AlfalfaGEDB | MsaG038415

M. sativa ssp. caerulea / MsaG038415

KEGG: K09260
GO: GO:0000003 GO:0000060 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0007275 GO:0008104 GO:0008134 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009909 GO:0009911 GO:0010033 GO:0010073 GO:0010074 GO:0010077 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015031 GO:0015833 GO:0017038 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0033993 GO:0034504 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045184 GO:0045893 GO:0045935 GO:0046907 GO:0048367 GO:0048507 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090 GO:0090567 GO:0098727 GO:0140110 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038415	XP_003623808.2	97.156	211	6	0	1	211	1	211	4.68e-149	422

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038415	sp\|O64645\|SOC1_ARATH	67.308	208	68	0	1	208	1	208	1.10e-89	265

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038415	tr\|G7L1F7\|G7L1F7_MEDTR	97.156	211	6	0	1	211	1	211	2.23e-149	422

TFs/TRs:

Gene ID	Type	Classification
MsaG038415	TF	MADS-MIKC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000034	MsaG038415	0.813047	5.371028e-51	9.885986e-49
MsaG000551	MsaG038415	0.813797	3.680363e-51	6.902856e-49
MsaG001156	MsaG038415	0.828959	1.205279e-54	3.385830e-52
MsaG001178	MsaG038415	0.800760	2.073087e-48	2.851532e-46
MsaG001179	MsaG038415	0.841840	6.913703e-58	2.860468e-55
MsaG001454	MsaG038415	0.818272	3.726723e-52	7.833287e-50
MsaG002016	MsaG038415	0.803479	5.756034e-49	8.424117e-47
MsaG003083	MsaG038415	0.851193	1.988120e-60	1.122745e-57
MsaG003276	MsaG038415	0.859503	7.753186e-63	5.915518e-60
MsaG003287	MsaG038415	0.814768	2.250724e-51	4.325548e-49
MsaG003288	MsaG038415	0.810374	2.035321e-50	3.507691e-48
MsaG003867	MsaG038415	0.800858	1.980686e-48	2.730370e-46
MsaG004282	MsaG038415	0.822368	4.331699e-53	1.014551e-50
MsaG005148	MsaG038415	0.805136	2.609189e-49	3.968296e-47
MsaG005150	MsaG038415	0.800476	2.367636e-48	3.235800e-46
MsaG005839	MsaG038415	0.810443	1.967740e-50	3.396937e-48
MsaG007067	MsaG038415	0.809518	3.104924e-50	5.241186e-48
MsaG007423	MsaG038415	0.806071	1.664996e-49	2.588212e-47
MsaG007428	MsaG038415	0.809489	3.150232e-50	5.313973e-48
MsaG007666	MsaG038415	0.815970	1.220302e-51	2.417630e-49
MsaG007868	MsaG038415	0.807214	9.573841e-50	1.528937e-47
MsaG008101	MsaG038415	0.807531	8.206860e-50	1.320608e-47
MsaG008538	MsaG038415	0.813294	4.743170e-51	8.784055e-49
MsaG010095	MsaG038415	0.837604	8.647855e-57	3.133330e-54
MsaG010107	MsaG038415	0.823369	2.538924e-53	6.109600e-51
MsaG011598	MsaG038415	0.832745	1.436336e-55	4.500530e-53
MsaG011646	MsaG038415	0.819544	1.921132e-52	4.174513e-50
MsaG012326	MsaG038415	0.811798	1.003568e-50	1.790853e-48
MsaG012941	MsaG038415	0.804735	3.163210e-49	4.766178e-47
MsaG013658	MsaG038415	0.817421	5.789072e-52	1.190450e-49
MsaG014422	MsaG038415	0.813226	4.906923e-51	9.072479e-49
MsaG015173	MsaG038415	0.848378	1.205520e-59	6.182150e-57
MsaG015268	MsaG038415	0.803699	5.185405e-49	7.627802e-47
MsaG015491	MsaG038415	0.806006	1.717427e-49	2.665503e-47
MsaG016427	MsaG038415	0.804009	4.472383e-49	6.626558e-47
MsaG016724	MsaG038415	0.822704	3.622938e-53	8.562458e-51
MsaG016920	MsaG038415	0.849217	7.071670e-60	3.732056e-57
MsaG018183	MsaG038415	0.809243	3.554369e-50	5.959744e-48
MsaG018452	MsaG038415	0.853432	4.613470e-61	2.818520e-58
MsaG018553	MsaG038415	0.827071	3.415501e-54	9.099791e-52
MsaG019076	MsaG038415	0.813675	3.913800e-51	7.317934e-49
MsaG019182	MsaG038415	0.846514	3.898156e-59	1.878024e-56
MsaG020314	MsaG038415	0.846676	3.522178e-59	1.706104e-56
MsaG020458	MsaG038415	0.807318	9.102003e-50	1.457191e-47
MsaG020450	MsaG038415	0.812848	5.933572e-51	1.086722e-48
MsaG020873	MsaG038415	0.820631	1.086394e-52	2.429509e-50
MsaG021088	MsaG038415	0.824042	1.769308e-53	4.336124e-51
MsaG021300	MsaG038415	0.813460	4.363043e-51	8.114066e-49
MsaG021405	MsaG038415	0.824534	1.357265e-53	3.371086e-51
MsaG021575	MsaG038415	0.807510	8.292742e-50	1.333752e-47
MsaG021896	MsaG038415	0.846859	3.141910e-59	1.531243e-56
MsaG022438	MsaG038415	0.805801	1.896150e-49	2.928774e-47
MsaG022441	MsaG038415	0.815148	1.856005e-51	3.601137e-49
MsaG022923	MsaG038415	0.825343	8.764906e-54	2.225764e-51
MsaG023591	MsaG038415	0.826120	5.745540e-54	1.490820e-51
MsaG023744	MsaG038415	0.828073	1.968467e-54	5.393975e-52
MsaG023683	MsaG038415	0.804673	3.257569e-49	4.901298e-47
MsaG023882	MsaG038415	0.838765	4.358068e-57	1.636864e-54
MsaG024026	MsaG038415	0.806168	1.588442e-49	2.474907e-47
MsaG024239	MsaG038415	0.801969	1.175403e-48	1.661624e-46
MsaG028375	MsaG038415	0.805752	1.941533e-49	2.995469e-47
MsaG028489	MsaG038415	0.804637	3.314874e-49	4.983259e-47
MsaG029862	MsaG038415	0.807353	8.949314e-50	1.433963e-47
MsaG029899	MsaG038415	0.822843	3.363330e-53	7.978843e-51
MsaG030198	MsaG038415	0.807340	9.004930e-50	1.442436e-47
MsaG030840	MsaG038415	0.832324	1.824066e-55	5.645581e-53
MsaG030928	MsaG038415	0.838416	5.357100e-57	1.990221e-54
MsaG031436	MsaG038415	0.859739	6.592382e-63	5.074882e-60
MsaG033354	MsaG038415	0.837599	8.672982e-57	3.141968e-54
MsaG033369	MsaG038415	0.805695	1.994969e-49	3.073854e-47
MsaG033370	MsaG038415	0.839258	3.253261e-57	1.240756e-54
MsaG033766	MsaG038415	0.801279	1.626037e-48	2.262870e-46
MsaG034287	MsaG038415	0.807436	8.596197e-50	1.380103e-47
MsaG034288	MsaG038415	0.826829	3.900726e-54	1.032259e-51
MsaG035210	MsaG038415	0.836636	1.524617e-56	5.363898e-54
MsaG035270	MsaG038415	0.819192	2.309400e-52	4.972341e-50
MsaG036217	MsaG038415	0.810624	1.799052e-50	3.119350e-48
MsaG037853	MsaG038415	0.834202	6.245219e-56	2.042525e-53
MsaG038415	MsaG038986	0.814918	2.085986e-51	4.024010e-49
MsaG038415	MsaG038987	0.817592	5.299718e-52	1.094600e-49
MsaG038415	MsaG038990	0.852087	1.112913e-60	6.484940e-58
MsaG038415	MsaG039613	0.825730	7.103184e-54	1.823214e-51
MsaG038415	MsaG039723	0.844185	1.653426e-58	7.376133e-56
MsaG038415	MsaG039724	0.816729	8.267927e-52	1.670102e-49
MsaG038415	MsaG039645	0.806980	1.072563e-49	1.703447e-47
MsaG038415	MsaG039647	0.804255	3.977619e-49	5.927169e-47
MsaG038415	MsaG039739	0.849114	7.552652e-60	3.971820e-57
MsaG038415	MsaG040077	0.824508	1.376361e-53	3.416098e-51
MsaG038415	MsaG040384	0.806570	1.308080e-49	2.057620e-47
MsaG038415	MsaG040740	0.849456	6.072771e-60	3.231175e-57
MsaG038415	MsaG040775	0.870772	2.311440e-66	2.767069e-63
MsaG038415	MsaG040994	0.819765	1.711756e-52	3.741201e-50
MsaG038415	MsaG041368	0.808056	6.355754e-50	1.035716e-47
MsaG038415	MsaG043665	0.843772	2.129971e-58	9.375422e-56
MsaG038415	MsaG044131	0.847031	2.819866e-59	1.382264e-56
MsaG038415	MsaG044284	0.811917	9.458176e-51	1.692768e-48
MsaG038415	MsaG044323	0.833014	1.232485e-55	3.892098e-53
MsaG038415	MsaG044352	0.846059	5.178555e-59	2.457477e-56
MsaG038415	MsaG044354	0.847462	2.150573e-59	1.069617e-56
MsaG038415	MsaG045125	0.861635	1.763969e-63	1.459511e-60
MsaG038415	MsaG045339	0.812632	6.612424e-51	1.204553e-48
MsaG038415	MsaG045423	0.814826	2.185845e-51	4.206984e-49
MsaG038415	MsaG045446	0.808595	4.885384e-50	8.064785e-48
MsaG038415	MsaG046042	0.806294	1.494571e-49	2.335723e-47
MsaG038415	MsaG046051	0.812927	5.702661e-51	1.046507e-48
MsaG038415	MsaG046307	0.806486	1.362572e-49	2.139059e-47
MsaG038415	MsaG046423	0.804399	3.713563e-49	5.552083e-47
MsaG038415	MsaG046722	0.836150	2.023738e-56	7.016945e-54
MsaG038415	MsaG005390	0.808442	5.262933e-50	8.656359e-48
MsaG038415	MsaG008553	0.807646	7.762717e-50	1.252546e-47
MsaG038415	MsaG008770	0.812194	8.236376e-51	1.484117e-48
MsaG038415	MsaG019037	0.810430	1.979661e-50	3.416466e-48
MsaG038415	MsaG021169	0.821134	8.334365e-53	1.888894e-50
MsaG038415	MsaG019920	0.813750	3.769847e-51	7.062072e-49
MsaG038415	MsaG027786	0.819768	1.709089e-52	3.735635e-50
MsaG038415	MsaG032859	0.831681	2.625982e-55	7.977582e-53
MsaG038415	MsaG031221	0.822996	3.099695e-53	7.383942e-51
MsaG038415	MsaG031766	0.812396	7.442276e-51	1.347816e-48
MsaG038415	MsaG031807	0.803999	4.494072e-49	6.656998e-47
MsaG038415	MsaG032472	0.802636	8.582939e-49	1.232005e-46
MsaG038415	MsaG033582	0.800414	2.437342e-48	3.326414e-46
MsaG038415	MsaG036352	0.821267	7.767197e-53	1.766572e-50
MsaG038415	MsaG038716	0.800260	2.618476e-48	3.561134e-46
MsaG038415	MsaG036054	0.831944	2.262690e-55	6.926829e-53
MsaG038415	MsaG035298	0.802153	1.077752e-48	1.529954e-46
MsaG038415	MsaG037161	0.827706	2.409302e-54	6.534480e-52
MsaG038415	MsaG035677	0.811717	1.044872e-50	1.860837e-48
MsaG038415	MsaG043831	0.800404	2.448104e-48	3.340422e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038415	MtrunA17_Chr7g0246431	97.156	211	6	0	1	211	1	211	4.30e-153	422
MsaG038415	MtrunA17_Chr8g0351031	69.014	213	60	4	1	208	1	212	4.41e-97	281
MsaG038415	MtrunA17_Chr8g0351041	70.186	161	47	1	1	160	1	161	3.92e-78	231
MsaG038415	MtrunA17_Chr4g0057151	58.454	207	77	1	1	207	1	198	1.13e-73	221
MsaG038415	MtrunA17_Chr8g0366231	50.000	168	83	1	1	167	1	168	1.58e-50	164
MsaG038415	MtrunA17_Chr3g0077501	46.951	164	87	0	1	164	1	164	4.65e-48	157
MsaG038415	MtrunA17_Chr2g0279821	47.647	170	88	1	1	170	1	169	7.19e-48	157
MsaG038415	MtrunA17_Chr3g0097101	42.289	201	106	1	1	191	16	216	9.42e-48	157
MsaG038415	MtrunA17_Chr8g0351051	40.598	234	103	2	1	198	1	234	9.95e-48	157
MsaG038415	MtrunA17_Chr4g0061691	49.112	169	85	1	1	168	1	169	4.32e-47	154
MsaG038415	MtrunA17_Chr5g0420091	44.175	206	110	3	1	203	1	204	5.08e-47	154
MsaG038415	MtrunA17_Chr2g0284911	46.914	162	86	0	3	164	18	179	4.94e-46	153
MsaG038415	MtrunA17_Chr5g0420081	48.538	171	87	1	1	170	1	171	1.67e-45	150
MsaG038415	MtrunA17_Chr4g0061671	48.256	172	78	4	1	167	1	166	2.01e-45	149
MsaG038415	MtrunA17_Chr8g0380021	44.848	165	91	0	3	167	19	183	1.21e-44	149
MsaG038415	MtrunA17_Chr7g0220121	47.059	170	87	2	1	169	1	168	1.85e-44	149
MsaG038415	MtrunA17_Chr7g0220111	47.929	169	86	2	1	168	1	168	2.13e-43	145
MsaG038415	MtrunA17_Chr6g0455511	47.337	169	87	2	1	168	1	168	7.16e-43	144
MsaG038415	MtrunA17_Chr4g0049541	46.784	171	88	2	1	170	1	169	3.37e-41	139
MsaG038415	MtrunA17_Chr3g0122251	48.276	174	85	4	1	170	1	173	4.33e-41	140
MsaG038415	MtrunA17_Chr4g0018421	46.154	169	89	2	1	167	1	169	2.00e-40	137
MsaG038415	MtrunA17_Chr5g0411691	41.622	185	105	2	1	185	1	182	2.18e-37	130
MsaG038415	MtrunA17_Chr1g0204111	38.679	212	124	3	1	208	17	226	1.26e-36	128
MsaG038415	MtrunA17_Chr4g0049901	44.886	176	91	2	1	172	27	200	2.36e-36	127
MsaG038415	MtrunA17_Chr4g0020221	45.251	179	82	2	1	170	1	172	3.57e-36	127
MsaG038415	MtrunA17_Chr5g0412461	39.614	207	119	4	1	205	1	203	7.17e-36	125
MsaG038415	MtrunA17_Chr6g0474371	46.835	158	82	2	1	156	1	158	1.49e-35	124
MsaG038415	MtrunA17_Chr5g0412271	38.095	210	119	4	1	205	1	204	2.87e-35	124
MsaG038415	MtrunA17_Chr1g0164791	40.805	174	96	3	1	168	1	173	7.11e-35	123
MsaG038415	MtrunA17_Chr5g0427401	44.444	171	85	2	1	167	1	165	1.81e-34	122
MsaG038415	MtrunA17_Chr3g0142191	43.210	162	77	4	1	156	1	153	2.07e-32	117
MsaG038415	MtrunA17_Chr3g0125241	38.462	169	93	4	1	167	26	185	6.78e-31	112
MsaG038415	MtrunA17_Chr1g0159661	37.870	169	94	3	1	167	1	160	1.47e-29	108
MsaG038415	MtrunA17_Chr7g0246381	78.333	60	13	0	1	60	1	60	1.17e-27	100
MsaG038415	MtrunA17_Chr8g0377561	79.310	58	12	0	1	58	1	58	3.00e-27	99.8
MsaG038415	MtrunA17_Chr5g0404951	36.994	173	98	4	1	167	1	168	9.13e-27	102
MsaG038415	MtrunA17_Chr1g0173161	76.667	60	14	0	1	60	1	60	5.40e-26	96.3
MsaG038415	MtrunA17_Chr2g0308251	66.667	69	23	0	1	69	1	69	1.18e-25	95.5
MsaG038415	MtrunA17_Chr5g0427921	70.000	60	18	0	1	60	1	60	2.80e-25	93.6
MsaG038415	MtrunA17_Chr3g0134451	61.429	70	26	1	1	69	1	70	6.34e-22	91.3
MsaG038415	MtrunA17_Chr5g0425191	66.102	59	20	0	1	59	1	59	4.14e-21	84.3
MsaG038415	MtrunA17_Chr4g0044071	62.712	59	22	0	1	59	1	59	1.02e-20	83.6
MsaG038415	MtrunA17_Chr1g0175601	41.667	108	54	3	1	102	1	105	8.43e-19	80.1
MsaG038415	MtrunA17_Chr1g0166611	75.000	48	12	0	13	60	17	64	1.73e-18	78.2
MsaG038415	MtrunA17_Chr1g0208581	39.450	109	64	1	3	109	10	118	4.01e-18	79.7
MsaG038415	MtrunA17_Chr2g0292791	53.731	67	31	0	3	69	10	76	4.17e-18	79.7
MsaG038415	MtrunA17_Chr1g0208561	50.746	67	33	0	3	69	10	76	1.02e-17	78.6
MsaG038415	MtrunA17_Chr4g0052061	33.582	134	83	2	1	131	1	131	1.11e-17	76.6
MsaG038415	MtrunA17_Chr3g0089141	50.746	67	33	0	3	69	10	76	1.14e-17	78.2
MsaG038415	MtrunA17_Chr1g0206701	39.655	116	66	2	3	116	10	123	2.08e-17	77.8
MsaG038415	MtrunA17_Chr3g0099421	39.091	110	65	1	3	110	35	144	3.07e-17	77.8
MsaG038415	MtrunA17_Chr3g0099411	38.182	110	66	1	3	110	10	119	5.54e-17	76.3
MsaG038415	MtrunA17_Chr1g0206991	30.811	185	105	5	3	178	10	180	6.66e-17	75.5
MsaG038415	MtrunA17_Chr4g0018951	36.508	126	69	2	14	131	24	146	7.09e-17	74.7
MsaG038415	MtrunA17_Chr1g0180591	37.500	104	62	1	1	101	1	104	9.11e-17	74.7
MsaG038415	MtrunA17_Chr1g0206721	38.182	110	66	1	3	110	10	119	9.49e-17	75.9
MsaG038415	MtrunA17_Chr5g0419601	49.383	81	37	1	3	83	10	86	1.04e-16	75.9
MsaG038415	MtrunA17_Chr1g0175611	37.037	108	59	2	1	102	1	105	2.17e-16	73.6
MsaG038415	MtrunA17_Chr8g0355091	50.746	67	33	0	3	69	10	76	2.17e-16	75.1
MsaG038415	MtrunA17_Chr1g0149391	39.091	110	65	1	3	110	10	119	2.36e-16	75.1
MsaG038415	MtrunA17_Chr2g0317451	52.239	67	32	0	3	69	10	76	2.59e-16	74.7
MsaG038415	MtrunA17_Chr2g0317481	52.239	67	32	0	3	69	10	76	2.72e-16	74.7
MsaG038415	MtrunA17_Chr5g0422421	53.731	67	31	0	3	69	10	76	2.81e-16	74.7
MsaG038415	MtrunA17_Chr8g0357771	46.377	69	37	0	1	69	1	69	3.04e-16	73.6
MsaG038415	MtrunA17_Chr4g0052081	32.609	138	87	1	1	132	1	138	3.35e-16	73.2
MsaG038415	MtrunA17_Chr2g0325971	49.254	67	34	0	3	69	10	76	3.57e-16	74.3
MsaG038415	MtrunA17_Chr1g0187361	50.746	67	33	0	3	69	10	76	4.27e-16	74.3
MsaG038415	MtrunA17_Chr1g0188671	50.746	67	33	0	3	69	48	114	5.87e-16	74.3
MsaG038415	MtrunA17_Chr1g0169761	37.500	104	62	1	1	101	1	104	7.76e-16	72.4
MsaG038415	MtrunA17_Chr8g0376821	46.377	69	37	0	1	69	1	69	1.17e-15	72.0
MsaG038415	MtrunA17_Chr5g0422941	50.746	67	33	0	3	69	10	76	3.21e-15	72.0
MsaG038415	MtrunA17_Chr8g0379021	55.357	56	25	0	3	58	13	68	4.67e-15	70.1
MsaG038415	MtrunA17_Chr4g0060841	30.769	182	96	5	1	154	1	180	5.10e-15	72.8
MsaG038415	MtrunA17_Chr5g0417661	54.717	53	24	0	1	53	56	108	5.97e-15	68.9
MsaG038415	MtrunA17_Chr4g0074101	43.478	69	39	0	1	69	1	69	1.22e-14	69.7
MsaG038415	MtrunA17_Chr2g0333981	45.205	73	40	0	1	73	11	83	1.46e-14	68.9
MsaG038415	MtrunA17_Chr3g0119901	35.849	106	63	2	3	103	10	115	2.28e-14	68.9
MsaG038415	MtrunA17_Chr2g0300421	46.269	67	36	0	3	69	10	76	5.31e-14	67.4
MsaG038415	MtrunA17_Chr1g0187351	46.269	67	36	0	11	77	1	67	7.68e-14	64.3
MsaG038415	MtrunA17_Chr3g0089151	45.714	70	36	1	2	69	7	76	1.07e-13	65.5
MsaG038415	MtrunA17_Chr2g0300441	46.154	65	35	0	5	69	12	76	1.96e-13	67.0
MsaG038415	MtrunA17_Chr3g0085241	33.962	106	65	2	3	103	42	147	3.49e-13	66.6
MsaG038415	MtrunA17_Chr3g0111841	50.000	60	30	0	7	66	1	60	3.78e-13	62.4
MsaG038415	MtrunA17_Chr8g0356071	30.693	101	70	0	1	101	1	101	4.19e-13	64.7
MsaG038415	MtrunA17_Chr1g0206691	49.153	59	30	0	11	69	1	59	5.89e-13	65.5
MsaG038415	MtrunA17_Chr2g0308271	33.043	115	76	1	54	168	27	140	2.42e-12	63.5
MsaG038415	MtrunA17_Chr4g0071601	47.458	59	31	0	15	73	25	83	2.16e-11	60.5
MsaG038415	MtrunA17_Chr6g0457851	27.273	154	95	4	1	141	11	160	2.28e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038415	AT2G45660.1	67.308	208	68	0	1	208	1	208	1.12e-90	265
MsaG038415	AT2G45660.2	75.949	158	38	0	1	158	1	158	1.24e-83	245
MsaG038415	AT5G62165.3	55.399	213	91	2	1	212	1	210	2.41e-75	226
MsaG038415	AT5G62165.1	55.399	213	91	2	1	212	1	210	2.41e-75	226
MsaG038415	AT5G62165.2	55.399	213	91	2	1	212	1	210	2.41e-75	226
MsaG038415	AT4G22950.2	64.286	168	57	2	1	167	1	166	5.16e-69	209
MsaG038415	AT4G22950.3	56.250	208	87	3	1	207	1	205	2.07e-68	209
MsaG038415	AT4G22950.1	56.250	208	87	3	1	207	1	205	2.07e-68	209
MsaG038415	AT5G62165.10	52.582	213	83	3	1	212	1	196	1.80e-67	206
MsaG038415	AT5G62165.4	52.582	213	83	3	1	212	1	196	1.80e-67	206
MsaG038415	AT5G62165.17	62.821	156	58	0	1	156	1	156	1.23e-66	202
MsaG038415	AT5G62165.12	62.821	156	58	0	1	156	1	156	1.23e-66	202
MsaG038415	AT5G62165.11	62.821	156	58	0	1	156	1	156	1.23e-66	202
MsaG038415	AT5G62165.6	64.789	142	50	0	1	142	1	142	2.19e-62	191
MsaG038415	AT5G62165.9	64.789	142	50	0	1	142	1	142	2.19e-62	191
MsaG038415	AT5G62165.7	64.789	142	50	0	1	142	1	142	2.19e-62	191
MsaG038415	AT5G62165.8	64.789	142	50	0	1	142	1	142	2.19e-62	191
MsaG038415	AT5G62165.13	64.789	142	50	0	1	142	1	142	2.19e-62	191
MsaG038415	AT5G51870.1	49.282	209	98	2	1	208	1	202	7.88e-62	192
MsaG038415	AT5G51870.4	49.065	214	103	2	1	208	1	214	1.93e-61	191
MsaG038415	AT5G51870.3	49.065	214	103	2	1	208	11	224	2.91e-61	191
MsaG038415	AT4G11880.2	64.557	158	52	3	1	156	1	156	4.39e-61	189
MsaG038415	AT4G11880.3	64.557	158	52	3	1	156	1	156	4.39e-61	189
MsaG038415	AT4G11880.4	54.327	208	93	2	1	207	1	207	5.54e-61	190
MsaG038415	AT4G11880.1	54.327	208	93	2	1	207	1	207	5.54e-61	190
MsaG038415	AT5G51860.2	47.664	214	89	4	1	208	1	197	3.44e-58	182
MsaG038415	AT5G51860.1	47.465	217	94	5	1	208	1	206	9.79e-57	179
MsaG038415	AT5G60910.1	51.462	171	82	1	1	170	1	171	5.78e-51	165
MsaG038415	AT5G51870.2	56.164	146	63	1	1	145	1	146	6.11e-51	163
MsaG038415	AT5G51870.5	56.164	146	63	1	1	145	24	169	2.48e-50	162
MsaG038415	AT4G18960.1	43.781	201	88	2	3	178	19	219	9.37e-49	160
MsaG038415	AT4G09960.1	47.904	167	87	0	1	167	1	167	1.71e-48	159
MsaG038415	AT4G09960.6	47.904	167	87	0	1	167	2	168	1.85e-48	158
MsaG038415	AT4G09960.5	47.904	167	87	0	1	167	11	177	2.56e-48	158
MsaG038415	AT1G69120.2	49.123	171	86	1	1	170	1	171	5.53e-48	157
MsaG038415	AT4G09960.3	47.904	167	87	0	1	167	27	193	5.84e-48	158
MsaG038415	AT1G26310.1	45.192	208	89	4	1	183	1	208	7.94e-48	157
MsaG038415	AT1G69120.1	49.123	171	86	1	1	170	1	171	2.00e-47	157
MsaG038415	AT3G58780.1	46.328	177	85	1	1	167	16	192	2.24e-47	156
MsaG038415	AT3G58780.5	46.328	177	85	1	1	167	22	198	2.51e-47	156
MsaG038415	AT4G09960.2	52.113	142	68	0	1	142	1	142	3.20e-47	155
MsaG038415	AT2G45650.1	50.898	167	81	1	1	167	1	166	7.78e-47	155
MsaG038415	AT4G09960.4	51.389	144	70	0	1	144	96	239	6.99e-46	155
MsaG038415	AT2G42830.1	46.667	165	88	0	3	167	18	182	1.39e-45	152
MsaG038415	AT5G15800.1	49.704	169	84	1	1	168	1	169	7.05e-45	150
MsaG038415	AT2G42830.2	46.296	162	87	0	3	164	18	179	9.79e-45	149
MsaG038415	AT5G15800.2	49.704	169	84	1	1	168	1	169	1.69e-44	149
MsaG038415	AT2G03710.3	45.349	172	91	2	1	170	1	171	2.67e-44	146
MsaG038415	AT3G58780.4	52.143	140	67	0	3	142	18	157	4.81e-44	149
MsaG038415	AT2G03710.1	46.154	169	88	2	1	167	1	168	6.32e-44	147
MsaG038415	AT2G03710.2	46.154	169	88	2	1	167	1	168	7.39e-44	147
MsaG038415	AT1G24260.2	47.423	194	91	5	1	183	1	194	8.79e-44	147
MsaG038415	AT3G02310.2	47.929	169	87	1	1	168	1	169	2.21e-43	144
MsaG038415	AT1G24260.1	47.150	193	92	5	1	183	1	193	2.23e-43	146
MsaG038415	AT3G02310.1	47.929	169	87	1	1	168	1	169	2.71e-43	146
MsaG038415	AT3G61120.1	49.102	167	83	1	1	167	1	165	1.23e-42	144
MsaG038415	AT3G58780.3	42.000	200	81	2	3	167	18	217	1.50e-42	144
MsaG038415	AT3G58780.2	44.633	177	81	2	1	167	16	185	2.07e-42	143
MsaG038415	AT1G24260.3	47.059	187	88	5	1	183	1	180	5.95e-42	142
MsaG038415	AT3G57230.1	46.471	170	90	1	1	170	1	169	2.18e-41	140
MsaG038415	AT3G57230.4	46.471	170	90	1	1	170	1	169	2.18e-41	140
MsaG038415	AT3G57230.2	50.704	142	69	1	1	142	1	141	4.01e-40	134
MsaG038415	AT5G13790.2	47.059	170	86	1	1	170	1	166	8.10e-40	137
MsaG038415	AT3G57390.3	44.068	177	92	1	1	170	1	177	1.88e-39	135
MsaG038415	AT4G37940.1	42.941	170	96	1	1	170	1	169	1.95e-39	135
MsaG038415	AT3G57390.1	44.068	177	92	1	1	170	1	177	4.50e-39	135
MsaG038415	AT5G13790.1	46.471	170	84	1	1	170	1	163	5.07e-39	135
MsaG038415	AT3G30260.1	46.897	145	76	1	1	144	1	145	2.41e-38	133
MsaG038415	AT5G62165.14	69.318	88	27	0	1	88	1	88	2.76e-38	128
MsaG038415	AT4G37940.3	45.890	146	78	1	1	146	1	145	1.46e-37	129
MsaG038415	AT4G37940.4	43.023	172	95	3	1	171	1	170	4.44e-37	129
MsaG038415	AT4G24540.1	44.910	167	92	0	1	167	1	167	6.05e-37	129
MsaG038415	AT2G14210.1	46.429	168	88	2	1	167	1	167	8.54e-37	129
MsaG038415	AT2G22540.3	44.000	175	94	2	1	173	1	173	1.11e-36	129
MsaG038415	AT2G22540.1	44.000	175	94	2	1	173	1	173	1.11e-36	129
MsaG038415	AT2G14210.2	46.429	168	88	2	1	167	1	167	1.13e-36	128
MsaG038415	AT2G22630.1	42.373	177	87	3	1	170	1	169	5.72e-36	126
MsaG038415	AT2G22630.2	42.373	177	87	3	1	170	1	169	5.72e-36	126
MsaG038415	AT5G10140.4	44.025	159	76	4	1	156	1	149	7.66e-34	119
MsaG038415	AT5G23260.2	42.690	171	93	2	1	169	1	168	2.72e-33	120
MsaG038415	AT5G23260.4	42.690	171	93	2	1	169	17	184	4.92e-33	120
MsaG038415	AT5G10140.2	44.898	147	68	4	1	144	1	137	7.18e-32	114
MsaG038415	AT2G22540.2	41.714	175	93	3	1	173	1	168	7.28e-32	116
MsaG038415	AT5G10140.1	44.898	147	68	4	1	144	1	137	9.45e-32	114
MsaG038415	AT5G10140.3	44.898	147	68	4	1	144	1	137	1.49e-31	114
MsaG038415	AT5G65050.2	37.569	181	104	2	1	180	1	173	2.44e-31	113
MsaG038415	AT5G65060.3	36.649	191	109	3	1	187	1	183	1.07e-30	112
MsaG038415	AT5G65050.3	39.766	171	94	2	1	170	1	163	1.11e-30	112
MsaG038415	AT5G65060.1	39.181	171	95	2	1	170	1	163	2.57e-30	111
MsaG038415	AT5G65070.1	40.351	171	93	2	1	170	1	163	3.20e-30	110
MsaG038415	AT5G23260.1	42.105	171	89	3	1	169	17	179	5.95e-30	112
MsaG038415	AT5G23260.3	46.528	144	72	2	1	142	1	141	8.31e-30	110
MsaG038415	AT3G54340.1	40.373	161	89	3	1	159	1	156	9.23e-30	110
MsaG038415	AT1G71692.1	42.857	175	92	4	1	167	1	175	1.80e-29	109
MsaG038415	AT1G77080.11	43.275	171	88	2	1	170	1	163	9.34e-29	106
MsaG038415	AT1G77080.5	43.275	171	88	2	1	170	1	163	1.04e-28	106
MsaG038415	AT1G77080.4	43.275	171	88	2	1	170	1	163	1.12e-28	107
MsaG038415	AT5G65050.1	39.610	154	84	2	1	153	1	146	7.99e-28	104
MsaG038415	AT5G65080.3	40.127	157	85	2	1	156	8	156	8.11e-28	104
MsaG038415	AT5G65050.5	38.596	171	85	3	1	170	1	152	1.15e-27	103
MsaG038415	AT5G65070.4	41.958	143	74	2	1	142	1	135	3.15e-27	101
MsaG038415	AT5G65060.2	38.012	171	86	3	1	170	1	152	3.61e-27	102
MsaG038415	AT5G65070.3	35.897	195	100	2	1	170	1	195	1.58e-26	102
MsaG038415	AT5G20240.2	40.426	141	77	3	1	139	1	136	1.59e-26	100
MsaG038415	AT1G77080.2	44.444	171	82	4	1	170	1	159	5.67e-26	99.8
MsaG038415	AT5G20240.1	40.426	141	77	3	1	139	1	136	1.55e-25	99.0
MsaG038415	AT5G65070.2	36.410	195	98	4	1	170	1	194	9.21e-25	97.4
MsaG038415	AT5G65080.2	38.710	155	87	1	1	155	8	154	1.38e-24	96.3
MsaG038415	AT1G31140.1	38.356	146	87	2	1	144	1	145	6.71e-24	94.7
MsaG038415	AT1G77080.8	37.879	198	87	3	1	170	1	190	9.16e-24	94.7
MsaG038415	AT1G31140.2	38.095	147	88	2	1	144	1	147	1.70e-23	94.0
MsaG038415	AT1G77080.12	43.396	159	77	4	1	158	1	147	8.32e-23	90.1
MsaG038415	AT1G22130.1	32.804	189	88	4	1	150	1	189	4.64e-22	92.4
MsaG038415	AT1G77980.1	32.000	200	95	4	1	161	1	198	4.86e-22	92.4
MsaG038415	AT5G65070.5	35.359	181	91	4	1	156	1	180	7.86e-22	89.4
MsaG038415	AT5G62165.15	44.762	105	54	2	109	212	56	157	1.17e-19	82.4
MsaG038415	AT5G62165.5	44.762	105	54	2	109	212	56	157	1.17e-19	82.4
MsaG038415	AT1G77950.3	52.857	70	32	1	1	69	1	70	2.48e-18	80.9
MsaG038415	AT1G77950.2	52.857	70	32	1	1	69	1	70	2.48e-18	80.9
MsaG038415	AT1G77950.1	52.857	70	32	1	1	69	1	70	2.48e-18	80.9
MsaG038415	AT1G77950.4	52.857	70	32	1	1	69	1	70	2.48e-18	80.9
MsaG038415	AT2G34440.1	36.538	104	63	1	1	104	1	101	2.22e-17	76.6
MsaG038415	AT1G18750.1	29.775	178	95	5	1	150	1	176	3.38e-17	79.3
MsaG038415	AT1G18750.4	29.775	178	95	5	1	150	1	176	3.53e-17	79.3
MsaG038415	AT4G37435.1	57.627	59	25	0	1	59	1	59	1.43e-16	74.7
MsaG038415	AT4G36590.1	52.239	67	32	0	3	69	8	74	1.74e-16	75.9
MsaG038415	AT1G18750.3	32.278	158	67	5	1	154	1	122	2.36e-16	77.0
MsaG038415	AT5G60440.1	43.023	86	45	1	3	88	8	89	7.64e-16	74.7
MsaG038415	AT5G60910.2	39.450	109	66	0	62	170	1	109	9.36e-16	72.4
MsaG038415	AT3G04100.1	38.835	103	60	2	5	105	17	118	1.10e-15	72.8
MsaG038415	AT2G03060.3	30.653	199	96	7	1	169	1	187	1.39e-15	74.7
MsaG038415	AT2G03060.7	30.653	199	96	7	1	169	1	187	1.39e-15	74.7
MsaG038415	AT2G03060.1	30.653	199	96	7	1	169	1	187	1.39e-15	74.7
MsaG038415	AT2G03060.2	30.653	199	96	7	1	169	1	187	1.70e-15	74.7
MsaG038415	AT3G66656.1	45.714	70	38	0	1	70	1	70	2.11e-15	71.6
MsaG038415	AT2G24840.1	44.898	98	45	3	3	92	64	160	4.92e-15	72.0
MsaG038415	AT1G01530.1	55.357	56	25	0	3	58	8	63	6.28e-15	71.6
MsaG038415	AT1G47760.1	44.118	68	38	0	1	68	1	68	9.55e-15	70.1
MsaG038415	AT4G18960.3	29.936	157	84	3	48	178	49	205	6.57e-14	68.6
MsaG038415	AT4G18960.2	29.936	157	84	3	48	178	49	205	6.57e-14	68.6
MsaG038415	AT4G18960.4	33.051	118	78	1	48	164	49	166	7.01e-14	67.4
MsaG038415	AT1G69120.3	36.697	109	69	0	62	170	1	109	3.70e-13	65.9
MsaG038415	AT1G72350.1	43.299	97	49	3	3	98	44	135	4.68e-13	66.2
MsaG038415	AT1G65360.1	41.176	68	40	0	3	70	8	75	4.81e-13	66.2
MsaG038415	AT1G69540.1	52.830	53	25	0	1	53	1	53	4.85e-13	67.4
MsaG038415	AT1G69540.2	52.830	53	25	0	1	53	1	53	6.15e-13	67.0
MsaG038415	AT1G28460.1	49.231	65	33	0	5	69	11	75	9.47e-13	64.7
MsaG038415	AT1G29962.1	47.692	65	34	0	5	69	11	75	3.12e-12	63.2
MsaG038415	AT5G62165.16	39.048	105	46	3	109	212	56	143	6.72e-12	61.2
MsaG038415	AT1G28450.1	44.615	65	36	0	5	69	11	75	5.55e-11	59.7

Find 31 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTGATGATCCTTTGTTGT+TGG	0.276354	7:+76305869	None:intergenic
GAAACTCATGGGAGAAGGTT+TGG	0.348685	7:-76307706	MsaT038415.1:CDS
CTTGGACTGCTTTCAGCATA+GGG	0.389120	7:+76305833	None:intergenic
GTTGGCTGTGGCTGTGGCTG+TGG	0.394248	7:+76305887	None:intergenic
AGGTTTGGGATCATGCTCTT+TGG	0.396343	7:-76307691	MsaT038415.1:CDS
AAACTCATGGGAGAAGGTTT+GGG	0.397479	7:-76307705	MsaT038415.1:CDS
TTGCATTGGTTGAGCACTCC+TGG	0.413073	7:+76311836	None:intergenic
TTTGTTGTTGGCTGTGGCTG+TGG	0.414227	7:+76305881	None:intergenic
TGATCCTTTGTTGTTGGCTG+TGG	0.428414	7:+76305875	None:intergenic
GCTTGGACTGCTTTCAGCAT+AGG	0.443426	7:+76305832	None:intergenic
GGCTGTGGCTGTGGCTGTGG+TGG	0.463262	7:+76305890	None:intergenic
AAATGCCAGGCTCGCTAAGC+AGG	0.474039	7:-76306029	MsaT038415.1:intron
TGTTCATCTGATCTTTGCAT+TGG	0.480317	7:+76311822	None:intergenic
GTAGTGACTGAATTGTTCAT+TGG	0.485579	7:-76305803	MsaT038415.1:CDS
GAGCGTTGTTCGAGCAAGAA+AGG	0.493144	7:-76307628	MsaT038415.1:intron
TTCATCCTTCAGGAAACTCA+TGG	0.510018	7:-76307718	MsaT038415.1:intron
AGCTTCTTGAAGCTTCGAAA+CGG	0.511522	7:-76307838	MsaT038415.1:intron
CCCTACTTGCTGAAAATGCC+AGG	0.512433	7:-76306042	MsaT038415.1:CDS
ATCAGATGAACAAAATATGC+AGG	0.516489	7:-76311811	MsaT038415.1:intron
AATTGACCAACTAAAAGAAA+AGG	0.524260	7:-76307496	MsaT038415.1:intron
TCAGTCACTACATCTGAGCT+TGG	0.537218	7:+76305815	None:intergenic
AACGCTACCGTAGGAATACC+AGG	0.549054	7:-76311854	MsaT038415.1:CDS
ACAACAGATAGAACAACAGT+TGG	0.558209	7:-76307661	MsaT038415.1:CDS
TTCAGGAAACTCATGGGAGA+AGG	0.558824	7:-76307711	MsaT038415.1:intron
ACAGCCACAGCCAACAACAA+AGG	0.562089	7:-76305879	MsaT038415.1:CDS
GGTATTATGTAACAGCATGC+AGG	0.567228	7:-76311886	MsaT038415.1:intron
GAGCACTCCTGGTATTCCTA+CGG	0.598631	7:+76311847	None:intergenic
TCATCCTTCAGGAAACTCAT+GGG	0.616544	7:-76307717	MsaT038415.1:intron
AATTGTTCATTGGACTACAC+AGG	0.619043	7:-76305793	MsaT038415.1:CDS
AAATTAATCAAAATGGTGAG+AGG	0.642503	7:-76323624	None:intergenic
ACACAATTGAACGCTACCGT+AGG	0.677549	7:-76311863	MsaT038415.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	76305784	76323634	76305784	ID=MsaG038415
Chr7	mRNA	76305784	76323634	76305784	ID=MsaT038415.1;Parent=MsaG038415
Chr7	exon	76305784	76305912	76305784	ID=MsaT038415.1.exon7;Parent=MsaT038415.1
Chr7	CDS	76305784	76305912	76305784	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76306030	76306071	76306030	ID=MsaT038415.1.exon6;Parent=MsaT038415.1
Chr7	CDS	76306030	76306071	76306030	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76307497	76307538	76307497	ID=MsaT038415.1.exon5;Parent=MsaT038415.1
Chr7	CDS	76307497	76307538	76307497	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76307629	76307728	76307629	ID=MsaT038415.1.exon4;Parent=MsaT038415.1
Chr7	CDS	76307629	76307728	76307629	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76307839	76307900	76307839	ID=MsaT038415.1.exon3;Parent=MsaT038415.1
Chr7	CDS	76307839	76307900	76307839	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76311812	76311893	76311812	ID=MsaT038415.1.exon2;Parent=MsaT038415.1
Chr7	CDS	76311812	76311893	76311812	ID=cds.MsaT038415.1;Parent=MsaT038415.1
Chr7	exon	76323453	76323634	76323453	ID=MsaT038415.1.exon1;Parent=MsaT038415.1
Chr7	CDS	76323453	76323634	76323453	ID=cds.MsaT038415.1;Parent=MsaT038415.1

Gene Sequence

>MsaT038415.1

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAATGCTACAAGCAGACAAGTGACATTCTCAAAAAGAAGAAATGGTTTGCTGAAGAAAGCATTTGAGCTATCTGTTCTCTGTGATGCTGAAGTTGCTCTTATCATCTTTTCTCCAAGAGGAAAACTTTATGAATTTTCAAGCTCCTGCATGCAGGACACAATTGAACGCTACCGTAGGAATACCAGGAGTGCTCAACCAATGCAAAGATCAGATGAACAAAATATGCAGAATTTGAAGCATGAAACAGCAAGTTTGATGAAGAAGATTGAGCTTCTTGAAGCTTCGAAACGGAAACTCATGGGAGAAGGTTTGGGATCATGCTCTTTGGAAGAACTACAACAGATAGAACAACAGTTGGAAAAGAGTGTGAGCGTTGTTCGAGCAAGAAAGAATCAGGCATACAAGAATCAAATTGACCAACTAAAAGAAAAGGAAAAAACCCTACTTGCTGAAAATGCCAGGCTCGCTAAGCAGCCACCACAGCCACAGCCACAGCCAACAACAAAGGATCATCAAAGAGAAAATCAACAACCCTATGCTGAAAGCAGTCCAAGCTCAGATGTAGTGACTGAATTGTTCATTGGACTACACAGGTCTTGTTGA

Protein sequence

>MsaT038415.1

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSCMQDTIERYRRNTRSAQPMQRSDEQNMQNLKHETASLMKKIELLEASKRKLMGEGLGSCSLEELQQIEQQLEKSVSVVRARKNQAYKNQIDQLKEKEKTLLAENARLAKQPPQPQPQPTTKDHQRENQQPYAESSPSSDVVTELFIGLHRSC*