AlfalfaGEDB | MsaG037297

M. sativa ssp. caerulea / MsaG037297

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043076 GO:0043078 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG037297	XP_013468829.1	91.195	159	14	0	1	159	1	159	1.47e-93	278

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG037297	sp\|Q9FJK3\|AGL80_ARATH	45.513	156	84	1	1	155	1	156	7.36e-33	121

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG037297	tr\|A0A072VMQ1\|A0A072VMQ1_MEDTR	91.195	159	14	0	1	159	1	159	7.00e-94	278

TFs/TRs:

Gene ID	Type	Classification
MsaG037297	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000083	MsaG037297	0.811123	1.404623e-50	2.465308e-48
MsaG001835	MsaG037297	0.808173	6.004250e-50	9.811919e-48
MsaG002024	MsaG037297	0.802162	1.073473e-48	1.524188e-46
MsaG002146	MsaG037297	0.812346	7.631407e-51	1.380350e-48
MsaG002291	MsaG037297	0.821519	6.799695e-53	1.556809e-50
MsaG002564	MsaG037297	0.802150	1.079432e-48	1.532237e-46
MsaG002668	MsaG037297	0.801690	1.340563e-48	1.883100e-46
MsaG002681	MsaG037297	0.810755	1.685551e-50	2.931939e-48
MsaG002727	MsaG037297	0.800513	2.326626e-48	3.182397e-46
MsaG003000	MsaG037297	0.828515	1.541969e-54	4.278265e-52
MsaG003140	MsaG037297	0.812917	5.732794e-51	1.051760e-48
MsaG003311	MsaG037297	0.801340	1.580241e-48	2.202241e-46
MsaG003332	MsaG037297	0.844039	1.808094e-58	8.027170e-56
MsaG003339	MsaG037297	0.824302	1.538324e-53	3.796708e-51
MsaG003859	MsaG037297	0.810023	2.420897e-50	4.136491e-48
MsaG003882	MsaG037297	0.804074	4.336677e-49	6.435304e-47
MsaG003915	MsaG037297	0.800226	2.660438e-48	3.615428e-46
MsaG004154	MsaG037297	0.822820	3.404983e-53	8.072827e-51
MsaG004426	MsaG037297	0.802939	7.434207e-49	1.074550e-46
MsaG004430	MsaG037297	0.800040	2.901701e-48	3.926832e-46
MsaG004696	MsaG037297	0.804916	2.900266e-49	4.388426e-47
MsaG005246	MsaG037297	0.812980	5.554961e-51	1.020727e-48
MsaG006013	MsaG037297	0.808115	6.176899e-50	1.007991e-47
MsaG006669	MsaG037297	0.808888	4.232089e-50	7.036088e-48
MsaG006679	MsaG037297	0.810850	1.608402e-50	2.804199e-48
MsaG006841	MsaG037297	0.807422	8.656051e-50	1.389241e-47
MsaG006871	MsaG037297	0.821259	7.799133e-53	1.773467e-50
MsaG006962	MsaG037297	0.820543	1.138086e-52	2.539300e-50
MsaG007575	MsaG037297	0.812294	7.833118e-51	1.414945e-48
MsaG007700	MsaG037297	0.843590	2.382095e-58	1.042382e-55
MsaG007847	MsaG037297	0.811983	9.152220e-51	1.640613e-48
MsaG007998	MsaG037297	0.803659	5.284113e-49	7.765772e-47
MsaG008033	MsaG037297	0.800028	2.917855e-48	3.947662e-46
MsaG008288	MsaG037297	0.807445	8.557229e-50	1.374161e-47
MsaG008299	MsaG037297	0.805714	1.976641e-49	3.046972e-47
MsaG009532	MsaG037297	0.811386	1.231948e-50	2.176302e-48
MsaG009848	MsaG037297	0.804262	3.965234e-49	5.909612e-47
MsaG010331	MsaG037297	0.824033	1.777721e-53	4.355634e-51
MsaG011336	MsaG037297	0.802721	8.244008e-49	1.185607e-46
MsaG011881	MsaG037297	0.800545	2.292539e-48	3.138057e-46
MsaG012130	MsaG037297	0.811154	1.382862e-50	2.429010e-48
MsaG012291	MsaG037297	0.800100	2.821298e-48	3.823163e-46
MsaG013327	MsaG037297	0.831183	3.476220e-55	1.040730e-52
MsaG013578	MsaG037297	0.824447	1.422287e-53	3.524235e-51
MsaG013961	MsaG037297	0.800072	2.858156e-48	3.870745e-46
MsaG015317	MsaG037297	0.801479	1.480010e-48	2.069063e-46
MsaG015447	MsaG037297	0.803191	6.597985e-49	9.592671e-47
MsaG015930	MsaG037297	0.806882	1.124621e-49	1.782004e-47
MsaG016429	MsaG037297	0.809414	3.268397e-50	5.503132e-48
MsaG016796	MsaG037297	0.802691	8.363065e-49	1.201927e-46
MsaG017281	MsaG037297	0.802726	8.222933e-49	1.182734e-46
MsaG017348	MsaG037297	0.820943	9.217318e-53	2.078493e-50
MsaG017682	MsaG037297	0.804739	3.156909e-49	4.757087e-47
MsaG017895	MsaG037297	0.817037	7.055099e-52	1.436531e-49
MsaG017969	MsaG037297	0.805706	1.984611e-49	3.058659e-47
MsaG018355	MsaG037297	0.817258	6.297575e-52	1.289611e-49
MsaG019540	MsaG037297	0.818300	3.673528e-52	7.726940e-50
MsaG020004	MsaG037297	0.801706	1.330261e-48	1.869311e-46
MsaG020091	MsaG037297	0.819734	1.740167e-52	3.800051e-50
MsaG020345	MsaG037297	0.806151	1.601325e-49	2.493983e-47
MsaG020641	MsaG037297	0.820472	1.181317e-52	2.630820e-50
MsaG020642	MsaG037297	0.803667	5.264006e-49	7.737663e-47
MsaG020648	MsaG037297	0.807875	6.944190e-50	1.126707e-47
MsaG021781	MsaG037297	0.821023	8.838026e-53	1.997220e-50
MsaG021783	MsaG037297	0.814134	3.104246e-51	5.871410e-49
MsaG021836	MsaG037297	0.807583	8.002588e-50	1.289306e-47
MsaG022048	MsaG037297	0.804836	3.012644e-49	4.550112e-47
MsaG022074	MsaG037297	0.809289	3.475566e-50	5.833999e-48
MsaG022609	MsaG037297	0.833678	8.434420e-56	2.716233e-53
MsaG022759	MsaG037297	0.856328	6.728022e-62	4.561740e-59
MsaG022939	MsaG037297	0.808556	4.977690e-50	8.209643e-48
MsaG022981	MsaG037297	0.820337	1.267861e-52	2.813652e-50
MsaG023664	MsaG037297	0.810499	1.913808e-50	3.308250e-48
MsaG023728	MsaG037297	0.806436	1.395865e-49	2.188774e-47
MsaG023812	MsaG037297	0.803801	4.937968e-49	7.281008e-47
MsaG023849	MsaG037297	0.826895	3.760763e-54	9.970807e-52
MsaG024116	MsaG037297	0.827166	3.242153e-54	8.661027e-52
MsaG024313	MsaG037297	0.817386	5.894761e-52	1.211078e-49
MsaG024535	MsaG037297	0.806894	1.118542e-49	1.772836e-47
MsaG025976	MsaG037297	0.803434	5.881338e-49	8.598456e-47
MsaG026252	MsaG037297	0.817147	6.666947e-52	1.361347e-49
MsaG026601	MsaG037297	0.802452	9.362347e-49	1.338228e-46
MsaG028970	MsaG037297	0.811349	1.254841e-50	2.214730e-48
MsaG029210	MsaG037297	0.825909	6.443398e-54	1.662170e-51
MsaG029894	MsaG037297	0.829553	8.664431e-55	2.475704e-52
MsaG030578	MsaG037297	0.808746	4.535449e-50	7.514978e-48
MsaG031132	MsaG037297	0.811074	1.439276e-50	2.523147e-48
MsaG031693	MsaG037297	0.808138	6.106749e-50	9.970929e-48
MsaG031694	MsaG037297	0.811464	1.185443e-50	2.098119e-48
MsaG032196	MsaG037297	0.823877	1.933912e-53	4.718046e-51
MsaG032728	MsaG037297	0.804314	3.867748e-49	5.771207e-47
MsaG033732	MsaG037297	0.827449	2.775902e-54	7.474441e-52
MsaG034005	MsaG037297	0.816138	1.119537e-51	2.227548e-49
MsaG035181	MsaG037297	0.854277	2.641219e-61	1.663056e-58
MsaG035333	MsaG037297	0.800705	2.127270e-48	2.922453e-46
MsaG035496	MsaG037297	0.818606	3.134117e-52	6.644996e-50
MsaG036503	MsaG037297	0.813264	4.813924e-51	8.908748e-49
MsaG037276	MsaG037297	0.843607	2.357972e-58	1.032395e-55
MsaG037297	MsaG037333	0.810620	1.801995e-50	3.124222e-48
MsaG037297	MsaG038168	0.817635	5.182393e-52	1.071524e-49
MsaG037297	MsaG038170	0.802166	1.071274e-48	1.521219e-46
MsaG037297	MsaG038059	0.834870	4.251298e-56	1.418499e-53
MsaG037297	MsaG038674	0.806610	1.282908e-49	2.019947e-47
MsaG037297	MsaG038967	0.823548	2.306421e-53	5.576983e-51
MsaG037297	MsaG039098	0.826996	3.560014e-54	9.464926e-52
MsaG037297	MsaG039649	0.806215	1.552618e-49	2.421897e-47
MsaG037297	MsaG039773	0.809179	3.668353e-50	6.141529e-48
MsaG037297	MsaG039824	0.813599	4.067289e-51	7.590531e-49
MsaG037297	MsaG040037	0.801953	1.184467e-48	1.673817e-46
MsaG037297	MsaG040162	0.801750	1.303410e-48	1.833412e-46
MsaG037297	MsaG040265	0.805074	2.688693e-49	4.083209e-47
MsaG037297	MsaG040336	0.903769	5.768634e-79	3.691037e-75
MsaG037297	MsaG040573	0.817961	4.378289e-52	9.129515e-50
MsaG037297	MsaG041010	0.819453	2.015442e-52	4.369201e-50
MsaG037297	MsaG041066	0.816511	9.245645e-52	1.857157e-49
MsaG037297	MsaG041303	0.803688	5.212213e-49	7.665216e-47
MsaG037297	MsaG041370	0.804945	2.859512e-49	4.329696e-47
MsaG037297	MsaG042799	0.823664	2.167761e-53	5.258432e-51
MsaG037297	MsaG043354	0.813242	4.869606e-51	9.006707e-49
MsaG037297	MsaG043880	0.802633	8.592792e-49	1.233355e-46
MsaG037297	MsaG043975	0.822497	4.044927e-53	9.506508e-51
MsaG037297	MsaG044785	0.800352	2.508489e-48	3.418728e-46
MsaG037297	MsaG044886	0.813380	4.541961e-51	8.429880e-49
MsaG037297	MsaG045051	0.806078	1.659174e-49	2.579574e-47
MsaG037297	MsaG045295	0.812021	8.978863e-51	1.611036e-48
MsaG037297	MsaG045314	0.826503	4.661622e-54	1.222532e-51
MsaG037297	MsaG046057	0.801494	1.469711e-48	2.055337e-46
MsaG037297	MsaG046281	0.829775	7.654579e-55	2.201055e-52
MsaG037297	MsaG046289	0.837887	7.321782e-57	2.675879e-54
MsaG037297	MsaG046321	0.803914	4.680244e-49	6.918987e-47
MsaG037297	MsaG046598	0.815724	1.383697e-51	2.724288e-49
MsaG037297	MsaG000632	0.825874	6.567050e-54	1.692428e-51
MsaG037297	MsaG004516	0.801212	1.678079e-48	2.331716e-46
MsaG037297	MsaG003231	0.838867	4.103276e-57	1.546096e-54
MsaG037297	MsaG000658	0.820505	1.161160e-52	2.588131e-50
MsaG037297	MsaG007532	0.806574	1.305968e-49	2.054445e-47
MsaG037297	MsaG013105	0.819367	2.107348e-52	4.558264e-50
MsaG037297	MsaG011916	0.810856	1.603707e-50	2.796390e-48
MsaG037297	MsaG018328	0.808520	5.068011e-50	8.351327e-48
MsaG037297	MsaG019768	0.803758	5.040372e-49	7.424605e-47
MsaG037297	MsaG021117	0.809783	2.725766e-50	4.630545e-48
MsaG037297	MsaG022343	0.806604	1.286683e-49	2.025591e-47
MsaG037297	MsaG020224	0.816614	8.772099e-52	1.766670e-49
MsaG037297	MsaG018951	0.813644	3.976675e-51	7.429656e-49
MsaG037297	MsaG020214	0.834167	6.371107e-56	2.081492e-53
MsaG037297	MsaG024064	0.812147	8.430184e-51	1.517254e-48
MsaG037297	MsaG027635	0.866454	5.656010e-65	5.664327e-62
MsaG037297	MsaG034563	0.808623	4.818693e-50	7.960072e-48
MsaG037297	MsaG033379	0.811528	1.148027e-50	2.035090e-48
MsaG037297	MsaG030783	0.832975	1.259983e-55	3.974478e-53
MsaG037297	MsaG032996	0.853729	3.795078e-61	2.343016e-58
MsaG037297	MsaG030780	0.807064	1.030069e-49	1.639174e-47
MsaG037297	MsaG037462	0.815598	1.475645e-51	2.896068e-49
MsaG037297	MsaG042294	0.812157	8.390422e-51	1.510449e-48
MsaG037297	MsaG044301	0.818921	2.660135e-52	5.686730e-50
MsaG037297	MsaG047199	0.801065	1.797759e-48	2.489719e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG037297	MtrunA17_Chr1g0188661	91.195	159	14	0	1	159	1	159	1.35e-97	278
MsaG037297	MtrunA17_Chr7g0218151	88.050	159	19	0	1	159	1	159	3.01e-94	270
MsaG037297	MtrunA17_Chr4g0012761	86.164	159	22	0	1	159	1	159	4.09e-94	269
MsaG037297	MtrunA17_Chr1g0188681	71.338	157	45	0	1	157	1	157	1.07e-78	230
MsaG037297	MtrunA17_Chr1g0188651	74.214	159	39	1	1	159	1	157	4.82e-75	221
MsaG037297	MtrunA17_Chr5g0420351	67.949	156	50	0	1	156	1	156	4.75e-73	216
MsaG037297	MtrunA17_Chr1g0193311	72.436	156	43	0	1	156	1	156	6.31e-73	216
MsaG037297	MtrunA17_Chr1g0197261	56.774	155	67	0	1	155	1	155	4.68e-58	178
MsaG037297	MtrunA17_Chr1g0197321	55.128	156	69	1	1	155	1	156	5.15e-56	173
MsaG037297	MtrunA17_Chr1g0197461	54.248	153	70	0	3	155	2	154	1.09e-54	169
MsaG037297	MtrunA17_Chr3g0110131	49.045	157	79	1	1	156	1	157	1.07e-38	131
MsaG037297	MtrunA17_Chr5g0432691	39.103	156	94	1	1	155	1	156	3.42e-37	125
MsaG037297	MtrunA17_Chr3g0107381	42.484	153	87	1	1	152	1	153	5.51e-36	124
MsaG037297	MtrunA17_Chr4g0014321	36.774	155	96	2	1	153	1	155	3.09e-34	119
MsaG037297	MtrunA17_Chr3g0107331	41.401	157	91	1	3	158	2	158	2.81e-32	112
MsaG037297	MtrunA17_Chr4g0014031	42.667	150	84	2	1	148	1	150	6.51e-32	114
MsaG037297	MtrunA17_Chr3g0107361	40.909	154	90	1	3	155	2	155	8.45e-31	108
MsaG037297	MtrunA17_Chr3g0107351	41.935	155	87	2	3	155	2	155	3.45e-30	107
MsaG037297	MtrunA17_Chr4g0014121	42.500	160	90	2	1	158	29	188	5.45e-30	107
MsaG037297	MtrunA17_Chr4g0013041	35.484	155	96	3	1	153	1	153	8.78e-30	107
MsaG037297	MtrunA17_Chr3g0107341	39.610	154	92	1	3	155	2	155	2.27e-29	105
MsaG037297	MtrunA17_Chr2g0283941	38.994	159	95	2	1	157	1	159	9.49e-29	105
MsaG037297	MtrunA17_Chr8g0351751	36.478	159	97	2	1	155	1	159	5.29e-28	104
MsaG037297	MtrunA17_Chr4g0014131	39.752	161	95	2	1	159	1	161	6.39e-27	100
MsaG037297	MtrunA17_Chr3g0107461	32.704	159	105	2	1	157	1	159	8.16e-26	96.3
MsaG037297	MtrunA17_Chr2g0296831	41.026	117	68	1	1	116	1	117	1.57e-24	92.0
MsaG037297	MtrunA17_Chr2g0296861	32.258	155	104	1	1	154	1	155	2.48e-21	84.7
MsaG037297	MtrunA17_Chr3g0105791	34.884	129	82	2	31	157	3	131	5.97e-21	83.2
MsaG037297	MtrunA17_Chr4g0031421	34.884	129	82	2	31	157	3	131	1.41e-20	82.4
MsaG037297	MtrunA17_Chr3g0106501	35.156	128	81	2	32	157	4	131	1.81e-19	79.7
MsaG037297	MtrunA17_Chr4g0008701	33.553	152	94	3	1	148	1	149	1.97e-18	81.3
MsaG037297	MtrunA17_Chr7g0267601	37.168	113	67	2	1	109	1	113	3.67e-17	77.4
MsaG037297	MtrunA17_Chr3g0106421	33.594	128	81	3	31	155	3	129	2.07e-16	73.2
MsaG037297	MtrunA17_Chr3g0128721	27.632	152	105	2	3	151	6	155	4.57e-13	65.9
MsaG037297	MtrunA17_Chr1g0161931	40.426	94	55	1	64	156	28	121	1.03e-11	58.5
MsaG037297	MtrunA17_Chr1g0162261	37.500	96	59	1	64	158	22	117	1.12e-11	58.5
MsaG037297	MtrunA17_Chr6g0449861	29.464	112	73	3	1	106	9	120	3.91e-11	60.1
MsaG037297	MtrunA17_Chr1g0162181	38.542	96	58	1	64	158	22	117	5.01e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG037297	AT5G48670.1	45.513	156	84	1	1	155	1	156	7.48e-34	121
MsaG037297	AT3G05860.2	38.926	149	90	1	1	148	1	149	3.79e-30	108
MsaG037297	AT5G26630.1	38.750	160	97	1	1	159	1	160	1.17e-29	108
MsaG037297	AT3G05860.3	38.926	149	90	1	1	148	1	149	2.05e-29	108
MsaG037297	AT3G05860.1	38.926	149	90	1	1	148	1	149	2.65e-29	108
MsaG037297	AT1G65300.1	36.054	147	93	1	3	148	2	148	6.26e-27	102
MsaG037297	AT1G65330.1	36.735	147	92	1	3	148	2	148	2.10e-26	101
MsaG037297	AT5G26650.1	35.294	153	98	1	4	155	2	154	6.76e-24	95.9
MsaG037297	AT5G27960.1	43.925	107	59	1	4	109	2	108	2.73e-23	93.6
MsaG037297	AT1G22590.2	29.012	162	99	3	1	155	1	153	1.93e-20	82.8
MsaG037297	AT5G27810.1	45.238	84	45	1	31	113	3	86	1.59e-19	79.3
MsaG037297	AT1G31630.1	29.032	155	108	2	3	156	2	155	3.05e-19	82.8
MsaG037297	AT2G28700.1	33.813	139	89	2	1	138	1	137	5.76e-18	79.3
MsaG037297	AT1G31640.1	38.739	111	66	2	3	112	2	111	1.28e-17	79.0
MsaG037297	AT5G26580.1	36.697	109	56	1	1	109	1	96	1.48e-15	72.8
MsaG037297	AT2G40210.1	37.864	103	59	2	1	100	1	101	1.59e-12	64.3
MsaG037297	AT5G58890.1	33.333	111	66	3	1	104	1	110	3.21e-12	63.2
MsaG037297	AT5G06500.1	35.849	106	64	2	1	102	1	106	1.36e-11	60.8

Find 26 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTGCAAAAGGAAACTTTCT+TGG	0.253590	7:+55453599	None:intergenic
AACAGAGGTGTGGCCAAATC+TGG	0.333286	7:-55453689	MsaT037297.1:CDS
TGTTGAATCATTGGAGATAA+AGG	0.341938	7:+55453825	None:intergenic
CTTGTCTTTGCTTTCTCAGT+TGG	0.347479	7:+55453557	None:intergenic
AGCCTTTCTTGTTGAATCAT+TGG	0.353862	7:+55453816	None:intergenic
CTCCAATGATTCAACAAGAA+AGG	0.407412	7:-55453818	MsaT037297.1:CDS
AAATCTGGAGGAAGCAAAAC+AGG	0.418438	7:-55453674	MsaT037297.1:CDS
CTTTAGTAATCTGTTGCAAA+AGG	0.444882	7:+55453587	None:intergenic
TCTTTCTGATTTGAAAGACT+TGG	0.461416	7:-55453461	MsaT037297.1:CDS
TTTCACCTTCTTTCTAGTCA+TGG	0.476937	7:+55453852	None:intergenic
TCAGAAAGAGTGATATCATC+TGG	0.482942	7:+55453475	None:intergenic
GAAGAAAAGTATCATAATGA+AGG	0.494513	7:-55453779	MsaT037297.1:CDS
CAGAACTCATATATGAAAGA+TGG	0.506115	7:-55453637	MsaT037297.1:CDS
AGCTGAACATTCGTATGAGC+TGG	0.525005	7:-55453519	MsaT037297.1:CDS
AGAGAACTCACTATTCTTTG+TGG	0.526508	7:-55453754	MsaT037297.1:CDS
TGCAACAGATTACTAAAGCT+AGG	0.531119	7:-55453582	MsaT037297.1:CDS
GCAACAGATTACTAAAGCTA+GGG	0.532673	7:-55453581	MsaT037297.1:CDS
GAAGGAAATTGATGACAAGA+TGG	0.550366	7:-55453416	MsaT037297.1:CDS
AGGATCGGAAATTATAGCAC+AGG	0.559456	7:+55453723	None:intergenic
CGAAGCCATGACTAGAAAGA+AGG	0.562075	7:-55453857	None:intergenic
GAAAGGCTTCCTACAAGAAG+AGG	0.563850	7:-55453801	MsaT037297.1:CDS
TCGGAAATTATAGCACAGGC+TGG	0.570119	7:+55453727	None:intergenic
TTGATTCTAAAACAGAGGTG+TGG	0.633348	7:-55453699	MsaT037297.1:CDS
AAGCAAAACAGGTGATTGAG+AGG	0.635256	7:-55453663	MsaT037297.1:CDS
AGAGGTGTGGCCAAATCTGG+AGG	0.647190	7:-55453686	MsaT037297.1:CDS
CTGGTACCTGCAAAACAACA+CGG	0.672567	7:-55453500	MsaT037297.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	55453393	55453872	55453393	ID=MsaG037297
Chr7	mRNA	55453393	55453872	55453393	ID=MsaT037297.1;Parent=MsaG037297
Chr7	exon	55453393	55453872	55453393	ID=MsaT037297.1.exon1;Parent=MsaT037297.1
Chr7	CDS	55453393	55453872	55453393	ID=cds.MsaT037297.1;Parent=MsaT037297.1

Gene Sequence

>MsaT037297.1

ATGACTAGAAAGAAGGTGAAACTCGCCTTTATCTCCAATGATTCAACAAGAAAGGCTTCCTACAAGAAGAGGAAGAAAAGTATCATAATGAAGGTGAGAGAACTCACTATTCTTTGTGGTATTCCAGCCTGTGCTATAATTTCCGATCCTTTTGATTCTAAAACAGAGGTGTGGCCAAATCTGGAGGAAGCAAAACAGGTGATTGAGAGGTATCAGAACTCATATATGAAAGATGGCAGAAAAAATGTGGACCAAGAAAGTTTCCTTTTGCAACAGATTACTAAAGCTAGGGACCAACTGAGAAAGCAAAGACAAGACAATCATGAAAATGAGCTGAACATTCGTATGAGCTGGTACCTGCAAAACAACACGGTGCCAGATGATATCACTCTTTCTGATTTGAAAGACTTGGATAAGTTAATTGCAAAAAGTATGAAGGAAATTGATGACAAGATGGCTTCACTTAGTTTATCAAACTGA

Protein sequence

>MsaT037297.1

MTRKKVKLAFISNDSTRKASYKKRKKSIIMKVRELTILCGIPACAIISDPFDSKTEVWPNLEEAKQVIERYQNSYMKDGRKNVDQESFLLQQITKARDQLRKQRQDNHENELNIRMSWYLQNNTVPDDITLSDLKDLDKLIAKSMKEIDDKMASLSLSN*