Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG037618 | XP_013448812.1 | 92.068 | 353 | 23 | 2 | 1 | 353 | 1 | 348 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG037618 | sp|Q9M2U1|DOF36_ARATH | 38.736 | 364 | 147 | 17 | 1 | 338 | 1 | 314 | 1.73e-50 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG037618 | tr|A0A072TZB1|A0A072TZB1_MEDTR | 92.068 | 353 | 23 | 2 | 1 | 353 | 1 | 348 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG037618 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG037618 | MtrunA17_Chr7g0237921 | 92.068 | 353 | 23 | 2 | 1 | 353 | 1 | 348 | 0.0 | 552 |
| MsaG037618 | MtrunA17_Chr4g0010151 | 48.303 | 383 | 125 | 16 | 1 | 340 | 1 | 353 | 1.97e-88 | 270 |
| MsaG037618 | MtrunA17_Chr4g0031411 | 43.266 | 349 | 160 | 12 | 1 | 329 | 1 | 331 | 6.49e-72 | 227 |
| MsaG037618 | MtrunA17_Chr7g0223311 | 55.479 | 146 | 57 | 4 | 1 | 142 | 1 | 142 | 1.14e-44 | 157 |
| MsaG037618 | MtrunA17_Chr2g0328021 | 40.076 | 262 | 118 | 11 | 1 | 260 | 1 | 225 | 2.49e-44 | 154 |
| MsaG037618 | MtrunA17_Chr8g0374251 | 68.421 | 76 | 23 | 1 | 77 | 152 | 69 | 143 | 1.53e-31 | 121 |
| MsaG037618 | MtrunA17_Chr3g0126201 | 63.750 | 80 | 29 | 0 | 57 | 136 | 32 | 111 | 1.08e-30 | 119 |
| MsaG037618 | MtrunA17_Chr3g0127201 | 66.667 | 75 | 21 | 1 | 57 | 131 | 12 | 82 | 4.60e-30 | 116 |
| MsaG037618 | MtrunA17_Chr5g0411951 | 59.633 | 109 | 39 | 1 | 73 | 181 | 40 | 143 | 1.06e-29 | 116 |
| MsaG037618 | MtrunA17_Chr3g0117601 | 63.636 | 88 | 25 | 3 | 43 | 126 | 27 | 111 | 1.21e-29 | 116 |
| MsaG037618 | MtrunA17_Chr2g0326001 | 78.689 | 61 | 13 | 0 | 70 | 130 | 34 | 94 | 1.37e-29 | 115 |
| MsaG037618 | MtrunA17_Chr8g0367161 | 73.438 | 64 | 17 | 0 | 72 | 135 | 28 | 91 | 2.08e-29 | 115 |
| MsaG037618 | MtrunA17_Chr8g0374111 | 60.377 | 106 | 25 | 4 | 55 | 152 | 17 | 113 | 2.09e-29 | 113 |
| MsaG037618 | MtrunA17_Chr4g0030051 | 81.356 | 59 | 11 | 0 | 70 | 128 | 35 | 93 | 3.41e-29 | 114 |
| MsaG037618 | MtrunA17_Chr2g0282441 | 67.606 | 71 | 22 | 1 | 58 | 127 | 6 | 76 | 1.38e-28 | 113 |
| MsaG037618 | MtrunA17_Chr4g0061761 | 90.000 | 50 | 5 | 0 | 77 | 126 | 41 | 90 | 4.42e-28 | 111 |
| MsaG037618 | MtrunA17_Chr8g0341671 | 73.913 | 69 | 15 | 2 | 68 | 136 | 13 | 78 | 4.99e-28 | 108 |
| MsaG037618 | MtrunA17_Chr8g0346551 | 71.014 | 69 | 16 | 1 | 78 | 142 | 26 | 94 | 5.94e-28 | 110 |
| MsaG037618 | MtrunA17_Chr1g0177251 | 80.357 | 56 | 11 | 0 | 75 | 130 | 11 | 66 | 6.12e-28 | 110 |
| MsaG037618 | MtrunA17_Chr2g0282511 | 89.583 | 48 | 5 | 0 | 77 | 124 | 46 | 93 | 9.62e-27 | 107 |
| MsaG037618 | MtrunA17_Chr2g0282051 | 65.278 | 72 | 16 | 2 | 69 | 132 | 31 | 101 | 1.61e-26 | 106 |
| MsaG037618 | MtrunA17_Chr1g0188851 | 52.439 | 82 | 37 | 1 | 53 | 132 | 18 | 99 | 4.30e-26 | 105 |
| MsaG037618 | MtrunA17_Chr4g0047761 | 81.818 | 55 | 9 | 1 | 78 | 132 | 74 | 127 | 4.79e-26 | 106 |
| MsaG037618 | MtrunA17_Chr2g0308011 | 87.500 | 48 | 6 | 0 | 77 | 124 | 38 | 85 | 9.28e-26 | 102 |
| MsaG037618 | MtrunA17_Chr6g0453321 | 71.429 | 56 | 16 | 0 | 78 | 133 | 138 | 193 | 2.69e-23 | 100 |
| MsaG037618 | MtrunA17_Chr3g0092111 | 68.421 | 57 | 18 | 0 | 78 | 134 | 138 | 194 | 4.45e-23 | 99.8 |
| MsaG037618 | MtrunA17_Chr7g0217581 | 61.194 | 67 | 26 | 0 | 78 | 144 | 234 | 300 | 6.40e-23 | 100 |
| MsaG037618 | MtrunA17_Chr8g0355261 | 68.519 | 54 | 17 | 0 | 78 | 131 | 120 | 173 | 7.17e-23 | 99.0 |
| MsaG037618 | MtrunA17_Chr2g0283811 | 53.247 | 77 | 33 | 1 | 78 | 154 | 49 | 122 | 7.90e-23 | 93.6 |
| MsaG037618 | MtrunA17_Chr7g0254161 | 42.105 | 114 | 55 | 1 | 77 | 179 | 102 | 215 | 9.22e-23 | 98.6 |
| MsaG037618 | MtrunA17_Chr6g0460721 | 66.667 | 54 | 18 | 0 | 77 | 130 | 90 | 143 | 4.39e-22 | 95.5 |
| MsaG037618 | MtrunA17_Chr4g0042481 | 69.231 | 52 | 16 | 0 | 78 | 129 | 124 | 175 | 4.73e-22 | 96.7 |
| MsaG037618 | MtrunA17_Chr5g0417561 | 58.667 | 75 | 25 | 1 | 78 | 152 | 121 | 189 | 1.65e-21 | 94.4 |
| MsaG037618 | MtrunA17_Chr5g0417571 | 61.290 | 62 | 24 | 0 | 78 | 139 | 140 | 201 | 1.99e-21 | 93.6 |
| MsaG037618 | MtrunA17_Chr5g0417551 | 66.102 | 59 | 20 | 0 | 78 | 136 | 129 | 187 | 7.33e-21 | 92.4 |
| MsaG037618 | MtrunA17_Chr6g0460731 | 57.377 | 61 | 24 | 1 | 71 | 129 | 89 | 149 | 9.34e-21 | 92.0 |
| MsaG037618 | MtrunA17_Chr5g0417601 | 69.231 | 52 | 16 | 0 | 78 | 129 | 142 | 193 | 1.35e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG037618 | AT3G55370.2 | 38.320 | 381 | 156 | 18 | 1 | 338 | 1 | 345 | 1.54e-52 | 177 |
| MsaG037618 | AT3G55370.1 | 38.736 | 364 | 147 | 17 | 1 | 338 | 1 | 314 | 1.76e-51 | 174 |
| MsaG037618 | AT3G55370.3 | 40.645 | 310 | 123 | 14 | 48 | 338 | 92 | 359 | 1.35e-46 | 162 |
| MsaG037618 | AT2G37590.1 | 40.217 | 276 | 108 | 9 | 1 | 240 | 1 | 255 | 2.82e-45 | 158 |
| MsaG037618 | AT5G02460.1 | 86.842 | 76 | 10 | 0 | 55 | 130 | 74 | 149 | 7.86e-44 | 156 |
| MsaG037618 | AT1G07640.1 | 73.418 | 79 | 21 | 0 | 58 | 136 | 3 | 81 | 1.00e-36 | 134 |
| MsaG037618 | AT1G07640.2 | 73.418 | 79 | 21 | 0 | 58 | 136 | 59 | 137 | 1.49e-36 | 135 |
| MsaG037618 | AT1G07640.3 | 73.418 | 79 | 21 | 0 | 58 | 136 | 67 | 145 | 1.93e-36 | 135 |
| MsaG037618 | AT2G28810.1 | 46.711 | 152 | 49 | 6 | 1 | 127 | 1 | 145 | 2.12e-34 | 129 |
| MsaG037618 | AT5G60200.1 | 69.880 | 83 | 22 | 1 | 73 | 152 | 52 | 134 | 4.21e-34 | 126 |
| MsaG037618 | AT5G60850.1 | 61.957 | 92 | 32 | 1 | 63 | 154 | 38 | 126 | 2.62e-32 | 123 |
| MsaG037618 | AT2G28810.2 | 74.648 | 71 | 17 | 1 | 58 | 127 | 58 | 128 | 3.44e-32 | 123 |
| MsaG037618 | AT3G52440.1 | 72.464 | 69 | 19 | 0 | 73 | 141 | 22 | 90 | 4.25e-31 | 118 |
| MsaG037618 | AT3G52440.2 | 72.464 | 69 | 19 | 0 | 73 | 141 | 41 | 109 | 6.67e-31 | 118 |
| MsaG037618 | AT3G45610.1 | 68.571 | 70 | 22 | 0 | 73 | 142 | 37 | 106 | 1.28e-30 | 117 |
| MsaG037618 | AT1G51700.1 | 67.500 | 80 | 24 | 2 | 69 | 147 | 27 | 105 | 5.10e-30 | 114 |
| MsaG037618 | AT5G65590.1 | 54.639 | 97 | 37 | 2 | 35 | 131 | 7 | 96 | 6.31e-30 | 117 |
| MsaG037618 | AT3G21270.1 | 48.905 | 137 | 57 | 3 | 77 | 213 | 30 | 153 | 2.03e-29 | 112 |
| MsaG037618 | AT1G28310.1 | 83.929 | 56 | 9 | 0 | 77 | 132 | 28 | 83 | 2.98e-29 | 115 |
| MsaG037618 | AT1G28310.2 | 83.929 | 56 | 9 | 0 | 77 | 132 | 52 | 107 | 4.71e-29 | 115 |
| MsaG037618 | AT1G21340.1 | 61.176 | 85 | 31 | 1 | 78 | 162 | 40 | 122 | 6.68e-29 | 112 |
| MsaG037618 | AT4G21050.1 | 39.881 | 168 | 73 | 4 | 74 | 213 | 22 | 189 | 2.55e-28 | 110 |
| MsaG037618 | AT5G62940.1 | 48.438 | 128 | 59 | 4 | 1 | 126 | 1 | 123 | 2.97e-28 | 113 |
| MsaG037618 | AT4G38000.1 | 62.651 | 83 | 29 | 1 | 70 | 152 | 35 | 115 | 7.35e-28 | 109 |
| MsaG037618 | AT5G66940.1 | 51.351 | 111 | 42 | 4 | 37 | 145 | 2 | 102 | 9.03e-28 | 108 |
| MsaG037618 | AT3G50410.1 | 57.471 | 87 | 34 | 2 | 50 | 133 | 2 | 88 | 1.10e-27 | 109 |
| MsaG037618 | AT3G61850.1 | 54.455 | 101 | 41 | 3 | 38 | 133 | 31 | 131 | 1.40e-27 | 110 |
| MsaG037618 | AT3G61850.2 | 54.455 | 101 | 41 | 3 | 38 | 133 | 19 | 119 | 1.40e-27 | 110 |
| MsaG037618 | AT3G61850.3 | 54.455 | 101 | 41 | 3 | 38 | 133 | 19 | 119 | 1.40e-27 | 110 |
| MsaG037618 | AT3G61850.5 | 54.455 | 101 | 41 | 3 | 38 | 133 | 19 | 119 | 1.98e-27 | 110 |
| MsaG037618 | AT3G61850.4 | 54.455 | 101 | 41 | 3 | 38 | 133 | 31 | 131 | 2.21e-27 | 110 |
| MsaG037618 | AT4G24060.1 | 72.131 | 61 | 17 | 0 | 70 | 130 | 47 | 107 | 2.49e-27 | 110 |
| MsaG037618 | AT2G28510.1 | 39.431 | 246 | 104 | 10 | 75 | 320 | 47 | 247 | 4.31e-26 | 105 |
| MsaG037618 | AT4G00940.1 | 74.576 | 59 | 14 | 1 | 72 | 130 | 65 | 122 | 5.78e-26 | 105 |
| MsaG037618 | AT4G00940.3 | 74.576 | 59 | 14 | 1 | 72 | 130 | 65 | 122 | 5.78e-26 | 105 |
| MsaG037618 | AT4G00940.2 | 74.576 | 59 | 14 | 1 | 72 | 130 | 65 | 122 | 5.78e-26 | 105 |
| MsaG037618 | AT1G64620.1 | 47.682 | 151 | 58 | 5 | 70 | 213 | 43 | 179 | 3.55e-24 | 102 |
| MsaG037618 | AT2G46590.1 | 77.358 | 53 | 10 | 1 | 73 | 123 | 63 | 115 | 9.52e-24 | 100 |
| MsaG037618 | AT2G46590.2 | 77.358 | 53 | 10 | 1 | 73 | 123 | 75 | 127 | 1.10e-23 | 100 |
| MsaG037618 | AT5G62430.1 | 73.077 | 52 | 14 | 0 | 78 | 129 | 56 | 107 | 1.64e-23 | 99.4 |
| MsaG037618 | AT3G47500.1 | 63.636 | 66 | 24 | 0 | 78 | 143 | 112 | 177 | 2.80e-23 | 100 |
| MsaG037618 | AT1G47655.1 | 78.723 | 47 | 10 | 0 | 78 | 124 | 31 | 77 | 1.53e-22 | 94.4 |
| MsaG037618 | AT1G26790.1 | 69.231 | 52 | 16 | 0 | 78 | 129 | 113 | 164 | 2.97e-22 | 97.1 |
| MsaG037618 | AT2G34140.1 | 71.154 | 52 | 15 | 0 | 78 | 129 | 60 | 111 | 3.23e-22 | 92.4 |
| MsaG037618 | AT1G29160.1 | 71.154 | 52 | 15 | 0 | 78 | 129 | 64 | 115 | 3.37e-22 | 92.4 |
| MsaG037618 | AT4G21040.1 | 72.727 | 55 | 14 | 1 | 78 | 132 | 27 | 80 | 5.25e-22 | 93.6 |
| MsaG037618 | AT5G39660.3 | 71.154 | 52 | 15 | 0 | 78 | 129 | 140 | 191 | 9.85e-22 | 96.3 |
| MsaG037618 | AT5G39660.1 | 71.154 | 52 | 15 | 0 | 78 | 129 | 140 | 191 | 9.85e-22 | 96.3 |
| MsaG037618 | AT5G39660.2 | 71.154 | 52 | 15 | 0 | 78 | 129 | 140 | 191 | 9.85e-22 | 96.3 |
| MsaG037618 | AT1G69570.1 | 69.231 | 52 | 16 | 0 | 78 | 129 | 134 | 185 | 2.66e-21 | 94.4 |
| MsaG037618 | AT4G21080.1 | 53.165 | 79 | 33 | 1 | 78 | 156 | 27 | 101 | 3.90e-21 | 91.7 |
| MsaG037618 | AT4G21030.1 | 42.667 | 75 | 43 | 0 | 74 | 148 | 19 | 93 | 1.15e-13 | 69.3 |
Find 111 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTCTCTCCCACCATATA+TGG | 0.222301 | 7:+61773937 | MsaT037618.1:CDS |
| CTCCAACCGGGACACTTCTA+AGG | 0.229004 | 7:-61774438 | None:intergenic |
| TTCCAATATTGTTCACTATT+AGG | 0.263046 | 7:-61775033 | None:intergenic |
| AAATAATTCTAGTGTGAAAA+TGG | 0.280136 | 7:+61774942 | MsaT037618.1:CDS |
| ATCTCATCGGTGGTGGCGTT+GGG | 0.300347 | 7:-61774576 | None:intergenic |
| TTCCATATCGGAAGCTCTTT+AGG | 0.302834 | 7:+61774694 | MsaT037618.1:CDS |
| GGTGATCACCTAAGTGAAAT+AGG | 0.308942 | 7:+61774622 | MsaT037618.1:CDS |
| ATCCTAATAGTGAACAATAT+TGG | 0.316935 | 7:+61775031 | MsaT037618.1:CDS |
| GAATCAATCTAGACAATTCT+TGG | 0.322625 | 7:+61774969 | MsaT037618.1:CDS |
| GCAAGGCTTGTCGAAGGTAT+TGG | 0.355195 | 7:+61774401 | MsaT037618.1:CDS |
| GTCTGAGCTTGCCGGCGACT+TGG | 0.355952 | 7:-61774509 | None:intergenic |
| AGTTGTTTGCAGAGCTAGTT+TGG | 0.357904 | 7:-61774534 | None:intergenic |
| CACCTAAAGAGCTTCCGATA+TGG | 0.360566 | 7:-61774696 | None:intergenic |
| GTTTGGCGGTCTGAGCTTGC+CGG | 0.381911 | 7:-61774517 | None:intergenic |
| CATGAGGTTGCGATGGTGTC+AGG | 0.399816 | 7:-61774225 | None:intergenic |
| ACCTGTTGATGCCAGTTGGC+TGG | 0.401216 | 7:-61773962 | None:intergenic |
| CAGTTGGCTGGATCCATATA+TGG | 0.404780 | 7:-61773950 | None:intergenic |
| AATCTCATCGGTGGTGGCGT+TGG | 0.416328 | 7:-61774577 | None:intergenic |
| GGAGACTTAAATTTCCATAT+CGG | 0.426564 | 7:+61774682 | MsaT037618.1:CDS |
| CTTCGACAACCACCTCCAAC+CGG | 0.428779 | 7:-61774451 | None:intergenic |
| TGAGCTTGCCGGCGACTTGG+AGG | 0.438606 | 7:-61774506 | None:intergenic |
| TCCAGCCAACTGGCATCAAC+AGG | 0.444071 | 7:+61773961 | MsaT037618.1:CDS |
| CTACTACAAATTCCAACTAT+AGG | 0.452160 | 7:+61775127 | MsaT037618.1:CDS |
| AAGGGAAATTGATGAGTTTG+TGG | 0.457842 | 7:-61774799 | None:intergenic |
| CCGCTACCACCACCTTCAAA+TGG | 0.459662 | 7:-61774865 | None:intergenic |
| AGTGAAATAGGACTAAACTA+TGG | 0.460875 | 7:+61774634 | MsaT037618.1:CDS |
| GCCCTATCTGCCATCGAACC+TGG | 0.462544 | 7:-61774262 | None:intergenic |
| GCCACCACCGATGAGATTCA+TGG | 0.464462 | 7:+61774582 | MsaT037618.1:CDS |
| AATCAATCTAGACAATTCTT+GGG | 0.469852 | 7:+61774970 | MsaT037618.1:CDS |
| GACCAGGTTCGATGGCAGAT+AGG | 0.475722 | 7:+61774260 | MsaT037618.1:CDS |
| TGCGTATGGTGGTGTGTCTA+AGG | 0.477118 | 7:+61774912 | MsaT037618.1:CDS |
| CATATATGGATCCAGCCAAC+TGG | 0.482920 | 7:+61773951 | MsaT037618.1:CDS |
| ATGGCTCCTTTGCATCATCT+AGG | 0.483090 | 7:+61774601 | MsaT037618.1:CDS |
| ATAAAGTTATGTCCTATAGT+TGG | 0.484745 | 7:-61775139 | None:intergenic |
| ACCAGGTTCGATGGCAGATA+GGG | 0.488883 | 7:+61774261 | MsaT037618.1:CDS |
| GAAGGTGGTGGTAGCGGTGG+TGG | 0.489455 | 7:+61774871 | MsaT037618.1:CDS |
| AGGTTCGATGGTTGAGGCTG+TGG | 0.490154 | 7:-61774205 | None:intergenic |
| TCTACTCCAATGGGAGGTGT+TGG | 0.490285 | 7:+61774661 | MsaT037618.1:CDS |
| TTCGACAAGCCTTGCAGAAG+TGG | 0.490902 | 7:-61774393 | None:intergenic |
| CATTGCTCAAAATTGCCAAC+AGG | 0.493075 | 7:-61774769 | None:intergenic |
| CCATTTGAAGGTGGTGGTAG+CGG | 0.496097 | 7:+61774865 | MsaT037618.1:CDS |
| CTTAGAAGTGTCCCGGTTGG+AGG | 0.496913 | 7:+61774439 | MsaT037618.1:CDS |
| AGAAGTGTCCCGGTTGGAGG+TGG | 0.505449 | 7:+61774442 | MsaT037618.1:CDS |
| TTAGGTGGAGGCGTTGGTAA+CGG | 0.512562 | 7:+61774712 | MsaT037618.1:CDS |
| AGTTTAGTCCTATTTCACTT+AGG | 0.513240 | 7:-61774630 | None:intergenic |
| AACGGTGGTGTCAACGGTGG+TGG | 0.514797 | 7:+61774730 | MsaT037618.1:CDS |
| GATGGTTGAGGCTGTGGTGG+TGG | 0.518267 | 7:-61774199 | None:intergenic |
| GGATTGTTGTATCCATTTGA+AGG | 0.522126 | 7:+61774853 | MsaT037618.1:CDS |
| TGGAATGCTTCTGCTGGTGG+TGG | 0.522977 | 7:+61775051 | MsaT037618.1:CDS |
| TGCGATGGTGTCAGGTTCGA+TGG | 0.530120 | 7:-61774217 | None:intergenic |
| AGCTTCTAAAGTTGACAAGA+AGG | 0.532028 | 7:-61774818 | None:intergenic |
| GTAGCAAAACTTTGTGTTGG+TGG | 0.539364 | 7:-61774341 | None:intergenic |
| GTAGTAGCAAAACTTTGTGT+TGG | 0.542073 | 7:-61774344 | None:intergenic |
| AGCTCTTTAGGTGGAGGCGT+TGG | 0.544707 | 7:+61774706 | MsaT037618.1:CDS |
| CTGACACCATCGCAACCTCA+TGG | 0.545229 | 7:+61774226 | MsaT037618.1:CDS |
| CTCGATCAGACCAGGTTCGA+TGG | 0.546965 | 7:+61774252 | MsaT037618.1:CDS |
| GCCATGAATCTCATCGGTGG+TGG | 0.547604 | 7:-61774583 | None:intergenic |
| CATGGAGGCTCGATCAGACC+AGG | 0.549550 | 7:+61774244 | MsaT037618.1:CDS |
| TTGTATCCATTTGAAGGTGG+TGG | 0.552400 | 7:+61774859 | MsaT037618.1:CDS |
| TGTCGAAGGTATTGGACAAA+GGG | 0.552845 | 7:+61774409 | MsaT037618.1:CDS |
| GCAGCCACGCCACTTCTGCA+AGG | 0.554356 | 7:+61774384 | MsaT037618.1:CDS |
| CAACAACACCTCCAAGTCGC+CGG | 0.555102 | 7:+61774498 | MsaT037618.1:CDS |
| ATCGGAAGCTCTTTAGGTGG+AGG | 0.559518 | 7:+61774700 | MsaT037618.1:CDS |
| ATTTACCTGTTGATGCCAGT+TGG | 0.559637 | 7:-61773966 | None:intergenic |
| GTTGGTAACGGTGGTGTCAA+CGG | 0.562708 | 7:+61774724 | MsaT037618.1:CDS |
| CAATATTGGAATGCTTCTGC+TGG | 0.566637 | 7:+61775045 | MsaT037618.1:CDS |
| TGGTGCCCTTAGAAGTGTCC+CGG | 0.567606 | 7:+61774432 | MsaT037618.1:CDS |
| GCCCTTAGAAGTGTCCCGGT+TGG | 0.569239 | 7:+61774436 | MsaT037618.1:CDS |
| TTCGATGGTTGAGGCTGTGG+TGG | 0.570012 | 7:-61774202 | None:intergenic |
| GTTGGGGAACTGAGTACCGC+AGG | 0.570283 | 7:-61774559 | None:intergenic |
| CATATCGGAAGCTCTTTAGG+TGG | 0.571600 | 7:+61774697 | MsaT037618.1:CDS |
| GATGGCAGATAGGGCAAGGA+TGG | 0.575021 | 7:+61774270 | MsaT037618.1:CDS |
| TAGACACACCACCATACGCA+TGG | 0.575174 | 7:-61774909 | None:intergenic |
| TCTCATCGGTGGTGGCGTTG+GGG | 0.576658 | 7:-61774575 | None:intergenic |
| TGTTTGCAGAGCTAGTTTGG+CGG | 0.578980 | 7:-61774531 | None:intergenic |
| AAGTCTCCAACACCTCCCAT+TGG | 0.579899 | 7:-61774667 | None:intergenic |
| TTAGAAGCTTCTTCTTCACA+TGG | 0.581519 | 7:+61774832 | MsaT037618.1:CDS |
| TATTGGAATGCTTCTGCTGG+TGG | 0.586587 | 7:+61775048 | MsaT037618.1:CDS |
| TTCGACAACCACCTCCAACC+GGG | 0.589154 | 7:-61774450 | None:intergenic |
| GCTTCTAAAGTTGACAAGAA+GGG | 0.589264 | 7:-61774817 | None:intergenic |
| CAAGCCTTGCAGAAGTGGCG+TGG | 0.593138 | 7:-61774388 | None:intergenic |
| GCAGCAACAAAATCATCAAG+TGG | 0.596192 | 7:+61774144 | MsaT037618.1:intron |
| TTGTCGAAGGTATTGGACAA+AGG | 0.596657 | 7:+61774408 | MsaT037618.1:CDS |
| GTGGTTGTCGAAGAAACAAA+AGG | 0.598438 | 7:+61774461 | MsaT037618.1:CDS |
| TTTGAAGGTGGTGGTAGCGG+TGG | 0.603652 | 7:+61774868 | MsaT037618.1:CDS |
| GAGCCTCCATGAGGTTGCGA+TGG | 0.604696 | 7:-61774232 | None:intergenic |
| GGTGTCAGGTTCGATGGTTG+AGG | 0.608734 | 7:-61774211 | None:intergenic |
| TTGGCTGGATCCATATATGG+TGG | 0.609224 | 7:-61773947 | None:intergenic |
| GTTCGATGGCAGATAGGGCA+AGG | 0.614474 | 7:+61774266 | MsaT037618.1:CDS |
| AGGACTGTTGACACTAGTGT+TGG | 0.616145 | 7:-61774167 | None:intergenic |
| TCCAACCGGGACACTTCTAA+GGG | 0.619326 | 7:-61774437 | None:intergenic |
| TTGTTGTATCCATTTGAAGG+TGG | 0.620036 | 7:+61774856 | MsaT037618.1:CDS |
| TGATCACCTAGATGATGCAA+AGG | 0.622493 | 7:-61774607 | None:intergenic |
| CGAAGGTATTGGACAAAGGG+TGG | 0.625409 | 7:+61774412 | MsaT037618.1:CDS |
| TGGCTGGATCCATATATGGT+GGG | 0.628650 | 7:-61773946 | None:intergenic |
| GGTGGAGGCGTTGGTAACGG+TGG | 0.630519 | 7:+61774715 | MsaT037618.1:CDS |
| AAAGGAGCCATGAATCTCAT+CGG | 0.638198 | 7:-61774589 | None:intergenic |
| ACTTCTGCAAGGCTTGTCGA+AGG | 0.638852 | 7:+61774395 | MsaT037618.1:CDS |
| TGTGGTGGTGGAATAAGTAG+AGG | 0.640901 | 7:-61774187 | None:intergenic |
| GCTGTAGAAAGATCTGTCCA+AGG | 0.641214 | 7:-61775087 | None:intergenic |
| GTGGTGCTACTAATTCACCT+TGG | 0.642878 | 7:+61775070 | MsaT037618.1:CDS |
| AGACACACCACCATACGCAT+GGG | 0.645170 | 7:-61774908 | None:intergenic |
| AATGATCAATCCCATGCGTA+TGG | 0.649437 | 7:+61774898 | MsaT037618.1:CDS |
| GATCAATCCCATGCGTATGG+TGG | 0.672453 | 7:+61774901 | MsaT037618.1:CDS |
| CTCTGCAAACAACTCTCCTG+CGG | 0.677430 | 7:+61774543 | MsaT037618.1:CDS |
| GTGTTGGTGGAATCACACCT+TGG | 0.687306 | 7:-61774328 | None:intergenic |
| GGTCTGATCGAGCCTCCATG+AGG | 0.689453 | 7:-61774241 | None:intergenic |
| GGAGCCATGAATCTCATCGG+TGG | 0.692277 | 7:-61774586 | None:intergenic |
| GGTAACGGTGGTGTCAACGG+TGG | 0.699310 | 7:+61774727 | MsaT037618.1:CDS |
| TGGGAGAGAAGTATAAACCA+TGG | 0.714065 | 7:-61773927 | None:intergenic |
| ACACCATCGCAACCTCATGG+AGG | 0.720835 | 7:+61774229 | MsaT037618.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 61773929 | 61775155 | 61773929 | ID=MsaG037618 |
| Chr7 | mRNA | 61773929 | 61775155 | 61773929 | ID=MsaT037618.1;Parent=MsaG037618 |
| Chr7 | exon | 61773929 | 61773982 | 61773929 | ID=MsaT037618.1.exon1;Parent=MsaT037618.1 |
| Chr7 | CDS | 61773929 | 61773982 | 61773929 | ID=cds.MsaT037618.1;Parent=MsaT037618.1 |
| Chr7 | exon | 61774148 | 61775155 | 61774148 | ID=MsaT037618.1.exon2;Parent=MsaT037618.1 |
| Chr7 | CDS | 61774148 | 61775155 | 61774148 | ID=cds.MsaT037618.1;Parent=MsaT037618.1 |
| Gene Sequence |
| Protein sequence |