AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG037100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG037100 MtrunA17_Chr7g0228531 72.269 238 57 2 204 441 204 432 3.75e-119 354
MsaG037100 MtrunA17_Chr7g0228481 70.445 247 64 2 195 441 195 432 1.37e-118 353
MsaG037100 MtrunA17_Chr7g0233151 85.465 172 25 0 270 441 1 172 2.10e-104 307
MsaG037100 MtrunA17_Chr7g0228401 53.333 255 78 5 210 425 245 497 2.09e-77 249
MsaG037100 MtrunA17_Chr1g0177901 54.502 211 75 5 230 425 4 208 2.28e-65 208
MsaG037100 MtrunA17_Chr4g0046171 71.631 141 40 0 301 441 1 141 1.32e-58 188
MsaG037100 MtrunA17_Chr4g0022361 60.116 173 66 2 1 173 83 252 1.84e-56 189
MsaG037100 MtrunA17_Chr3g0117511 70.079 127 38 0 214 340 177 303 2.44e-55 190
MsaG037100 MtrunA17_Chr4g0058991 43.874 253 99 7 219 437 208 451 6.72e-55 189
MsaG037100 MtrunA17_Chr7g0233061 51.905 210 80 8 208 415 168 358 3.19e-52 179
MsaG037100 MtrunA17_Chr5g0429661 61.905 126 46 1 219 342 121 246 6.46e-51 176
MsaG037100 MtrunA17_Chr7g0238631 60.185 108 42 1 215 321 108 215 1.47e-38 146
MsaG037100 MtrunA17_Chr7g0233161 92.647 68 5 0 204 271 283 350 3.17e-38 142
MsaG037100 MtrunA17_Chr1g0157731 55.963 109 47 1 215 322 86 194 3.57e-38 147
MsaG037100 MtrunA17_Chr3g0139671 56.881 109 46 1 215 322 80 188 5.28e-38 147
MsaG037100 MtrunA17_Chr3g0095541 56.250 160 66 3 1 159 168 324 4.88e-35 132
MsaG037100 MtrunA17_Chr4g0008551 53.922 102 47 0 218 319 36 137 6.57e-34 130
MsaG037100 MtrunA17_Chr5g0397841 57.292 96 41 0 219 314 109 204 2.57e-33 130
MsaG037100 MtrunA17_Chr8g0358601 49.425 174 84 3 1 173 48 218 1.72e-31 120
MsaG037100 MtrunA17_Chr3g0133601 48.544 103 53 0 217 319 34 136 1.81e-31 120
MsaG037100 MtrunA17_Chr5g0401731 48.673 113 58 0 207 319 2 114 3.70e-31 122
MsaG037100 MtrunA17_Chr4g0046181 82.258 62 11 0 210 271 211 272 9.98e-31 120
MsaG037100 MtrunA17_Chr4g0053431 48.544 103 53 0 217 319 2 104 1.98e-29 115
MsaG037100 MtrunA17_Chr6g0480581 47.619 105 55 0 220 324 4 108 8.04e-29 113
MsaG037100 MtrunA17_Chr5g0437321 51.000 100 49 0 217 316 16 115 1.77e-28 113
MsaG037100 MtrunA17_Chr5g0417621 47.788 113 54 1 220 327 134 246 7.29e-28 115
MsaG037100 MtrunA17_Chr4g0022901 47.525 101 52 1 220 319 15 115 1.20e-27 110
MsaG037100 MtrunA17_Chr4g0022911 46.535 101 53 1 220 319 15 115 3.35e-27 110
MsaG037100 MtrunA17_Chr6g0454921 46.602 103 55 0 214 316 9 111 3.55e-27 108
MsaG037100 MtrunA17_Chr4g0042501 48.000 100 52 0 220 319 105 204 3.86e-27 112
MsaG037100 MtrunA17_Chr4g0022931 46.535 101 53 1 220 319 15 115 1.09e-26 108
MsaG037100 MtrunA17_Chr2g0323351 45.946 111 59 1 220 329 14 124 1.46e-26 107
MsaG037100 MtrunA17_Chr3g0125801 52.000 100 48 0 220 319 16 115 3.26e-26 107
MsaG037100 MtrunA17_Chr6g0460671 46.535 101 54 0 219 319 98 198 3.75e-26 108
MsaG037100 MtrunA17_Chr4g0039971 48.544 103 51 2 220 320 15 117 6.53e-26 107
MsaG037100 MtrunA17_Chr3g0095591 50.000 136 67 1 1 136 295 429 7.76e-26 108
MsaG037100 MtrunA17_Chr7g0240821 31.532 222 128 8 223 422 6 225 9.12e-26 104
MsaG037100 MtrunA17_Chr5g0410961 31.278 227 127 6 220 418 14 239 1.25e-25 107
MsaG037100 MtrunA17_Chr1g0154031 48.571 105 52 2 220 322 78 182 1.35e-25 108
MsaG037100 MtrunA17_Chr3g0099131 47.115 104 54 1 217 319 40 143 1.72e-25 108
MsaG037100 MtrunA17_Chr2g0309911 43.564 101 56 1 220 319 13 113 1.89e-25 105
MsaG037100 MtrunA17_Chr4g0055981 48.454 97 49 1 220 315 57 153 2.17e-25 103
MsaG037100 MtrunA17_Chr3g0080861 49.524 105 51 2 220 322 39 143 2.79e-25 108
MsaG037100 MtrunA17_Chr6g0460661 45.000 100 55 0 220 319 16 115 3.39e-25 101
MsaG037100 MtrunA17_Chr7g0254261 43.651 126 62 1 203 319 63 188 3.83e-25 105
MsaG037100 MtrunA17_Chr3g0115821 38.686 137 73 3 220 345 14 150 4.02e-25 105
MsaG037100 MtrunA17_Chr4g0026751 49.618 131 65 1 1 131 290 419 4.82e-25 106
MsaG037100 MtrunA17_Chr2g0281071 46.535 101 53 1 220 319 15 115 4.86e-25 105
MsaG037100 MtrunA17_Chr8g0354661 50.476 105 50 2 220 322 39 143 5.93e-25 107
MsaG037100 MtrunA17_Chr4g0048511 45.545 101 54 1 220 319 15 115 1.01e-24 104
MsaG037100 MtrunA17_Chr8g0349261 50.000 106 46 3 220 320 15 118 1.38e-24 103
MsaG037100 MtrunA17_Chr2g0323411 45.545 101 54 1 220 319 14 114 2.08e-24 103
MsaG037100 MtrunA17_Chr8g0385321 43.103 116 60 3 210 323 8 119 2.16e-24 102
MsaG037100 MtrunA17_Chr8g0342541 42.157 102 56 2 220 319 14 114 3.66e-24 102
MsaG037100 MtrunA17_Chr4g0013361 38.065 155 81 5 220 361 12 164 4.37e-24 101
MsaG037100 MtrunA17_Chr4g0037141 46.364 110 55 2 220 328 14 120 5.68e-24 101
MsaG037100 MtrunA17_Chr5g0395281 44.660 103 55 2 220 320 14 116 5.84e-24 101
MsaG037100 MtrunA17_Chr7g0261281 45.714 105 51 3 220 320 14 116 9.55e-24 100
MsaG037100 MtrunA17_Chr1g0193371 45.192 104 53 3 220 320 14 116 1.25e-23 101
MsaG037100 MtrunA17_Chr1g0193801 43.396 106 58 2 220 323 14 119 1.29e-23 102
MsaG037100 MtrunA17_Chr8g0342521 43.137 102 55 2 220 319 14 114 1.41e-23 101
MsaG037100 MtrunA17_Chr2g0327821 47.273 110 56 2 220 328 8 116 1.47e-23 98.6
MsaG037100 MtrunA17_Chr8g0334881 48.544 103 51 2 220 320 12 114 1.88e-23 100
MsaG037100 MtrunA17_Chr4g0030881 44.737 114 55 2 220 325 9 122 2.00e-23 99.0
MsaG037100 MtrunA17_Chr4g0042671 44.660 103 55 2 220 320 14 116 2.05e-23 101
MsaG037100 MtrunA17_Chr3g0103281 42.593 108 60 2 217 322 11 118 2.08e-23 100
MsaG037100 MtrunA17_Chr3g0117091 43.137 102 55 2 220 319 14 114 2.29e-23 100
MsaG037100 MtrunA17_Chr7g0270891 43.396 106 58 2 220 323 14 119 2.55e-23 100
MsaG037100 MtrunA17_Chr3g0104491 59.722 72 23 1 270 335 17 88 2.60e-23 99.4
MsaG037100 MtrunA17_Chr2g0330041 42.157 102 56 2 220 319 14 114 2.83e-23 101
MsaG037100 MtrunA17_Chr3g0088461 45.763 118 56 3 211 320 9 126 3.07e-23 100
MsaG037100 MtrunA17_Chr1g0211161 43.137 102 55 2 220 319 15 115 3.84e-23 97.4
MsaG037100 MtrunA17_Chr7g0271241 46.392 97 49 2 220 314 14 109 4.07e-23 100
MsaG037100 MtrunA17_Chr7g0274581 42.857 98 51 2 220 314 14 109 4.50e-23 96.7
MsaG037100 MtrunA17_Chr4g0070611 45.361 97 52 1 220 315 14 110 4.79e-23 99.0
MsaG037100 MtrunA17_Chr1g0203411 46.875 96 50 1 220 314 14 109 5.05e-23 98.6
MsaG037100 MtrunA17_Chr4g0057031 47.115 104 51 3 220 320 14 116 5.41e-23 98.2
MsaG037100 MtrunA17_Chr4g0032401 44.660 103 55 2 220 320 19 121 5.97e-23 99.4
MsaG037100 MtrunA17_Chr4g0058631 41.584 101 58 1 220 319 14 114 7.36e-23 99.4
MsaG037100 MtrunA17_Chr4g0070641 45.361 97 52 1 220 315 14 110 7.51e-23 94.7
MsaG037100 MtrunA17_Chr2g0328771 44.660 103 55 2 220 320 22 124 8.54e-23 98.6
MsaG037100 MtrunA17_Chr5g0441131 44.118 102 55 2 220 319 11 112 9.41e-23 95.1
MsaG037100 MtrunA17_Chr3g0131121 44.340 106 57 2 220 323 14 119 1.00e-22 97.8
MsaG037100 MtrunA17_Chr5g0397231 45.361 97 52 1 220 315 14 110 1.03e-22 98.6
MsaG037100 MtrunA17_Chr8g0346561 46.465 99 48 2 220 315 14 110 1.06e-22 97.8
MsaG037100 MtrunA17_Chr1g0186061 45.455 110 52 3 220 327 22 125 1.08e-22 97.1
MsaG037100 MtrunA17_Chr5g0440761 43.689 103 56 2 220 320 14 116 1.13e-22 97.1
MsaG037100 MtrunA17_Chr5g0441141 43.689 103 56 2 220 320 14 116 1.24e-22 97.1
MsaG037100 MtrunA17_Chr5g0434571 47.115 104 51 3 220 320 50 152 1.29e-22 98.6
MsaG037100 MtrunA17_Chr4g0044421 43.689 103 53 2 220 319 14 114 1.41e-22 94.7
MsaG037100 MtrunA17_Chr6g0452271 42.574 101 57 1 220 319 14 114 1.42e-22 98.2
MsaG037100 MtrunA17_Chr5g0435101 43.564 101 56 1 220 319 13 113 1.58e-22 95.1
MsaG037100 MtrunA17_Chr5g0440781 43.689 103 56 2 220 320 14 116 1.77e-22 94.4
MsaG037100 MtrunA17_Chr5g0417821 44.660 103 55 2 220 320 9 111 1.79e-22 97.1
MsaG037100 MtrunA17_Chr1g0180391 36.066 183 99 6 220 388 21 199 2.14e-22 95.5
MsaG037100 MtrunA17_Chr8g0387421 44.444 108 56 2 212 315 3 110 2.17e-22 97.4
MsaG037100 MtrunA17_Chr7g0220341 34.270 178 91 6 220 389 27 186 2.27e-22 96.3
MsaG037100 MtrunA17_Chr7g0275911 44.037 109 57 2 220 327 14 119 2.33e-22 95.9
MsaG037100 MtrunA17_Chr8g0343831 45.918 98 50 2 220 315 10 106 2.35e-22 95.9
MsaG037100 MtrunA17_Chr7g0217741 44.660 103 55 2 220 320 14 116 2.60e-22 97.1
MsaG037100 MtrunA17_Chr7g0228231 45.098 102 53 2 214 313 10 110 2.79e-22 94.4
MsaG037100 MtrunA17_Chr1g0187761 43.810 105 55 3 220 321 14 117 3.19e-22 95.5
MsaG037100 MtrunA17_Chr3g0110351 46.154 104 52 3 220 320 14 116 4.03e-22 96.3
MsaG037100 MtrunA17_Chr8g0342481 40.777 103 57 3 220 319 14 115 4.18e-22 97.8
MsaG037100 MtrunA17_Chr1g0192411 44.554 101 55 1 220 319 14 114 5.76e-22 97.4
MsaG037100 MtrunA17_Chr1g0168661 47.917 96 47 2 220 313 23 117 7.04e-22 94.7
MsaG037100 MtrunA17_Chr7g0228991 43.299 97 54 1 220 315 31 127 7.04e-22 95.1
MsaG037100 MtrunA17_Chr2g0322521 40.397 151 68 5 220 367 31 162 9.07e-22 96.7
MsaG037100 MtrunA17_Chr7g0228891 36.601 153 77 5 220 369 14 149 1.03e-21 94.4
MsaG037100 MtrunA17_Chr5g0434931 41.584 101 58 1 220 319 37 137 1.12e-21 94.7
MsaG037100 MtrunA17_Chr1g0167691 43.689 103 56 2 220 320 14 116 1.23e-21 94.0
MsaG037100 MtrunA17_Chr1g0167661 42.991 107 58 2 220 323 14 120 1.56e-21 93.6
MsaG037100 MtrunA17_Chr4g0022881 40.196 102 60 1 220 320 14 115 1.56e-21 92.8
MsaG037100 MtrunA17_Chr2g0311221 45.631 103 54 2 215 315 10 112 1.65e-21 95.1
MsaG037100 MtrunA17_Chr6g0453471 43.689 103 56 2 220 320 14 116 1.74e-21 95.5
MsaG037100 MtrunA17_Chr4g0022891 40.351 114 64 3 220 331 14 125 2.75e-21 92.4
MsaG037100 MtrunA17_Chr4g0068061 41.748 103 55 2 220 319 14 114 3.10e-21 94.4
MsaG037100 MtrunA17_Chr2g0311811 39.634 164 83 2 21 184 67 214 3.18e-21 92.4
MsaG037100 MtrunA17_Chr6g0450101 44.118 102 54 2 214 313 10 110 5.72e-21 90.9
MsaG037100 MtrunA17_Chr7g0217221 44.792 96 52 1 220 314 14 109 6.26e-21 92.0
MsaG037100 MtrunA17_Chr1g0203441 39.450 109 65 1 216 323 11 119 1.38e-20 91.3
MsaG037100 MtrunA17_Chr1g0209661 42.718 103 55 3 214 313 22 123 1.49e-20 92.0
MsaG037100 MtrunA17_Chr7g0247131 53.165 79 34 2 245 320 4 82 1.66e-20 90.9
MsaG037100 MtrunA17_Chr4g0060721 42.308 104 58 2 220 321 15 118 1.73e-20 92.0
MsaG037100 MtrunA17_Chr3g0121241 40.000 110 62 2 220 328 44 150 2.00e-20 91.3
MsaG037100 MtrunA17_Chr6g0470971 38.889 108 65 1 220 326 16 123 2.18e-20 90.9
MsaG037100 MtrunA17_Chr5g0434841 35.065 154 93 3 220 371 22 170 2.72e-20 91.3
MsaG037100 MtrunA17_Chr5g0434911 39.604 101 60 1 220 319 23 123 4.25e-20 89.7
MsaG037100 MtrunA17_Chr6g0453211 42.857 98 51 2 220 314 14 109 5.71e-20 90.5
MsaG037100 MtrunA17_Chr8g0362231 41.121 107 56 1 223 329 25 124 7.67e-20 91.3
MsaG037100 MtrunA17_Chr8g0360111 36.752 117 66 2 200 315 14 123 9.32e-20 88.6
MsaG037100 MtrunA17_Chr3g0104501 69.811 53 16 0 219 271 132 184 1.06e-19 87.0
MsaG037100 MtrunA17_Chr5g0434831 33.766 154 95 3 220 371 9 157 1.36e-19 86.3
MsaG037100 MtrunA17_Chr7g0254411 42.308 104 58 2 220 321 14 117 1.95e-19 89.0
MsaG037100 MtrunA17_Chr1g0194301 43.750 96 51 2 220 313 35 129 2.01e-19 88.2
MsaG037100 MtrunA17_Chr3g0092401 40.594 101 59 1 220 319 15 115 3.56e-19 87.8
MsaG037100 MtrunA17_Chr5g0421201 35.829 187 88 6 269 438 9 180 4.98e-19 84.7
MsaG037100 MtrunA17_Chr1g0151941 38.095 126 65 4 220 342 14 129 7.63e-19 85.9
MsaG037100 MtrunA17_Chr5g0416341 39.175 97 59 0 223 319 29 125 2.04e-18 87.4
MsaG037100 MtrunA17_Chr1g0194951 40.404 99 54 2 220 315 14 110 3.20e-18 85.9
MsaG037100 MtrunA17_Chr5g0400821 40.909 110 61 3 220 325 14 123 4.44e-18 84.7
MsaG037100 MtrunA17_Chr3g0099141 43.529 85 47 1 215 298 37 121 7.31e-18 80.1
MsaG037100 MtrunA17_Chr1g0152011 39.286 112 64 3 220 327 14 125 1.16e-17 84.0
MsaG037100 MtrunA17_Chr3g0135311 40.367 109 62 3 220 325 14 122 1.18e-17 84.0
MsaG037100 MtrunA17_Chr1g0194291 35.714 112 71 1 203 313 6 117 4.28e-17 80.9
MsaG037100 MtrunA17_Chr4g0054391 41.237 97 55 2 220 314 14 110 5.34e-17 81.3
MsaG037100 MtrunA17_Chr2g0293911 37.705 122 66 3 194 313 7 120 6.46e-17 81.6
MsaG037100 MtrunA17_Chr2g0327351 39.796 98 57 2 220 315 14 111 7.34e-17 81.3
MsaG037100 MtrunA17_Chr4g0028311 38.679 106 62 3 220 322 14 119 1.18e-16 80.9
MsaG037100 MtrunA17_Chr0c18g0493731 34.783 184 115 3 4 184 213 394 1.54e-16 81.6
MsaG037100 MtrunA17_Chr4g0072751 41.837 98 55 2 220 315 14 111 1.59e-16 80.5
MsaG037100 MtrunA17_Chr4g0023391 35.036 137 85 2 51 184 259 394 1.67e-16 81.3
MsaG037100 MtrunA17_Chr5g0434901 48.485 66 34 0 253 318 9 74 4.35e-16 74.3
MsaG037100 MtrunA17_Chr4g0068921 37.815 119 68 3 207 320 10 127 6.64e-16 75.9
MsaG037100 MtrunA17_Chr6g0487491 35.455 110 61 3 220 319 14 123 8.84e-16 77.0
MsaG037100 MtrunA17_Chr7g0269831 44.444 99 50 2 220 315 14 110 1.10e-15 78.2
MsaG037100 MtrunA17_Chr7g0238651 34.821 112 68 2 220 328 7 116 1.15e-15 78.2
MsaG037100 MtrunA17_Chr6g0483051 32.812 128 83 3 188 313 35 161 1.25e-15 79.3
MsaG037100 MtrunA17_Chr6g0483051 42.553 94 53 1 220 313 120 212 1.76e-14 75.5
MsaG037100 MtrunA17_Chr7g0264641 36.275 102 63 2 220 319 14 115 1.28e-15 76.6
MsaG037100 MtrunA17_Chr2g0323321 37.500 80 49 1 220 298 13 92 5.96e-15 70.9
MsaG037100 MtrunA17_Chr4g0042611 41.333 75 43 1 220 293 14 88 1.26e-14 69.3
MsaG037100 MtrunA17_Chr6g0472821 48.515 101 42 4 4 103 242 333 2.05e-14 74.3
MsaG037100 MtrunA17_Chr7g0229101 41.667 72 40 1 249 318 2 73 4.40e-14 71.2
MsaG037100 MtrunA17_Chr3g0093811 39.726 73 42 1 249 319 12 84 2.97e-13 69.7
MsaG037100 MtrunA17_Chr8g0342531 37.975 79 46 2 220 296 14 91 6.20e-13 66.6
MsaG037100 MtrunA17_Chr8g0342471 42.308 78 41 3 220 294 14 90 6.20e-13 65.9
MsaG037100 MtrunA17_Chr7g0229131 40.299 67 40 0 253 319 8 74 6.44e-13 66.6
MsaG037100 MtrunA17_Chr8g0342511 40.000 75 42 2 220 292 14 87 1.28e-12 63.9
MsaG037100 MtrunA17_Chr8g0342461 41.026 78 42 3 220 294 14 90 1.35e-12 65.1
MsaG037100 MtrunA17_Chr5g0425591 39.506 81 47 2 220 298 11 91 1.56e-12 63.5
MsaG037100 MtrunA17_Chr7g0274481 37.647 85 52 1 221 305 8 91 2.06e-12 69.3
MsaG037100 MtrunA17_Chr5g0395221 40.000 75 44 1 220 293 14 88 2.35e-12 62.8
MsaG037100 MtrunA17_Chr5g0397691 37.975 79 49 0 220 298 7 85 1.23e-11 66.6
MsaG037100 MtrunA17_Chr2g0294811 35.065 77 45 2 220 293 14 88 3.61e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG037100 AT4G18770.1 68.852 122 38 0 219 340 216 337 7.34e-55 188
MsaG037100 AT3G27785.1 63.846 130 41 2 219 343 188 316 6.15e-50 176
MsaG037100 AT5G58850.1 48.370 184 92 2 147 330 35 215 2.23e-48 171
MsaG037100 AT5G11050.1 65.000 120 40 1 210 327 93 212 5.95e-48 170
MsaG037100 AT5G40360.1 63.393 112 41 0 220 331 158 269 3.01e-47 166
MsaG037100 AT5G11510.3 55.046 109 48 1 215 322 76 184 3.33e-38 148
MsaG037100 AT5G11510.1 55.046 109 48 1 215 322 76 184 3.33e-38 148
MsaG037100 AT5G11510.4 55.046 109 48 1 215 322 76 184 3.33e-38 148
MsaG037100 AT5G11510.5 55.046 109 48 1 215 322 76 184 3.74e-38 147
MsaG037100 AT5G11510.2 55.046 109 48 1 215 322 76 184 4.09e-38 147
MsaG037100 AT3G09370.1 58.095 105 44 0 215 319 125 229 3.41e-37 142
MsaG037100 AT3G09370.2 58.095 105 44 0 215 319 130 234 3.49e-37 142
MsaG037100 AT5G02320.1 57.944 107 44 1 215 320 122 228 3.56e-37 143
MsaG037100 AT5G02320.2 57.944 107 44 1 215 320 122 228 3.56e-37 143
MsaG037100 AT3G09370.3 58.095 105 44 0 215 319 138 242 4.35e-37 142
MsaG037100 AT5G02320.3 57.944 107 44 1 215 320 62 168 4.95e-37 141
MsaG037100 AT4G32730.5 54.128 109 49 1 215 322 82 190 2.89e-36 142
MsaG037100 AT4G32730.4 54.128 109 49 1 215 322 82 190 2.89e-36 142
MsaG037100 AT4G32730.3 54.128 109 49 1 215 322 82 190 2.89e-36 142
MsaG037100 AT4G32730.2 54.128 109 49 1 215 322 82 190 2.89e-36 142
MsaG037100 AT2G25230.1 51.240 121 59 0 220 340 26 146 3.32e-36 133
MsaG037100 AT4G32730.1 54.128 109 49 1 215 322 82 190 3.65e-36 142
MsaG037100 AT5G40430.1 45.588 136 71 2 220 353 54 188 6.71e-34 128
MsaG037100 AT3G09230.1 52.427 103 49 0 217 319 52 154 1.03e-30 122
MsaG037100 AT4G00540.2 50.806 124 52 3 206 320 84 207 1.26e-30 122
MsaG037100 AT4G33450.1 47.934 121 61 1 206 326 5 123 2.36e-30 118
MsaG037100 AT3G55730.1 48.214 112 58 0 218 329 54 165 2.61e-30 121
MsaG037100 AT4G00540.1 50.806 124 52 3 206 320 82 205 3.95e-30 121
MsaG037100 AT1G17950.1 43.382 136 72 2 220 352 5 138 3.21e-29 115
MsaG037100 AT1G69560.2 44.538 119 66 0 220 338 123 241 1.61e-28 115
MsaG037100 AT1G69560.1 44.538 119 66 0 220 338 107 225 1.83e-28 115
MsaG037100 AT4G37260.1 48.598 107 55 0 213 319 6 112 1.71e-27 112
MsaG037100 AT1G26780.2 50.000 100 50 0 220 319 98 197 1.73e-27 112
MsaG037100 AT1G26780.1 50.000 100 50 0 220 319 98 197 1.82e-27 111
MsaG037100 AT5G17800.1 52.000 100 48 0 220 319 93 192 1.88e-27 112
MsaG037100 AT2G26950.1 45.872 109 50 2 220 323 18 122 3.00e-27 112
MsaG037100 AT2G26960.1 50.000 102 50 1 220 320 22 123 3.67e-27 113
MsaG037100 AT3G11440.2 48.571 105 52 2 220 322 43 147 5.03e-27 113
MsaG037100 AT2G23290.1 48.598 107 55 0 213 319 6 112 5.08e-27 110
MsaG037100 AT3G11440.3 48.571 105 52 2 220 322 43 147 1.39e-26 112
MsaG037100 AT3G11440.4 48.571 105 52 2 220 322 43 147 1.39e-26 112
MsaG037100 AT3G11440.1 48.571 105 52 2 220 322 43 147 1.39e-26 112
MsaG037100 AT5G67300.1 43.750 112 63 0 217 328 3 114 1.46e-26 109
MsaG037100 AT5G14750.1 50.000 98 46 2 220 315 18 114 4.18e-26 105
MsaG037100 AT2G39880.1 43.519 108 61 0 217 324 47 154 5.47e-26 108
MsaG037100 AT3G50060.1 43.689 103 58 0 217 319 3 105 6.06e-26 107
MsaG037100 AT4G26930.1 47.059 102 53 1 220 320 21 122 7.16e-26 108
MsaG037100 AT1G74430.1 44.340 106 58 1 220 324 14 119 8.28e-26 106
MsaG037100 AT3G28470.1 47.423 97 50 1 220 315 14 110 1.02e-25 107
MsaG037100 AT5G55020.1 48.039 102 52 1 220 320 28 129 1.03e-25 110
MsaG037100 AT1G57560.1 34.500 200 108 6 220 407 14 202 1.18e-25 107
MsaG037100 AT3G29020.2 45.000 100 55 0 220 319 67 166 2.33e-25 105
MsaG037100 AT5G40330.1 47.959 98 48 2 220 315 14 110 2.34e-25 103
MsaG037100 AT5G06100.1 46.667 105 54 2 220 322 34 138 2.45e-25 108
MsaG037100 AT3G29020.1 45.000 100 55 0 220 319 65 164 2.49e-25 103
MsaG037100 AT2G32460.1 48.544 103 48 2 220 319 20 120 2.82e-25 108
MsaG037100 AT2G32460.2 48.544 103 48 2 220 319 8 108 3.06e-25 108
MsaG037100 AT4G28110.1 46.535 101 53 1 220 319 14 114 4.74e-25 104
MsaG037100 AT5G06100.5 46.667 105 54 2 220 322 34 138 5.19e-25 107
MsaG037100 AT5G06100.2 46.667 105 54 2 220 322 34 138 5.19e-25 107
MsaG037100 AT5G06100.3 46.667 105 54 2 220 322 34 138 5.19e-25 107
MsaG037100 AT5G06100.4 46.667 105 54 2 220 322 34 138 5.19e-25 107
MsaG037100 AT3G27920.1 47.959 98 48 2 220 315 16 112 6.86e-25 102
MsaG037100 AT1G73410.1 50.000 100 50 0 220 319 6 105 1.17e-24 102
MsaG037100 AT4G21440.1 47.525 101 52 1 220 319 14 114 1.27e-24 104
MsaG037100 AT1G73410.2 50.000 100 50 0 220 319 6 105 1.28e-24 101
MsaG037100 AT3G61250.1 50.000 104 48 3 220 320 14 116 1.67e-24 103
MsaG037100 AT4G05100.1 46.535 101 53 1 220 319 15 115 1.98e-24 103
MsaG037100 AT5G16770.4 46.535 101 53 1 220 319 14 114 3.34e-24 102
MsaG037100 AT5G16770.3 46.535 101 53 1 220 319 14 114 3.34e-24 102
MsaG037100 AT3G12720.1 44.118 102 54 2 220 319 24 124 3.64e-24 102
MsaG037100 AT4G38620.1 47.273 110 54 2 220 328 14 120 3.69e-24 102
MsaG037100 AT5G16770.1 46.535 101 53 1 220 319 14 114 3.81e-24 103
MsaG037100 AT5G16770.2 46.535 101 53 1 220 319 14 114 3.81e-24 103
MsaG037100 AT5G59780.3 46.789 109 56 2 220 327 10 117 4.49e-24 100
MsaG037100 AT1G22640.1 48.077 104 50 3 220 320 14 116 5.51e-24 100
MsaG037100 AT3G46130.1 47.706 109 55 2 220 327 11 118 6.65e-24 100
MsaG037100 AT1G18570.1 47.573 103 52 2 220 320 15 117 1.17e-23 102
MsaG037100 AT1G09540.1 35.294 187 110 6 220 403 14 192 1.29e-23 102
MsaG037100 AT5G10280.1 46.154 104 52 3 220 320 14 116 1.63e-23 101
MsaG037100 AT5G52600.1 42.735 117 63 3 220 333 14 129 1.65e-23 98.2
MsaG037100 AT3G13890.2 40.594 101 59 1 220 319 14 114 1.75e-23 101
MsaG037100 AT3G13890.1 38.182 110 58 1 220 319 14 123 2.08e-23 101
MsaG037100 AT5G12870.1 47.573 103 52 2 220 320 20 122 2.17e-23 99.8
MsaG037100 AT5G35550.1 46.078 102 52 2 220 319 16 116 2.28e-23 99.4
MsaG037100 AT3G02940.2 45.545 101 54 1 220 319 14 114 2.31e-23 100
MsaG037100 AT5G26660.1 36.478 159 93 5 220 373 14 169 3.13e-23 100
MsaG037100 AT1G57560.2 43.925 107 56 3 220 323 14 119 3.14e-23 99.4
MsaG037100 AT3G02940.1 45.545 101 54 1 220 319 14 114 3.87e-23 99.8
MsaG037100 AT3G02940.3 45.545 101 54 1 220 319 14 114 3.87e-23 99.8
MsaG037100 AT5G54230.1 47.115 104 51 3 220 320 14 116 4.25e-23 99.8
MsaG037100 AT4G09460.1 32.212 208 107 7 220 424 14 190 4.70e-23 97.8
MsaG037100 AT3G30210.1 37.975 158 92 3 220 372 29 185 5.99e-23 98.6
MsaG037100 AT4G01680.1 38.621 145 73 5 220 356 14 150 6.22e-23 99.8
MsaG037100 AT4G01680.3 38.621 145 73 5 220 356 14 150 7.03e-23 97.4
MsaG037100 AT4G12350.1 45.192 104 53 3 220 320 14 116 7.99e-23 98.2
MsaG037100 AT3G08500.1 45.794 107 56 2 216 320 28 134 9.35e-23 99.4
MsaG037100 AT5G65230.1 42.574 101 57 1 220 319 14 114 1.16e-22 98.2
MsaG037100 AT3G60460.1 46.602 103 53 2 220 320 13 115 1.33e-22 97.8
MsaG037100 AT2G16720.1 46.296 108 52 3 220 323 14 119 1.62e-22 97.1
MsaG037100 AT1G74080.1 43.396 106 59 1 220 324 14 119 1.64e-22 98.2
MsaG037100 AT3G13540.1 41.748 103 55 2 220 319 25 125 1.93e-22 96.3
MsaG037100 AT1G34670.1 42.574 101 57 1 220 319 14 114 2.34e-22 98.6
MsaG037100 AT3G23250.1 44.762 105 52 3 220 320 14 116 2.37e-22 97.1
MsaG037100 AT1G35515.1 42.727 110 59 2 220 328 14 120 2.40e-22 95.1
MsaG037100 AT3G24310.1 43.333 120 60 3 220 332 20 138 2.68e-22 96.3
MsaG037100 AT4G01680.2 36.306 157 72 5 220 356 14 162 2.69e-22 97.8
MsaG037100 AT2G47190.1 33.974 156 93 4 202 349 4 157 2.82e-22 96.3
MsaG037100 AT1G66230.1 46.154 104 52 3 220 320 14 116 3.22e-22 96.7
MsaG037100 AT1G06180.1 44.762 105 54 3 220 321 14 117 3.51e-22 95.5
MsaG037100 AT2G31180.1 41.176 119 66 3 220 334 14 132 4.49e-22 95.5
MsaG037100 AT4G22680.1 46.154 104 52 3 220 320 14 116 4.51e-22 95.9
MsaG037100 AT4G13480.1 42.017 119 66 2 220 336 8 125 9.80e-22 94.7
MsaG037100 AT1G56160.1 43.636 110 57 4 215 320 10 118 1.08e-21 95.1
MsaG037100 AT5G56110.1 42.857 105 58 2 220 322 14 118 1.24e-21 95.5
MsaG037100 AT3G48920.1 42.609 115 64 2 206 319 7 120 1.26e-21 94.4
MsaG037100 AT4G17785.2 40.594 101 59 1 220 319 15 115 1.30e-21 95.9
MsaG037100 AT4G17785.1 40.594 101 59 1 220 319 15 115 1.50e-21 95.9
MsaG037100 AT5G07690.1 44.118 102 56 1 220 320 14 115 1.93e-21 95.1
MsaG037100 AT3G53200.1 41.525 118 65 3 214 329 5 120 2.09e-21 93.2
MsaG037100 AT1G63910.1 44.330 97 53 1 220 315 14 110 2.54e-21 95.5
MsaG037100 AT1G66370.1 43.299 97 54 1 220 315 10 106 3.00e-21 92.8
MsaG037100 AT5G62470.1 42.157 102 58 1 220 320 14 115 3.34e-21 94.7
MsaG037100 AT5G61420.2 45.631 103 54 2 220 320 14 116 3.51e-21 95.1
MsaG037100 AT4G34990.1 44.660 103 55 2 220 320 14 116 3.52e-21 93.2
MsaG037100 AT3G01140.2 43.689 103 56 2 220 320 14 116 3.57e-21 94.7
MsaG037100 AT3G01140.1 43.689 103 56 2 220 320 57 159 3.66e-21 95.1
MsaG037100 AT5G39700.1 37.121 132 76 2 196 320 25 156 4.21e-21 90.9
MsaG037100 AT5G14340.1 42.342 111 58 3 220 328 26 132 4.70e-21 93.2
MsaG037100 AT1G18710.1 39.623 106 62 2 220 323 14 119 4.77e-21 92.8
MsaG037100 AT5G07700.1 44.660 103 55 2 220 320 14 116 5.47e-21 94.0
MsaG037100 AT5G07700.2 44.660 103 55 2 220 320 14 116 5.47e-21 94.0
MsaG037100 AT5G15310.1 42.718 103 57 2 220 320 14 116 6.28e-21 93.6
MsaG037100 AT5G15310.2 42.718 103 57 2 220 320 14 116 6.64e-21 93.2
MsaG037100 AT5G15310.4 42.718 103 57 2 220 320 14 116 1.16e-20 91.3
MsaG037100 AT5G60890.1 43.396 106 58 2 220 323 14 119 1.53e-20 92.0
MsaG037100 AT5G26660.2 35.374 147 79 4 230 373 5 138 1.59e-20 92.4
MsaG037100 AT3G01530.1 44.118 102 54 2 220 319 27 127 1.86e-20 89.7
MsaG037100 AT1G79180.1 43.810 105 53 3 220 320 16 118 2.61e-20 91.3
MsaG037100 AT5G16600.1 45.192 104 53 3 220 320 14 116 2.80e-20 91.7
MsaG037100 AT5G40350.1 44.792 96 50 2 220 313 19 113 4.84e-20 88.6
MsaG037100 AT1G25340.1 45.918 98 50 2 218 313 18 114 5.47e-20 90.1
MsaG037100 AT1G74650.1 43.689 103 56 2 220 320 14 116 6.67e-20 90.9
MsaG037100 AT1G16490.1 40.741 108 58 3 220 323 16 121 6.68e-20 89.7
MsaG037100 AT3G27810.1 44.792 96 50 2 220 313 22 116 7.55e-20 88.6
MsaG037100 AT3G47600.1 41.748 103 58 2 220 320 14 116 7.99e-20 90.5
MsaG037100 AT5G62470.2 41.748 103 58 2 220 320 14 116 1.13e-19 90.5
MsaG037100 AT3G28910.1 42.453 106 55 3 220 321 14 117 1.82e-19 89.4
MsaG037100 AT5G14750.3 52.381 63 30 0 253 315 18 80 1.97e-19 85.9
MsaG037100 AT1G25340.2 43.750 96 50 1 218 313 18 109 2.27e-19 88.2
MsaG037100 AT3G62610.1 44.118 102 54 2 220 319 14 114 2.60e-19 89.4
MsaG037100 AT4G25560.1 42.268 97 55 1 220 315 12 108 2.83e-19 88.2
MsaG037100 AT3G12820.1 41.593 113 62 3 215 324 10 121 4.35e-19 86.7
MsaG037100 AT1G25340.3 43.750 96 50 1 218 313 18 109 5.19e-19 87.8
MsaG037100 AT2G47460.1 42.157 102 56 2 220 319 14 114 5.67e-19 88.6
MsaG037100 AT5G35550.2 52.239 67 32 0 253 319 53 119 7.04e-19 86.7
MsaG037100 AT4G37780.1 37.398 123 71 4 220 339 14 133 7.28e-19 87.4
MsaG037100 AT1G68320.1 42.708 96 52 2 220 313 21 115 7.44e-19 87.0
MsaG037100 AT5G49330.1 39.806 103 57 2 220 319 14 114 9.72e-19 87.4
MsaG037100 AT1G08810.1 42.453 106 55 3 220 321 14 117 9.86e-19 86.3
MsaG037100 AT5G62320.1 44.144 111 51 4 220 320 15 124 1.06e-18 85.5
MsaG037100 AT5G57620.1 40.171 117 65 4 220 331 14 130 1.43e-18 87.0
MsaG037100 AT5G65790.1 40.909 110 61 3 220 325 14 123 9.35e-18 85.1
MsaG037100 AT3G49690.1 40.909 110 61 3 220 325 14 123 9.42e-18 84.0
MsaG037100 AT5G23000.1 39.806 103 58 2 220 319 14 115 1.05e-17 84.3
MsaG037100 AT1G66380.1 42.708 96 54 1 220 314 10 105 1.91e-17 79.3
MsaG037100 AT1G14350.2 34.711 121 76 2 223 340 28 148 2.52e-17 84.3
MsaG037100 AT1G14350.1 34.711 121 76 2 223 340 28 148 2.52e-17 84.3
MsaG037100 AT5G52260.1 40.870 115 65 2 218 330 12 125 2.58e-17 82.0
MsaG037100 AT1G56650.1 41.237 97 56 1 220 315 10 106 4.01e-17 81.3
MsaG037100 AT3G18100.1 40.000 100 58 2 215 313 490 588 5.24e-17 84.3
MsaG037100 AT3G18100.1 38.298 94 58 0 220 313 546 639 1.51e-15 79.7
MsaG037100 AT1G79180.2 35.294 136 53 4 220 320 16 151 5.73e-17 82.0
MsaG037100 AT3G12820.2 48.611 72 37 0 253 324 2 73 6.27e-17 79.3
MsaG037100 AT1G48000.1 40.000 95 56 1 220 313 34 128 6.48e-17 80.5
MsaG037100 AT3G18100.3 40.000 100 58 2 215 313 442 540 8.36e-17 83.6
MsaG037100 AT3G18100.3 33.333 126 84 0 188 313 466 591 2.39e-15 79.0
MsaG037100 AT3G18100.4 40.000 100 58 2 215 313 329 427 8.59e-17 83.2
MsaG037100 AT3G18100.4 33.333 126 84 0 188 313 353 478 2.20e-15 79.0
MsaG037100 AT3G18100.2 40.000 100 58 2 215 313 277 375 1.08e-16 82.8
MsaG037100 AT3G18100.2 33.333 126 84 0 188 313 301 426 2.94e-15 78.6
MsaG037100 AT1G66390.1 42.708 96 54 1 220 314 10 105 1.19e-16 79.7
MsaG037100 AT3G53200.2 48.052 77 39 1 253 329 12 87 1.61e-16 78.6
MsaG037100 AT5G59780.2 48.000 75 38 1 253 327 23 96 3.46e-16 77.8
MsaG037100 AT2G02820.2 36.264 91 58 0 223 313 33 123 7.30e-16 80.1
MsaG037100 AT2G02820.1 36.264 91 58 0 223 313 33 123 8.21e-16 79.7
MsaG037100 AT3G46130.4 48.000 75 38 1 253 327 23 96 8.29e-16 77.0
MsaG037100 AT5G49620.1 41.053 95 55 1 220 313 28 122 8.42e-16 78.2
MsaG037100 AT3G46130.3 48.000 75 38 1 253 327 13 86 9.11e-16 76.6
MsaG037100 AT2G02820.3 36.264 91 58 0 223 313 33 123 1.74e-15 77.8
MsaG037100 AT3G47600.2 47.826 69 35 1 253 320 42 110 2.05e-15 77.4
MsaG037100 AT2G37630.1 35.338 133 81 2 222 349 6 138 2.39e-15 77.8
MsaG037100 AT3G06490.1 40.000 95 56 1 220 313 21 115 3.20e-15 76.6
MsaG037100 AT5G40350.2 49.180 61 31 0 253 313 8 68 4.61e-15 73.2
MsaG037100 AT3G27810.2 49.180 61 31 0 253 313 7 67 5.17e-15 73.6
MsaG037100 AT2G36890.1 38.679 106 62 3 220 322 14 119 2.74e-14 73.6
MsaG037100 AT1G22640.3 53.448 58 26 1 264 320 2 59 3.19e-14 71.6
MsaG037100 AT5G14750.4 50.000 52 26 0 264 315 2 53 3.72e-14 70.1
MsaG037100 AT5G14750.2 50.000 52 26 0 264 315 2 53 3.72e-14 70.1
MsaG037100 AT2G36890.2 38.679 106 62 3 220 322 55 160 4.75e-14 73.6
MsaG037100 AT3G23250.2 50.000 58 28 1 264 320 2 59 7.26e-13 68.2
MsaG037100 AT5G49620.2 35.780 109 55 2 220 313 28 136 1.28e-12 68.9
MsaG037100 AT1G71030.2 37.500 64 40 0 256 319 5 68 3.59e-12 65.5
MsaG037100 AT1G71030.1 37.500 64 40 0 256 319 19 82 4.02e-12 65.5
MsaG037100 AT1G09770.1 37.647 85 52 1 221 305 8 91 4.20e-12 68.9
MsaG037100 AT1G66380.3 47.619 63 33 0 253 315 11 73 8.13e-12 62.0

Find 105 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTGAGCTTTCAAAATT+TGG 0.062051 7:+51695967 None:intergenic
GTCCAATTGGTGGATCAATT+TGG 0.216324 7:-51698400 MsaT037100.1:CDS
AAACAGATGGTTCTGAAGTT+TGG 0.236677 7:+51714595 None:intergenic
TCCAATTGGTGGATCAATTT+GGG 0.272796 7:-51698399 MsaT037100.1:CDS
AGATCAATTTCTTGCTTAAG+AGG 0.316151 7:+51695790 None:intergenic
CCATCTTCGACCAAACATTA+AGG 0.321091 7:-51698302 MsaT037100.1:intron
ATCAATTTGGGCTTAGAAAA+TGG 0.323686 7:-51698387 MsaT037100.1:CDS
GGTTCTTCCTCTTGGCATTT+AGG 0.324518 7:+51696109 None:intergenic
CATTGTCCCTTGATTTGATT+GGG 0.325873 7:+51698601 None:intergenic
AACAGATGGTTCTGAAGTTT+GGG 0.326560 7:+51714596 None:intergenic
GGCGTTCCAGTGGTTCTTGA+TGG 0.329167 7:+51696143 None:intergenic
AATTATGAGTTTGGATCATA+TGG 0.334435 7:-51695835 MsaT037100.1:CDS
ACTACTGAAGCATCAGCTTC+TGG 0.337176 7:+51715047 None:intergenic
CCATTGTCCCTTGATTTGAT+TGG 0.338992 7:+51698600 None:intergenic
GGCATTTAGGCGGCGCTTAG+TGG 0.342982 7:+51696122 None:intergenic
GAACCGAGGTAAGAGTTTAA+AGG 0.359025 7:-51696091 MsaT037100.1:CDS
TCATTACCATTGAATGTCAT+TGG 0.362180 7:+51695889 None:intergenic
AACCCACAAATTTCGTTCTC+TGG 0.372683 7:+51695916 None:intergenic
AAGAATGACACCTTAATGTT+TGG 0.374739 7:+51698292 None:intergenic
TTGTAGGGTTCTTGTCCAAT+TGG 0.386156 7:-51698413 MsaT037100.1:intron
GCAGAAGAAAACTGAAGAAA+TGG 0.392660 7:+51712254 None:intergenic
TTAGCAGGAACAAAGCTAAT+AGG 0.393297 7:+51714699 None:intergenic
AACCGAGGTAAGAGTTTAAA+GGG 0.400405 7:-51696090 MsaT037100.1:CDS
TGGCTCAAAACTATCATCAT+TGG 0.400599 7:+51714827 None:intergenic
TTTGTTCCAATGACATTCAA+TGG 0.400640 7:-51695895 MsaT037100.1:CDS
AACACTAAGGTGTGGAACTA+AGG 0.403347 7:-51712306 MsaT037100.1:CDS
TAAGTAAACAAGTAGGTTCT+AGG 0.411388 7:-51714665 MsaT037100.1:CDS
GAAAACAATGCAGAGATAGA+TGG 0.411884 7:-51698330 MsaT037100.1:CDS
ACAAAATAGTTGGAAACAAA+TGG 0.411936 7:-51696206 MsaT037100.1:CDS
ACTACTTCTAAAATACATAA+TGG 0.416714 7:-51696064 MsaT037100.1:CDS
ACCATGATGAATTATGAGTT+TGG 0.416825 7:-51695844 MsaT037100.1:CDS
CTTACCTCGGTTCTTCCTCT+TGG 0.419409 7:+51696101 None:intergenic
AAGTTTCTGAAAGGCAGAAT+TGG 0.420799 7:-51698352 MsaT037100.1:CDS
GGTAGATGATGATGGGGATA+AGG 0.422795 7:+51714866 None:intergenic
GGCTCAAAACTATCATCATT+GGG 0.422832 7:+51714828 None:intergenic
AGTTTGACACCGAGGTTGAA+TGG 0.426320 7:+51714952 None:intergenic
CTTATAACCTCTGCATTAGC+AGG 0.433082 7:+51714684 None:intergenic
ATCGAAGCTCACAAAATAGT+TGG 0.441695 7:-51696216 MsaT037100.1:CDS
TAGGGTTCTTGTCCAATTGG+TGG 0.446482 7:-51698410 MsaT037100.1:CDS
ATGACATTCAATGGTAATGA+TGG 0.449667 7:-51695886 MsaT037100.1:CDS
CCTTAATGTTTGGTCGAAGA+TGG 0.450935 7:+51698302 None:intergenic
GCCCAAATTGATCCACCAAT+TGG 0.455221 7:+51698398 None:intergenic
TTCCAGAGAACGAAATTTGT+GGG 0.460640 7:-51695918 MsaT037100.1:CDS
TTGTGCTTGGTAGATGATGA+TGG 0.462226 7:+51714858 None:intergenic
GGTTGAAGAGGATGGTCAAC+AGG 0.465262 7:+51714735 None:intergenic
GAAATTTCAAGAAGATTGCC+AGG 0.467461 7:-51696180 MsaT037100.1:CDS
GATGGAATGGCAAGTGGATC+TGG 0.471586 7:-51695868 MsaT037100.1:CDS
TAAGCAAGAAATTGATCTCA+TGG 0.473623 7:-51695785 MsaT037100.1:CDS
CAATGCTAAGGAAGTTGAAA+AGG 0.475917 7:-51696034 MsaT037100.1:CDS
TCTTGCTTAAGAGGAACCTC+AGG 0.484485 7:+51695799 None:intergenic
GTTTGACACCGAGGTTGAAT+GGG 0.486465 7:+51714953 None:intergenic
TTTGATTTCAGAAGGATTCG+TGG 0.492165 7:-51696263 MsaT037100.1:intron
TCAAGAAAGAATACATGTAA+TGG 0.495694 7:-51714790 MsaT037100.1:CDS
ATCCATGTCTGAAGAGGTTG+AGG 0.498445 7:+51714929 None:intergenic
CTTTCAGAAACTTAGCAATA+CGG 0.498946 7:+51698362 None:intergenic
CAAGGATCCCAATCAAATCA+AGG 0.510784 7:-51698608 MsaT037100.1:CDS
TGTGCTTGGTAGATGATGAT+GGG 0.519662 7:+51714859 None:intergenic
TGTATTCTTTCTTGAACACT+AGG 0.519880 7:+51714798 None:intergenic
CTAATAGGTTCAATCATTGA+AGG 0.524049 7:+51714714 None:intergenic
CGAGGTTGAATGGGAGACTA+AGG 0.524683 7:+51714962 None:intergenic
TCCCCTTTAAACTCTTACCT+CGG 0.524843 7:+51696088 None:intergenic
TCTTGAACACTAGGATACAT+TGG 0.525251 7:+51714807 None:intergenic
ATTCCAGAGAACGAAATTTG+TGG 0.531565 7:-51695919 MsaT037100.1:CDS
CTCCTCAACCTCTTCAGACA+TGG 0.533787 7:-51714931 MsaT037100.1:CDS
ATGGAGTTCTCAGTGCGCCC+TGG 0.535313 7:+51696162 None:intergenic
GAAGTTTGGGTGATTGAAGT+GGG 0.538287 7:+51714609 None:intergenic
TTTCAGAAACTTAGCAATAC+GGG 0.540409 7:+51698363 None:intergenic
AGAACTCCATCAAGAACCAC+TGG 0.541811 7:-51696149 MsaT037100.1:CDS
GATGCTTCAGTAGTTAATCA+AGG 0.549570 7:-51715038 MsaT037100.1:CDS
AATGGAAGTCATCAATGCTA+AGG 0.554756 7:-51696046 MsaT037100.1:CDS
TGAGTTTGGATCATATGGAA+TGG 0.555173 7:-51695830 MsaT037100.1:CDS
CTTTGTTCCTGCTAATGCAG+AGG 0.563703 7:-51714691 MsaT037100.1:CDS
ATTCAATGGTAATGATGGAA+TGG 0.566386 7:-51695881 MsaT037100.1:CDS
CGTATTGCTAAGTTTCTGAA+AGG 0.570187 7:-51698361 MsaT037100.1:CDS
TCAATCATTGAAGGTTGAAG+AGG 0.571569 7:+51714723 None:intergenic
GGCGCTTAGTGGCGTTCCAG+TGG 0.578401 7:+51696133 None:intergenic
TCCAAACTCATAATTCATCA+TGG 0.580265 7:+51695843 None:intergenic
TGAAGTTTGGGTGATTGAAG+TGG 0.580845 7:+51714608 None:intergenic
CCAATCAAATCAAGGGACAA+TGG 0.585514 7:-51698600 MsaT037100.1:CDS
ACACTAAGGTGTGGAACTAA+GGG 0.587991 7:-51712305 MsaT037100.1:CDS
AATTTGGTCAGTCACTACTC+AGG 0.605578 7:-51714567 MsaT037100.1:intron
GACGTATTCTATGAGCATGA+TGG 0.609671 7:-51696004 MsaT037100.1:CDS
GAGGTTATAAGTAAACAAGT+AGG 0.609847 7:-51714672 MsaT037100.1:CDS
AACATCATCCATGTCTGAAG+AGG 0.610339 7:+51714923 None:intergenic
GGGACAATGGACTTCAAATG+AGG 0.612328 7:-51698587 MsaT037100.1:CDS
TAAGGTGTGGAACTAAGGGT+TGG 0.613698 7:-51712301 MsaT037100.1:CDS
GGATTCGTGGACCGAAGAGG+AGG 0.618178 7:-51696250 MsaT037100.1:CDS
ACAAACAAAAGATAACACTA+AGG 0.618448 7:-51712319 MsaT037100.1:CDS
AAGGATCCCAATCAAATCAA+GGG 0.629321 7:-51698607 MsaT037100.1:CDS
GAAGGATTCGTGGACCGAAG+AGG 0.631996 7:-51696253 MsaT037100.1:CDS
GGTAATGATGGAATGGCAAG+TGG 0.632233 7:-51695874 MsaT037100.1:CDS
TAATAATGAAATTCAACACA+AGG 0.640392 7:-51698626 MsaT037100.1:CDS
ATGCTCATAGAATACGTCAT+CGG 0.644204 7:+51696009 None:intergenic
AATGGACTTCAAATGAGGAT+CGG 0.644601 7:-51698582 MsaT037100.1:intron
TCATTGAAGGTTGAAGAGGA+TGG 0.646318 7:+51714727 None:intergenic
CAAAAGATAACACTAAGGTG+TGG 0.646886 7:-51712314 MsaT037100.1:CDS
AAATTTCAAGAAGATTGCCA+GGG 0.649002 7:-51696179 MsaT037100.1:CDS
CTTAGTCTCCCATTCAACCT+CGG 0.651111 7:-51714961 MsaT037100.1:CDS
ACTATATTAGAGATGTGATG+AGG 0.654378 7:+51715005 None:intergenic
TCTTCCTCTTGGCATTTAGG+CGG 0.677072 7:+51696112 None:intergenic
GTGCTTGGTAGATGATGATG+GGG 0.689956 7:+51714860 None:intergenic
ACCGAGGTAAGAGTTTAAAG+GGG 0.692526 7:-51696089 MsaT037100.1:CDS
GGTTGAGGAGTTTGACACCG+AGG 0.699369 7:+51714944 None:intergenic
AGCGCCGCCTAAATGCCAAG+AGG 0.709993 7:-51696116 MsaT037100.1:CDS
AATGCCAAGAGGAAGAACCG+AGG 0.780461 7:-51696105 MsaT037100.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 51695762 51715087 51695762 ID=MsaG037100
Chr7 mRNA 51695762 51715087 51695762 ID=MsaT037100.1;Parent=MsaG037100
Chr7 exon 51695762 51696274 51695762 ID=MsaT037100.1.exon5;Parent=MsaT037100.1
Chr7 CDS 51695762 51696274 51695762 ID=cds.MsaT037100.1;Parent=MsaT037100.1
Chr7 exon 51698303 51698429 51698303 ID=MsaT037100.1.exon4;Parent=MsaT037100.1
Chr7 CDS 51698303 51698429 51698303 ID=cds.MsaT037100.1;Parent=MsaT037100.1
Chr7 exon 51698583 51698657 51698583 ID=MsaT037100.1.exon3;Parent=MsaT037100.1
Chr7 CDS 51698583 51698657 51698583 ID=cds.MsaT037100.1;Parent=MsaT037100.1
Chr7 exon 51712266 51712356 51712266 ID=MsaT037100.1.exon2;Parent=MsaT037100.1
Chr7 CDS 51712266 51712356 51712266 ID=cds.MsaT037100.1;Parent=MsaT037100.1
Chr7 exon 51714568 51715087 51714568 ID=MsaT037100.1.exon1;Parent=MsaT037100.1
Chr7 CDS 51714568 51715087 51714568 ID=cds.MsaT037100.1;Parent=MsaT037100.1
Gene Sequence

>MsaT037100.1

GAGGAGAGAGCTGCTTGTCCAGAAGCTGATGCTTCAGTAGTTAATCAAGGTAATACTGATCCTCATCACATCTCTAATATAGTAGAAATCGATTCTAGTACAACCTTAGTCTCCCATTCAACCTCGGTGTCAAACTCCTCAACCTCTTCAGACATGGATGATGTTCCCTTGAACAAAATTTATGCAAATCTACATAAATCCTTATCCCCATCATCATCTACCAAGCACAAGAAAAAGCCCAATGATGATAGTTTTGAGCCAATGTATCCTAGTGTTCAAGAAAGAATACATGTAATGGCTCAAATCAGATTCAATGTTTGTGCAAGACTACCTGTTGACCATCCTCTTCAACCTTCAATGATTGAACCTATTAGCTTTGTTCCTGCTAATGCAGAGGTTATAAGTAAACAAGTAGGTTCTAGGTCTGCAAACTTTAATGAGTCGTCATCATCTCATCCCACTTCAATCACCCAAACTTCAGAACCATCTGTTTTTGAGAATTTGGTCAGTCACTACTCAGAATTTAAAACAAACAACAAACAAAAGATAACACTAAGGTGTGGAACTAAGGGTTGGTTTGTTGTTGTTTCTTCATCTTCTCCATTTCTTCAGATTCAAAATAATAATGAAATTCAACACAAGGATCCCAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGGTTCTTGTCCAATTGGTGGATCAATTTGGGCTTAGAAAATGGTCCCGTATTGCTAAGTTTCTGAAAGGCAGAATTGGAAAACAATGCAGAGATAGATGGAATAACCATCTTCGACCAAACATTAAGAAGGATTCGTGGACCGAAGAGGAGGAAAAAAGATTAATCGAAGCTCACAAAATAGTTGGAAACAAATGGACTGAAATTTCAAGAAGATTGCCAGGGCGCACTGAGAACTCCATCAAGAACCACTGGAACGCCACTAAGCGCCGCCTAAATGCCAAGAGGAAGAACCGAGGTAAGAGTTTAAAGGGGATACTACTTCTAAAATACATAATGGAAGTCATCAATGCTAAGGAAGTTGAAAAGGAGCCGATGACGTATTCTATGAGCATGATGGACATTAGAAATCAACCAAATTTTGAAAGCTCAGAGAATGATTTTAGAACTGAAGGTTTGGCTATTCCAGAGAACGAAATTTGTGGGTTTGTTCCAATGACATTCAATGGTAATGATGGAATGGCAAGTGGATCTGGTACCATGATGAATTATGAGTTTGGATCATATGGAATGGAGTTTTTTCCTGAGGTTCCTCTTAAGCAAGAAATTGATCTCATGGAGATGATCTATAAAAACCCTTAA
Protein sequence

>MsaT037100.1

EERAACPEADASVVNQGNTDPHHISNIVEIDSSTTLVSHSTSVSNSSTSSDMDDVPLNKIYANLHKSLSPSSSTKHKKKPNDDSFEPMYPSVQERIHVMAQIRFNVCARLPVDHPLQPSMIEPISFVPANAEVISKQVGSRSANFNESSSSHPTSITQTSEPSVFENLVSHYSEFKTNNKQKITLRCGTKGWFVVVSSSSPFLQIQNNNEIQHKDPNQIKGQWTSNEDRVLVQLVDQFGLRKWSRIAKFLKGRIGKQCRDRWNNHLRPNIKKDSWTEEEEKRLIEAHKIVGNKWTEISRRLPGRTENSIKNHWNATKRRLNAKRKNRGKSLKGILLLKYIMEVINAKEVEKEPMTYSMSMMDIRNQPNFESSENDFRTEGLAIPENEICGFVPMTFNGNDGMASGSGTMMNYEFGSYGMEFFPEVPLKQEIDLMEMIYKNP*