Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037476 | XP_024641248.2 | 65.909 | 176 | 59 | 1 | 31 | 205 | 16 | 191 | 1.05e-67 | 244 |
MsaG037476 | XP_024641248.2 | 73.538 | 359 | 95 | 0 | 205 | 563 | 398 | 756 | 0.0 | 559 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037476 | sp|Q9SY66|FRS11_ARATH | 42.509 | 287 | 163 | 2 | 205 | 490 | 394 | 679 | 4.77e-72 | 246 |
MsaG037476 | sp|Q9SY66|FRS11_ARATH | 40.323 | 186 | 98 | 6 | 30 | 208 | 11 | 190 | 6.55e-27 | 119 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037476 | tr|A0A396JX52|A0A396JX52_MEDTR | 65.909 | 176 | 59 | 1 | 31 | 205 | 16 | 191 | 5.00e-68 | 244 |
MsaG037476 | tr|A0A396JX52|A0A396JX52_MEDTR | 73.538 | 359 | 95 | 0 | 205 | 563 | 398 | 756 | 0.0 | 559 |
Gene ID | Type | Classification |
---|---|---|
MsaG037476 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037476 | MtrunA17_Chr1g0198761 | 73.538 | 359 | 95 | 0 | 205 | 563 | 398 | 756 | 0.0 | 559 |
MsaG037476 | MtrunA17_Chr1g0198761 | 65.909 | 176 | 59 | 1 | 31 | 205 | 16 | 191 | 9.63e-72 | 244 |
MsaG037476 | MtrunA17_Chr5g0431001 | 86.341 | 205 | 28 | 0 | 1 | 205 | 1 | 205 | 1.69e-124 | 375 |
MsaG037476 | MtrunA17_Chr5g0431001 | 95.775 | 71 | 3 | 0 | 205 | 275 | 412 | 482 | 1.05e-38 | 148 |
MsaG037476 | MtrunA17_Chr2g0276841 | 45.055 | 273 | 144 | 3 | 205 | 474 | 416 | 685 | 1.25e-72 | 245 |
MsaG037476 | MtrunA17_Chr2g0276841 | 42.282 | 149 | 81 | 2 | 60 | 208 | 69 | 212 | 1.83e-28 | 120 |
MsaG037476 | MtrunA17_Chr2g0294841 | 35.475 | 358 | 203 | 5 | 205 | 540 | 394 | 745 | 5.85e-68 | 234 |
MsaG037476 | MtrunA17_Chr2g0294841 | 41.447 | 152 | 81 | 3 | 60 | 208 | 44 | 190 | 2.06e-23 | 104 |
MsaG037476 | MtrunA17_Chr2g0290391 | 44.326 | 282 | 137 | 4 | 205 | 476 | 405 | 676 | 5.76e-66 | 227 |
MsaG037476 | MtrunA17_Chr2g0290391 | 45.946 | 148 | 73 | 1 | 61 | 208 | 51 | 191 | 2.77e-33 | 135 |
MsaG037476 | MtrunA17_Chr5g0430921 | 95.294 | 85 | 4 | 0 | 473 | 557 | 1 | 85 | 4.36e-51 | 170 |
MsaG037476 | MtrunA17_Chr1g0202341 | 29.965 | 287 | 180 | 5 | 212 | 485 | 398 | 676 | 4.59e-29 | 122 |
MsaG037476 | MtrunA17_Chr3g0080351 | 29.583 | 240 | 162 | 4 | 186 | 420 | 387 | 624 | 3.13e-26 | 114 |
MsaG037476 | MtrunA17_Chr2g0296781 | 28.228 | 333 | 212 | 9 | 205 | 517 | 332 | 657 | 6.70e-26 | 112 |
MsaG037476 | MtrunA17_Chr6g0477261 | 28.875 | 329 | 203 | 9 | 205 | 511 | 221 | 540 | 1.81e-25 | 110 |
MsaG037476 | MtrunA17_Chr5g0448761 | 29.911 | 224 | 149 | 2 | 212 | 427 | 414 | 637 | 2.04e-24 | 108 |
MsaG037476 | MtrunA17_Chr2g0329031 | 25.076 | 331 | 230 | 6 | 205 | 527 | 345 | 665 | 6.96e-24 | 106 |
MsaG037476 | MtrunA17_Chr1g0207551 | 30.047 | 213 | 144 | 3 | 212 | 420 | 379 | 590 | 5.04e-23 | 103 |
MsaG037476 | MtrunA17_Chr5g0440451 | 25.436 | 287 | 198 | 5 | 209 | 488 | 392 | 669 | 6.27e-22 | 100 |
MsaG037476 | MtrunA17_Chr1g0196541 | 29.730 | 222 | 146 | 3 | 205 | 416 | 332 | 553 | 9.08e-21 | 96.7 |
MsaG037476 | MtrunA17_Chr5g0448511 | 26.087 | 207 | 149 | 1 | 212 | 414 | 186 | 392 | 4.58e-20 | 94.0 |
MsaG037476 | MtrunA17_Chr2g0291581 | 26.102 | 295 | 178 | 5 | 213 | 478 | 404 | 687 | 7.91e-20 | 93.6 |
MsaG037476 | MtrunA17_Chr3g0082121 | 29.524 | 210 | 144 | 4 | 213 | 420 | 384 | 591 | 1.37e-19 | 92.8 |
MsaG037476 | MtrunA17_Chr5g0441581 | 27.149 | 221 | 152 | 3 | 205 | 416 | 360 | 580 | 6.85e-19 | 90.5 |
MsaG037476 | MtrunA17_Chr6g0458391 | 25.822 | 213 | 153 | 2 | 212 | 420 | 555 | 766 | 1.32e-18 | 89.7 |
MsaG037476 | MtrunA17_Chr6g0458391 | 30.000 | 130 | 81 | 3 | 58 | 187 | 222 | 341 | 1.21e-11 | 67.8 |
MsaG037476 | MtrunA17_Chr2g0324011 | 28.947 | 228 | 154 | 5 | 197 | 418 | 342 | 567 | 1.73e-18 | 89.0 |
MsaG037476 | MtrunA17_Chr2g0308841 | 26.066 | 211 | 151 | 3 | 211 | 416 | 14 | 224 | 2.20e-18 | 85.5 |
MsaG037476 | MtrunA17_Chr3g0118611 | 27.488 | 211 | 145 | 3 | 209 | 414 | 289 | 496 | 6.30e-18 | 87.8 |
MsaG037476 | MtrunA17_Chr1g0203721 | 22.831 | 219 | 166 | 1 | 205 | 420 | 406 | 624 | 7.79e-18 | 87.4 |
MsaG037476 | MtrunA17_Chr2g0287061 | 22.642 | 265 | 185 | 3 | 205 | 464 | 485 | 734 | 2.22e-17 | 85.9 |
MsaG037476 | MtrunA17_Chr1g0203051 | 27.861 | 201 | 140 | 3 | 211 | 406 | 421 | 621 | 3.32e-17 | 85.1 |
MsaG037476 | MtrunA17_Chr8g0363841 | 22.654 | 309 | 209 | 7 | 182 | 470 | 337 | 635 | 2.05e-16 | 82.8 |
MsaG037476 | MtrunA17_Chr2g0287651 | 23.392 | 342 | 236 | 9 | 212 | 542 | 420 | 746 | 7.94e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG037476 | AT1G10240.2 | 42.509 | 287 | 163 | 2 | 205 | 490 | 394 | 679 | 4.85e-73 | 246 |
MsaG037476 | AT1G10240.2 | 40.323 | 186 | 98 | 6 | 30 | 208 | 11 | 190 | 6.66e-28 | 119 |
MsaG037476 | AT1G10240.1 | 42.509 | 287 | 163 | 2 | 205 | 490 | 394 | 679 | 4.85e-73 | 246 |
MsaG037476 | AT1G10240.1 | 40.323 | 186 | 98 | 6 | 30 | 208 | 11 | 190 | 6.66e-28 | 119 |
MsaG037476 | AT5G28530.5 | 37.405 | 262 | 157 | 2 | 211 | 471 | 352 | 607 | 1.42e-52 | 189 |
MsaG037476 | AT5G28530.5 | 44.571 | 175 | 88 | 2 | 31 | 205 | 27 | 192 | 2.81e-39 | 152 |
MsaG037476 | AT5G28530.3 | 37.405 | 262 | 157 | 2 | 211 | 471 | 415 | 670 | 3.35e-52 | 189 |
MsaG037476 | AT5G28530.3 | 44.571 | 175 | 88 | 2 | 31 | 205 | 27 | 192 | 4.50e-39 | 152 |
MsaG037476 | AT5G28530.2 | 37.405 | 262 | 157 | 2 | 211 | 471 | 415 | 670 | 3.35e-52 | 189 |
MsaG037476 | AT5G28530.2 | 44.571 | 175 | 88 | 2 | 31 | 205 | 27 | 192 | 4.50e-39 | 152 |
MsaG037476 | AT5G28530.4 | 37.023 | 262 | 162 | 2 | 211 | 471 | 352 | 611 | 5.37e-52 | 188 |
MsaG037476 | AT5G28530.4 | 44.571 | 175 | 88 | 2 | 31 | 205 | 27 | 192 | 2.53e-39 | 152 |
MsaG037476 | AT5G28530.1 | 37.023 | 262 | 162 | 2 | 211 | 471 | 415 | 674 | 1.34e-51 | 188 |
MsaG037476 | AT5G28530.1 | 44.571 | 175 | 88 | 2 | 31 | 205 | 27 | 192 | 4.25e-39 | 152 |
MsaG037476 | AT4G15090.1 | 27.385 | 325 | 212 | 8 | 212 | 520 | 399 | 715 | 2.14e-27 | 117 |
MsaG037476 | AT4G15090.5 | 27.385 | 325 | 212 | 8 | 212 | 520 | 399 | 715 | 2.14e-27 | 117 |
MsaG037476 | AT4G15090.3 | 27.385 | 325 | 212 | 8 | 212 | 520 | 399 | 715 | 2.14e-27 | 117 |
MsaG037476 | AT4G15090.2 | 27.385 | 325 | 212 | 8 | 212 | 520 | 399 | 715 | 2.14e-27 | 117 |
MsaG037476 | AT4G15090.4 | 27.385 | 325 | 212 | 8 | 212 | 520 | 399 | 715 | 2.14e-27 | 117 |
MsaG037476 | AT4G38170.1 | 30.455 | 220 | 149 | 2 | 205 | 420 | 181 | 400 | 2.15e-26 | 113 |
MsaG037476 | AT4G38180.1 | 31.507 | 219 | 144 | 2 | 209 | 421 | 420 | 638 | 3.17e-26 | 114 |
MsaG037476 | AT3G22170.2 | 26.493 | 268 | 181 | 6 | 212 | 472 | 408 | 666 | 1.09e-23 | 106 |
MsaG037476 | AT3G22170.1 | 26.493 | 268 | 181 | 6 | 212 | 472 | 408 | 666 | 1.09e-23 | 106 |
MsaG037476 | AT1G76320.1 | 27.014 | 211 | 153 | 1 | 205 | 414 | 329 | 539 | 1.52e-22 | 102 |
MsaG037476 | AT1G76320.4 | 27.014 | 211 | 153 | 1 | 205 | 414 | 329 | 539 | 1.52e-22 | 102 |
MsaG037476 | AT1G76320.2 | 27.014 | 211 | 153 | 1 | 205 | 414 | 329 | 539 | 1.56e-22 | 102 |
MsaG037476 | AT1G76320.3 | 27.014 | 211 | 153 | 1 | 205 | 414 | 329 | 539 | 1.82e-22 | 102 |
MsaG037476 | AT5G18960.2 | 25.271 | 277 | 191 | 5 | 205 | 475 | 513 | 779 | 1.83e-20 | 96.3 |
MsaG037476 | AT5G18960.1 | 25.271 | 277 | 191 | 5 | 205 | 475 | 513 | 779 | 1.83e-20 | 96.3 |
MsaG037476 | AT2G27110.2 | 26.592 | 267 | 181 | 7 | 209 | 468 | 367 | 625 | 2.89e-20 | 95.5 |
MsaG037476 | AT2G27110.1 | 26.592 | 267 | 181 | 7 | 209 | 468 | 367 | 625 | 2.89e-20 | 95.5 |
MsaG037476 | AT2G27110.3 | 27.341 | 267 | 179 | 8 | 209 | 468 | 222 | 480 | 3.25e-20 | 95.1 |
MsaG037476 | AT2G32250.5 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 2.44e-19 | 92.4 |
MsaG037476 | AT2G32250.7 | 24.096 | 332 | 226 | 5 | 171 | 484 | 247 | 570 | 2.72e-19 | 92.4 |
MsaG037476 | AT2G32250.8 | 24.096 | 332 | 226 | 5 | 171 | 484 | 247 | 570 | 2.77e-19 | 92.4 |
MsaG037476 | AT2G32250.6 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 3.05e-19 | 92.4 |
MsaG037476 | AT2G32250.1 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 3.05e-19 | 92.4 |
MsaG037476 | AT2G32250.3 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 3.05e-19 | 92.4 |
MsaG037476 | AT2G32250.2 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 3.07e-19 | 92.4 |
MsaG037476 | AT2G32250.4 | 24.096 | 332 | 226 | 5 | 171 | 484 | 288 | 611 | 3.07e-19 | 92.4 |
MsaG037476 | AT4G19990.1 | 25.701 | 214 | 152 | 3 | 211 | 418 | 289 | 501 | 9.38e-19 | 90.5 |
MsaG037476 | AT4G19990.3 | 25.000 | 228 | 164 | 3 | 197 | 418 | 332 | 558 | 9.58e-19 | 90.5 |
MsaG037476 | AT4G19990.4 | 25.000 | 228 | 164 | 3 | 197 | 418 | 332 | 558 | 9.58e-19 | 90.5 |
MsaG037476 | AT4G19990.5 | 25.701 | 214 | 152 | 3 | 211 | 418 | 346 | 558 | 1.13e-18 | 90.5 |
MsaG037476 | AT4G19990.7 | 25.000 | 228 | 164 | 3 | 197 | 418 | 346 | 572 | 1.20e-18 | 90.5 |
MsaG037476 | AT4G19990.6 | 25.701 | 214 | 152 | 3 | 211 | 418 | 346 | 558 | 1.39e-18 | 90.1 |
MsaG037476 | AT4G19990.2 | 25.701 | 214 | 152 | 3 | 211 | 418 | 346 | 558 | 1.39e-18 | 90.1 |
MsaG037476 | AT3G06250.2 | 23.636 | 220 | 161 | 2 | 205 | 420 | 489 | 705 | 1.84e-18 | 89.7 |
MsaG037476 | AT3G06250.1 | 23.636 | 220 | 161 | 2 | 205 | 420 | 489 | 705 | 1.84e-18 | 89.7 |
MsaG037476 | AT3G06250.3 | 23.636 | 220 | 161 | 2 | 205 | 420 | 489 | 705 | 1.84e-18 | 89.7 |
MsaG037476 | AT1G52520.1 | 27.542 | 236 | 139 | 5 | 204 | 417 | 411 | 636 | 6.49e-18 | 87.8 |
MsaG037476 | AT1G80010.1 | 27.434 | 226 | 148 | 8 | 205 | 417 | 437 | 659 | 7.21e-14 | 75.1 |
Find 87 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTATTACATGACTAGATTT+TGG | 0.131548 | 7:-58966878 | None:intergenic |
TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 7:+58966246 | MsaT037476.1:CDS |
CCAATTAAAACTTACTTATT+AGG | 0.177601 | 7:-58967277 | None:intergenic |
TTCTCACAACCGCGAGTTAT+TGG | 0.184751 | 7:+58965634 | MsaT037476.1:CDS |
ATCACATGTTCTTGAGTTTC+AGG | 0.210618 | 7:-58967034 | None:intergenic |
CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 7:-58966600 | None:intergenic |
TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 7:+58965368 | MsaT037476.1:CDS |
AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 7:-58966363 | None:intergenic |
AATATCATCATAAAGATAAA+AGG | 0.310779 | 7:+58967007 | MsaT037476.1:CDS |
TCAAGAACATGTGATTGATT+TGG | 0.314506 | 7:+58967042 | MsaT037476.1:CDS |
GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 7:-58967148 | None:intergenic |
ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 7:-58967170 | None:intergenic |
TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 7:+58966928 | MsaT037476.1:CDS |
AACGTCACAGTCAGCATTGT+TGG | 0.377007 | 7:-58967077 | None:intergenic |
ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 7:+58966200 | MsaT037476.1:CDS |
GTAGTTACTAAGAGAAGAAT+TGG | 0.389295 | 7:+58965575 | MsaT037476.1:CDS |
AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 7:+58966199 | MsaT037476.1:CDS |
CCTCAAGTCACTAACATTGA+TGG | 0.399508 | 7:+58965179 | MsaT037476.1:CDS |
TTTGCTGGAATGACAACAAC+AGG | 0.405299 | 7:+58966296 | MsaT037476.1:CDS |
TCAAATATTTGCCCTTCAAA+AGG | 0.411166 | 7:-58965209 | None:intergenic |
ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 7:+58965447 | MsaT037476.1:CDS |
AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 7:+58966194 | MsaT037476.1:CDS |
TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 7:+58966265 | MsaT037476.1:CDS |
TATACGACCACCATCAACTT+TGG | 0.437731 | 7:-58966690 | None:intergenic |
GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 7:-58966560 | None:intergenic |
TGATTAGTTCCACCACAATC+TGG | 0.446933 | 7:-58967196 | None:intergenic |
AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 7:+58966964 | MsaT037476.1:CDS |
CATGTAATAAACTGCAATGA+TGG | 0.453622 | 7:+58966890 | MsaT037476.1:CDS |
GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 7:+58965476 | MsaT037476.1:CDS |
ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 7:-58965698 | None:intergenic |
CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 7:+58966205 | MsaT037476.1:CDS |
TATAAGACTTACAGGGCAAC+CGG | 0.483233 | 7:-58965738 | None:intergenic |
AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 7:+58967118 | MsaT037476.1:CDS |
TTGATAGGATCATGAAGGGT+TGG | 0.498564 | 7:+58967364 | MsaT037476.1:intron |
TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 7:-58966593 | None:intergenic |
CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 7:+58967184 | MsaT037476.1:CDS |
TACTTATTAGGAGATTGATA+AGG | 0.505158 | 7:-58967265 | None:intergenic |
CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 7:+58967133 | MsaT037476.1:CDS |
CTTTCTCGTCTCCATCGAAA+AGG | 0.515070 | 7:-58966845 | None:intergenic |
GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 7:+58966482 | MsaT037476.1:CDS |
ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 7:-58965680 | None:intergenic |
ATGTTATTGACTTGAGGCAA+GGG | 0.525418 | 7:-58965281 | None:intergenic |
TAAGCAATGATGCTAGTGAT+TGG | 0.525487 | 7:+58965150 | MsaT037476.1:CDS |
ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 7:+58965502 | MsaT037476.1:CDS |
ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 7:+58965719 | MsaT037476.1:CDS |
CAACATCATACCAAAGTTGA+TGG | 0.538288 | 7:+58966680 | MsaT037476.1:CDS |
TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 7:+58966181 | MsaT037476.1:CDS |
TTGCACAACATAAGAGCCAT+TGG | 0.551354 | 7:-58966660 | None:intergenic |
CTCAAGTCACTAACATTGAT+GGG | 0.551567 | 7:+58965180 | MsaT037476.1:CDS |
TAAGAGAAGAATTGGCATTG+AGG | 0.553953 | 7:+58965583 | MsaT037476.1:CDS |
CGAGTTATTGGATGACAAAG+AGG | 0.556388 | 7:+58965646 | MsaT037476.1:CDS |
GTGCTTTGATAGGATCATGA+AGG | 0.556862 | 7:+58967359 | MsaT037476.1:intron |
CAAGTCAATAACATTGATGA+GGG | 0.558520 | 7:+58965290 | MsaT037476.1:CDS |
AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 7:-58966270 | None:intergenic |
ACATGTGATTGATTTGGAAG+AGG | 0.565753 | 7:+58967048 | MsaT037476.1:CDS |
GGAAAATGTGTTGTAATCTG+AGG | 0.568974 | 7:-58966539 | None:intergenic |
ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 7:+58965553 | MsaT037476.1:CDS |
ATGTTAGTGACTTGAGGCAA+GGG | 0.572230 | 7:-58965173 | None:intergenic |
GTGTCAGAAGAGAATCCATC+GGG | 0.572540 | 7:+58965434 | MsaT037476.1:CDS |
TCATCAATGTTATTGACTTG+AGG | 0.573525 | 7:-58965287 | None:intergenic |
TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 7:+58966490 | MsaT037476.1:CDS |
AATGTTATTGACTTGAGGCA+AGG | 0.580693 | 7:-58965282 | None:intergenic |
AGTCACTAACATTGATGGGT+GGG | 0.589348 | 7:+58965184 | MsaT037476.1:CDS |
AATGTTAGTGACTTGAGGCA+AGG | 0.597462 | 7:-58965174 | None:intergenic |
AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 7:+58965467 | MsaT037476.1:CDS |
TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 7:-58965449 | None:intergenic |
GCAGCAATTGAAGCTGCCAA+TGG | 0.600590 | 7:+58966644 | MsaT037476.1:CDS |
TCAAGTCAATAACATTGATG+AGG | 0.603097 | 7:+58965289 | MsaT037476.1:CDS |
CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 7:+58965513 | MsaT037476.1:CDS |
AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 7:+58967137 | MsaT037476.1:CDS |
CCATCAATGTTAGTGACTTG+AGG | 0.613145 | 7:-58965179 | None:intergenic |
CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 7:-58966253 | None:intergenic |
TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 7:-58966252 | None:intergenic |
GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 7:+58965470 | MsaT037476.1:CDS |
AAGTCACTAACATTGATGGG+TGG | 0.624878 | 7:+58965183 | MsaT037476.1:CDS |
TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 7:+58965448 | MsaT037476.1:CDS |
CTTTGTCATCCAATAACTCG+CGG | 0.626544 | 7:-58965643 | None:intergenic |
TGTGTCAGAAGAGAATCCAT+CGG | 0.632507 | 7:+58965433 | MsaT037476.1:CDS |
TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 7:+58967187 | MsaT037476.1:CDS |
AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 7:+58967136 | MsaT037476.1:CDS |
TAGAGACTGAAATTTAGCAG+AGG | 0.662901 | 7:-58966915 | None:intergenic |
TGCTTTGATAGGATCATGAA+GGG | 0.676443 | 7:+58967360 | MsaT037476.1:intron |
CATCATACCAAAGTTGATGG+TGG | 0.683172 | 7:+58966683 | MsaT037476.1:CDS |
AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 7:+58967138 | MsaT037476.1:CDS |
AAGTCAATAACATTGATGAG+GGG | 0.714581 | 7:+58965291 | MsaT037476.1:CDS |
ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 7:-58966576 | None:intergenic |
TCTGGAACATGACAACGACG+AGG | 0.797744 | 7:-58967178 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 58965137 | 58967392 | 58965137 | ID=MsaG037476 |
Chr7 | mRNA | 58965137 | 58967392 | 58965137 | ID=MsaT037476.1;Parent=MsaG037476 |
Chr7 | exon | 58965137 | 58965748 | 58965137 | ID=MsaT037476.1.exon1;Parent=MsaT037476.1 |
Chr7 | CDS | 58965137 | 58965748 | 58965137 | ID=cds.MsaT037476.1;Parent=MsaT037476.1 |
Chr7 | exon | 58966152 | 58966394 | 58966152 | ID=MsaT037476.1.exon2;Parent=MsaT037476.1 |
Chr7 | CDS | 58966152 | 58966394 | 58966152 | ID=cds.MsaT037476.1;Parent=MsaT037476.1 |
Chr7 | exon | 58966470 | 58967284 | 58966470 | ID=MsaT037476.1.exon3;Parent=MsaT037476.1 |
Chr7 | CDS | 58966470 | 58967284 | 58966470 | ID=cds.MsaT037476.1;Parent=MsaT037476.1 |
Chr7 | exon | 58967371 | 58967392 | 58967371 | ID=MsaT037476.1.exon4;Parent=MsaT037476.1 |
Chr7 | CDS | 58967371 | 58967392 | 58967371 | ID=cds.MsaT037476.1;Parent=MsaT037476.1 |
Gene Sequence |
Protein sequence |