Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038369 | XP_003623743.1 | 96.923 | 195 | 5 | 1 | 1 | 195 | 1 | 194 | 8.52e-136 | 388 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038369 | sp|O22132|LBD19_ARATH | 71.429 | 119 | 31 | 3 | 15 | 132 | 19 | 135 | 4.30e-52 | 168 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038369 | tr|G7L0B7|G7L0B7_MEDTR | 96.923 | 195 | 5 | 1 | 1 | 195 | 1 | 194 | 4.07e-136 | 388 |
Gene ID | Type | Classification |
---|---|---|
MsaG038369 | TF | LOB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000083 | MsaG038369 | 0.818134 | 4.002692e-52 | 8.383616e-50 |
MsaG000446 | MsaG038369 | 0.814322 | 2.822006e-51 | 5.362851e-49 |
MsaG002024 | MsaG038369 | 0.815338 | 1.684631e-51 | 3.284538e-49 |
MsaG002929 | MsaG038369 | 0.810705 | 1.727775e-50 | 3.001702e-48 |
MsaG003332 | MsaG038369 | 0.812653 | 6.545352e-51 | 1.192930e-48 |
MsaG006199 | MsaG038369 | 0.808318 | 5.592720e-50 | 9.171168e-48 |
MsaG006473 | MsaG038369 | 0.803653 | 5.299293e-49 | 7.786962e-47 |
MsaG006679 | MsaG038369 | 0.801005 | 1.849193e-48 | 2.557524e-46 |
MsaG006806 | MsaG038369 | 0.812392 | 7.460000e-51 | 1.350881e-48 |
MsaG006841 | MsaG038369 | 0.810424 | 1.985487e-50 | 3.426028e-48 |
MsaG007700 | MsaG038369 | 0.805792 | 1.903779e-49 | 2.940005e-47 |
MsaG008005 | MsaG038369 | 0.808523 | 5.060853e-50 | 8.340107e-48 |
MsaG008138 | MsaG038369 | 0.803862 | 4.797384e-49 | 7.083675e-47 |
MsaG010331 | MsaG038369 | 0.802378 | 9.694076e-49 | 1.383317e-46 |
MsaG011335 | MsaG038369 | 0.809619 | 2.955012e-50 | 5.000154e-48 |
MsaG013189 | MsaG038369 | 0.800947 | 1.899331e-48 | 2.623503e-46 |
MsaG013327 | MsaG038369 | 0.816258 | 1.052761e-51 | 2.101071e-49 |
MsaG014126 | MsaG038369 | 0.800546 | 2.291607e-48 | 3.136850e-46 |
MsaG014319 | MsaG038369 | 0.802468 | 9.291790e-49 | 1.328610e-46 |
MsaG014534 | MsaG038369 | 0.810384 | 2.025891e-50 | 3.492258e-48 |
MsaG015447 | MsaG038369 | 0.804050 | 4.386492e-49 | 6.505597e-47 |
MsaG015757 | MsaG038369 | 0.806723 | 1.214661e-49 | 1.917542e-47 |
MsaG015904 | MsaG038369 | 0.805514 | 2.176586e-49 | 3.339391e-47 |
MsaG016002 | MsaG038369 | 0.818468 | 3.366343e-52 | 7.111698e-50 |
MsaG016250 | MsaG038369 | 0.806214 | 1.553903e-49 | 2.423823e-47 |
MsaG016429 | MsaG038369 | 0.810038 | 2.403839e-50 | 4.108796e-48 |
MsaG017459 | MsaG038369 | 0.810064 | 2.373221e-50 | 4.059044e-48 |
MsaG018355 | MsaG038369 | 0.817157 | 6.633490e-52 | 1.354860e-49 |
MsaG019540 | MsaG038369 | 0.801019 | 1.836864e-48 | 2.541305e-46 |
MsaG019734 | MsaG038369 | 0.800335 | 2.529235e-48 | 3.445553e-46 |
MsaG020004 | MsaG038369 | 0.801170 | 1.711220e-48 | 2.375575e-46 |
MsaG021403 | MsaG038369 | 0.807033 | 1.045636e-49 | 1.662740e-47 |
MsaG021484 | MsaG038369 | 0.807120 | 1.002176e-49 | 1.596942e-47 |
MsaG021783 | MsaG038369 | 0.808857 | 4.295730e-50 | 7.136620e-48 |
MsaG021836 | MsaG038369 | 0.820984 | 9.018116e-53 | 2.035836e-50 |
MsaG022048 | MsaG038369 | 0.802041 | 1.136605e-48 | 1.609373e-46 |
MsaG022454 | MsaG038369 | 0.800137 | 2.773190e-48 | 3.761089e-46 |
MsaG023230 | MsaG038369 | 0.800351 | 2.510484e-48 | 3.421336e-46 |
MsaG023639 | MsaG038369 | 0.802566 | 8.870564e-49 | 1.271264e-46 |
MsaG024313 | MsaG038369 | 0.806829 | 1.154092e-49 | 1.826381e-47 |
MsaG026252 | MsaG038369 | 0.844772 | 1.151467e-58 | 5.237090e-56 |
MsaG027573 | MsaG038369 | 0.803884 | 4.746401e-49 | 7.011962e-47 |
MsaG028308 | MsaG038369 | 0.815730 | 1.379201e-51 | 2.715867e-49 |
MsaG028370 | MsaG038369 | 0.801385 | 1.547100e-48 | 2.158241e-46 |
MsaG028328 | MsaG038369 | 0.803630 | 5.357357e-49 | 7.867996e-47 |
MsaG029851 | MsaG038369 | 0.813219 | 4.925025e-51 | 9.104180e-49 |
MsaG030723 | MsaG038369 | 0.805312 | 2.398095e-49 | 3.662095e-47 |
MsaG031693 | MsaG038369 | 0.815346 | 1.677945e-51 | 3.272154e-49 |
MsaG032196 | MsaG038369 | 0.810028 | 2.415217e-50 | 4.127237e-48 |
MsaG034231 | MsaG038369 | 0.806544 | 1.325051e-49 | 2.082988e-47 |
MsaG035462 | MsaG038369 | 0.814984 | 2.016679e-51 | 3.896928e-49 |
MsaG037276 | MsaG038369 | 0.803158 | 6.704220e-49 | 9.739259e-47 |
MsaG037650 | MsaG038369 | 0.816281 | 1.040652e-51 | 2.078132e-49 |
MsaG038369 | MsaG039098 | 0.822455 | 4.135667e-53 | 9.708785e-51 |
MsaG038369 | MsaG040019 | 0.809525 | 3.094255e-50 | 5.224064e-48 |
MsaG038369 | MsaG040037 | 0.825686 | 7.273237e-54 | 1.864582e-51 |
MsaG038369 | MsaG040265 | 0.816209 | 1.079747e-51 | 2.152253e-49 |
MsaG038369 | MsaG040354 | 0.803561 | 5.536292e-49 | 8.117980e-47 |
MsaG038369 | MsaG040673 | 0.825024 | 1.041823e-53 | 2.622484e-51 |
MsaG038369 | MsaG041066 | 0.808071 | 6.310792e-50 | 1.028747e-47 |
MsaG038369 | MsaG041801 | 0.820443 | 1.199274e-52 | 2.668846e-50 |
MsaG038369 | MsaG044886 | 0.809229 | 3.580071e-50 | 6.000671e-48 |
MsaG038369 | MsaG045051 | 0.824683 | 1.252554e-53 | 3.123521e-51 |
MsaG038369 | MsaG046002 | 0.803442 | 5.858162e-49 | 8.566336e-47 |
MsaG038369 | MsaG046281 | 0.802435 | 9.435320e-49 | 1.348134e-46 |
MsaG038369 | MsaG046700 | 0.803643 | 5.324385e-49 | 7.821920e-47 |
MsaG038369 | MsaG003231 | 0.806058 | 1.675332e-49 | 2.603471e-47 |
MsaG038369 | MsaG000658 | 0.829497 | 8.940321e-55 | 2.550379e-52 |
MsaG038369 | MsaG013588 | 0.806654 | 1.256146e-49 | 1.979779e-47 |
MsaG038369 | MsaG013067 | 0.807386 | 8.807110e-50 | 1.412281e-47 |
MsaG038369 | MsaG018328 | 0.806511 | 1.346209e-49 | 2.114611e-47 |
MsaG038369 | MsaG018508 | 0.819958 | 1.546765e-52 | 3.398230e-50 |
MsaG038369 | MsaG018951 | 0.810362 | 2.047661e-50 | 3.527939e-48 |
MsaG038369 | MsaG020214 | 0.814577 | 2.480107e-51 | 4.743218e-49 |
MsaG038369 | MsaG024064 | 0.834989 | 3.968964e-56 | 1.329017e-53 |
MsaG038369 | MsaG027624 | 0.817301 | 6.157562e-52 | 1.262349e-49 |
MsaG038369 | MsaG031743 | 0.800095 | 2.827991e-48 | 3.831804e-46 |
MsaG038369 | MsaG034563 | 0.804233 | 4.020713e-49 | 5.988282e-47 |
MsaG038369 | MsaG033379 | 0.810239 | 2.176397e-50 | 3.738376e-48 |
MsaG038369 | MsaG036287 | 0.809413 | 3.270095e-50 | 5.505839e-48 |
MsaG038369 | MsaG047127 | 0.810756 | 1.684623e-50 | 2.930413e-48 |
MsaG038369 | MsaG047199 | 0.820871 | 9.571680e-53 | 2.154241e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038369 | MtrunA17_Chr7g0245861 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 4.23e-71 | 212 |
MsaG038369 | MtrunA17_Chr8g0351721 | 63.077 | 195 | 60 | 6 | 4 | 194 | 10 | 196 | 1.38e-67 | 206 |
MsaG038369 | MtrunA17_Chr8g0351701 | 72.642 | 106 | 27 | 2 | 11 | 116 | 22 | 125 | 3.43e-52 | 167 |
MsaG038369 | MtrunA17_Chr7g0245871 | 67.619 | 105 | 32 | 2 | 12 | 116 | 27 | 129 | 3.85e-46 | 152 |
MsaG038369 | MtrunA17_Chr7g0261031 | 65.546 | 119 | 36 | 4 | 10 | 125 | 6 | 122 | 1.22e-45 | 150 |
MsaG038369 | MtrunA17_Chr1g0184271 | 54.225 | 142 | 60 | 4 | 12 | 151 | 12 | 150 | 5.18e-45 | 149 |
MsaG038369 | MtrunA17_Chr7g0260971 | 65.487 | 113 | 37 | 2 | 4 | 116 | 6 | 116 | 2.00e-44 | 147 |
MsaG038369 | MtrunA17_Chr1g0184281 | 58.065 | 124 | 50 | 2 | 10 | 133 | 13 | 134 | 6.78e-42 | 140 |
MsaG038369 | MtrunA17_Chr6g0460951 | 62.385 | 109 | 37 | 3 | 12 | 120 | 40 | 144 | 7.14e-40 | 135 |
MsaG038369 | MtrunA17_Chr5g0435641 | 61.616 | 99 | 36 | 2 | 10 | 108 | 5 | 101 | 2.31e-39 | 133 |
MsaG038369 | MtrunA17_Chr5g0437571 | 46.386 | 166 | 76 | 5 | 9 | 164 | 3 | 165 | 2.87e-37 | 127 |
MsaG038369 | MtrunA17_Chr3g0114061 | 42.857 | 161 | 78 | 3 | 6 | 155 | 2 | 159 | 2.98e-35 | 121 |
MsaG038369 | MtrunA17_Chr2g0311601 | 53.509 | 114 | 44 | 3 | 8 | 115 | 3 | 113 | 8.79e-34 | 117 |
MsaG038369 | MtrunA17_Chr7g0227511 | 53.043 | 115 | 51 | 2 | 12 | 126 | 11 | 122 | 6.46e-33 | 116 |
MsaG038369 | MtrunA17_Chr3g0106101 | 51.402 | 107 | 49 | 2 | 9 | 115 | 4 | 107 | 3.25e-32 | 114 |
MsaG038369 | MtrunA17_Chr4g0058651 | 58.586 | 99 | 38 | 2 | 10 | 108 | 9 | 104 | 1.03e-31 | 113 |
MsaG038369 | MtrunA17_Chr3g0117121 | 55.660 | 106 | 44 | 2 | 10 | 115 | 8 | 110 | 2.07e-31 | 112 |
MsaG038369 | MtrunA17_Chr6g0449641 | 53.704 | 108 | 47 | 2 | 12 | 119 | 9 | 113 | 2.77e-31 | 111 |
MsaG038369 | MtrunA17_Chr4g0043421 | 54.902 | 102 | 43 | 2 | 12 | 113 | 15 | 113 | 3.69e-31 | 111 |
MsaG038369 | MtrunA17_Chr4g0030001 | 42.958 | 142 | 67 | 3 | 11 | 141 | 23 | 161 | 5.76e-31 | 111 |
MsaG038369 | MtrunA17_Chr5g0437401 | 51.923 | 104 | 47 | 2 | 13 | 116 | 12 | 112 | 1.88e-30 | 110 |
MsaG038369 | MtrunA17_Chr5g0438091 | 43.038 | 158 | 78 | 5 | 12 | 162 | 39 | 191 | 2.11e-29 | 107 |
MsaG038369 | MtrunA17_Chr3g0097221 | 52.778 | 108 | 48 | 2 | 12 | 119 | 7 | 111 | 1.34e-28 | 108 |
MsaG038369 | MtrunA17_Chr6g0449651 | 50.943 | 106 | 49 | 2 | 10 | 115 | 65 | 167 | 6.42e-28 | 103 |
MsaG038369 | MtrunA17_Chr3g0115431 | 50.926 | 108 | 50 | 2 | 9 | 116 | 6 | 110 | 1.49e-27 | 103 |
MsaG038369 | MtrunA17_Chr3g0113891 | 50.000 | 100 | 47 | 2 | 13 | 112 | 15 | 111 | 1.59e-27 | 102 |
MsaG038369 | MtrunA17_Chr5g0402611 | 40.698 | 172 | 66 | 5 | 12 | 183 | 8 | 143 | 2.32e-27 | 105 |
MsaG038369 | MtrunA17_Chr1g0200201 | 50.485 | 103 | 48 | 2 | 13 | 115 | 73 | 172 | 8.63e-27 | 102 |
MsaG038369 | MtrunA17_Chr3g0129071 | 50.962 | 104 | 48 | 2 | 12 | 115 | 47 | 147 | 1.01e-26 | 102 |
MsaG038369 | MtrunA17_Chr6g0460941 | 55.556 | 90 | 38 | 2 | 12 | 101 | 7 | 94 | 1.58e-26 | 97.4 |
MsaG038369 | MtrunA17_Chr5g0432451 | 53.846 | 104 | 45 | 2 | 12 | 115 | 43 | 143 | 5.06e-23 | 92.0 |
MsaG038369 | MtrunA17_Chr5g0444351 | 42.453 | 106 | 58 | 2 | 11 | 116 | 4 | 106 | 1.73e-22 | 88.6 |
MsaG038369 | MtrunA17_Chr8g0353981 | 49.550 | 111 | 53 | 2 | 12 | 122 | 7 | 114 | 8.07e-22 | 89.0 |
MsaG038369 | MtrunA17_Chr7g0225111 | 38.462 | 104 | 61 | 2 | 13 | 116 | 6 | 106 | 2.51e-20 | 82.0 |
MsaG038369 | MtrunA17_Chr8g0374601 | 39.048 | 105 | 61 | 2 | 12 | 116 | 26 | 127 | 2.05e-17 | 78.2 |
MsaG038369 | MtrunA17_Chr8g0374591 | 40.952 | 105 | 59 | 2 | 12 | 116 | 8 | 109 | 6.40e-17 | 73.6 |
MsaG038369 | MtrunA17_Chr8g0342351 | 37.736 | 106 | 63 | 2 | 13 | 118 | 13 | 115 | 1.02e-15 | 73.2 |
MsaG038369 | MtrunA17_Chr2g0330201 | 37.143 | 105 | 63 | 2 | 13 | 117 | 20 | 121 | 1.13e-15 | 73.6 |
MsaG038369 | MtrunA17_Chr6g0452691 | 39.623 | 106 | 60 | 3 | 13 | 117 | 10 | 112 | 2.55e-15 | 70.9 |
MsaG038369 | MtrunA17_Chr8g0374581 | 36.538 | 104 | 64 | 1 | 12 | 115 | 8 | 109 | 8.09e-15 | 70.1 |
MsaG038369 | MtrunA17_Chr4g0040831 | 40.625 | 96 | 54 | 2 | 13 | 108 | 16 | 108 | 9.36e-15 | 69.7 |
MsaG038369 | MtrunA17_Chr4g0059901 | 37.143 | 105 | 63 | 2 | 13 | 117 | 11 | 112 | 1.27e-14 | 70.1 |
MsaG038369 | MtrunA17_Chr6g0452671 | 33.929 | 112 | 70 | 3 | 1 | 112 | 1 | 108 | 1.74e-13 | 66.2 |
MsaG038369 | MtrunA17_Chr6g0452661 | 34.906 | 106 | 58 | 5 | 13 | 110 | 10 | 112 | 2.05e-12 | 63.9 |
MsaG038369 | MtrunA17_Chr2g0326051 | 51.786 | 56 | 27 | 0 | 60 | 115 | 5 | 60 | 1.58e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038369 | AT2G45410.1 | 71.429 | 119 | 31 | 3 | 15 | 132 | 19 | 135 | 4.37e-53 | 168 |
MsaG038369 | AT4G00210.1 | 63.971 | 136 | 43 | 3 | 10 | 141 | 9 | 142 | 2.22e-52 | 167 |
MsaG038369 | AT2G45420.1 | 75.238 | 105 | 24 | 2 | 15 | 119 | 40 | 142 | 1.48e-48 | 159 |
MsaG038369 | AT4G00220.1 | 69.524 | 105 | 30 | 2 | 15 | 119 | 20 | 122 | 1.04e-45 | 150 |
MsaG038369 | AT3G03760.1 | 68.468 | 111 | 32 | 3 | 12 | 122 | 51 | 158 | 6.04e-45 | 150 |
MsaG038369 | AT3G58190.1 | 57.851 | 121 | 49 | 2 | 12 | 132 | 11 | 129 | 8.10e-45 | 148 |
MsaG038369 | AT2G42430.1 | 56.934 | 137 | 48 | 4 | 10 | 137 | 13 | 147 | 4.59e-44 | 147 |
MsaG038369 | AT2G42440.1 | 55.200 | 125 | 49 | 3 | 10 | 129 | 5 | 127 | 1.09e-42 | 143 |
MsaG038369 | AT5G06080.1 | 48.026 | 152 | 64 | 4 | 10 | 151 | 5 | 151 | 1.14e-40 | 136 |
MsaG038369 | AT2G31310.1 | 58.879 | 107 | 42 | 2 | 10 | 116 | 5 | 109 | 1.64e-39 | 134 |
MsaG038369 | AT2G30130.1 | 50.407 | 123 | 57 | 3 | 6 | 128 | 2 | 120 | 1.04e-33 | 119 |
MsaG038369 | AT5G63090.4 | 57.143 | 105 | 42 | 2 | 12 | 116 | 11 | 112 | 1.79e-31 | 113 |
MsaG038369 | AT5G63090.3 | 57.143 | 105 | 42 | 2 | 12 | 116 | 11 | 112 | 1.79e-31 | 113 |
MsaG038369 | AT5G63090.2 | 57.143 | 105 | 42 | 2 | 12 | 116 | 11 | 112 | 1.79e-31 | 113 |
MsaG038369 | AT5G63090.1 | 57.143 | 105 | 42 | 2 | 12 | 116 | 11 | 112 | 1.79e-31 | 113 |
MsaG038369 | AT1G16530.1 | 49.153 | 118 | 55 | 2 | 11 | 125 | 13 | 128 | 2.50e-31 | 112 |
MsaG038369 | AT3G27650.1 | 53.846 | 104 | 45 | 2 | 12 | 115 | 39 | 139 | 2.80e-30 | 109 |
MsaG038369 | AT1G07900.1 | 40.741 | 162 | 82 | 5 | 11 | 164 | 32 | 187 | 1.53e-29 | 108 |
MsaG038369 | AT3G11090.1 | 41.290 | 155 | 83 | 5 | 13 | 163 | 12 | 162 | 2.10e-29 | 107 |
MsaG038369 | AT2G28500.1 | 50.962 | 104 | 48 | 2 | 12 | 115 | 55 | 155 | 8.68e-29 | 107 |
MsaG038369 | AT5G66870.1 | 49.635 | 137 | 54 | 5 | 12 | 136 | 7 | 140 | 5.88e-28 | 107 |
MsaG038369 | AT1G31320.1 | 53.333 | 90 | 39 | 2 | 12 | 101 | 13 | 99 | 9.27e-28 | 103 |
MsaG038369 | AT3G26660.1 | 44.762 | 105 | 55 | 2 | 13 | 117 | 6 | 107 | 2.44e-27 | 100 |
MsaG038369 | AT3G26620.1 | 44.762 | 105 | 55 | 2 | 13 | 117 | 6 | 107 | 4.14e-27 | 100 |
MsaG038369 | AT2G23660.2 | 47.115 | 104 | 52 | 2 | 12 | 115 | 5 | 105 | 3.98e-25 | 99.8 |
MsaG038369 | AT2G23660.3 | 47.115 | 104 | 52 | 2 | 12 | 115 | 5 | 105 | 3.98e-25 | 99.8 |
MsaG038369 | AT2G23660.1 | 47.115 | 104 | 52 | 2 | 12 | 115 | 5 | 105 | 3.98e-25 | 99.8 |
MsaG038369 | AT2G30340.1 | 48.077 | 104 | 51 | 2 | 12 | 115 | 52 | 152 | 1.04e-24 | 97.8 |
MsaG038369 | AT2G30340.2 | 48.077 | 104 | 51 | 2 | 12 | 115 | 53 | 153 | 1.15e-24 | 97.8 |
MsaG038369 | AT3G50510.1 | 43.636 | 110 | 59 | 2 | 7 | 116 | 7 | 113 | 4.69e-23 | 91.7 |
MsaG038369 | AT3G50510.2 | 43.636 | 110 | 59 | 2 | 7 | 116 | 7 | 113 | 4.69e-23 | 91.7 |
MsaG038369 | AT2G40470.2 | 52.885 | 104 | 46 | 2 | 12 | 115 | 20 | 120 | 4.88e-22 | 89.0 |
MsaG038369 | AT2G40470.1 | 52.885 | 104 | 46 | 2 | 12 | 115 | 45 | 145 | 5.25e-22 | 89.7 |
MsaG038369 | AT1G65620.1 | 52.381 | 105 | 47 | 2 | 12 | 116 | 9 | 110 | 6.23e-22 | 89.0 |
MsaG038369 | AT1G65620.4 | 52.381 | 105 | 47 | 2 | 12 | 116 | 9 | 110 | 6.23e-22 | 89.0 |
MsaG038369 | AT1G65620.3 | 52.381 | 105 | 47 | 2 | 12 | 116 | 9 | 110 | 6.23e-22 | 89.0 |
MsaG038369 | AT1G65620.5 | 52.381 | 105 | 47 | 2 | 12 | 116 | 9 | 110 | 6.23e-22 | 89.0 |
MsaG038369 | AT1G65620.2 | 52.381 | 105 | 47 | 2 | 12 | 116 | 9 | 110 | 6.23e-22 | 89.0 |
MsaG038369 | AT1G72980.1 | 35.772 | 123 | 74 | 3 | 9 | 129 | 8 | 127 | 2.55e-15 | 71.6 |
MsaG038369 | AT5G35900.1 | 33.043 | 115 | 74 | 2 | 13 | 127 | 6 | 117 | 4.23e-15 | 70.9 |
MsaG038369 | AT3G13850.1 | 33.898 | 118 | 75 | 2 | 13 | 130 | 37 | 151 | 7.07e-15 | 71.2 |
MsaG038369 | AT3G47870.1 | 29.907 | 107 | 72 | 2 | 11 | 117 | 35 | 138 | 2.39e-12 | 64.7 |
MsaG038369 | AT1G06280.1 | 41.558 | 77 | 42 | 2 | 13 | 89 | 25 | 98 | 2.64e-12 | 63.5 |
Find 37 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAGAGAGAGAGATGGATTT+GGG | 0.204949 | 7:-75694500 | None:intergenic |
AGGGCTACTGACCCTGTTTA+TGG | 0.239262 | 7:-75694245 | MsaT038369.1:CDS |
TTTAGAGAGAGAGATGGATT+TGG | 0.290229 | 7:-75694501 | None:intergenic |
AAGGCAAAGCTTGGAATTCC+TGG | 0.322902 | 7:+75691685 | None:intergenic |
GGGTGTGGGGATGACGGTGG+TGG | 0.353668 | 7:-75694479 | MsaT038369.1:CDS |
AGAGAGATGGATTTGGGGTG+TGG | 0.373011 | 7:-75694494 | None:intergenic |
GTCATGAAGTTGTTGATTAT+AGG | 0.378812 | 7:+75691707 | None:intergenic |
TGACCTGATGACTCAAAATA+TGG | 0.381006 | 7:+75694395 | None:intergenic |
CTTTGAGGCTGTTGAAATTG+AGG | 0.406522 | 7:+75691876 | None:intergenic |
TGAGCAACACAACCATAAAC+AGG | 0.407283 | 7:+75694233 | None:intergenic |
GAGAGATGGATTTGGGGTGT+GGG | 0.427932 | 7:-75694493 | None:intergenic |
GCTGCAGTTCATAAGGTGTT+TGG | 0.429613 | 7:-75694356 | MsaT038369.1:CDS |
TTGGGGTGTGGGGATGACGG+TGG | 0.437721 | 7:-75694482 | MsaT038369.1:CDS |
CCTCTTTGCTCTTCAACAAC+AGG | 0.440953 | 7:-75694210 | MsaT038369.1:intron |
GCATCAAGACGCTTATGAAC+TGG | 0.441293 | 7:+75694299 | None:intergenic |
GATTTGGGGTGTGGGGATGA+CGG | 0.456260 | 7:-75694485 | MsaT038369.1:CDS |
AAAATTCTCAAGGCAAAGCT+TGG | 0.480367 | 7:+75691676 | None:intergenic |
TGATTATAGGAATAGTATGA+TGG | 0.495256 | 7:+75691720 | None:intergenic |
TCTGCTATGAGGCTCTTGCT+AGG | 0.495453 | 7:-75694265 | MsaT038369.1:CDS |
CTGCTATGAGGCTCTTGCTA+GGG | 0.502068 | 7:-75694264 | MsaT038369.1:CDS |
GCGATTCAATATTGAAAGAC+GGG | 0.503238 | 7:+75691911 | None:intergenic |
AGTAAGGATGAATGCAAAGT+TGG | 0.505000 | 7:+75691840 | None:intergenic |
TCTTACATGTCCATGCACTT+TGG | 0.510678 | 7:-75691789 | MsaT038369.1:CDS |
GGTGTGGGGATGACGGTGGT+GGG | 0.515639 | 7:-75694478 | MsaT038369.1:CDS |
TGAAAGACGGGCTTGTACAT+AGG | 0.516839 | 7:+75691923 | None:intergenic |
TGTTGTTACTCTCTGCTATG+AGG | 0.534536 | 7:-75694276 | MsaT038369.1:CDS |
TAGAGAGAGAGATGGATTTG+GGG | 0.538982 | 7:-75694499 | None:intergenic |
AGAGATGGATTTGGGGTGTG+GGG | 0.541784 | 7:-75694492 | None:intergenic |
GGTGATATTGAAGAGCTTTG+AGG | 0.552521 | 7:+75691861 | None:intergenic |
TTGAGAAGAAAGTGTGTGAA+AGG | 0.553888 | 7:-75694434 | MsaT038369.1:CDS |
TGATGACAAATGATGAAGTA+AGG | 0.555832 | 7:+75691824 | None:intergenic |
GATGACGGTGGTGGGCCTTG+TGG | 0.575954 | 7:-75694470 | MsaT038369.1:CDS |
TGCGATTCAATATTGAAAGA+CGG | 0.576843 | 7:+75691910 | None:intergenic |
AAGAGGATGACCAAAGTGCA+TGG | 0.603188 | 7:+75691779 | None:intergenic |
TAATCAACAACTTCATGACC+AGG | 0.619495 | 7:-75691703 | MsaT038369.1:CDS |
CCTGTTGTTGAAGAGCAAAG+AGG | 0.633272 | 7:+75694210 | None:intergenic |
GAGCAACACAACCATAAACA+GGG | 0.707824 | 7:+75694234 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 75691683 | 75694510 | 75691683 | ID=MsaG038369 |
Chr7 | mRNA | 75691683 | 75694510 | 75691683 | ID=MsaT038369.1;Parent=MsaG038369 |
Chr7 | exon | 75691683 | 75691970 | 75691683 | ID=MsaT038369.1.exon2;Parent=MsaT038369.1 |
Chr7 | CDS | 75691683 | 75691970 | 75691683 | ID=cds.MsaT038369.1;Parent=MsaT038369.1 |
Chr7 | exon | 75694211 | 75694510 | 75694211 | ID=MsaT038369.1.exon1;Parent=MsaT038369.1 |
Chr7 | CDS | 75694211 | 75694510 | 75694211 | ID=cds.MsaT038369.1;Parent=MsaT038369.1 |
Gene Sequence |
Protein sequence |