Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037099 | XP_039682893.1 | 96.147 | 545 | 20 | 1 | 2 | 545 | 23 | 567 | 0.0 | 1088 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037099 | sp|Q9T0G7|SUVH9_ARATH | 50.095 | 525 | 218 | 11 | 35 | 542 | 141 | 638 | 6.73e-170 | 499 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037099 | tr|A0A396HFL4|A0A396HFL4_MEDTR | 96.147 | 545 | 20 | 1 | 2 | 545 | 23 | 567 | 0.0 | 1088 |
Gene ID | Type | Classification |
---|---|---|
MsaG037099 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037099 | MtrunA17_Chr6g0467421 | 96.147 | 545 | 20 | 1 | 2 | 545 | 23 | 567 | 0.0 | 1088 |
MsaG037099 | MtrunA17_Chr6g0467531 | 95.956 | 544 | 21 | 1 | 2 | 544 | 23 | 566 | 0.0 | 1056 |
MsaG037099 | MtrunA17_Chr6g0467381 | 95.780 | 545 | 22 | 1 | 2 | 545 | 23 | 567 | 0.0 | 1055 |
MsaG037099 | MtrunA17_Chr6g0467401 | 95.229 | 545 | 25 | 1 | 2 | 545 | 23 | 567 | 0.0 | 1049 |
MsaG037099 | MtrunA17_Chr6g0467411 | 89.286 | 504 | 34 | 1 | 41 | 544 | 1 | 484 | 0.0 | 922 |
MsaG037099 | MtrunA17_Chr2g0306961 | 83.689 | 515 | 35 | 3 | 31 | 545 | 1 | 466 | 0.0 | 868 |
MsaG037099 | MtrunA17_Chr3g0094881 | 76.923 | 546 | 121 | 3 | 2 | 545 | 84 | 626 | 0.0 | 857 |
MsaG037099 | MtrunA17_Chr1g0163051 | 57.942 | 554 | 189 | 10 | 2 | 542 | 124 | 646 | 0.0 | 626 |
MsaG037099 | MtrunA17_Chr8g0368901 | 51.930 | 570 | 205 | 10 | 34 | 542 | 196 | 757 | 0.0 | 575 |
MsaG037099 | MtrunA17_Chr8g0368911 | 50.977 | 563 | 214 | 11 | 34 | 542 | 196 | 750 | 0.0 | 565 |
MsaG037099 | MtrunA17_Chr8g0369301 | 52.015 | 546 | 217 | 9 | 34 | 542 | 200 | 737 | 0.0 | 561 |
MsaG037099 | MtrunA17_Chr1g0163041 | 54.406 | 522 | 206 | 9 | 34 | 542 | 63 | 565 | 0.0 | 543 |
MsaG037099 | MtrunA17_Chr7g0255181 | 37.678 | 491 | 258 | 10 | 71 | 542 | 219 | 680 | 3.35e-99 | 315 |
MsaG037099 | MtrunA17_Chr8g0354821 | 36.260 | 524 | 282 | 17 | 39 | 542 | 167 | 658 | 6.23e-91 | 293 |
MsaG037099 | MtrunA17_Chr4g0003501 | 38.034 | 468 | 248 | 13 | 88 | 540 | 484 | 924 | 1.11e-90 | 298 |
MsaG037099 | MtrunA17_Chr5g0399801 | 37.838 | 518 | 266 | 17 | 39 | 540 | 581 | 1058 | 6.05e-90 | 298 |
MsaG037099 | MtrunA17_Chr4g0003511 | 38.723 | 470 | 244 | 14 | 88 | 540 | 579 | 1021 | 1.23e-89 | 297 |
MsaG037099 | MtrunA17_Chr3g0080761 | 34.095 | 525 | 296 | 13 | 39 | 543 | 141 | 635 | 4.85e-89 | 287 |
MsaG037099 | MtrunA17_Chr6g0476111 | 34.959 | 492 | 259 | 16 | 88 | 541 | 196 | 664 | 6.79e-80 | 264 |
MsaG037099 | MtrunA17_Chr7g0252211 | 35.070 | 499 | 270 | 16 | 78 | 541 | 248 | 727 | 6.15e-79 | 263 |
MsaG037099 | MtrunA17_Chr6g0476121 | 32.399 | 571 | 313 | 18 | 13 | 541 | 74 | 613 | 8.67e-79 | 260 |
MsaG037099 | MtrunA17_Chr7g0232811 | 29.274 | 468 | 243 | 13 | 93 | 540 | 109 | 508 | 6.42e-52 | 185 |
MsaG037099 | MtrunA17_Chr1g0170651 | 32.671 | 453 | 251 | 11 | 109 | 540 | 101 | 520 | 8.77e-51 | 183 |
MsaG037099 | MtrunA17_Chr7g0232981 | 29.399 | 449 | 238 | 13 | 96 | 540 | 112 | 485 | 7.88e-44 | 162 |
MsaG037099 | MtrunA17_Chr7g0232841 | 28.145 | 469 | 233 | 16 | 93 | 540 | 112 | 497 | 4.29e-40 | 152 |
MsaG037099 | MtrunA17_Chr8g0373821 | 29.609 | 179 | 112 | 3 | 365 | 543 | 354 | 518 | 1.40e-19 | 92.0 |
MsaG037099 | MtrunA17_Chr5g0403241 | 30.000 | 180 | 113 | 3 | 359 | 537 | 1313 | 1480 | 1.27e-18 | 90.1 |
MsaG037099 | MtrunA17_Chr4g0075321 | 28.723 | 188 | 117 | 4 | 359 | 543 | 870 | 1043 | 2.33e-17 | 85.9 |
MsaG037099 | MtrunA17_Chr1g0183321 | 22.476 | 307 | 172 | 8 | 288 | 543 | 430 | 721 | 4.03e-17 | 85.1 |
MsaG037099 | MtrunA17_Chr7g0262001 | 24.214 | 318 | 167 | 12 | 279 | 542 | 379 | 676 | 1.89e-14 | 76.3 |
MsaG037099 | MtrunA17_Chr5g0448331 | 32.484 | 157 | 86 | 4 | 116 | 259 | 267 | 416 | 2.47e-14 | 75.9 |
MsaG037099 | MtrunA17_Chr7g0232861 | 32.857 | 140 | 87 | 4 | 93 | 230 | 108 | 242 | 1.04e-13 | 71.2 |
MsaG037099 | MtrunA17_Chr8g0389931 | 30.573 | 157 | 89 | 4 | 116 | 259 | 261 | 410 | 4.24e-12 | 68.9 |
MsaG037099 | MtrunA17_Chr7g0232761 | 29.730 | 148 | 95 | 3 | 96 | 240 | 128 | 269 | 3.25e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037099 | AT4G13460.1 | 50.095 | 525 | 218 | 11 | 35 | 542 | 141 | 638 | 6.85e-171 | 499 |
MsaG037099 | AT4G13460.2 | 50.095 | 525 | 218 | 11 | 35 | 542 | 141 | 638 | 6.85e-171 | 499 |
MsaG037099 | AT2G33290.1 | 48.308 | 532 | 238 | 11 | 24 | 542 | 132 | 639 | 3.80e-167 | 489 |
MsaG037099 | AT2G33290.3 | 48.308 | 532 | 238 | 11 | 24 | 542 | 132 | 639 | 3.80e-167 | 489 |
MsaG037099 | AT2G33290.4 | 48.308 | 532 | 238 | 11 | 24 | 542 | 132 | 639 | 3.80e-167 | 489 |
MsaG037099 | AT2G33290.2 | 48.308 | 532 | 238 | 11 | 24 | 542 | 132 | 639 | 3.80e-167 | 489 |
MsaG037099 | AT2G22740.2 | 34.741 | 521 | 290 | 13 | 39 | 540 | 270 | 759 | 2.77e-88 | 289 |
MsaG037099 | AT2G22740.1 | 34.741 | 521 | 290 | 13 | 39 | 540 | 270 | 759 | 2.77e-88 | 289 |
MsaG037099 | AT2G35160.5 | 34.111 | 557 | 286 | 17 | 1 | 540 | 235 | 727 | 4.44e-84 | 277 |
MsaG037099 | AT2G35160.2 | 34.111 | 557 | 286 | 17 | 1 | 540 | 271 | 763 | 8.24e-84 | 277 |
MsaG037099 | AT2G35160.3 | 34.111 | 557 | 286 | 17 | 1 | 540 | 271 | 763 | 8.24e-84 | 277 |
MsaG037099 | AT2G35160.1 | 34.111 | 557 | 286 | 17 | 1 | 540 | 271 | 763 | 8.24e-84 | 277 |
MsaG037099 | AT2G35160.4 | 34.111 | 557 | 286 | 17 | 1 | 540 | 271 | 763 | 8.24e-84 | 277 |
MsaG037099 | AT1G73100.1 | 35.484 | 527 | 292 | 17 | 40 | 542 | 137 | 639 | 7.29e-83 | 271 |
MsaG037099 | AT5G04940.2 | 34.556 | 518 | 293 | 14 | 39 | 542 | 155 | 640 | 1.78e-82 | 271 |
MsaG037099 | AT5G04940.1 | 34.556 | 518 | 293 | 14 | 39 | 542 | 155 | 640 | 1.78e-82 | 271 |
MsaG037099 | AT5G13960.1 | 34.917 | 484 | 270 | 19 | 88 | 541 | 126 | 594 | 1.95e-76 | 253 |
MsaG037099 | AT5G13960.2 | 34.989 | 463 | 257 | 18 | 109 | 541 | 12 | 460 | 7.49e-76 | 248 |
MsaG037099 | AT1G17770.1 | 34.529 | 446 | 268 | 11 | 111 | 542 | 226 | 661 | 2.98e-73 | 246 |
MsaG037099 | AT2G24740.1 | 33.394 | 554 | 299 | 18 | 8 | 542 | 222 | 724 | 6.87e-72 | 244 |
MsaG037099 | AT5G47150.1 | 35.741 | 263 | 130 | 9 | 5 | 258 | 92 | 324 | 2.18e-33 | 130 |
MsaG037099 | AT2G23740.3 | 29.553 | 291 | 149 | 10 | 284 | 541 | 1089 | 1356 | 3.23e-24 | 108 |
MsaG037099 | AT2G23740.6 | 29.553 | 291 | 149 | 10 | 284 | 541 | 1089 | 1356 | 3.23e-24 | 108 |
MsaG037099 | AT2G23740.2 | 29.553 | 291 | 149 | 10 | 284 | 541 | 1089 | 1356 | 3.23e-24 | 108 |
MsaG037099 | AT2G23740.1 | 29.553 | 291 | 149 | 10 | 284 | 541 | 1082 | 1349 | 3.31e-24 | 108 |
MsaG037099 | AT5G47160.1 | 37.569 | 181 | 95 | 6 | 85 | 255 | 236 | 408 | 1.14e-23 | 103 |
MsaG037099 | AT5G47160.3 | 37.569 | 181 | 95 | 6 | 85 | 255 | 236 | 408 | 1.14e-23 | 103 |
MsaG037099 | AT5G47160.2 | 37.569 | 181 | 95 | 6 | 85 | 255 | 236 | 408 | 1.14e-23 | 103 |
MsaG037099 | AT2G23740.4 | 30.522 | 249 | 117 | 10 | 284 | 499 | 1089 | 1314 | 3.29e-19 | 92.4 |
MsaG037099 | AT2G23740.5 | 30.522 | 249 | 117 | 10 | 284 | 499 | 1089 | 1314 | 3.29e-19 | 92.4 |
MsaG037099 | AT3G03750.2 | 27.273 | 275 | 160 | 7 | 288 | 541 | 68 | 323 | 3.71e-18 | 86.7 |
MsaG037099 | AT2G05900.1 | 37.572 | 173 | 92 | 9 | 153 | 316 | 26 | 191 | 1.18e-17 | 84.3 |
MsaG037099 | AT1G57820.1 | 30.233 | 172 | 90 | 6 | 111 | 259 | 263 | 427 | 7.60e-13 | 71.6 |
MsaG037099 | AT1G57820.3 | 30.233 | 172 | 90 | 6 | 111 | 259 | 263 | 427 | 7.60e-13 | 71.6 |
MsaG037099 | AT1G57820.2 | 30.769 | 169 | 90 | 7 | 111 | 259 | 263 | 424 | 1.38e-12 | 70.9 |
MsaG037099 | AT5G39550.1 | 30.233 | 172 | 90 | 7 | 111 | 259 | 248 | 412 | 1.36e-11 | 67.8 |
Find 123 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTTTGATCATGGTAAT+TGG | 0.179510 | 7:-51651150 | MsaT037099.1:CDS |
AGTGAATGTTGGTTTGAAAA+AGG | 0.258242 | 7:-51651979 | MsaT037099.1:CDS |
GATTCGTGTGTCGGGTTTGC+TGG | 0.262976 | 7:-51652526 | MsaT037099.1:CDS |
ACATAGGATTATCACATAAT+TGG | 0.283098 | 7:+51651854 | None:intergenic |
TTGGATGTTTCCCCATCTTA+TGG | 0.286358 | 7:-51651131 | MsaT037099.1:CDS |
AGGATCATACTACCCATCTT+AGG | 0.317543 | 7:+51651904 | None:intergenic |
TTGGCCTCTCTTAAGCATAT+TGG | 0.319702 | 7:+51651873 | None:intergenic |
AGAAACCGTGTGACACAAAA+AGG | 0.338747 | 7:-51651520 | MsaT037099.1:CDS |
CATGCTAGTATGAGTTCTAA+TGG | 0.360661 | 7:-51652243 | MsaT037099.1:CDS |
ATGAAACTAGTTGGGGAGTT+AGG | 0.362684 | 7:-51651465 | MsaT037099.1:CDS |
TATTATTCACTTCTTCTGTC+TGG | 0.364776 | 7:+51652448 | None:intergenic |
CAGAAGAAGTGAATAATAGT+AGG | 0.376433 | 7:-51652443 | MsaT037099.1:CDS |
TAGATCTAATGAAACTAGTT+GGG | 0.379002 | 7:-51651473 | MsaT037099.1:CDS |
ATAAAAGTTCCAGCTAGAAT+AGG | 0.380021 | 7:+51651433 | None:intergenic |
AACATTGGAAATGCCGCCTT+CGG | 0.382051 | 7:+51651730 | None:intergenic |
TCCAATGGGAAGGAGAATAT+TGG | 0.382212 | 7:-51651811 | MsaT037099.1:CDS |
TAAGCATATTGGCTTCCTTA+AGG | 0.394112 | 7:+51651884 | None:intergenic |
TGCGAAGGACAACTACAAAA+AGG | 0.399229 | 7:+51651547 | None:intergenic |
TAGCAGCAATCAAGTCATTT+CGG | 0.407660 | 7:+51652418 | None:intergenic |
AAATCTAAGCAGAAGATTAG+AGG | 0.410333 | 7:-51652639 | MsaT037099.1:CDS |
CAATTAGTTCTCTTTGATCA+TGG | 0.411850 | 7:-51651157 | MsaT037099.1:CDS |
TTTATAAGTTTATGTTATCA+AGG | 0.412998 | 7:-51651939 | MsaT037099.1:CDS |
TTCCTCGTCGTCATACTTTG+TGG | 0.413262 | 7:+51651700 | None:intergenic |
GTTTGATTCGATTCGTGTGT+CGG | 0.415574 | 7:-51652535 | MsaT037099.1:CDS |
GAATAGGTCTACTCAAGAAT+GGG | 0.418852 | 7:-51651311 | MsaT037099.1:CDS |
TAGTTGGGGAGTTAGGTCTT+TGG | 0.420703 | 7:-51651458 | MsaT037099.1:CDS |
CTTGATCATGGGGTAGAAGC+TGG | 0.421865 | 7:-51651067 | MsaT037099.1:CDS |
TAAAAGTTCCAGCTAGAATA+GGG | 0.427435 | 7:+51651434 | None:intergenic |
CCAGTTCCTGGTGTTTGCAT+TGG | 0.427828 | 7:-51652342 | MsaT037099.1:CDS |
CCATTGCAAATACCATAAGA+TGG | 0.432457 | 7:+51651119 | None:intergenic |
AAAATCATTGGTCCAGTTCC+TGG | 0.434098 | 7:-51652354 | MsaT037099.1:CDS |
ACATTGGAAATGCCGCCTTC+GGG | 0.434321 | 7:+51651731 | None:intergenic |
GAACAAACACATTCGGAGTT+GGG | 0.436138 | 7:+51651179 | None:intergenic |
GTCCGTATCGTGAGATGGTC+CGG | 0.436727 | 7:-51652572 | MsaT037099.1:CDS |
TGAATAGGTCTACTCAAGAA+TGG | 0.436832 | 7:-51651312 | MsaT037099.1:CDS |
TGTATAAGATAAGTGAATGT+TGG | 0.437441 | 7:-51651990 | MsaT037099.1:CDS |
GGTTCAAGGTCAACCTAAGA+TGG | 0.443665 | 7:-51651917 | MsaT037099.1:CDS |
CAAACAAAATTCTTGTTCTC+CGG | 0.445353 | 7:+51652553 | None:intergenic |
TTAGATCTAATGAAACTAGT+TGG | 0.450265 | 7:-51651474 | MsaT037099.1:CDS |
TGGTACTTCTACTACTAGTA+AGG | 0.451010 | 7:-51652031 | MsaT037099.1:CDS |
GAGTGTTCTGAATGCGTTGA+TGG | 0.451024 | 7:-51651661 | MsaT037099.1:CDS |
TGCAATATGAGATTGATGTC+AGG | 0.456152 | 7:-51652080 | MsaT037099.1:CDS |
GATGGGTAGTATGATCCTTA+AGG | 0.457082 | 7:-51651899 | MsaT037099.1:CDS |
CCATCTTATGGTATTTGCAA+TGG | 0.459327 | 7:-51651119 | MsaT037099.1:CDS |
TTTGATTCGATTCGTGTGTC+GGG | 0.459511 | 7:-51652534 | MsaT037099.1:CDS |
ACTAGTGTGGTTGTGTCTGA+TGG | 0.461191 | 7:-51652207 | MsaT037099.1:CDS |
CTTTCTGATGATATTTCCAA+TGG | 0.469201 | 7:-51651826 | MsaT037099.1:CDS |
CCAATGCAAACACCAGGAAC+TGG | 0.473895 | 7:+51652342 | None:intergenic |
CATTGCAAATACCATAAGAT+GGG | 0.474185 | 7:+51651120 | None:intergenic |
TATCATGATGTGAAAATCAT+TGG | 0.477666 | 7:-51652366 | MsaT037099.1:CDS |
AGAAGTGAAATGTGTGTGAT+TGG | 0.479419 | 7:-51652303 | MsaT037099.1:CDS |
ACCAATATTCTCCTTCCCAT+TGG | 0.482976 | 7:+51651810 | None:intergenic |
TGAACAAACACATTCGGAGT+TGG | 0.488895 | 7:+51651178 | None:intergenic |
CTCCCTAGTCAAAACTAGTC+CGG | 0.496317 | 7:+51651399 | None:intergenic |
ACTACCCCTTATAGTAAAAG+TGG | 0.498302 | 7:-51651610 | MsaT037099.1:CDS |
ACTAATTGAACAAACACATT+CGG | 0.504273 | 7:+51651172 | None:intergenic |
AAAAGGTATTAAATATAGGT+TGG | 0.507633 | 7:-51651503 | MsaT037099.1:CDS |
TCAAGACTAAGCTCTCTCAT+TGG | 0.507939 | 7:+51651085 | None:intergenic |
TCTTTGGACCCTATTCTAGC+TGG | 0.516120 | 7:-51651442 | MsaT037099.1:CDS |
CACAACCACACTAGTAGCAA+TGG | 0.516405 | 7:+51652215 | None:intergenic |
TTTATGTTATCAAGGGTTCA+AGG | 0.516545 | 7:-51651931 | MsaT037099.1:CDS |
TGTGTTTCTTCAATCATGAA+TGG | 0.517110 | 7:-51651637 | MsaT037099.1:CDS |
AGAGAGCTTAGTCTTGATCA+TGG | 0.523319 | 7:-51651079 | MsaT037099.1:CDS |
AGAGTTATGTTCACCATCCA+TGG | 0.526426 | 7:+51651360 | None:intergenic |
TACGACAGCAACACTCTGGC+GGG | 0.527576 | 7:-51652672 | MsaT037099.1:CDS |
TGATGATATTTCCAATGGGA+AGG | 0.528993 | 7:-51651821 | MsaT037099.1:CDS |
GAGAGCTTAGTCTTGATCAT+GGG | 0.530152 | 7:-51651078 | MsaT037099.1:CDS |
AGACTAAGCTCTCTCATTGG+AGG | 0.531678 | 7:+51651088 | None:intergenic |
AATCTAAGCAGAAGATTAGA+GGG | 0.532514 | 7:-51652638 | MsaT037099.1:CDS |
TACATGGTCAACCACAAGCT+GGG | 0.533174 | 7:-51652278 | MsaT037099.1:CDS |
AAATCGAAAGTAGGATATGC+GGG | 0.538131 | 7:+51651253 | None:intergenic |
ATTGATGTCAGGGTTATTCG+AGG | 0.539804 | 7:-51652069 | MsaT037099.1:CDS |
ACAACCACACTAGTAGCAAT+GGG | 0.546031 | 7:+51652216 | None:intergenic |
TATGAAGCAGGATCAGAAGT+TGG | 0.550833 | 7:-51652133 | MsaT037099.1:CDS |
GCTACTTTGATGAACGATCA+TGG | 0.552325 | 7:-51652399 | MsaT037099.1:CDS |
AGAAGAAGTGAATAATAGTA+GGG | 0.557866 | 7:-51652442 | MsaT037099.1:CDS |
TGGGCTATGACTTATATAGC+TGG | 0.560132 | 7:+51651198 | None:intergenic |
TGGCCATGGTGATATGAAGC+AGG | 0.562913 | 7:-51652145 | MsaT037099.1:CDS |
TTGATCATGGGGTAGAAGCT+GGG | 0.563836 | 7:-51651066 | MsaT037099.1:CDS |
ATGTGTGTGATTGGTTTACA+TGG | 0.563933 | 7:-51652294 | MsaT037099.1:CDS |
CTCCGGACCATCTCACGATA+CGG | 0.564668 | 7:+51652570 | None:intergenic |
TTACATGGTCAACCACAAGC+TGG | 0.564688 | 7:-51652279 | MsaT037099.1:CDS |
TCATCAGAAAGGACATACAT+AGG | 0.567324 | 7:+51651838 | None:intergenic |
TCACCGTCCGTATCGTGAGA+TGG | 0.569169 | 7:-51652577 | MsaT037099.1:CDS |
CTTTGTGGAAGCAAGAACAT+TGG | 0.569590 | 7:+51651715 | None:intergenic |
CATTGGAAATATCATCAGAA+AGG | 0.571115 | 7:+51651827 | None:intergenic |
GGAACGAGGCAACCTTGCTA+TGG | 0.574021 | 7:-51652112 | MsaT037099.1:CDS |
CCACACTAGTAGCAATGGGC+TGG | 0.574305 | 7:+51652220 | None:intergenic |
TCCAATGCAAAATCGAAAGT+AGG | 0.574831 | 7:+51651244 | None:intergenic |
TTTCTGATGATATTTCCAAT+GGG | 0.576995 | 7:-51651825 | MsaT037099.1:CDS |
GGAGACTCTATTATCTACTC+TGG | 0.577576 | 7:-51652165 | MsaT037099.1:CDS |
GCAATATGAGATTGATGTCA+GGG | 0.582106 | 7:-51652079 | MsaT037099.1:CDS |
GGATATAATGATGATGATCA+AGG | 0.586899 | 7:-51652186 | MsaT037099.1:CDS |
GAATTACGACAGCAACACTC+TGG | 0.588133 | 7:-51652676 | MsaT037099.1:CDS |
TTATAAGTTTATGTTATCAA+GGG | 0.591362 | 7:-51651938 | MsaT037099.1:CDS |
GACTAAGCTCTCTCATTGGA+GGG | 0.593113 | 7:+51651089 | None:intergenic |
GCATACTTGTCACCATAGCA+AGG | 0.603748 | 7:+51652100 | None:intergenic |
GGGAGATACTCAAATTGCAT+AGG | 0.607274 | 7:+51651751 | None:intergenic |
GTTCAAGGTCAACCTAAGAT+GGG | 0.609539 | 7:-51651916 | MsaT037099.1:CDS |
GAAGATTAGAGGGCAGAACA+AGG | 0.612660 | 7:-51652628 | MsaT037099.1:CDS |
GGAGCTTGTTCACACTGCGA+TGG | 0.614223 | 7:-51652607 | MsaT037099.1:CDS |
AGATCTAATGAAACTAGTTG+GGG | 0.616648 | 7:-51651472 | MsaT037099.1:CDS |
TCTATTATCTACTCTGGCCA+TGG | 0.620402 | 7:-51652159 | MsaT037099.1:CDS |
TTACGACAGCAACACTCTGG+CGG | 0.627834 | 7:-51652673 | MsaT037099.1:CDS |
CTACCCCTTATAGTAAAAGT+GGG | 0.630650 | 7:-51651609 | MsaT037099.1:CDS |
ACACGGTTTCTGCAATGCGA+AGG | 0.638201 | 7:+51651532 | None:intergenic |
AGAGCTTAGTCTTGATCATG+GGG | 0.638779 | 7:-51651077 | MsaT037099.1:CDS |
CATTGGATGTATCAACGATG+AGG | 0.644772 | 7:-51651228 | MsaT037099.1:CDS |
AAATAATCAATCCCAGCTTG+TGG | 0.645273 | 7:+51652267 | None:intergenic |
AAAATCGAAAGTAGGATATG+CGG | 0.648976 | 7:+51651252 | None:intergenic |
ATTGCAAATACCATAAGATG+GGG | 0.649831 | 7:+51651121 | None:intergenic |
CCAGCCCATTGCTACTAGTG+TGG | 0.654306 | 7:-51652220 | MsaT037099.1:CDS |
AATAGGTCTACTCAAGAATG+GGG | 0.657058 | 7:-51651310 | MsaT037099.1:CDS |
GAAGCCAATATGCTTAAGAG+AGG | 0.661393 | 7:-51651877 | MsaT037099.1:CDS |
ATATCACCAATGCAAACACC+AGG | 0.662349 | 7:+51652336 | None:intergenic |
GGAAGGAGAATATTGGTGTG+AGG | 0.669233 | 7:-51651804 | MsaT037099.1:CDS |
GCAATTTGAGTATCTCCCGA+AGG | 0.676490 | 7:-51651746 | MsaT037099.1:CDS |
CAGGATCAGAAGTTGGAACG+AGG | 0.676511 | 7:-51652126 | MsaT037099.1:CDS |
GATCCTGCTTCATATCACCA+TGG | 0.685147 | 7:+51652142 | None:intergenic |
GGACCATCTCACGATACGGA+CGG | 0.685403 | 7:+51652574 | None:intergenic |
ATTTGAGTATCTCCCGAAGG+CGG | 0.692509 | 7:-51651743 | MsaT037099.1:CDS |
AGGTCGTTGATTTATGAATG+CGG | 0.693955 | 7:-51651571 | MsaT037099.1:CDS |
TTCCACAAAGTATGACGACG+AGG | 0.737459 | 7:-51651702 | MsaT037099.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 51651063 | 51652700 | 51651063 | ID=MsaG037099 |
Chr7 | mRNA | 51651063 | 51652700 | 51651063 | ID=MsaT037099.1;Parent=MsaG037099 |
Chr7 | exon | 51651063 | 51652700 | 51651063 | ID=MsaT037099.1.exon1;Parent=MsaT037099.1 |
Chr7 | CDS | 51651063 | 51652700 | 51651063 | ID=cds.MsaT037099.1;Parent=MsaT037099.1 |
Gene Sequence |
Protein sequence |