Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037033 | XP_013448347.2 | 84.588 | 558 | 63 | 3 | 1 | 554 | 1 | 539 | 0.0 | 949 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037033 | sp|O82175|SUVH5_ARATH | 42.238 | 554 | 194 | 17 | 80 | 554 | 288 | 794 | 2.28e-117 | 368 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037033 | tr|A0A396H1J2|A0A396H1J2_MEDTR | 84.588 | 558 | 63 | 3 | 1 | 554 | 1 | 539 | 0.0 | 949 |
Gene ID | Type | Classification |
---|---|---|
MsaG037033 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037033 | MtrunA17_Chr7g0232811 | 84.588 | 558 | 63 | 3 | 1 | 554 | 1 | 539 | 0.0 | 949 |
MsaG037033 | MtrunA17_Chr7g0232841 | 81.932 | 559 | 65 | 6 | 1 | 554 | 1 | 528 | 0.0 | 877 |
MsaG037033 | MtrunA17_Chr7g0232981 | 77.639 | 559 | 77 | 7 | 1 | 554 | 1 | 516 | 0.0 | 820 |
MsaG037033 | MtrunA17_Chr7g0232761 | 83.154 | 279 | 42 | 2 | 1 | 279 | 1 | 274 | 5.01e-155 | 444 |
MsaG037033 | MtrunA17_Chr5g0399801 | 44.015 | 543 | 206 | 13 | 87 | 554 | 570 | 1089 | 1.51e-131 | 410 |
MsaG037033 | MtrunA17_Chr7g0232861 | 76.357 | 258 | 43 | 2 | 7 | 264 | 3 | 242 | 1.13e-130 | 381 |
MsaG037033 | MtrunA17_Chr4g0003511 | 41.929 | 539 | 222 | 11 | 87 | 554 | 534 | 1052 | 1.33e-122 | 385 |
MsaG037033 | MtrunA17_Chr4g0003501 | 41.682 | 535 | 215 | 11 | 93 | 554 | 445 | 955 | 1.14e-119 | 375 |
MsaG037033 | MtrunA17_Chr7g0232751 | 94.958 | 119 | 6 | 0 | 436 | 554 | 1 | 119 | 3.77e-77 | 239 |
MsaG037033 | MtrunA17_Chr1g0170651 | 32.343 | 572 | 244 | 17 | 78 | 554 | 23 | 546 | 2.35e-71 | 238 |
MsaG037033 | MtrunA17_Chr7g0252211 | 32.929 | 495 | 233 | 14 | 144 | 554 | 278 | 757 | 5.72e-64 | 223 |
MsaG037033 | MtrunA17_Chr3g0080761 | 30.642 | 545 | 267 | 16 | 94 | 549 | 137 | 659 | 6.06e-64 | 221 |
MsaG037033 | MtrunA17_Chr7g0232871 | 90.909 | 110 | 10 | 0 | 345 | 454 | 1 | 110 | 2.02e-63 | 203 |
MsaG037033 | MtrunA17_Chr6g0476111 | 32.749 | 513 | 244 | 16 | 126 | 554 | 199 | 694 | 2.94e-63 | 219 |
MsaG037033 | MtrunA17_Chr6g0476121 | 32.943 | 513 | 243 | 16 | 126 | 554 | 148 | 643 | 1.31e-62 | 217 |
MsaG037033 | MtrunA17_Chr8g0354821 | 31.079 | 547 | 264 | 20 | 92 | 549 | 161 | 683 | 4.96e-62 | 216 |
MsaG037033 | MtrunA17_Chr8g0368911 | 32.135 | 473 | 229 | 15 | 126 | 523 | 293 | 748 | 2.75e-61 | 216 |
MsaG037033 | MtrunA17_Chr8g0368901 | 31.315 | 479 | 225 | 16 | 126 | 523 | 300 | 755 | 6.36e-60 | 212 |
MsaG037033 | MtrunA17_Chr7g0255181 | 31.589 | 535 | 252 | 19 | 95 | 549 | 200 | 700 | 8.13e-58 | 205 |
MsaG037033 | MtrunA17_Chr8g0369301 | 32.427 | 478 | 221 | 17 | 126 | 523 | 280 | 735 | 1.71e-57 | 204 |
MsaG037033 | MtrunA17_Chr1g0163051 | 28.401 | 588 | 312 | 21 | 31 | 530 | 85 | 651 | 1.47e-54 | 195 |
MsaG037033 | MtrunA17_Chr6g0467421 | 28.908 | 467 | 241 | 15 | 129 | 523 | 115 | 562 | 3.14e-53 | 190 |
MsaG037033 | MtrunA17_Chr6g0467381 | 29.122 | 467 | 240 | 15 | 129 | 523 | 115 | 562 | 8.24e-53 | 189 |
MsaG037033 | MtrunA17_Chr6g0467531 | 29.122 | 467 | 240 | 15 | 129 | 523 | 115 | 562 | 5.63e-52 | 186 |
MsaG037033 | MtrunA17_Chr6g0467401 | 28.908 | 467 | 241 | 15 | 129 | 523 | 115 | 562 | 6.89e-51 | 183 |
MsaG037033 | MtrunA17_Chr3g0094881 | 28.383 | 532 | 263 | 21 | 76 | 523 | 124 | 621 | 4.08e-47 | 174 |
MsaG037033 | MtrunA17_Chr6g0467411 | 28.251 | 446 | 250 | 16 | 129 | 523 | 54 | 480 | 1.65e-44 | 164 |
MsaG037033 | MtrunA17_Chr1g0163041 | 28.690 | 481 | 250 | 14 | 126 | 531 | 109 | 571 | 9.51e-41 | 155 |
MsaG037033 | MtrunA17_Chr2g0306961 | 27.500 | 440 | 232 | 15 | 129 | 523 | 64 | 461 | 3.55e-37 | 143 |
MsaG037033 | MtrunA17_Chr5g0403241 | 35.859 | 198 | 91 | 5 | 359 | 554 | 1344 | 1507 | 2.47e-29 | 123 |
MsaG037033 | MtrunA17_Chr4g0075321 | 35.714 | 196 | 94 | 4 | 359 | 554 | 901 | 1064 | 8.14e-29 | 122 |
MsaG037033 | MtrunA17_Chr8g0373821 | 34.928 | 209 | 98 | 7 | 344 | 549 | 360 | 533 | 1.18e-25 | 110 |
MsaG037033 | MtrunA17_Chr1g0190311 | 29.577 | 213 | 109 | 7 | 346 | 552 | 465 | 642 | 1.79e-18 | 89.0 |
MsaG037033 | MtrunA17_Chr1g0183321 | 30.000 | 210 | 105 | 8 | 346 | 549 | 568 | 741 | 2.36e-17 | 85.9 |
MsaG037033 | MtrunA17_Chr7g0262001 | 28.934 | 197 | 101 | 7 | 359 | 549 | 534 | 697 | 2.23e-12 | 69.7 |
MsaG037033 | MtrunA17_Chr6g0460921 | 24.771 | 218 | 126 | 9 | 337 | 553 | 239 | 419 | 3.14e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037033 | AT2G35160.5 | 42.210 | 552 | 197 | 16 | 80 | 554 | 252 | 758 | 1.34e-118 | 368 |
MsaG037033 | AT2G35160.2 | 42.238 | 554 | 194 | 17 | 80 | 554 | 288 | 794 | 2.32e-118 | 368 |
MsaG037033 | AT2G35160.3 | 42.238 | 554 | 194 | 17 | 80 | 554 | 288 | 794 | 2.32e-118 | 368 |
MsaG037033 | AT2G35160.1 | 42.238 | 554 | 194 | 17 | 80 | 554 | 288 | 794 | 2.32e-118 | 368 |
MsaG037033 | AT2G35160.4 | 42.238 | 554 | 194 | 17 | 80 | 554 | 288 | 794 | 2.32e-118 | 368 |
MsaG037033 | AT2G22740.2 | 41.527 | 537 | 218 | 17 | 98 | 554 | 270 | 790 | 4.03e-112 | 352 |
MsaG037033 | AT2G22740.1 | 41.527 | 537 | 218 | 17 | 98 | 554 | 270 | 790 | 4.03e-112 | 352 |
MsaG037033 | AT5G13960.2 | 33.267 | 502 | 239 | 15 | 135 | 554 | 3 | 490 | 8.02e-63 | 214 |
MsaG037033 | AT5G13960.1 | 33.068 | 502 | 240 | 15 | 135 | 554 | 137 | 624 | 1.36e-62 | 217 |
MsaG037033 | AT1G73100.1 | 29.834 | 543 | 278 | 17 | 85 | 549 | 147 | 664 | 1.80e-59 | 209 |
MsaG037033 | AT5G04940.2 | 31.677 | 483 | 230 | 16 | 143 | 549 | 207 | 665 | 1.15e-57 | 204 |
MsaG037033 | AT5G04940.1 | 31.677 | 483 | 230 | 16 | 143 | 549 | 207 | 665 | 1.15e-57 | 204 |
MsaG037033 | AT2G33290.1 | 29.363 | 487 | 244 | 15 | 126 | 537 | 186 | 647 | 5.62e-49 | 180 |
MsaG037033 | AT2G33290.3 | 29.363 | 487 | 244 | 15 | 126 | 537 | 186 | 647 | 5.62e-49 | 180 |
MsaG037033 | AT2G33290.4 | 29.363 | 487 | 244 | 15 | 126 | 537 | 186 | 647 | 5.62e-49 | 180 |
MsaG037033 | AT2G33290.2 | 29.363 | 487 | 244 | 15 | 126 | 537 | 186 | 647 | 5.62e-49 | 180 |
MsaG037033 | AT4G13460.1 | 28.757 | 539 | 277 | 16 | 60 | 523 | 130 | 636 | 4.79e-48 | 177 |
MsaG037033 | AT4G13460.2 | 28.757 | 539 | 277 | 16 | 60 | 523 | 130 | 636 | 4.79e-48 | 177 |
MsaG037033 | AT2G24740.1 | 29.684 | 475 | 230 | 16 | 146 | 549 | 309 | 750 | 9.11e-44 | 166 |
MsaG037033 | AT1G17770.1 | 27.879 | 495 | 240 | 18 | 143 | 549 | 223 | 688 | 1.03e-41 | 160 |
MsaG037033 | AT5G47150.1 | 39.269 | 219 | 102 | 8 | 94 | 289 | 114 | 324 | 2.31e-27 | 113 |
MsaG037033 | AT5G47160.1 | 33.969 | 262 | 136 | 9 | 50 | 285 | 157 | 407 | 1.27e-24 | 106 |
MsaG037033 | AT5G47160.3 | 33.969 | 262 | 136 | 9 | 50 | 285 | 157 | 407 | 1.27e-24 | 106 |
MsaG037033 | AT5G47160.2 | 33.969 | 262 | 136 | 9 | 50 | 285 | 157 | 407 | 1.27e-24 | 106 |
MsaG037033 | AT2G23740.1 | 31.937 | 191 | 101 | 4 | 359 | 549 | 1209 | 1370 | 2.67e-23 | 105 |
MsaG037033 | AT2G23740.3 | 31.937 | 191 | 101 | 4 | 359 | 549 | 1216 | 1377 | 2.90e-23 | 105 |
MsaG037033 | AT2G23740.6 | 31.937 | 191 | 101 | 4 | 359 | 549 | 1216 | 1377 | 2.90e-23 | 105 |
MsaG037033 | AT2G23740.2 | 31.937 | 191 | 101 | 4 | 359 | 549 | 1216 | 1377 | 2.90e-23 | 105 |
MsaG037033 | AT3G04380.5 | 32.057 | 209 | 108 | 8 | 346 | 552 | 241 | 417 | 4.45e-18 | 87.4 |
MsaG037033 | AT3G04380.6 | 32.057 | 209 | 108 | 8 | 346 | 552 | 257 | 433 | 4.49e-18 | 87.4 |
MsaG037033 | AT3G04380.2 | 32.057 | 209 | 108 | 8 | 346 | 552 | 257 | 433 | 4.69e-18 | 87.4 |
MsaG037033 | AT3G04380.1 | 32.057 | 209 | 108 | 8 | 346 | 552 | 284 | 460 | 5.18e-18 | 87.4 |
MsaG037033 | AT3G04380.3 | 32.057 | 209 | 108 | 8 | 346 | 552 | 268 | 444 | 5.37e-18 | 87.4 |
MsaG037033 | AT3G04380.4 | 32.057 | 209 | 108 | 8 | 346 | 552 | 284 | 460 | 5.40e-18 | 87.4 |
MsaG037033 | AT3G03750.2 | 28.205 | 195 | 112 | 5 | 359 | 553 | 183 | 349 | 1.79e-14 | 75.5 |
MsaG037033 | AT1G04050.3 | 29.126 | 206 | 109 | 9 | 346 | 549 | 444 | 614 | 6.83e-14 | 75.1 |
MsaG037033 | AT1G04050.2 | 27.184 | 206 | 113 | 7 | 346 | 549 | 548 | 718 | 7.02e-14 | 75.1 |
MsaG037033 | AT1G04050.1 | 27.184 | 206 | 113 | 7 | 346 | 549 | 548 | 718 | 7.02e-14 | 75.1 |
MsaG037033 | AT2G23740.4 | 32.258 | 124 | 59 | 3 | 359 | 482 | 1216 | 1314 | 1.30e-12 | 71.2 |
MsaG037033 | AT2G23740.5 | 32.258 | 124 | 59 | 3 | 359 | 482 | 1216 | 1314 | 1.30e-12 | 71.2 |
MsaG037033 | AT2G05900.1 | 27.363 | 201 | 104 | 7 | 164 | 327 | 1 | 196 | 6.32e-12 | 67.4 |
Find 99 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTATAAAGTCGAATCTATT+TGG | 0.122230 | 7:+50508389 | MsaT037033.1:CDS |
TTTACCAGTTGAAGCTTCTA+AGG | 0.214214 | 7:-50508938 | None:intergenic |
GATGAGTATTTATTTAATAT+TGG | 0.247972 | 7:+50508835 | MsaT037033.1:CDS |
AACATTTCGAGCAAACAAAT+TGG | 0.261209 | 7:-50509055 | None:intergenic |
CTTGAAATGGTTTGTGTTGT+TGG | 0.272283 | 7:-50507634 | None:intergenic |
AACTTTATAATAACTCTAAT+AGG | 0.276626 | 7:-50508304 | None:intergenic |
GGAGGTAATGTCATTAATTC+TGG | 0.290555 | 7:+50508229 | MsaT037033.1:CDS |
ACCATTGATGCTGCTAAGTA+TGG | 0.290913 | 7:+50508997 | MsaT037033.1:CDS |
CGAGTAATGTATTGAAAATA+TGG | 0.296319 | 7:-50508547 | None:intergenic |
TTATAAAGTCGAATCTATTT+GGG | 0.319297 | 7:+50508390 | MsaT037033.1:CDS |
TCAGAGAATGCAATTCCTTC+TGG | 0.338329 | 7:+50508745 | MsaT037033.1:CDS |
AATTCTGGAGAATGTGATAA+AGG | 0.344872 | 7:+50508244 | MsaT037033.1:CDS |
GAATCTTCGAAAAGCCATTC+AGG | 0.347836 | 7:-50508580 | None:intergenic |
ACAAAAGTGTTCGTTTATAC+AGG | 0.350376 | 7:+50508202 | MsaT037033.1:CDS |
TCTCATTGATTACGTGATAA+AGG | 0.363505 | 7:+50508123 | MsaT037033.1:CDS |
CTCGTAACATTTATCCTGAA+TGG | 0.372209 | 7:+50508566 | MsaT037033.1:CDS |
AAGAAAGTTAAAACAACATT+AGG | 0.375506 | 7:+50507893 | MsaT037033.1:CDS |
TTTCTTGATTGGTGTTTCCT+TGG | 0.377579 | 7:-50507747 | None:intergenic |
TTCCTGTTGCAGACTTGAAA+TGG | 0.382246 | 7:-50507647 | None:intergenic |
AGGTGAGATTATTGAAGATC+AGG | 0.383100 | 7:+50508789 | MsaT037033.1:CDS |
TTGTCACCTACTTCAATTCC+AGG | 0.384331 | 7:-50508046 | None:intergenic |
AGAACCCGTGACACTTTGAT+AGG | 0.402578 | 7:-50507971 | None:intergenic |
TTCATCTATGGTTGATAGTA+AGG | 0.413030 | 7:+50508897 | MsaT037033.1:CDS |
GTGGTTAATCGTATAGATTC+TGG | 0.413281 | 7:+50508517 | MsaT037033.1:CDS |
GGTGGTGGTGCACGTGGTGG+AGG | 0.414640 | 7:+50508343 | MsaT037033.1:CDS |
TTTAAACGCAGTTTCTTGAT+TGG | 0.417146 | 7:-50507758 | None:intergenic |
GGTGAGGTGTATTGTTACTA+TGG | 0.435582 | 7:+50508364 | MsaT037033.1:CDS |
AACCATTTCAAGTCTGCAAC+AGG | 0.438779 | 7:+50507645 | MsaT037033.1:CDS |
ACATTTCGAGCAAACAAATT+GGG | 0.449844 | 7:-50509054 | None:intergenic |
ATACGATTAACCACACATAT+AGG | 0.451047 | 7:-50508508 | None:intergenic |
ATTCTGGAGAATGTGATAAA+GGG | 0.456300 | 7:+50508245 | MsaT037033.1:CDS |
CCCTCCACTCTTAAGAGCAC+AGG | 0.461039 | 7:-50508641 | None:intergenic |
GTGGGAGGAGGATTCATCTA+TGG | 0.463351 | 7:+50508885 | MsaT037033.1:CDS |
TGGCAAGAACTCAACGTTGT+TGG | 0.468798 | 7:+50508079 | MsaT037033.1:CDS |
TTTCTTTCTTCTTGAGTCAT+CGG | 0.475293 | 7:-50507876 | None:intergenic |
GATCAAGTGATTGATTCAAA+TGG | 0.480841 | 7:+50509180 | MsaT037033.1:CDS |
TTTGTGTTGTTGGTTGGTAG+TGG | 0.484782 | 7:-50507624 | None:intergenic |
ACCATACTTAGCAGCATCAA+TGG | 0.496537 | 7:-50508998 | None:intergenic |
AAAATTATTGGAAATGTCCC+TGG | 0.496911 | 7:+50508028 | MsaT037033.1:CDS |
CAACCCTTAGAAGCTTCAAC+TGG | 0.499229 | 7:+50508934 | MsaT037033.1:CDS |
AAATGGTTTGTGTTGTTGGT+TGG | 0.505226 | 7:-50507630 | None:intergenic |
CAAGACTAAGGCGAAAGGAT+GGG | 0.513493 | 7:+50508714 | MsaT037033.1:CDS |
AAACTCGGTAACGAATTTAC+CGG | 0.517987 | 7:+50507938 | MsaT037033.1:CDS |
CGTGCTCTCTGTGGAAAACT+CGG | 0.520054 | 7:+50507923 | MsaT037033.1:CDS |
ATAAAGTTTAATTCAAAGAA+CGG | 0.520311 | 7:+50508319 | MsaT037033.1:CDS |
AAGACGAAAGCATGTTATTG+TGG | 0.528019 | 7:+50509210 | MsaT037033.1:CDS |
TAGGTGACAAGTTTCAGTAT+TGG | 0.528561 | 7:+50508059 | MsaT037033.1:CDS |
TCAAGACTAAGGCGAAAGGA+TGG | 0.530216 | 7:+50508713 | MsaT037033.1:CDS |
AGAAGCTTCAACTGGTAAAG+AGG | 0.530368 | 7:+50508942 | MsaT037033.1:CDS |
GCCTGTGCTCTTAAGAGTGG+AGG | 0.530694 | 7:+50508640 | MsaT037033.1:CDS |
CAAAAGTGTTCGTTTATACA+GGG | 0.533398 | 7:+50508203 | MsaT037033.1:CDS |
TTACCAGTTGAAGCTTCTAA+GGG | 0.535885 | 7:-50508937 | None:intergenic |
GGTCAATAGTTCGTGGGAGG+AGG | 0.540429 | 7:+50508873 | MsaT037033.1:CDS |
AAGACTAAGGCGAAAGGATG+GGG | 0.542189 | 7:+50508715 | MsaT037033.1:CDS |
AATTCAAAGAACGGTGGTGG+TGG | 0.550993 | 7:+50508328 | MsaT037033.1:CDS |
GGTGGTGGTGGTGCACGTGG+TGG | 0.552190 | 7:+50508340 | MsaT037033.1:CDS |
TTTGATAGGAAGCGCGTCGC+CGG | 0.553874 | 7:-50507957 | None:intergenic |
TTTGTTATAGATATTTCCAA+TGG | 0.556582 | 7:+50508472 | MsaT037033.1:CDS |
CTAAGTATGGTAACGTGGCA+AGG | 0.558339 | 7:+50509010 | MsaT037033.1:CDS |
ATTGATGATCGATGTGATAG+TGG | 0.558469 | 7:+50508967 | MsaT037033.1:CDS |
CGCTTCCTATCAAAGTGTCA+CGG | 0.559927 | 7:+50507966 | MsaT037033.1:CDS |
ACTATCACATCGATCATCAA+TGG | 0.565161 | 7:-50508965 | None:intergenic |
TCAAAGAAACACTGAAACCA+AGG | 0.567849 | 7:+50507730 | MsaT037033.1:CDS |
TTTAATTCAAAGAACGGTGG+TGG | 0.569178 | 7:+50508325 | MsaT037033.1:CDS |
AACGGTGGTGGTGGTGCACG+TGG | 0.573546 | 7:+50508337 | MsaT037033.1:CDS |
TTTGCCTGTGCTCTTAAGAG+TGG | 0.575325 | 7:+50508637 | MsaT037033.1:CDS |
TGGTGCACGTGGTGGAGGTG+AGG | 0.581579 | 7:+50508348 | MsaT037033.1:CDS |
CCTGTGCTCTTAAGAGTGGA+GGG | 0.588175 | 7:+50508641 | MsaT037033.1:CDS |
AAAGTCAGCTCATTCATGCT+CGG | 0.596521 | 7:-50509138 | None:intergenic |
TTCACAAGGTCAATAGTTCG+TGG | 0.597547 | 7:+50508866 | MsaT037033.1:CDS |
GCTTCCTATCAAAGTGTCAC+GGG | 0.597827 | 7:+50507967 | MsaT037033.1:CDS |
GTGTTCGTTTATACAGGGGA+AGG | 0.599990 | 7:+50508208 | MsaT037033.1:CDS |
AAACGATCTTAGAGAATCAG+AGG | 0.603303 | 7:+50507813 | MsaT037033.1:CDS |
TTTACGATGATGATGATCTG+AGG | 0.605700 | 7:+50509079 | MsaT037033.1:CDS |
GAGGCAAGTTCATTCACGAT+GGG | 0.608632 | 7:+50508002 | MsaT037033.1:CDS |
AATCTCATCAATACAGTCGA+CGG | 0.610597 | 7:-50509248 | None:intergenic |
TTCGTTTATACAGGGGAAGG+AGG | 0.611584 | 7:+50508211 | MsaT037033.1:CDS |
ATGATCGATGTGATAGTGGT+AGG | 0.614728 | 7:+50508971 | MsaT037033.1:CDS |
TATTGGCAATTATATTCACA+AGG | 0.615507 | 7:+50508852 | MsaT037033.1:CDS |
TCACAAGGTCAATAGTTCGT+GGG | 0.615584 | 7:+50508867 | MsaT037033.1:CDS |
AATGTCCCTGGAATTGAAGT+AGG | 0.621360 | 7:+50508040 | MsaT037033.1:CDS |
TTGGTTGGTAGTGGAAGACG+AGG | 0.623624 | 7:-50507615 | None:intergenic |
GGTAACTTCCGTGCTCTCTG+TGG | 0.631604 | 7:+50507914 | MsaT037033.1:CDS |
TAATCGTATAGATTCTGGCA+AGG | 0.632162 | 7:+50508522 | MsaT037033.1:CDS |
AGAGGCAAGTTCATTCACGA+TGG | 0.640375 | 7:+50508001 | MsaT037033.1:CDS |
TGTCACCTACTTCAATTCCA+GGG | 0.640833 | 7:-50508045 | None:intergenic |
TCACAAATAAAACTTCCAGA+AGG | 0.644047 | 7:-50508760 | None:intergenic |
GAGTCATCGGAAATCAAAGA+CGG | 0.648104 | 7:-50507863 | None:intergenic |
CACAACGAGAGTATTGTCAA+AGG | 0.653972 | 7:+50507706 | MsaT037033.1:CDS |
AGAACATTTACGCCCAACAG+AGG | 0.655904 | 7:-50508602 | None:intergenic |
CAAGGTCAATAGTTCGTGGG+AGG | 0.659849 | 7:+50508870 | MsaT037033.1:CDS |
AAAAGTGTTCGTTTATACAG+GGG | 0.661822 | 7:+50508204 | MsaT037033.1:CDS |
AGAAGCTGTTCCTATATGTG+TGG | 0.665038 | 7:+50508498 | MsaT037033.1:CDS |
TCACGGGTTCTAAAACAAAG+AGG | 0.679698 | 7:+50507983 | MsaT037033.1:CDS |
AAGTTTAATTCAAAGAACGG+TGG | 0.694907 | 7:+50508322 | MsaT037033.1:CDS |
TGGTTGGTAGTGGAAGACGA+GGG | 0.707958 | 7:-50507614 | None:intergenic |
ACAAATTGGGAGAACAACTG+TGG | 0.712839 | 7:-50509041 | None:intergenic |
GCTGCATATAGCATGATGTG+TGG | 0.717627 | 7:-50509105 | None:intergenic |
TGCTGCTAAGTATGGTAACG+TGG | 0.728265 | 7:+50509005 | MsaT037033.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 50507599 | 50509263 | 50507599 | ID=MsaG037033 |
Chr7 | mRNA | 50507599 | 50509263 | 50507599 | ID=MsaT037033.1;Parent=MsaG037033 |
Chr7 | exon | 50507599 | 50509263 | 50507599 | ID=MsaT037033.1.exon1;Parent=MsaT037033.1 |
Chr7 | CDS | 50507599 | 50509263 | 50507599 | ID=cds.MsaT037033.1;Parent=MsaT037033.1 |
Gene Sequence |
Protein sequence |