090068 GO:0090304 GO:0097159 GO:1901184 GO:1901186 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902680 GO:1902806 GO:1902807 GO:1903047 GO:1903506 GO:1903508 GO:1990904 GO:2000045 GO:2000112 GO:2000113 GO:2000134 GO:2000325 GO:2000327 GO:2001141
PFAM: PF04078.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036699	XP_039683162.1	90.461	304	27	1	1	302	1	304	0.0	539

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036699	sp\|Q6P819\|CNOT9_XENTR	54.406	261	119	0	33	293	28	288	4.41e-94	283

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036699	tr\|A0A396GV60\|A0A396GV60_MEDTR	89.869	306	27	2	1	302	1	306	0.0	534

TFs/TRs:

Gene ID	Type	Classification
MsaG036699	TR	Rcd1-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000081	MsaG036699	0.825135	9.812002e-54	2.477355e-51
MsaG000234	MsaG036699	0.876371	3.065775e-68	4.687056e-65
MsaG000364	MsaG036699	0.838536	4.991904e-57	1.861577e-54
MsaG000379	MsaG036699	0.852862	6.706938e-61	4.015667e-58
MsaG000520	MsaG036699	0.859906	5.870545e-63	4.547759e-60
MsaG000583	MsaG036699	0.811191	1.357532e-50	2.386686e-48
MsaG000999	MsaG036699	0.835531	2.899114e-56	9.867002e-54
MsaG001246	MsaG036699	0.810292	2.119653e-50	3.645610e-48
MsaG001281	MsaG036699	0.821646	6.356664e-53	1.460339e-50
MsaG001283	MsaG036699	0.832328	1.820627e-55	5.635443e-53
MsaG001875	MsaG036699	0.865619	1.036339e-64	1.003507e-61
MsaG002405	MsaG036699	0.810502	1.910327e-50	3.302535e-48
MsaG002731	MsaG036699	0.897047	4.655747e-76	2.009675e-72
MsaG003089	MsaG036699	0.800597	2.237381e-48	3.066212e-46
MsaG003252	MsaG036699	0.886934	4.815732e-72	1.213642e-68
MsaG003292	MsaG036699	0.805294	2.419735e-49	3.693500e-47
MsaG003743	MsaG036699	0.857875	2.363044e-62	1.696088e-59
MsaG003750	MsaG036699	0.852425	8.924628e-61	5.262469e-58
MsaG003769	MsaG036699	0.871943	9.519211e-67	1.198281e-63
MsaG004004	MsaG036699	0.897540	2.894640e-76	1.285444e-72
MsaG003934	MsaG036699	0.806021	1.705270e-49	2.647613e-47
MsaG003938	MsaG036699	0.862656	8.605092e-64	7.409217e-61
MsaG004227	MsaG036699	0.880048	1.596048e-69	2.886713e-66
MsaG004306	MsaG036699	0.821992	5.292194e-53	1.227015e-50
MsaG004367	MsaG036699	0.823649	2.185185e-53	5.298585e-51
MsaG004465	MsaG036699	0.804175	4.133498e-49	6.147880e-47
MsaG004466	MsaG036699	0.804638	3.312901e-49	4.980452e-47
MsaG004686	MsaG036699	0.826494	4.685410e-54	1.228459e-51
MsaG004703	MsaG036699	0.812764	6.191071e-51	1.131494e-48
MsaG005348	MsaG036699	0.815269	1.744407e-51	3.395199e-49
MsaG005351	MsaG036699	0.864377	2.531896e-64	2.333321e-61
MsaG005403	MsaG036699	0.816595	8.856358e-52	1.782795e-49
MsaG005559	MsaG036699	0.826099	5.809696e-54	1.506633e-51
MsaG005598	MsaG036699	0.827204	3.175469e-54	8.491906e-52
MsaG005799	MsaG036699	0.828585	1.483481e-54	4.123992e-52
MsaG006357	MsaG036699	0.865657	1.008480e-64	9.780239e-62
MsaG006425	MsaG036699	0.861663	1.729635e-63	1.432663e-60
MsaG006526	MsaG036699	0.837117	1.150520e-56	4.107160e-54
MsaG006586	MsaG036699	0.851127	2.074130e-60	1.168673e-57
MsaG006549	MsaG036699	0.803268	6.362737e-49	9.266790e-47
MsaG006743	MsaG036699	0.901071	8.971450e-78	4.889124e-74
MsaG006910	MsaG036699	0.902859	1.468877e-78	8.898707e-75
MsaG006937	MsaG036699	0.830655	4.677194e-55	1.379150e-52
MsaG007094	MsaG036699	0.827624	2.521334e-54	6.822565e-52
MsaG007317	MsaG036699	0.896177	1.070483e-75	4.399326e-72
MsaG007585	MsaG036699	0.827386	2.872704e-54	7.721860e-52
MsaG007665	MsaG036699	0.871322	1.525051e-66	1.869153e-63
MsaG007759	MsaG036699	0.877271	1.500317e-68	2.388297e-65
MsaG008168	MsaG036699	0.878475	5.719541e-69	9.619632e-66
MsaG009172	MsaG036699	0.858965	1.122442e-62	8.390755e-60
MsaG009256	MsaG036699	0.899465	4.427398e-77	2.194970e-73
MsaG009372	MsaG036699	0.847517	2.077164e-59	1.034998e-56
MsaG009495	MsaG036699	0.830710	4.536843e-55	1.339848e-52
MsaG009864	MsaG036699	0.830755	4.422676e-55	1.307891e-52
MsaG009880	MsaG036699	0.881797	3.783850e-70	7.430145e-67
MsaG010418	MsaG036699	0.875863	4.577038e-68	6.840527e-65
MsaG010445	MsaG036699	0.836668	1.496803e-56	5.270981e-54
MsaG010621	MsaG036699	0.855441	1.218288e-61	7.997416e-59
MsaG010994	MsaG036699	0.808631	4.798537e-50	7.928500e-48
MsaG011133	MsaG036699	0.933601	4.094218e-95	2.248924e-90
MsaG011657	MsaG036699	0.831369	3.130679e-55	9.423624e-53
MsaG011650	MsaG036699	0.800487	2.355746e-48	3.220321e-46
MsaG011749	MsaG036699	0.942667	1.437413e-101	1.719279e-96
MsaG011918	MsaG036699	0.838261	5.873437e-57	2.171525e-54
MsaG012301	MsaG036699	0.824915	1.104869e-53	2.772946e-51
MsaG012438	MsaG036699	0.831852	2.382933e-55	7.275476e-53
MsaG012458	MsaG036699	0.824416	1.446850e-53	3.581942e-51
MsaG012461	MsaG036699	0.859335	8.703660e-63	6.598545e-60
MsaG012747	MsaG036699	0.821065	8.644749e-53	1.955659e-50
MsaG012774	MsaG036699	0.808679	4.686633e-50	7.752927e-48
MsaG012982	MsaG036699	0.844797	1.133724e-58	5.160472e-56
MsaG013708	MsaG036699	0.827539	2.641609e-54	7.131074e-52
MsaG013895	MsaG036699	0.827467	2.748014e-54	7.403208e-52
MsaG014043	MsaG036699	0.828732	1.367018e-54	3.815777e-52
MsaG014300	MsaG036699	0.801020	1.835666e-48	2.539728e-46
MsaG014615	MsaG036699	0.816021	1.188440e-51	2.357588e-49
MsaG014720	MsaG036699	0.802358	9.788155e-49	1.396091e-46
MsaG014726	MsaG036699	0.836935	1.279851e-56	4.543602e-54
MsaG014841	MsaG036699	0.874256	1.607596e-67	2.237662e-64
MsaG014945	MsaG036699	0.820397	1.228990e-52	2.731586e-50
MsaG015096	MsaG036699	0.834508	5.237581e-56	1.728779e-53
MsaG015113	MsaG036699	0.855788	9.663393e-62	6.422976e-59
MsaG015329	MsaG036699	0.852930	6.413535e-61	3.849395e-58
MsaG015347	MsaG036699	0.878661	4.920965e-69	8.348986e-66
MsaG015358	MsaG036699	0.858411	1.639824e-62	1.200780e-59
MsaG016387	MsaG036699	0.832296	1.853845e-55	5.732991e-53
MsaG016688	MsaG036699	0.851465	1.667161e-60	9.504262e-58
MsaG016827	MsaG036699	0.836027	2.174909e-56	7.512613e-54
MsaG016906	MsaG036699	0.807755	7.360404e-50	1.190770e-47
MsaG016972	MsaG036699	0.864825	1.836535e-64	1.723045e-61
MsaG017085	MsaG036699	0.850815	2.537924e-60	1.414732e-57
MsaG017107	MsaG036699	0.831545	2.835000e-55	8.577980e-53
MsaG017181	MsaG036699	0.853387	4.753859e-61	2.899513e-58
MsaG017380	MsaG036699	0.817870	4.590144e-52	9.548678e-50
MsaG017418	MsaG036699	0.848027	1.506114e-59	7.634705e-57
MsaG017545	MsaG036699	0.808558	4.974803e-50	8.205141e-48
MsaG017571	MsaG036699	0.858200	1.894403e-62	1.376190e-59
MsaG017802	MsaG036699	0.818217	3.835266e-52	8.050128e-50
MsaG018097	MsaG036699	0.837488	9.259998e-57	3.343450e-54
MsaG018305	MsaG036699	0.834044	6.837869e-56	2.225790e-53
MsaG018504	MsaG036699	0.855621	1.080327e-61	7.138345e-59
MsaG018726	MsaG036699	0.878316	6.497501e-69	1.085043e-65
MsaG018806	MsaG036699	0.863731	4.015947e-64	3.607405e-61
MsaG018847	MsaG036699	0.800214	2.674974e-48	3.634145e-46
MsaG018863	MsaG036699	0.819350	2.127061e-52	4.598792e-50
MsaG018919	MsaG036699	0.821633	6.402005e-53	1.470217e-50
MsaG018920	MsaG036699	0.836532	1.620138e-56	5.682109e-54
MsaG019031	MsaG036699	0.822092	5.018155e-53	1.166587e-50
MsaG019034	MsaG036699	0.833494	9.370852e-56	3.001418e-53
MsaG019214	MsaG036699	0.885836	1.245936e-71	2.973971e-68
MsaG019300	MsaG036699	0.802171	1.068955e-48	1.518093e-46
MsaG019453	MsaG036699	0.883011	1.374275e-70	2.859431e-67
MsaG019456	MsaG036699	0.810627	1.795892e-50	3.114104e-48
MsaG019492	MsaG036699	0.819755	1.720418e-52	3.759108e-50
MsaG019621	MsaG036699	0.807673	7.661340e-50	1.237005e-47
MsaG019623	MsaG036699	0.896894	5.390661e-76	2.306771e-72
MsaG019629	MsaG036699	0.817980	4.335107e-52	9.043965e-50
MsaG020016	MsaG036699	0.827573	2.592331e-54	7.004856e-52
MsaG020017	MsaG036699	0.802160	1.074443e-48	1.525488e-46
MsaG020075	MsaG036699	0.815799	1.331797e-51	2.627084e-49
MsaG020135	MsaG036699	0.851923	1.237674e-60	7.170807e-58
MsaG020312	MsaG036699	0.887284	3.549403e-72	9.104717e-69
MsaG020365	MsaG036699	0.864302	2.672207e-64	2.455438e-61
MsaG020370	MsaG036699	0.860422	4.108233e-63	3.246451e-60
MsaG020529	MsaG036699	0.816372	9.931940e-52	1.987952e-49
MsaG020578	MsaG036699	0.833904	7.406617e-56	2.401046e-53
MsaG020670	MsaG036699	0.886360	7.926733e-72	1.941341e-68
MsaG020667	MsaG036699	0.803575	5.500130e-49	8.067433e-47
MsaG021077	MsaG036699	0.820520	1.151667e-52	2.568058e-50
MsaG021079	MsaG036699	0.870282	3.339956e-66	3.916500e-63
MsaG022009	MsaG036699	0.806610	1.283215e-49	2.020405e-47
MsaG023265	MsaG036699	0.899803	3.169314e-77	1.603045e-73
MsaG023269	MsaG036699	0.879698	2.123960e-69	3.780274e-66
MsaG023817	MsaG036699	0.865449	1.172232e-64	1.127488e-61
MsaG023907	MsaG036699	0.860529	3.814225e-63	3.026322e-60
MsaG023897	MsaG036699	0.898024	1.811936e-76	8.268357e-73
MsaG023993	MsaG036699	0.884397	4.266481e-71	9.488973e-68
MsaG024058	MsaG036699	0.827116	3.331664e-54	8.887832e-52
MsaG024136	MsaG036699	0.826499	4.670516e-54	1.224743e-51
MsaG024150	MsaG036699	0.823592	2.252860e-53	5.454083e-51
MsaG024152	MsaG036699	0.859279	9.048549e-63	6.845656e-60
MsaG024360	MsaG036699	0.816078	1.154534e-51	2.293603e-49
MsaG024586	MsaG036699	0.816630	8.696592e-52	1.752203e-49
MsaG024652	MsaG036699	0.910820	2.964882e-82	2.955887e-78
MsaG025081	MsaG036699	0.896248	9.999241e-76	4.127052e-72
MsaG025160	MsaG036699	0.827344	2.940780e-54	7.895128e-52
MsaG025262	MsaG036699	0.868903	9.352892e-66	1.035318e-62
MsaG025618	MsaG036699	0.881793	3.797650e-70	7.455724e-67
MsaG025779	MsaG036699	0.809735	2.791017e-50	4.735820e-48
MsaG026848	MsaG036699	0.912241	5.971519e-83	6.536388e-79
MsaG026926	MsaG036699	0.865762	9.350040e-65	9.106592e-62
MsaG026966	MsaG036699	0.857678	2.702535e-62	1.925414e-59
MsaG027046	MsaG036699	0.818263	3.743598e-52	7.866938e-50
MsaG027054	MsaG036699	0.817024	7.104329e-52	1.446060e-49
MsaG027424	MsaG036699	0.907727	8.858700e-81	7.234377e-77
MsaG027474	MsaG036699	0.823068	2.982378e-53	7.118404e-51
MsaG027830	MsaG036699	0.802746	8.147446e-49	1.172405e-46
MsaG027999	MsaG036699	0.864026	3.255088e-64	2.958066e-61
MsaG028342	MsaG036699	0.842901	3.628961e-58	1.553327e-55
MsaG028353	MsaG036699	0.838699	4.532822e-57	1.698945e-54
MsaG028607	MsaG036699	0.844091	1.751073e-58	7.787844e-56
MsaG028850	MsaG036699	0.827712	2.401174e-54	6.513598e-52
MsaG028950	MsaG036699	0.861970	1.394931e-63	1.169372e-60
MsaG028985	MsaG036699	0.849035	7.940277e-60	4.164294e-57
MsaG029236	MsaG036699	0.926576	1.033903e-90	3.206839e-86
MsaG029813	MsaG036699	0.805137	2.608075e-49	3.966705e-47
MsaG030518	MsaG036699	0.842051	6.082669e-58	2.533685e-55
MsaG031491	MsaG036699	0.822936	3.201034e-53	7.612924e-51
MsaG032127	MsaG036699	0.828708	1.385324e-54	3.864229e-52
MsaG032378	MsaG036699	0.906482	3.359266e-80	2.533936e-76
MsaG033702	MsaG036699	0.814022	3.284506e-51	6.194909e-49
MsaG033856	MsaG036699	0.803435	5.877047e-49	8.592487e-47
MsaG033966	MsaG036699	0.836946	1.271894e-56	4.516814e-54
MsaG034790	MsaG036699	0.875683	5.273966e-68	7.817351e-65
MsaG034949	MsaG036699	0.867270	3.118882e-65	3.228921e-62
MsaG034999	MsaG036699	0.821196	8.064945e-53	1.830841e-50
MsaG035269	MsaG036699	0.901854	4.079605e-78	2.327726e-74
MsaG035275	MsaG036699	0.851743	1.391314e-60	8.009107e-58
MsaG035323	MsaG036699	0.877869	9.304744e-69	1.522159e-65
MsaG035395	MsaG036699	0.840524	1.527829e-57	6.063171e-55
MsaG035523	MsaG036699	0.819906	1.589766e-52	3.487748e-50
MsaG035558	MsaG036699	0.815209	1.798583e-51	3.495325e-49
MsaG035572	MsaG036699	0.815216	1.792741e-51	3.484525e-49
MsaG036111	MsaG036699	0.883741	7.436339e-71	1.602636e-67
MsaG036130	MsaG036699	0.894195	6.934330e-75	2.556859e-71
MsaG036131	MsaG036699	0.893828	9.765394e-75	3.529650e-71
MsaG036294	MsaG036699	0.825741	7.061181e-54	1.812958e-51
MsaG036699	MsaG036701	0.934444	1.126019e-95	6.607368e-91
MsaG036699	MsaG037805	0.836302	1.852989e-56	6.454183e-54
MsaG036699	MsaG038022	0.833062	1.199171e-55	3.792356e-53
MsaG036699	MsaG038460	0.823595	2.249070e-53	5.445447e-51
MsaG036699	MsaG038546	0.817417	5.799595e-52	1.192513e-49
MsaG036699	MsaG039591	0.879994	1.668502e-69	3.009974e-66
MsaG036699	MsaG040755	0.869856	4.596891e-66	5.294785e-63
MsaG036699	MsaG041015	0.889287	6.079051e-73	1.726204e-69
MsaG036699	MsaG041017	0.896284	9.668742e-76	3.998676e-72
MsaG036699	MsaG041018	0.837013	1.222841e-56	4.351432e-54
MsaG036699	MsaG041019	0.882453	2.192538e-70	4.440218e-67
MsaG036699	MsaG041044	0.876990	1.876933e-68	2.950483e-65
MsaG036699	MsaG041172	0.885486	1.683070e-71	3.947197e-68
MsaG036699	MsaG041230	0.871181	1.696007e-66	2.066130e-63
MsaG036699	MsaG041392	0.876232	3.420703e-68	5.197586e-65
MsaG036699	MsaG042225	0.875265	7.319223e-68	1.064902e-64
MsaG036699	MsaG042323	0.843718	2.202968e-58	9.679767e-56
MsaG036699	MsaG042543	0.816702	8.382480e-52	1.692075e-49
MsaG036699	MsaG043113	0.819756	1.719592e-52	3.757421e-50
MsaG036699	MsaG043344	0.805722	1.969877e-49	3.037029e-47
MsaG036699	MsaG043828	0.809444	3.219816e-50	5.425439e-48
MsaG036699	MsaG043967	0.809328	3.409292e-50	5.728135e-48
MsaG036699	MsaG044277	0.843205	3.014308e-58	1.302861e-55
MsaG036699	MsaG044324	0.830259	5.839565e-55	1.702590e-52
MsaG036699	MsaG045254	0.833879	7.515938e-56	2.434532e-53
MsaG036699	MsaG045283	0.824320	1.523412e-53	3.761838e-51
MsaG036699	MsaG045550	0.872299	7.255112e-67	9.273248e-64
MsaG036699	MsaG045551	0.890657	1.781442e-73	5.434235e-70
MsaG036699	MsaG045589	0.816529	9.160966e-52	1.841009e-49
MsaG036699	MsaG045753	0.813163	5.065894e-51	9.351412e-49
MsaG036699	MsaG045766	0.839207	3.353270e-57	1.276850e-54
MsaG036699	MsaG045806	0.854789	1.881275e-61	1.206188e-58
MsaG036699	MsaG046056	0.823004	3.086083e-53	7.353149e-51
MsaG036699	MsaG046276	0.884215	4.975874e-71	1.097108e-67
MsaG036699	MsaG046380	0.810371	2.038492e-50	3.512875e-48
MsaG036699	MsaG046526	0.849247	6.938529e-60	3.665317e-57
MsaG036699	MsaG046480	0.829652	8.197214e-55	2.348855e-52
MsaG036699	MsaG046609	0.800324	2.541325e-48	3.461216e-46
MsaG036699	MsaG046766	0.846744	3.376851e-59	1.639534e-56
MsaG036699	MsaG046804	0.848713	9.749313e-60	5.056863e-57
MsaG036699	MsaG046955	0.803065	7.004936e-49	1.015443e-46
MsaG036699	MsaG047079	0.803247	6.426365e-49	9.354913e-47
MsaG036699	MsaG047132	0.822443	4.161872e-53	9.767118e-51
MsaG036699	MsaG002505	0.833769	8.004469e-56	2.584626e-53
MsaG036699	MsaG002246	0.850051	4.147992e-60	2.251931e-57
MsaG036699	MsaG001256	0.817974	4.349473e-52	9.072363e-50
MsaG036699	MsaG003316	0.804049	4.389144e-49	6.509340e-47
MsaG036699	MsaG004869	0.858784	1.270466e-62	9.433339e-60
MsaG036699	MsaG001683	0.822709	3.612772e-53	8.539654e-51
MsaG036699	MsaG002306	0.837791	7.748593e-57	2.823641e-54
MsaG036699	MsaG002115	0.841841	6.908697e-58	2.858534e-55
MsaG036699	MsaG002551	0.863554	4.553728e-64	4.062350e-61
MsaG036699	MsaG001536	0.814625	2.420871e-51	4.635608e-49
MsaG036699	MsaG009684	0.828347	1.691652e-54	4.671522e-52
MsaG036699	MsaG009932	0.828780	1.331213e-54	3.720779e-52
MsaG036699	MsaG011523	0.853419	4.655030e-61	2.842582e-58
MsaG036699	MsaG014171	0.872745	5.155521e-67	6.716647e-64
MsaG036699	MsaG013507	0.872253	7.510201e-67	9.580619e-64
MsaG036699	MsaG013383	0.811647	1.081959e-50	1.923551e-48
MsaG036699	MsaG012862	0.834582	5.016915e-56	1.659674e-53
MsaG036699	MsaG013255	0.812496	7.080159e-51	1.285437e-48
MsaG036699	MsaG019459	0.846560	3.789145e-59	1.828221e-56
MsaG036699	MsaG019026	0.880145	1.475239e-69	2.680069e-66
MsaG036699	MsaG019513	0.805768	1.926607e-49	2.973514e-47
MsaG036699	MsaG022732	0.832382	1.764969e-55	5.471867e-53
MsaG036699	MsaG025840	0.848871	8.818641e-60	4.598935e-57
MsaG036699	MsaG026810	0.824671	1.260782e-53	3.143082e-51
MsaG036699	MsaG026617	0.812259	7.971807e-51	1.438748e-48
MsaG036699	MsaG027196	0.840705	1.370214e-57	5.468696e-55
MsaG036699	MsaG032143	0.879598	2.304194e-69	4.082760e-66
MsaG036699	MsaG030927	0.858959	1.127083e-62	8.423602e-60
MsaG036699	MsaG031458	0.878878	4.129216e-69	7.077493e-66
MsaG036699	MsaG031111	0.855446	1.214137e-61	7.971620e-59
MsaG036699	MsaG031373	0.845908	5.691160e-59	2.687217e-56
MsaG036699	MsaG031339	0.828953	1.209766e-54	3.397770e-52
MsaG036699	MsaG032719	0.947588	1.575765e-105	2.896529e-100
MsaG036699	MsaG030868	0.824004	1.806254e-53	4.421944e-51
MsaG036699	MsaG031245	0.826373	5.003302e-54	1.307391e-51
MsaG036699	MsaG032934	0.830784	4.352614e-55	1.288227e-52
MsaG036699	MsaG036456	0.822332	4.415944e-53	1.033286e-50
MsaG036699	MsaG037375	0.810212	2.204992e-50	3.784970e-48
MsaG036699	MsaG037635	0.806885	1.122917e-49	1.779419e-47
MsaG036699	MsaG037255	0.863504	4.719723e-64	4.201801e-61
MsaG036699	MsaG037000	0.917972	6.981719e-86	1.135826e-81
MsaG036699	MsaG037256	0.802534	9.006847e-49	1.289841e-46
MsaG036699	MsaG039370	0.802889	7.613906e-49	1.099244e-46
MsaG036699	MsaG037437	0.803386	6.015312e-49	8.784870e-47
MsaG036699	MsaG037837	0.825434	8.343824e-54	2.124039e-51
MsaG036699	MsaG037532	0.870936	2.042157e-66	2.462231e-63
MsaG036699	MsaG036656	0.862984	6.825502e-64	5.953461e-61
MsaG036699	MsaG043579	0.846193	4.764902e-59	2.271247e-56
MsaG036699	MsaG042289	0.804718	3.188961e-49	4.803004e-47
MsaG036699	MsaG047167	0.804447	3.629316e-49	5.432090e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036699	MtrunA17_Chr7g0224601	89.869	306	27	2	1	302	1	306	0.0	534
MsaG036699	MtrunA17_Chr8g0392781	56.418	335	111	2	1	300	11	345	1.27e-121	352
MsaG036699	MtrunA17_Chr3g0099561	62.409	274	103	0	28	301	26	299	2.42e-119	345
MsaG036699	MtrunA17_Chr1g0177151	66.239	234	79	0	14	247	20	253	3.65e-111	322
MsaG036699	MtrunA17_Chr5g0444621	67.157	204	67	0	68	271	60	263	5.68e-89	266
MsaG036699	MtrunA17_Chr6g0477171	67.005	197	65	0	49	245	45	241	1.22e-86	260
MsaG036699	MtrunA17_Chr3g0083811	57.759	116	49	0	176	291	1	116	5.92e-38	130
MsaG036699	MtrunA17_Chr3g0083821	67.368	95	31	0	70	164	36	130	6.48e-38	130
MsaG036699	MtrunA17_Chr5g0444631	86.792	53	7	0	102	154	4	56	1.91e-26	99.0
MsaG036699	MtrunA17_Chr6g0477181	71.429	49	14	0	1	49	11	59	2.12e-14	67.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG036699	AT3G20800.1	57.235	311	122	1	1	300	1	311	1.55e-115	336
MsaG036699	AT5G12980.1	54.074	270	124	0	22	291	29	298	1.42e-100	298
MsaG036699	AT2G32550.2	33.955	268	167	4	31	288	53	320	7.15e-39	139
MsaG036699	AT2G32550.3	34.921	252	138	4	54	288	39	281	8.03e-39	138
MsaG036699	AT2G32550.1	37.374	198	121	2	94	288	29	226	1.37e-36	131

Find 62 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGCCCAATTTGAGCATTTA+AGG	0.127092	7:-41632221	MsaT036699.1:CDS
CGGAACTTGCACCTTTATTA+TGG	0.186230	7:-41633683	MsaT036699.1:CDS
CAAGCCTTAAATGCTCAAAT+TGG	0.232859	7:+41632217	None:intergenic
TAAGAGGATTGGGTTATTTC+CGG	0.242539	7:-41633703	MsaT036699.1:intron
ATGAAGTTGCATGAAAATAT+TGG	0.267240	7:-41629075	MsaT036699.1:CDS
CCTTTATTATGGAATTCTTA+TGG	0.279542	7:-41633672	MsaT036699.1:CDS
AAGGAAATCTATGCCTTCTT+TGG	0.298112	7:+41631517	None:intergenic
AATAGAGAAACTAACAGTTT+TGG	0.311116	7:+41631436	None:intergenic
TTTGGGCTGTGGTGCTAGAT+TGG	0.341570	7:+41635293	None:intergenic
GTTCCATGGATGCCATGCTT+TGG	0.343484	7:+41635275	None:intergenic
TGAAGTTGCATGAAAATATT+GGG	0.343625	7:-41629074	MsaT036699.1:CDS
TTCCATGGATGCCATGCTTT+GGG	0.345713	7:+41635276	None:intergenic
CATAATAAAGGTGCAAGTTC+CGG	0.352274	7:+41633684	None:intergenic
GGGCTTGCAATGCATTAAAA+AGG	0.353362	7:-41630995	MsaT036699.1:CDS
CAATGTTCTGGAACTACTTC+AGG	0.355418	7:-41632871	MsaT036699.1:intron
ATTCCCTCCACCTGGTACTA+AGG	0.362304	7:+41629038	None:intergenic
CCATAAGAATTCCATAATAA+AGG	0.371929	7:+41633672	None:intergenic
AACTCGAGTGTGCAATGTTC+TGG	0.374857	7:-41632883	MsaT036699.1:CDS
AACTCAACAATCCTGATCTC+AGG	0.384176	7:-41635240	MsaT036699.1:CDS
TTGGGCTGTGGTGCTAGATT+GGG	0.395336	7:+41635294	None:intergenic
CTTGCTAGTCTTGGAGTCAT+TGG	0.399485	7:-41632198	MsaT036699.1:CDS
CATTTAAGGCTTGCTAGTCT+TGG	0.414086	7:-41632207	MsaT036699.1:CDS
TGCCTACGCAACATGGAAAT+CGG	0.417567	7:-41631470	MsaT036699.1:CDS
CTAACTCGCTTGTCGTTTGA+AGG	0.424446	7:+41632241	None:intergenic
GGATGCCATGCTTTGGGCTG+TGG	0.432887	7:+41635282	None:intergenic
TCGCTTGTCGTTTGAAGGAA+TGG	0.449153	7:+41632246	None:intergenic
TTCAATAACAAGGCGTTCCA+TGG	0.458343	7:+41635261	None:intergenic
TACTATTGAAATATTTGTAC+AGG	0.478947	7:-41633649	MsaT036699.1:intron
AAAATTATGTCAGATGATGA+TGG	0.481246	7:-41631257	MsaT036699.1:CDS
TGCTCTTCGTGTTCTCTCCA+AGG	0.482455	7:-41635212	MsaT036699.1:intron
AGCCCAAAGCATGGCATCCA+TGG	0.487495	7:-41635278	MsaT036699.1:CDS
AGATTCAACAGCGGAATAGT+AGG	0.487502	7:+41632921	None:intergenic
AAGCCTTAAATGCTCAAATT+GGG	0.502413	7:+41632218	None:intergenic
GATGGTTTGATTTATGTTTG+TGG	0.502440	7:-41631239	MsaT036699.1:CDS
TGAAAATATTGGGGTGAACC+AGG	0.503360	7:-41629064	MsaT036699.1:CDS
AAGATGAAACAACTTGGAGC+TGG	0.506447	7:-41629101	MsaT036699.1:CDS
TCACAGGTTAACACCAAAGA+AGG	0.528410	7:-41631530	MsaT036699.1:intron
TCTTGGAGTCATTGGTGCAT+TGG	0.530074	7:-41632190	MsaT036699.1:CDS
CACCTGGTACTAAGGGAACC+TGG	0.533033	7:+41629046	None:intergenic
TCCACTATGCCTACGCAACA+TGG	0.551315	7:-41631477	MsaT036699.1:CDS
TTCAGGAAGATGAAACAACT+TGG	0.555820	7:-41629107	MsaT036699.1:intron
AACCAGGTTCCCTTAGTACC+AGG	0.560044	7:-41629048	MsaT036699.1:CDS
ACTCAACAATCCTGATCTCA+GGG	0.561365	7:-41635239	MsaT036699.1:CDS
TCCATGTTGCGTAGGCATAG+TGG	0.563175	7:+41631476	None:intergenic
GATTGGGATGAAGCAGTTCG+AGG	0.563459	7:+41635310	None:intergenic
TCCGCTGTTGAATCTTACTC+AGG	0.564161	7:-41632913	MsaT036699.1:CDS
GTTCCCTTAGTACCAGGTGG+AGG	0.568228	7:-41629042	MsaT036699.1:CDS
TGCCGATTTCCATGTTGCGT+AGG	0.569945	7:+41631468	None:intergenic
TTCCCTCCACCTGGTACTAA+GGG	0.571710	7:+41629039	None:intergenic
AGATGAAACAACTTGGAGCT+GGG	0.578633	7:-41629100	MsaT036699.1:CDS
TTCCCTTAGTACCAGGTGGA+GGG	0.586677	7:-41629041	MsaT036699.1:CDS
GAATTATCTCACTTCTCAGA+AGG	0.602747	7:+41631498	None:intergenic
AGTCATTGGTGCATTGGTGA+AGG	0.613240	7:-41632184	MsaT036699.1:intron
TATCATTGATTCCCTCCACC+TGG	0.621495	7:+41629030	None:intergenic
TAGCACCACAGCCCAAAGCA+TGG	0.626075	7:-41635287	MsaT036699.1:CDS
AGTTTGATCAATTGATGTGA+AGG	0.628164	7:+41631149	None:intergenic
AACATGGTATTGGAAAGTGT+TGG	0.637520	7:-41631179	MsaT036699.1:CDS
GATTGTTGAGTTCAATAACA+AGG	0.670356	7:+41635251	None:intergenic
GAAGTTGCATGAAAATATTG+GGG	0.686036	7:-41629073	MsaT036699.1:CDS
CAGGTTCCCTTAGTACCAGG+TGG	0.694292	7:-41629045	MsaT036699.1:CDS
TGAGACAAAAGAGAATAACA+TGG	0.703854	7:+41631119	None:intergenic
GCCTGAGTAAGATTCAACAG+CGG	0.773865	7:+41632912	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	41629032	41635359	41629032	ID=MsaG036699
Chr7	mRNA	41629032	41635359	41629032	ID=MsaT036699.1;Parent=MsaG036699
Chr7	exon	41629032	41629124	41629032	ID=MsaT036699.1.exon9;Parent=MsaT036699.1
Chr7	CDS	41629032	41629124	41629032	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41630947	41631016	41630947	ID=MsaT036699.1.exon8;Parent=MsaT036699.1
Chr7	CDS	41630947	41631016	41630947	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41631110	41631300	41631110	ID=MsaT036699.1.exon7;Parent=MsaT036699.1
Chr7	CDS	41631110	41631300	41631110	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41631451	41631546	41631451	ID=MsaT036699.1.exon6;Parent=MsaT036699.1
Chr7	CDS	41631451	41631546	41631451	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41632185	41632291	41632185	ID=MsaT036699.1.exon5;Parent=MsaT036699.1
Chr7	CDS	41632185	41632291	41632185	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41632639	41632681	41632639	ID=MsaT036699.1.exon4;Parent=MsaT036699.1
Chr7	CDS	41632639	41632681	41632639	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41632872	41632961	41632872	ID=MsaT036699.1.exon3;Parent=MsaT036699.1
Chr7	CDS	41632872	41632961	41632872	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41633650	41633721	41633650	ID=MsaT036699.1.exon2;Parent=MsaT036699.1
Chr7	CDS	41633650	41633721	41633650	ID=cds.MsaT036699.1;Parent=MsaT036699.1
Chr7	exon	41635213	41635359	41635213	ID=MsaT036699.1.exon1;Parent=MsaT036699.1
Chr7	CDS	41635213	41635359	41635213	ID=cds.MsaT036699.1;Parent=MsaT036699.1

Gene Sequence

>MsaT036699.1

ATGAATAATGTTGCGTCGTTTGTAAGTCCTCGAACTGCTTCATCCCAATCTAGCACCACAGCCCAAAGCATGGCATCCATGGAACGCCTTGTTATTGAACTCAACAATCCTGATCTCAGGGAAAATGCTCTTCGTGTTCTCTCCAAGAGGATTGGGTTATTTCCGGAACTTGCACCTTTATTATGGAATTCTTATGGTACTATTGAAATATTTGTACAGGAAATAACTTCAATATATCCTACTATTCCGCTGTTGAATCTTACTCAGGCACAATCAACTCGAGTGTGCAATGTTCTGGAACTACTTCAGTGTGTGGCATCTCACCCTGATACAAAAATGTCATTTCTCAATGCTAACATGCCTTTATATTTTTATCCATTCCTTCAAACGACAAGCGAGTTAGCCCAATTTGAGCATTTAAGGCTTGCTAGTCTTGGAGTCATTGGTGCATTGGTGAAGGTTAACACCAAAGAAGGCATAGATTTCCTTCTGAGAAGTGAGATAATTCCACTATGCCTACGCAACATGGAAATCGGCAAAGAATTATCCAAAACTGTTGCAACATTTATAATTCAAAAAATTATGTCAGATGATGATGGTTTGATTTATGTTTGTGGAACAGCAGAACGTTTTTTTGCAGTAGTTCAAGTTTTGAACATGGTATTGGAAAGTGTTGGCAATCAGCCTTCACATCAATTGATCAAACTTCTGATTCCATGTTATTCTCTTTTGTCTCAACATCCTAGGGCTTGCAATGCATTAAAAAGGCGACTTCCAAACATGCTGAAAACTGTAAATTTCATCAATTGCCTTCGCGAAGATGAAACAACTTGGAGCTGGGTAATGAAGTTGCATGAAAATATTGGGGTGAACCAGGTTCCCTTAGTACCAGGTGGAGGGAATCAATGA

Protein sequence

>MsaT036699.1

MNNVASFVSPRTASSQSSTTAQSMASMERLVIELNNPDLRENALRVLSKRIGLFPELAPLLWNSYGTIEIFVQEITSIYPTIPLLNLTQAQSTRVCNVLELLQCVASHPDTKMSFLNANMPLYFYPFLQTTSELAQFEHLRLASLGVIGALVKVNTKEGIDFLLRSEIIPLCLRNMEIGKELSKTVATFIIQKIMSDDDGLIYVCGTAERFFAVVQVLNMVLESVGNQPSHQLIKLLIPCYSLLSQHPRACNALKRRLPNMLKTVNFINCLREDETTWSWVMKLHENIGVNQVPLVPGGGNQ*