AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG038279

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038279 MtrunA17_Chr2g0300441 87.845 181 22 0 1 181 1 181 9.48e-114 323
MsaG038279 MtrunA17_Chr1g0206721 76.503 183 43 0 1 183 1 183 1.19e-99 288
MsaG038279 MtrunA17_Chr2g0292791 77.348 181 41 0 1 181 1 181 2.32e-99 287
MsaG038279 MtrunA17_Chr7g0238991 87.500 160 20 0 24 183 36 195 1.49e-98 285
MsaG038279 MtrunA17_Chr1g0206991 73.481 181 48 0 1 181 1 181 2.71e-96 277
MsaG038279 MtrunA17_Chr8g0355091 74.863 183 46 0 1 183 1 183 3.55e-96 279
MsaG038279 MtrunA17_Chr3g0099421 73.770 183 48 0 1 183 26 208 5.83e-96 279
MsaG038279 MtrunA17_Chr1g0208561 74.317 183 39 1 1 183 1 175 4.26e-95 276
MsaG038279 MtrunA17_Chr1g0206701 74.033 181 47 0 1 181 1 181 7.11e-95 275
MsaG038279 MtrunA17_Chr1g0149391 73.224 183 49 0 1 183 1 183 2.06e-94 274
MsaG038279 MtrunA17_Chr3g0089141 74.317 183 39 1 1 183 1 175 2.60e-94 274
MsaG038279 MtrunA17_Chr2g0325971 73.770 183 40 1 1 183 1 175 6.74e-92 268
MsaG038279 MtrunA17_Chr1g0208581 71.038 183 45 1 1 183 1 175 7.91e-89 260
MsaG038279 MtrunA17_Chr1g0187361 67.213 183 60 0 1 183 1 183 7.84e-87 255
MsaG038279 MtrunA17_Chr1g0188671 64.481 183 65 0 1 183 39 221 4.03e-82 244
MsaG038279 MtrunA17_Chr2g0317481 62.842 183 68 0 1 183 1 183 2.53e-79 236
MsaG038279 MtrunA17_Chr2g0317451 62.842 183 68 0 1 183 1 183 2.59e-79 236
MsaG038279 MtrunA17_Chr5g0422421 67.816 174 56 0 1 174 1 174 5.44e-79 235
MsaG038279 MtrunA17_Chr1g0206691 68.072 166 53 0 18 183 1 166 9.63e-79 234
MsaG038279 MtrunA17_Chr3g0099411 66.667 183 42 2 1 183 1 164 2.90e-78 233
MsaG038279 MtrunA17_Chr5g0419601 63.388 183 67 0 1 183 1 183 4.10e-78 233
MsaG038279 MtrunA17_Chr5g0422941 60.656 183 72 0 1 183 1 183 1.44e-75 226
MsaG038279 MtrunA17_Chr3g0089151 83.333 132 22 0 1 132 1 132 1.83e-75 223
MsaG038279 MtrunA17_Chr2g0300421 73.881 134 35 0 1 134 1 134 3.45e-65 198
MsaG038279 MtrunA17_Chr3g0085241 48.295 176 91 0 3 178 35 210 5.56e-56 177
MsaG038279 MtrunA17_Chr3g0119901 53.289 152 71 0 9 160 9 160 1.44e-55 175
MsaG038279 MtrunA17_Chr3g0111931 62.136 103 39 0 21 123 2 104 5.03e-41 134
MsaG038279 MtrunA17_Chr8g0379021 39.429 175 96 2 5 176 8 175 3.78e-35 122
MsaG038279 MtrunA17_Chr2g0333981 38.037 163 97 1 5 167 8 166 9.60e-34 118
MsaG038279 MtrunA17_Chr1g0187351 77.273 66 15 0 18 83 1 66 2.89e-32 111
MsaG038279 MtrunA17_Chr4g0018951 44.516 155 74 3 5 159 8 150 1.61e-29 107
MsaG038279 MtrunA17_Chr3g0111841 79.661 59 12 0 15 73 2 60 8.59e-29 102
MsaG038279 MtrunA17_Chr1g0175601 44.144 111 60 1 9 119 2 110 2.48e-24 94.4
MsaG038279 MtrunA17_Chr4g0071601 35.838 173 97 3 5 167 8 176 7.32e-24 93.2
MsaG038279 MtrunA17_Chr1g0175611 43.363 113 62 1 9 121 2 112 9.01e-24 92.4
MsaG038279 MtrunA17_Chr1g0169761 50.000 90 36 1 9 89 2 91 1.71e-23 92.0
MsaG038279 MtrunA17_Chr4g0074101 38.281 128 64 2 9 121 2 129 2.38e-23 92.0
MsaG038279 MtrunA17_Chr8g0376821 57.971 69 29 0 9 77 2 70 7.37e-23 90.5
MsaG038279 MtrunA17_Chr1g0180591 44.554 101 54 1 9 109 2 100 1.08e-22 89.7
MsaG038279 MtrunA17_Chr8g0357771 55.072 69 31 0 9 77 2 70 2.85e-21 86.3
MsaG038279 MtrunA17_Chr3g0111831 62.295 61 23 0 16 76 11 71 2.91e-21 83.6
MsaG038279 MtrunA17_Chr8g0356071 53.623 69 32 0 9 77 2 70 2.53e-20 83.2
MsaG038279 MtrunA17_Chr4g0052061 39.252 107 63 1 9 115 2 106 7.05e-19 79.3
MsaG038279 MtrunA17_Chr4g0052081 38.679 106 64 1 9 113 2 107 1.38e-17 76.6
MsaG038279 MtrunA17_Chr3g0077501 50.000 70 33 1 7 76 2 69 1.79e-17 77.0
MsaG038279 MtrunA17_Chr8g0351041 31.056 161 95 3 12 168 5 153 2.81e-17 75.5
MsaG038279 MtrunA17_Chr4g0049901 38.793 116 53 2 11 108 30 145 5.09e-17 76.3
MsaG038279 MtrunA17_Chr8g0351051 46.250 80 40 2 7 85 2 79 8.01e-17 75.9
MsaG038279 MtrunA17_Chr4g0057151 50.769 65 32 0 12 76 5 69 8.93e-17 75.1
MsaG038279 MtrunA17_Chr3g0097101 49.333 75 36 1 2 76 12 84 1.41e-16 75.1
MsaG038279 MtrunA17_Chr3g0134451 43.137 102 55 3 9 109 2 101 2.93e-16 75.1
MsaG038279 MtrunA17_Chr8g0345001 32.353 170 88 4 2 159 13 167 9.22e-16 71.6
MsaG038279 MtrunA17_Chr5g0427401 48.485 66 34 0 11 76 4 69 1.14e-15 72.4
MsaG038279 MtrunA17_Chr8g0351031 31.250 144 86 2 12 154 5 136 1.17e-15 72.4
MsaG038279 MtrunA17_Chr8g0380021 47.945 73 36 1 4 76 15 85 1.37e-15 72.4
MsaG038279 MtrunA17_Chr6g0474371 46.479 71 35 2 7 76 2 70 2.43e-15 70.9
MsaG038279 MtrunA17_Chr2g0279821 45.714 70 36 1 7 76 2 69 3.05e-15 71.6
MsaG038279 MtrunA17_Chr2g0284911 48.611 72 35 1 5 76 15 84 3.36e-15 71.6
MsaG038279 MtrunA17_Chr4g0020221 41.667 84 47 1 7 90 2 83 4.04e-15 71.2
MsaG038279 MtrunA17_Chr7g0246431 47.692 65 34 0 12 76 5 69 5.76e-15 70.1
MsaG038279 MtrunA17_Chr4g0061691 45.070 71 36 2 7 76 2 70 6.67e-15 70.5
MsaG038279 MtrunA17_Chr5g0412461 45.455 66 36 0 11 76 4 69 1.08e-14 69.7
MsaG038279 MtrunA17_Chr5g0425191 52.632 57 27 0 9 65 2 58 1.09e-14 67.0
MsaG038279 MtrunA17_Chr5g0411691 32.381 210 104 10 7 183 2 206 1.16e-14 69.7
MsaG038279 MtrunA17_Chr5g0412271 45.455 66 36 0 11 76 4 69 1.25e-14 69.7
MsaG038279 MtrunA17_Chr7g0220121 35.593 118 63 5 7 114 2 116 1.34e-14 70.1
MsaG038279 MtrunA17_Chr1g0204111 47.143 70 35 1 7 76 18 85 1.72e-14 69.7
MsaG038279 MtrunA17_Chr4g0049541 44.286 70 37 1 7 76 2 69 2.08e-14 68.9
MsaG038279 MtrunA17_Chr6g0455511 46.479 71 35 2 7 76 2 70 3.46e-14 68.9
MsaG038279 MtrunA17_Chr7g0220111 46.479 71 35 2 7 76 2 70 4.18e-14 68.6
MsaG038279 MtrunA17_Chr4g0044071 50.877 57 28 0 9 65 2 58 4.33e-14 65.5
MsaG038279 MtrunA17_Chr1g0164791 45.833 72 35 2 7 76 2 71 6.03e-14 67.8
MsaG038279 MtrunA17_Chr5g0404951 47.222 72 34 2 7 76 2 71 6.20e-14 67.8
MsaG038279 MtrunA17_Chr3g0093131 34.266 143 77 4 26 159 36 170 6.48e-14 67.0
MsaG038279 MtrunA17_Chr1g0173161 49.206 63 30 1 7 69 2 62 6.68e-14 64.3
MsaG038279 MtrunA17_Chr8g0366231 43.662 71 37 2 7 76 2 70 7.94e-14 67.8
MsaG038279 MtrunA17_Chr1g0159661 31.538 130 66 4 7 133 2 111 1.35e-13 65.9
MsaG038279 MtrunA17_Chr2g0308251 42.667 75 41 1 7 81 2 74 1.61e-13 63.2
MsaG038279 MtrunA17_Chr7g0246381 44.928 69 31 2 7 70 2 68 2.61e-13 62.4
MsaG038279 MtrunA17_Chr5g0420091 45.070 71 36 2 7 76 2 70 2.95e-13 65.9
MsaG038279 MtrunA17_Chr3g0125241 31.008 129 68 3 7 133 27 136 3.28e-13 65.5
MsaG038279 MtrunA17_Chr3g0142191 43.662 71 38 1 12 80 5 75 4.28e-13 65.5
MsaG038279 MtrunA17_Chr5g0420081 36.170 94 48 3 9 90 2 95 5.36e-13 65.1
MsaG038279 MtrunA17_Chr8g0377561 50.000 58 27 1 7 64 2 57 1.09e-12 61.6
MsaG038279 MtrunA17_Chr3g0122251 41.573 89 46 4 7 91 2 88 1.69e-12 63.9
MsaG038279 MtrunA17_Chr4g0061671 47.458 59 29 1 7 65 2 58 1.95e-12 62.8
MsaG038279 MtrunA17_Chr5g0427921 45.763 59 30 1 7 65 2 58 3.15e-12 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038279 AT5G60440.1 54.491 167 73 2 5 168 3 169 7.61e-54 174
MsaG038279 AT2G24840.1 44.375 160 78 5 9 162 63 217 2.40e-37 130
MsaG038279 AT1G01530.1 43.976 166 86 3 4 166 2 163 2.40e-35 124
MsaG038279 AT1G65360.1 40.828 169 93 3 5 172 3 165 6.24e-35 123
MsaG038279 AT4G36590.1 39.877 163 90 3 5 160 3 164 1.71e-30 112
MsaG038279 AT3G04100.1 32.934 167 98 4 2 159 7 168 2.24e-25 97.8
MsaG038279 AT2G34440.1 40.708 113 66 1 9 121 2 113 6.63e-23 90.5
MsaG038279 AT3G66656.1 38.655 119 69 1 9 123 2 120 4.21e-21 86.3
MsaG038279 AT1G28460.1 30.857 175 117 2 5 177 4 176 2.57e-20 84.0
MsaG038279 AT1G72350.1 52.055 73 33 1 9 81 43 113 4.98e-19 81.6
MsaG038279 AT4G09960.2 40.476 126 61 5 7 126 2 119 1.97e-18 80.1
MsaG038279 AT4G09960.6 43.564 101 48 4 7 101 3 100 2.58e-18 80.1
MsaG038279 AT4G09960.1 43.564 101 48 4 7 101 2 99 2.59e-18 80.1
MsaG038279 AT4G09960.5 43.564 101 48 4 7 101 12 109 3.92e-18 79.7
MsaG038279 AT4G09960.3 39.216 102 50 2 7 108 28 117 5.50e-18 79.7
MsaG038279 AT4G09960.4 40.476 126 61 5 7 126 97 214 9.59e-18 79.7
MsaG038279 AT2G45660.2 50.000 66 33 0 12 77 5 70 1.33e-17 76.3
MsaG038279 AT4G18960.1 39.423 104 51 2 5 108 16 107 2.92e-17 77.4
MsaG038279 AT2G45660.1 50.000 66 33 0 12 77 5 70 3.99e-17 76.3
MsaG038279 AT4G22950.2 50.769 65 32 0 12 76 5 69 4.15e-17 75.5
MsaG038279 AT2G45650.1 50.000 70 33 1 7 76 2 69 4.99e-17 77.0
MsaG038279 AT1G17310.1 33.155 187 81 5 8 189 47 194 5.68e-17 76.3
MsaG038279 AT1G17310.2 33.155 187 81 5 8 189 58 205 6.28e-17 76.3
MsaG038279 AT1G29962.1 38.614 101 59 1 5 102 4 104 1.05e-16 74.7
MsaG038279 AT5G51870.2 52.308 65 31 0 12 76 5 69 1.66e-16 73.9
MsaG038279 AT5G51870.1 52.308 65 31 0 12 76 5 69 2.02e-16 74.3
MsaG038279 AT4G22950.3 50.769 65 32 0 12 76 5 69 2.10e-16 74.7
MsaG038279 AT4G22950.1 50.769 65 32 0 12 76 5 69 2.10e-16 74.7
MsaG038279 AT2G42830.1 49.333 75 36 1 2 76 12 84 2.51e-16 74.7
MsaG038279 AT1G28450.1 30.460 174 111 4 5 168 4 177 2.53e-16 73.6
MsaG038279 AT2G42830.2 49.333 75 36 1 2 76 12 84 2.72e-16 74.7
MsaG038279 AT5G51870.4 52.308 65 31 0 12 76 5 69 3.24e-16 73.9
MsaG038279 AT5G51870.3 50.000 74 35 1 3 76 8 79 4.01e-16 73.9
MsaG038279 AT3G58780.1 49.333 75 36 1 2 76 12 84 4.06e-16 74.3
MsaG038279 AT5G51870.5 52.308 65 31 0 12 76 28 92 4.18e-16 73.2
MsaG038279 AT3G58780.5 49.333 75 36 1 2 76 18 90 4.63e-16 74.3
MsaG038279 AT3G58780.4 49.333 75 36 1 2 76 12 84 6.68e-16 74.3
MsaG038279 AT3G57230.2 44.286 70 37 1 7 76 2 69 7.87e-16 71.2
MsaG038279 AT1G22130.1 38.710 93 56 1 9 100 2 94 1.57e-15 73.9
MsaG038279 AT4G24540.1 32.192 146 80 5 11 155 4 131 1.65e-15 72.4
MsaG038279 AT1G77980.1 48.571 70 35 1 9 77 2 71 1.77e-15 73.6
MsaG038279 AT5G13790.1 50.000 70 33 1 7 76 2 69 2.00e-15 72.8
MsaG038279 AT5G13790.2 50.000 70 33 1 7 76 2 69 2.18e-15 72.8
MsaG038279 AT2G22540.3 48.485 66 34 0 11 76 4 69 2.29e-15 72.0
MsaG038279 AT2G22540.1 48.485 66 34 0 11 76 4 69 2.29e-15 72.0
MsaG038279 AT5G62165.17 46.154 65 35 0 12 76 5 69 2.48e-15 70.5
MsaG038279 AT5G62165.12 46.154 65 35 0 12 76 5 69 2.48e-15 70.5
MsaG038279 AT5G62165.11 46.154 65 35 0 12 76 5 69 2.48e-15 70.5
MsaG038279 AT5G62165.14 46.154 65 35 0 12 76 5 69 3.17e-15 68.9
MsaG038279 AT1G77950.3 44.737 76 40 2 9 83 2 76 3.47e-15 72.0
MsaG038279 AT1G77950.2 44.737 76 40 2 9 83 2 76 3.47e-15 72.0
MsaG038279 AT1G77950.1 44.737 76 40 2 9 83 2 76 3.47e-15 72.0
MsaG038279 AT1G77950.4 44.737 76 40 2 9 83 2 76 3.47e-15 72.0
MsaG038279 AT3G61120.1 42.222 90 49 2 7 95 2 89 3.56e-15 71.6
MsaG038279 AT5G62165.6 46.154 65 35 0 12 76 5 69 3.96e-15 69.7
MsaG038279 AT5G62165.9 46.154 65 35 0 12 76 5 69 3.96e-15 69.7
MsaG038279 AT5G62165.7 46.154 65 35 0 12 76 5 69 3.96e-15 69.7
MsaG038279 AT5G62165.8 46.154 65 35 0 12 76 5 69 3.96e-15 69.7
MsaG038279 AT5G62165.13 46.154 65 35 0 12 76 5 69 3.96e-15 69.7
MsaG038279 AT3G57230.1 44.286 70 37 1 7 76 2 69 5.03e-15 71.2
MsaG038279 AT3G57230.4 44.286 70 37 1 7 76 2 69 5.03e-15 71.2
MsaG038279 AT4G37940.1 45.714 70 36 1 7 76 2 69 5.26e-15 70.9
MsaG038279 AT5G51860.2 49.231 65 33 0 12 76 5 69 5.77e-15 70.5
MsaG038279 AT4G37940.4 45.714 70 36 1 7 76 2 69 5.84e-15 70.5
MsaG038279 AT3G57390.3 47.143 70 35 1 7 76 2 69 6.63e-15 70.9
MsaG038279 AT4G37940.3 45.714 70 36 1 7 76 2 69 7.06e-15 69.7
MsaG038279 AT5G10140.2 47.826 69 35 1 9 76 2 70 7.50e-15 69.3
MsaG038279 AT5G51860.1 49.231 65 33 0 12 76 5 69 8.06e-15 70.1
MsaG038279 AT3G57390.1 47.143 70 35 1 7 76 2 69 1.23e-14 70.5
MsaG038279 AT5G10140.3 47.826 69 35 1 9 76 2 70 1.25e-14 69.3
MsaG038279 AT5G10140.4 47.826 69 35 1 9 76 2 70 1.34e-14 68.9
MsaG038279 AT5G62165.3 46.154 65 35 0 12 76 5 69 1.38e-14 69.7
MsaG038279 AT5G62165.1 46.154 65 35 0 12 76 5 69 1.38e-14 69.7
MsaG038279 AT5G62165.2 46.154 65 35 0 12 76 5 69 1.38e-14 69.7
MsaG038279 AT3G54340.1 46.269 67 34 1 12 76 5 71 1.41e-14 70.1
MsaG038279 AT5G62165.10 46.154 65 35 0 12 76 5 69 1.54e-14 69.3
MsaG038279 AT5G62165.4 46.154 65 35 0 12 76 5 69 1.54e-14 69.3
MsaG038279 AT1G47760.1 35.135 111 58 2 9 119 2 98 1.90e-14 68.6
MsaG038279 AT5G10140.1 47.826 69 35 1 9 76 2 70 1.91e-14 68.9
MsaG038279 AT3G30260.1 43.662 71 37 2 7 76 2 70 4.31e-14 68.9
MsaG038279 AT1G69120.2 45.070 71 36 2 7 76 2 70 4.50e-14 68.6
MsaG038279 AT5G60910.1 45.070 71 36 2 7 76 2 70 4.99e-14 68.6
MsaG038279 AT4G11880.2 46.970 66 34 1 12 76 5 70 5.43e-14 67.4
MsaG038279 AT4G11880.3 46.970 66 34 1 12 76 5 70 5.43e-14 67.4
MsaG038279 AT1G26310.1 45.070 71 36 2 7 76 2 70 6.64e-14 68.6
MsaG038279 AT2G22630.1 44.286 70 37 1 7 76 2 69 7.78e-14 67.8
MsaG038279 AT2G22630.2 44.286 70 37 1 7 76 2 69 7.78e-14 67.8
MsaG038279 AT1G69120.1 45.070 71 36 2 7 76 2 70 1.03e-13 67.8
MsaG038279 AT4G11880.4 46.970 66 34 1 12 76 5 70 1.14e-13 67.4
MsaG038279 AT4G11880.1 46.970 66 34 1 12 76 5 70 1.14e-13 67.4
MsaG038279 AT5G15800.1 46.479 71 35 2 7 76 2 70 1.62e-13 67.4
MsaG038279 AT2G14210.1 43.662 71 37 2 7 76 2 70 1.76e-13 67.0
MsaG038279 AT5G23260.2 49.315 73 33 2 7 77 2 72 1.98e-13 67.0
MsaG038279 AT5G23260.1 49.315 73 33 2 7 77 18 88 2.00e-13 67.4
MsaG038279 AT3G58780.2 50.769 65 30 1 2 66 12 74 2.08e-13 67.0
MsaG038279 AT5G23260.4 49.315 73 33 2 7 77 18 88 2.14e-13 67.0
MsaG038279 AT5G23260.3 49.315 73 33 2 7 77 2 72 2.22e-13 66.6
MsaG038279 AT2G14210.2 43.662 71 37 2 7 76 2 70 2.39e-13 66.6
MsaG038279 AT5G15800.2 46.479 71 35 2 7 76 2 70 2.59e-13 67.0
MsaG038279 AT3G58780.3 50.769 65 30 1 2 66 12 74 2.76e-13 67.0
MsaG038279 AT5G20240.2 34.109 129 64 4 7 133 2 111 3.10e-13 64.7
MsaG038279 AT5G65050.2 44.928 69 37 1 9 76 2 70 3.43e-13 65.1
MsaG038279 AT2G22540.2 46.970 66 30 1 11 76 4 64 4.12e-13 65.9
MsaG038279 AT5G65050.5 44.928 69 37 1 9 76 2 70 5.18e-13 64.7
MsaG038279 AT5G65050.1 44.928 69 37 1 9 76 2 70 5.86e-13 64.7
MsaG038279 AT5G65050.3 44.928 69 37 1 9 76 2 70 6.27e-13 64.7
MsaG038279 AT5G20240.1 34.109 129 64 4 7 133 2 111 6.46e-13 65.1
MsaG038279 AT5G65060.2 44.928 69 37 1 9 76 2 70 8.66e-13 64.3
MsaG038279 AT3G02310.2 45.070 71 36 2 7 76 2 70 9.17e-13 64.3
MsaG038279 AT5G65060.3 44.928 69 37 1 9 76 2 70 9.37e-13 64.3
MsaG038279 AT2G03710.3 44.444 72 36 3 7 76 2 71 1.08e-12 63.9
MsaG038279 AT5G65060.1 44.928 69 37 1 9 76 2 70 1.20e-12 63.9
MsaG038279 AT1G24260.3 38.542 96 53 4 7 98 2 95 2.56e-12 63.9
MsaG038279 AT1G24260.2 38.542 96 53 4 7 98 2 95 2.67e-12 63.9
MsaG038279 AT3G02310.1 45.070 71 36 2 7 76 2 70 2.95e-12 63.9
MsaG038279 AT2G03710.1 44.444 72 36 3 7 76 2 71 4.08e-12 63.5
MsaG038279 AT2G03710.2 44.444 72 36 3 7 76 2 71 4.17e-12 63.5
MsaG038279 AT1G24260.1 50.000 58 27 1 7 64 2 57 4.35e-12 63.2
MsaG038279 AT1G71692.1 41.791 67 38 1 12 77 5 71 7.42e-12 62.0
MsaG038279 AT5G65070.4 39.130 69 41 1 9 76 2 70 8.35e-12 60.8
MsaG038279 AT5G49420.1 36.170 94 53 2 5 91 3 96 1.19e-11 62.8
MsaG038279 AT5G65070.1 39.130 69 41 1 9 76 2 70 2.05e-11 60.8
MsaG038279 AT5G65070.2 39.130 69 41 1 9 76 2 70 3.89e-11 60.5
MsaG038279 AT5G65070.5 39.130 69 41 1 9 76 2 70 4.33e-11 60.1

Find 35 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGAGTTATCACTTAAT+TGG 0.140497 7:-74521964 None:intergenic
CCTTCAACGCCTTGCATAAA+AGG 0.199803 7:-74520970 None:intergenic
TGAATTATTCAAGAAGATTT+TGG 0.235888 7:+74521042 MsaT038279.1:CDS
TGTTGATAGGAGTGCAATTC+AGG 0.259070 7:+74521093 MsaT038279.1:CDS
AAATAATTACCAACAGAAAA+TGG 0.265409 7:-74521136 None:intergenic
AGGCGTTGAAGGCTCAATTT+TGG 0.314192 7:+74520981 MsaT038279.1:CDS
AATGAGCTTTGCACTCTTTG+TGG 0.373997 7:+74520716 MsaT038279.1:CDS
GCCCTGTTCATTCCATCAAT+TGG 0.378897 7:-74521013 None:intergenic
CACTTGGAGGTTGCTCTCAT+TGG 0.382708 7:-74520654 None:intergenic
TTGTTGCTCAACATGTTGAT+AGG 0.407276 7:+74521080 MsaT038279.1:CDS
GTCCAATTGATGGAATGAAC+AGG 0.413364 7:+74521011 MsaT038279.1:CDS
TGGTGGGCATGTCCAATTGA+TGG 0.439101 7:+74521001 MsaT038279.1:CDS
TCTATGACCGTATCAACATT+TGG 0.448129 7:-74520797 None:intergenic
TCATAGATCGCTATCTCTGT+GGG 0.470822 7:+74520813 MsaT038279.1:CDS
ACCATGTCGAGCGGAAAGAA+AGG 0.479640 7:+74520596 None:intergenic
ACCTTTCTTTCCGCTCGACA+TGG 0.490818 7:-74520597 None:intergenic
AGCATTGAGCTCACGCACTT+TGG 0.503646 7:-74520888 None:intergenic
CGGTCATCCAAATGTTGATA+CGG 0.514501 7:+74520790 MsaT038279.1:CDS
TGTATTCTCACCTAGTGAAA+AGG 0.515766 7:+74520757 MsaT038279.1:CDS
GTTGATAGGAGTGCAATTCA+GGG 0.537321 7:+74521094 MsaT038279.1:CDS
GCTTTGAGAAAGTCACTTGG+AGG 0.544594 7:-74520667 None:intergenic
GTCATAGATCGCTATCTCTG+TGG 0.549804 7:+74520812 MsaT038279.1:CDS
CTTTCTCAAAGCGTCGTAGT+GGG 0.584950 7:+74520678 MsaT038279.1:CDS
AATCAACAACACACTGGACG+AGG 0.587728 7:+74520922 MsaT038279.1:CDS
ATGAGCCTCAATGAATTCCA+TGG 0.597814 7:-74520858 None:intergenic
ACTTTCTCAAAGCGTCGTAG+TGG 0.602122 7:+74520677 MsaT038279.1:CDS
GACGCTTTGAGAAAGTCACT+TGG 0.608413 7:-74520670 None:intergenic
TCGAGCGGAAAGAAAGGTCG+TGG 0.610361 7:+74520602 MsaT038279.1:CDS
TCCAATTGATGGAATGAACA+GGG 0.637161 7:+74521012 MsaT038279.1:CDS
GTTTCAAATCAACAACACAC+TGG 0.650841 7:+74520916 MsaT038279.1:CDS
CAGCACCATGGAATTCATTG+AGG 0.664382 7:+74520853 MsaT038279.1:CDS
ACCGCAAAACAACAGCACCA+TGG 0.667033 7:+74520841 MsaT038279.1:CDS
TGTACTTCAACCATGTCGAG+CGG 0.669543 7:+74520587 None:intergenic
TTGCATGGACTGCAGTCATG+TGG 0.700353 7:+74521929 MsaT038279.1:intron
CATAGATCGCTATCTCTGTG+GGG 0.721259 7:+74520814 MsaT038279.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 74520599 74521975 74520599 ID=MsaG038279
Chr7 mRNA 74520599 74521975 74520599 ID=MsaT038279.1;Parent=MsaG038279
Chr7 exon 74520599 74521148 74520599 ID=MsaT038279.1.exon1;Parent=MsaT038279.1
Chr7 CDS 74520599 74521148 74520599 ID=cds.MsaT038279.1;Parent=MsaT038279.1
Chr7 exon 74521944 74521975 74521944 ID=MsaT038279.1.exon2;Parent=MsaT038279.1
Chr7 CDS 74521944 74521975 74521944 ID=cds.MsaT038279.1;Parent=MsaT038279.1
Gene Sequence

>MsaT038279.1

ATGTCGAGCGGAAAGAAAGGTCGTGGTAGCCAAAAGATCGAGATGAAAAAGATGACCAATGAGAGCAACCTCCAAGTGACTTTCTCAAAGCGTCGTAGTGGGCTCTTCAAGAAAGTCAATGAGCTTTGCACTCTTTGTGGTGTAGATGTTGCTCTCGTTGTATTCTCACCTAGTGAAAAGGTGTTTTCTTTCGGTCATCCAAATGTTGATACGGTCATAGATCGCTATCTCTGTGGGGTCCCACCGCAAAACAACAGCACCATGGAATTCATTGAGGCTCATCGTAGCGCCAAAGTGCGTGAGCTCAATGCTGAGTTGTTTCAAATCAACAACACACTGGACGAGGAGAAAAAGCGTGGTGATGAGTTGAGCCTTTTATGCAAGGCGTTGAAGGCTCAATTTTGGTGGGCATGTCCAATTGATGGAATGAACAGGGCTCAGCTTGAATTATTCAAGAAGATTTTGGTGGAGCTTAAGAAACTTGTTGCTCAACATGTTGATAGGAGTGCAATTCAGGGTGCATTTGCTCACACTTTTCCATTTTCTGTTGTCATGTGGCAAGCAACTGATCCAATTAAGTGA
Protein sequence

>MsaT038279.1

MSSGKKGRGSQKIEMKKMTNESNLQVTFSKRRSGLFKKVNELCTLCGVDVALVVFSPSEKVFSFGHPNVDTVIDRYLCGVPPQNNSTMEFIEAHRSAKVRELNAELFQINNTLDEEKKRGDELSLLCKALKAQFWWACPIDGMNRAQLELFKKILVELKKLVAQHVDRSAIQGAFAHTFPFSVVMWQATDPIK*