AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG038682

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038682 MtrunA17_Chr7g0249311 77.071 676 92 8 119 735 1 672 0.0 1019
MsaG038682 MtrunA17_Chr7g0249301 83.594 384 25 3 194 545 1 378 0.0 626
MsaG038682 MtrunA17_Chr3g0079691 43.960 505 227 12 63 530 81 566 2.35e-115 363
MsaG038682 MtrunA17_Chr3g0079691 46.078 102 43 5 254 352 494 586 6.66e-15 78.6
MsaG038682 MtrunA17_Chr5g0445311 39.468 489 223 9 51 525 1 430 1.83e-92 298
MsaG038682 MtrunA17_Chr5g0445311 51.429 70 33 1 459 528 200 268 5.33e-13 72.4
MsaG038682 MtrunA17_Chr3g0101131 41.580 481 210 14 74 525 43 481 2.16e-92 300
MsaG038682 MtrunA17_Chr7g0218081 47.020 302 126 6 252 548 225 497 2.45e-77 258
MsaG038682 MtrunA17_Chr5g0432161 37.307 453 205 12 94 521 85 483 1.65e-74 252
MsaG038682 MtrunA17_Chr3g0106491 37.875 433 201 9 92 521 60 427 9.02e-74 248
MsaG038682 MtrunA17_Chr3g0106491 41.379 116 48 3 411 524 167 264 5.94e-15 78.2
MsaG038682 MtrunA17_Chr5g0418191 46.099 282 115 5 252 532 148 393 1.39e-69 234
MsaG038682 MtrunA17_Chr7g0243891 34.686 493 241 12 101 577 63 490 1.60e-69 238
MsaG038682 MtrunA17_Chr7g0263531 43.643 291 131 4 238 527 171 429 2.16e-66 226
MsaG038682 MtrunA17_Chr7g0263531 40.541 111 59 2 204 313 316 420 7.16e-16 80.9
MsaG038682 MtrunA17_Chr7g0263531 49.315 73 36 1 460 532 190 261 6.82e-14 74.7
MsaG038682 MtrunA17_Chr4g0004911 36.806 432 182 13 97 521 51 398 9.63e-66 226
MsaG038682 MtrunA17_Chr5g0447701 36.897 290 139 6 252 541 89 334 1.02e-48 176
MsaG038682 MtrunA17_Chr5g0447701 40.404 99 57 2 217 313 213 311 7.12e-14 74.3
MsaG038682 MtrunA17_Chr4g0074001 32.853 347 180 8 192 521 111 421 1.64e-47 176
MsaG038682 MtrunA17_Chr4g0042831 38.783 263 123 8 321 555 118 370 6.03e-42 157
MsaG038682 MtrunA17_Chr4g0042831 65.079 63 21 1 256 317 146 208 1.09e-20 95.1
MsaG038682 MtrunA17_Chr4g0042831 41.525 118 55 3 254 370 277 381 1.41e-15 79.3
MsaG038682 MtrunA17_Chr1g0188941 62.025 79 30 0 440 518 32 110 2.13e-29 112
MsaG038682 MtrunA17_Chr1g0188941 50.820 61 29 1 254 313 50 110 1.67e-13 67.4
MsaG038682 MtrunA17_Chr8g0335811 62.338 77 29 0 439 515 134 210 1.86e-28 114
MsaG038682 MtrunA17_Chr8g0335811 57.627 59 24 1 254 311 153 211 5.63e-15 75.1
MsaG038682 MtrunA17_Chr7g0249321 86.441 59 8 0 60 118 43 101 2.63e-28 109
MsaG038682 MtrunA17_Chr6g0485431 40.141 142 80 3 385 524 82 220 2.54e-25 108
MsaG038682 MtrunA17_Chr6g0485431 44.776 67 35 2 254 318 153 219 3.42e-12 68.9
MsaG038682 MtrunA17_Chr3g0129361 58.108 74 31 0 442 515 127 200 3.96e-25 104
MsaG038682 MtrunA17_Chr3g0129361 53.333 60 27 1 253 311 142 201 1.56e-14 73.6
MsaG038682 MtrunA17_Chr4g0051881 55.422 83 37 0 445 527 164 246 4.29e-25 107
MsaG038682 MtrunA17_Chr4g0051881 56.923 65 27 1 254 317 177 241 4.38e-16 80.5
MsaG038682 MtrunA17_Chr2g0294231 57.317 82 35 0 443 524 187 268 6.23e-25 107
MsaG038682 MtrunA17_Chr2g0294231 55.385 65 28 1 254 317 202 266 9.64e-16 79.7
MsaG038682 MtrunA17_Chr5g0443131 57.500 80 34 0 445 524 143 222 8.88e-25 105
MsaG038682 MtrunA17_Chr5g0443131 56.923 65 27 1 254 317 156 220 1.41e-15 78.6
MsaG038682 MtrunA17_Chr1g0150801 58.571 70 29 0 446 515 89 158 1.33e-24 100
MsaG038682 MtrunA17_Chr1g0150801 31.646 158 67 6 194 310 1 158 2.05e-11 63.2
MsaG038682 MtrunA17_Chr8g0383251 53.425 73 34 0 446 518 95 167 2.43e-24 100
MsaG038682 MtrunA17_Chr8g0383251 46.250 80 41 2 239 316 91 170 5.15e-12 65.5
MsaG038682 MtrunA17_Chr7g0270191 57.895 76 32 0 443 518 129 204 3.33e-24 103
MsaG038682 MtrunA17_Chr7g0270191 53.623 69 31 1 254 321 144 212 1.55e-15 78.2
MsaG038682 MtrunA17_Chr3g0129321 36.538 156 89 3 365 519 32 178 4.40e-24 100
MsaG038682 MtrunA17_Chr3g0129321 50.000 66 32 1 252 316 115 180 2.49e-13 69.7
MsaG038682 MtrunA17_Chr5g0418781 56.579 76 33 0 440 515 105 180 1.03e-23 101
MsaG038682 MtrunA17_Chr5g0418781 53.623 69 31 1 254 321 123 191 2.01e-15 77.4
MsaG038682 MtrunA17_Chr8g0383351 57.333 75 31 1 442 515 142 216 1.33e-23 100
MsaG038682 MtrunA17_Chr8g0383351 49.231 65 32 1 248 311 153 217 6.57e-15 75.1
MsaG038682 MtrunA17_Chr1g0194481 55.844 77 34 0 443 519 142 218 2.03e-23 102
MsaG038682 MtrunA17_Chr1g0194481 55.385 65 28 1 254 317 157 221 1.52e-16 81.6
MsaG038682 MtrunA17_Chr7g0224801 55.405 74 33 0 450 523 84 157 2.68e-23 97.4
MsaG038682 MtrunA17_Chr7g0224801 45.312 64 34 1 254 316 92 155 6.38e-13 67.8
MsaG038682 MtrunA17_Chr7g0270831 42.500 120 60 4 416 533 180 292 6.33e-23 102
MsaG038682 MtrunA17_Chr7g0270831 47.692 65 32 2 251 313 212 276 9.05e-12 67.8
MsaG038682 MtrunA17_Chr4g0068541 55.844 77 34 0 443 519 192 268 1.47e-22 101
MsaG038682 MtrunA17_Chr4g0068541 45.263 95 46 3 254 342 207 301 1.35e-14 76.6
MsaG038682 MtrunA17_Chr8g0386241 52.564 78 37 0 440 517 84 161 1.86e-22 95.5
MsaG038682 MtrunA17_Chr8g0386241 35.088 114 52 3 238 334 70 178 4.66e-13 68.2
MsaG038682 MtrunA17_Chr1g0189391 57.746 71 29 1 446 515 84 154 1.89e-22 99.4
MsaG038682 MtrunA17_Chr1g0189391 40.964 83 40 3 231 311 80 155 3.07e-11 65.5
MsaG038682 MtrunA17_Chr7g0248721 46.602 103 54 1 413 515 95 196 2.14e-21 93.6
MsaG038682 MtrunA17_Chr7g0248721 56.897 58 23 2 254 310 140 196 7.63e-13 68.6
MsaG038682 MtrunA17_Chr2g0288871 52.564 78 36 1 442 518 288 365 2.56e-21 98.6
MsaG038682 MtrunA17_Chr2g0288871 47.692 65 32 2 251 313 301 365 1.79e-11 67.4
MsaG038682 MtrunA17_Chr2g0322391 44.068 118 56 3 442 549 332 449 2.66e-21 99.0
MsaG038682 MtrunA17_Chr4g0075201 51.250 80 38 1 442 520 250 329 2.74e-21 98.2
MsaG038682 MtrunA17_Chr3g0099641 50.000 78 38 1 442 518 234 311 5.29e-21 97.1
MsaG038682 MtrunA17_Chr3g0099641 44.928 69 36 2 251 317 247 315 5.71e-12 68.6
MsaG038682 MtrunA17_Chr4g0051181 50.633 79 38 1 443 520 227 305 7.35e-21 96.7
MsaG038682 MtrunA17_Chr4g0060271 50.649 77 37 1 443 518 239 315 1.03e-20 97.1
MsaG038682 MtrunA17_Chr4g0060271 49.206 63 30 2 253 313 253 315 4.04e-11 66.2
MsaG038682 MtrunA17_Chr4g0025061 46.154 91 48 1 441 530 342 432 1.87e-20 96.3
MsaG038682 MtrunA17_Chr2g0302391 40.441 136 70 5 433 566 185 311 3.43e-20 94.0
MsaG038682 MtrunA17_Chr4g0053281 47.778 90 43 2 436 524 246 332 5.29e-20 92.0
MsaG038682 MtrunA17_Chr4g0053281 51.724 58 26 2 256 311 267 324 8.24e-12 67.4
MsaG038682 MtrunA17_Chr1g0147881 47.191 89 43 2 439 526 245 330 6.55e-20 92.0
MsaG038682 MtrunA17_Chr1g0147881 54.386 57 24 2 256 310 263 319 8.59e-12 67.4
MsaG038682 MtrunA17_Chr7g0216891 46.429 84 41 2 433 515 196 276 9.19e-20 94.0
MsaG038682 MtrunA17_Chr5g0432071 60.317 63 25 0 256 318 105 167 1.59e-19 87.8
MsaG038682 MtrunA17_Chr5g0432071 48.571 70 35 1 459 528 104 172 3.08e-14 72.4
MsaG038682 MtrunA17_Chr5g0447711 45.882 85 46 0 445 529 216 300 3.84e-19 89.0
MsaG038682 MtrunA17_Chr5g0447711 48.387 62 32 0 255 316 83 144 1.29e-13 72.4
MsaG038682 MtrunA17_Chr5g0401821 50.000 86 42 1 440 524 180 265 8.88e-19 87.0
MsaG038682 MtrunA17_Chr5g0401821 53.448 58 25 2 256 311 200 257 1.12e-11 66.2
MsaG038682 MtrunA17_Chr4g0025051 46.512 86 45 1 446 530 322 407 1.89e-18 89.7
MsaG038682 MtrunA17_Chr3g0136961 48.684 76 36 2 443 515 120 195 9.92e-18 84.7
MsaG038682 MtrunA17_Chr3g0136961 48.333 60 29 2 254 311 137 196 1.97e-11 65.9
MsaG038682 MtrunA17_Chr2g0333851 44.681 94 50 2 427 519 138 230 1.03e-17 84.7
MsaG038682 MtrunA17_Chr2g0333851 46.774 62 31 2 254 313 168 229 6.94e-11 64.3
MsaG038682 MtrunA17_Chr4g0071521 42.727 110 51 3 407 515 204 302 2.08e-17 84.0
MsaG038682 MtrunA17_Chr4g0071521 37.778 90 46 3 233 312 215 304 5.92e-12 67.4
MsaG038682 MtrunA17_Chr1g0184691 49.398 83 37 3 439 519 276 355 5.33e-17 83.6
MsaG038682 MtrunA17_Chr1g0184691 54.237 59 25 2 256 312 294 352 1.90e-11 66.6
MsaG038682 MtrunA17_Chr7g0238921 57.895 57 24 0 459 515 124 180 7.05e-17 82.4
MsaG038682 MtrunA17_Chr7g0238921 53.571 56 25 1 256 310 125 180 7.80e-11 64.3
MsaG038682 MtrunA17_Chr1g0150281 44.048 84 41 3 438 515 114 197 4.93e-16 79.3
MsaG038682 MtrunA17_Chr2g0293481 38.525 122 68 2 424 544 238 353 6.44e-16 81.3
MsaG038682 MtrunA17_Chr2g0293481 47.561 82 39 3 246 323 258 339 1.29e-12 70.9
MsaG038682 MtrunA17_Chr2g0284321 46.237 93 42 4 256 341 36 127 1.09e-15 76.6
MsaG038682 MtrunA17_Chr2g0284321 50.000 74 31 2 460 527 36 109 1.17e-14 73.9
MsaG038682 MtrunA17_Chr2g0319961 33.582 134 69 5 460 579 81 208 1.26e-15 77.8
MsaG038682 MtrunA17_Chr2g0319961 51.667 60 27 2 256 313 81 140 5.32e-11 63.9
MsaG038682 MtrunA17_Chr8g0387501 47.368 76 39 1 457 531 127 202 1.49e-15 77.8
MsaG038682 MtrunA17_Chr8g0387501 48.649 74 34 3 253 324 127 198 1.01e-14 75.1
MsaG038682 MtrunA17_Chr4g0001361 45.000 80 35 2 457 527 160 239 1.71e-15 78.2
MsaG038682 MtrunA17_Chr4g0001361 40.230 87 40 3 254 328 161 247 1.73e-11 66.2
MsaG038682 MtrunA17_Chr1g0150271 46.032 63 33 1 457 518 99 161 1.74e-15 77.0
MsaG038682 MtrunA17_Chr1g0202461 40.426 94 51 3 433 522 233 325 3.29e-15 78.2
MsaG038682 MtrunA17_Chr1g0202461 46.591 88 42 4 239 321 244 331 5.60e-15 77.4
MsaG038682 MtrunA17_Chr4g0024391 40.698 86 50 1 446 530 216 301 4.57e-15 78.6
MsaG038682 MtrunA17_Chr8g0348311 43.478 92 47 3 439 528 137 225 7.56e-15 76.6
MsaG038682 MtrunA17_Chr8g0348311 39.216 102 48 4 234 321 124 225 2.73e-12 68.9
MsaG038682 MtrunA17_Chr3g0139021 35.938 128 60 5 398 523 273 380 1.05e-14 77.0
MsaG038682 MtrunA17_Chr7g0270051 50.000 62 30 1 460 520 54 115 1.50e-14 74.7
MsaG038682 MtrunA17_Chr7g0270051 50.000 60 28 2 256 313 54 113 7.91e-12 66.6
MsaG038682 MtrunA17_Chr8g0379461 44.928 69 37 1 460 527 77 145 1.84e-14 73.9
MsaG038682 MtrunA17_Chr8g0379461 54.839 62 26 2 256 315 77 138 2.44e-13 70.5
MsaG038682 MtrunA17_Chr2g0289181 49.231 65 32 1 460 523 15 79 3.44e-14 72.8
MsaG038682 MtrunA17_Chr2g0289181 48.684 76 37 2 255 328 14 89 3.67e-14 72.8
MsaG038682 MtrunA17_Chr7g0228941 45.833 72 38 1 446 516 39 110 4.81e-14 69.3
MsaG038682 MtrunA17_Chr7g0228941 47.368 57 28 2 256 310 53 109 4.88e-11 60.8
MsaG038682 MtrunA17_Chr6g0468181 53.333 60 28 0 265 324 12 71 7.32e-14 68.6
MsaG038682 MtrunA17_Chr7g0248691 44.000 75 41 1 460 533 155 229 1.27e-13 72.8
MsaG038682 MtrunA17_Chr7g0248691 30.675 163 78 5 256 411 155 289 8.58e-11 64.3
MsaG038682 MtrunA17_Chr1g0188961 58.000 50 21 0 479 528 3 52 8.43e-13 63.9
MsaG038682 MtrunA17_Chr8g0387981 53.448 58 23 2 255 308 132 189 1.24e-12 70.1
MsaG038682 MtrunA17_Chr5g0419241 54.348 46 21 0 442 487 60 105 3.28e-12 63.5
MsaG038682 MtrunA17_Chr3g0126391 52.542 59 24 2 254 308 132 190 4.14e-12 68.2
MsaG038682 MtrunA17_Chr3g0126391 35.897 117 50 4 410 513 86 190 1.56e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038682 AT5G56270.1 40.858 536 254 17 31 521 32 549 1.24e-97 317
MsaG038682 AT4G26440.1 52.347 277 120 4 256 531 179 444 8.70e-82 271
MsaG038682 AT4G26440.1 55.000 60 26 1 459 518 178 236 1.27e-12 71.6
MsaG038682 AT4G26440.1 30.723 166 100 4 162 313 267 431 1.85e-12 70.9
MsaG038682 AT4G26640.2 38.013 463 223 11 77 525 36 448 8.96e-80 266
MsaG038682 AT4G26640.2 48.649 74 37 1 457 530 209 281 2.55e-13 73.9
MsaG038682 AT4G26640.7 38.293 457 218 11 83 525 2 408 3.02e-79 263
MsaG038682 AT4G26640.7 48.649 74 37 1 457 530 169 241 2.36e-13 73.6
MsaG038682 AT4G26640.5 47.761 268 102 5 256 521 36 267 2.82e-70 235
MsaG038682 AT4G26640.5 48.649 74 37 1 457 530 33 105 3.06e-13 72.8
MsaG038682 AT4G26640.6 47.761 268 102 5 256 521 36 267 2.82e-70 235
MsaG038682 AT4G26640.6 48.649 74 37 1 457 530 33 105 3.06e-13 72.8
MsaG038682 AT4G26640.4 47.761 268 102 5 256 521 36 267 2.82e-70 235
MsaG038682 AT4G26640.4 48.649 74 37 1 457 530 33 105 3.06e-13 72.8
MsaG038682 AT4G26640.3 47.761 268 102 5 256 521 36 267 2.82e-70 235
MsaG038682 AT4G26640.3 48.649 74 37 1 457 530 33 105 3.06e-13 72.8
MsaG038682 AT4G26640.1 47.619 273 104 6 256 525 140 376 3.69e-70 238
MsaG038682 AT4G26640.1 48.649 74 37 1 457 530 137 209 2.82e-13 73.6
MsaG038682 AT2G38470.1 47.331 281 112 5 255 530 184 433 2.53e-67 231
MsaG038682 AT2G38470.1 58.824 68 25 2 254 320 361 426 4.17e-14 76.3
MsaG038682 AT2G03340.1 37.310 461 187 16 95 538 127 502 5.82e-67 230
MsaG038682 AT1G13960.1 34.906 424 197 8 95 518 124 468 2.28e-66 228
MsaG038682 AT1G13960.2 44.195 267 125 4 252 518 73 315 4.97e-65 220
MsaG038682 AT2G04880.1 36.806 288 146 6 252 525 108 373 4.24e-53 191
MsaG038682 AT2G04880.1 44.898 98 49 3 254 346 306 403 6.98e-15 78.6
MsaG038682 AT2G04880.2 38.043 276 135 6 252 525 108 349 5.98e-53 190
MsaG038682 AT2G37260.2 40.860 279 135 7 244 517 72 325 3.57e-52 185
MsaG038682 AT2G37260.2 52.857 70 32 1 460 529 84 152 2.86e-13 72.4
MsaG038682 AT2G37260.3 40.860 279 135 7 244 517 74 327 3.64e-52 185
MsaG038682 AT2G37260.3 52.857 70 32 1 460 529 86 154 2.76e-13 72.4
MsaG038682 AT2G37260.1 40.217 276 141 5 244 517 154 407 5.08e-52 187
MsaG038682 AT2G37260.1 52.857 70 32 1 460 529 166 234 2.68e-13 73.2
MsaG038682 AT5G07100.2 54.615 130 42 3 392 521 91 203 1.05e-38 143
MsaG038682 AT5G07100.2 47.664 107 50 2 252 357 21 122 2.06e-22 96.7
MsaG038682 AT5G07100.2 45.570 79 41 1 459 537 24 100 3.89e-15 75.5
MsaG038682 AT5G07100.2 55.072 69 29 2 254 321 140 207 3.91e-13 69.7
MsaG038682 AT5G07100.4 54.615 130 42 3 392 521 91 203 1.05e-38 143
MsaG038682 AT5G07100.4 47.664 107 50 2 252 357 21 122 2.06e-22 96.7
MsaG038682 AT5G07100.4 45.570 79 41 1 459 537 24 100 3.89e-15 75.5
MsaG038682 AT5G07100.4 55.072 69 29 2 254 321 140 207 3.91e-13 69.7
MsaG038682 AT5G07100.5 54.615 130 42 3 392 521 91 203 1.05e-38 143
MsaG038682 AT5G07100.5 47.664 107 50 2 252 357 21 122 2.06e-22 96.7
MsaG038682 AT5G07100.5 45.570 79 41 1 459 537 24 100 3.89e-15 75.5
MsaG038682 AT5G07100.5 55.072 69 29 2 254 321 140 207 3.91e-13 69.7
MsaG038682 AT5G07100.3 54.615 130 42 3 392 521 91 203 1.05e-38 143
MsaG038682 AT5G07100.3 47.664 107 50 2 252 357 21 122 2.06e-22 96.7
MsaG038682 AT5G07100.3 45.570 79 41 1 459 537 24 100 3.89e-15 75.5
MsaG038682 AT5G07100.3 55.072 69 29 2 254 321 140 207 3.91e-13 69.7
MsaG038682 AT5G07100.1 54.615 130 42 3 392 521 184 296 2.85e-38 145
MsaG038682 AT5G07100.1 44.628 121 59 3 252 371 114 227 8.48e-23 100
MsaG038682 AT5G07100.1 45.570 79 41 1 459 537 117 193 4.99e-15 77.0
MsaG038682 AT5G07100.1 55.072 69 29 2 254 321 233 300 1.41e-13 72.8
MsaG038682 AT4G12020.2 38.095 231 106 5 252 479 465 661 2.95e-35 145
MsaG038682 AT4G12020.2 50.820 61 29 1 458 518 467 526 5.86e-11 67.0
MsaG038682 AT4G12020.7 38.095 231 106 5 252 479 465 661 2.98e-35 144
MsaG038682 AT4G12020.7 50.820 61 29 1 458 518 467 526 6.21e-11 67.0
MsaG038682 AT4G12020.10 38.095 231 106 5 252 479 465 661 2.98e-35 145
MsaG038682 AT4G12020.10 50.820 61 29 1 458 518 467 526 5.70e-11 67.0
MsaG038682 AT4G12020.3 38.095 231 106 5 252 479 465 661 3.01e-35 144
MsaG038682 AT4G12020.3 50.820 61 29 1 458 518 467 526 5.80e-11 67.0
MsaG038682 AT4G12020.1 38.095 231 106 5 252 479 465 661 3.15e-35 144
MsaG038682 AT4G12020.1 50.820 61 29 1 458 518 467 526 6.27e-11 66.6
MsaG038682 AT4G12020.9 38.095 231 106 5 252 479 465 661 3.15e-35 144
MsaG038682 AT4G12020.9 50.820 61 29 1 458 518 467 526 6.27e-11 66.6
MsaG038682 AT4G12020.6 38.095 231 106 5 252 479 465 661 3.26e-35 144
MsaG038682 AT4G12020.6 50.820 61 29 1 458 518 467 526 6.15e-11 67.0
MsaG038682 AT4G12020.8 38.095 231 106 5 252 479 465 661 3.26e-35 144
MsaG038682 AT4G12020.8 50.820 61 29 1 458 518 467 526 6.15e-11 67.0
MsaG038682 AT4G12020.4 38.095 231 106 5 252 479 465 661 3.39e-35 144
MsaG038682 AT4G12020.4 50.820 61 29 1 458 518 467 526 6.16e-11 67.0
MsaG038682 AT4G12020.5 38.095 231 106 5 252 479 398 594 3.84e-35 144
MsaG038682 AT4G12020.5 50.820 61 29 1 458 518 400 459 6.67e-11 66.6
MsaG038682 AT4G12020.11 38.095 231 106 5 252 479 465 661 7.85e-35 143
MsaG038682 AT4G12020.11 50.820 61 29 1 458 518 467 526 8.89e-11 66.2
MsaG038682 AT3G01080.1 73.418 79 21 0 440 518 287 365 1.08e-34 137
MsaG038682 AT3G01080.1 55.294 85 38 0 252 336 164 248 7.42e-24 105
MsaG038682 AT3G01080.1 50.000 74 36 1 459 532 167 239 8.27e-15 77.8
MsaG038682 AT3G01080.1 60.656 61 23 1 254 313 305 365 1.35e-14 77.0
MsaG038682 AT3G01080.2 73.418 79 21 0 440 518 325 403 1.19e-34 138
MsaG038682 AT3G01080.2 55.294 85 38 0 252 336 202 286 4.98e-24 106
MsaG038682 AT3G01080.2 50.000 74 36 1 459 532 205 277 7.90e-15 78.2
MsaG038682 AT3G01080.2 60.656 61 23 1 254 313 343 403 9.26e-15 77.8
MsaG038682 AT2G30250.1 66.667 81 27 0 440 520 309 389 5.05e-32 129
MsaG038682 AT2G30250.1 58.333 72 27 1 256 324 167 238 1.47e-18 89.0
MsaG038682 AT2G30250.1 53.731 67 30 1 253 318 326 392 4.16e-13 72.4
MsaG038682 AT2G30250.1 46.835 79 36 2 440 518 152 224 5.57e-12 68.9
MsaG038682 AT2G44745.1 62.338 77 29 0 439 515 125 201 1.18e-28 114
MsaG038682 AT2G44745.1 49.351 77 28 2 253 328 143 209 6.69e-15 75.1
MsaG038682 AT1G55600.1 60.440 91 35 1 431 520 278 368 1.53e-28 120
MsaG038682 AT1G55600.1 55.000 60 24 2 256 313 308 366 2.75e-13 73.6
MsaG038682 AT4G30935.1 45.113 133 50 2 407 532 288 404 1.30e-26 114
MsaG038682 AT4G30935.1 50.000 70 34 1 256 324 332 401 1.48e-13 74.3
MsaG038682 AT4G30935.1 50.794 63 29 2 255 316 168 229 3.72e-12 69.7
MsaG038682 AT1G69310.4 48.148 108 55 1 411 517 98 205 3.97e-26 109
MsaG038682 AT1G69310.4 58.621 58 23 1 254 310 146 203 8.71e-15 76.3
MsaG038682 AT1G69310.2 48.148 108 55 1 411 517 98 205 3.97e-26 109
MsaG038682 AT1G69310.2 58.621 58 23 1 254 310 146 203 8.71e-15 76.3
MsaG038682 AT1G69310.1 48.148 108 55 1 411 517 98 205 3.97e-26 109
MsaG038682 AT1G69310.1 58.621 58 23 1 254 310 146 203 8.71e-15 76.3
MsaG038682 AT4G39410.1 53.488 86 40 0 430 515 194 279 2.87e-25 107
MsaG038682 AT4G39410.1 52.381 63 27 2 251 311 219 280 1.09e-12 70.1
MsaG038682 AT3G01080.3 55.294 85 38 0 252 336 202 286 3.04e-25 107
MsaG038682 AT3G01080.3 50.000 74 36 1 459 532 205 277 1.53e-15 79.0
MsaG038682 AT4G18170.1 46.364 110 49 1 420 519 123 232 4.01e-25 107
MsaG038682 AT4G18170.1 55.385 65 28 1 254 317 171 235 3.32e-15 77.8
MsaG038682 AT5G64810.1 60.563 71 28 0 446 516 97 167 8.54e-25 102
MsaG038682 AT5G49520.1 60.526 76 30 0 443 518 205 280 1.47e-24 107
MsaG038682 AT5G49520.1 55.385 65 28 1 254 317 220 284 7.71e-15 77.8
MsaG038682 AT3G01970.1 56.250 80 35 0 446 525 52 131 1.73e-24 100
MsaG038682 AT3G01970.1 52.542 59 27 1 254 311 64 122 1.75e-13 68.9
MsaG038682 AT1G29860.1 38.415 164 91 3 443 606 120 273 1.74e-24 104
MsaG038682 AT1G29860.1 57.971 69 27 2 254 321 135 202 2.89e-16 80.5
MsaG038682 AT5G41570.1 57.143 77 33 0 439 515 78 154 2.10e-24 101
MsaG038682 AT5G41570.1 50.847 59 28 1 253 310 96 154 6.35e-13 68.2
MsaG038682 AT5G13080.1 53.846 78 36 0 446 523 54 131 6.10e-24 99.0
MsaG038682 AT5G13080.1 46.875 64 33 1 254 316 66 129 1.39e-12 66.2
MsaG038682 AT1G64000.1 55.844 77 34 0 439 515 94 170 1.60e-23 99.4
MsaG038682 AT1G64000.1 50.847 59 28 1 253 310 112 170 3.36e-13 69.3
MsaG038682 AT5G46350.1 54.545 77 35 0 445 521 169 245 2.65e-23 102
MsaG038682 AT5G46350.1 53.846 65 29 1 254 317 182 246 5.97e-15 77.0
MsaG038682 AT4G04450.2 46.465 99 52 1 433 530 172 270 3.42e-23 103
MsaG038682 AT4G04450.2 49.231 65 31 2 251 313 194 258 9.13e-12 68.6
MsaG038682 AT5G26170.1 55.714 70 31 0 446 515 100 169 3.75e-23 97.4
MsaG038682 AT5G26170.1 50.000 62 30 1 251 311 109 170 3.63e-13 68.9
MsaG038682 AT2G46130.1 55.263 76 34 0 440 515 11 86 4.34e-23 95.1
MsaG038682 AT2G46130.1 57.143 63 26 1 249 310 24 86 1.22e-16 76.6
MsaG038682 AT2G47260.1 56.579 76 33 0 443 518 158 233 1.26e-22 100
MsaG038682 AT2G47260.1 53.846 65 29 1 254 317 173 237 2.06e-15 78.6
MsaG038682 AT4G04450.1 46.078 102 54 1 430 530 263 364 1.42e-22 102
MsaG038682 AT4G04450.1 49.231 65 31 2 251 313 288 352 2.30e-11 67.4
MsaG038682 AT5G15130.2 45.556 90 48 1 442 530 168 257 9.62e-22 100
MsaG038682 AT5G15130.1 45.556 90 48 1 442 530 210 299 1.05e-21 100
MsaG038682 AT1G18860.1 47.619 84 43 1 436 518 216 299 1.28e-21 99.8
MsaG038682 AT1G69310.3 45.370 108 54 2 411 517 98 201 1.41e-21 95.9
MsaG038682 AT4G22070.4 52.564 78 36 1 442 518 280 357 3.50e-21 98.6
MsaG038682 AT4G22070.4 47.692 65 32 2 251 313 293 357 2.65e-11 67.4
MsaG038682 AT4G22070.3 52.564 78 36 1 442 518 280 357 3.50e-21 98.6
MsaG038682 AT4G22070.3 47.692 65 32 2 251 313 293 357 2.65e-11 67.4
MsaG038682 AT4G22070.2 52.564 78 36 1 442 518 280 357 3.50e-21 98.6
MsaG038682 AT4G22070.2 47.692 65 32 2 251 313 293 357 2.65e-11 67.4
MsaG038682 AT4G22070.1 52.564 78 36 1 442 518 280 357 3.50e-21 98.6
MsaG038682 AT4G22070.1 47.692 65 32 2 251 313 293 357 2.65e-11 67.4
MsaG038682 AT2G21900.1 51.316 76 34 1 448 520 95 170 4.21e-21 92.4
MsaG038682 AT2G21900.1 47.541 61 31 1 254 313 108 168 2.97e-12 67.0
MsaG038682 AT1G62300.1 52.564 78 36 1 442 518 295 372 4.56e-21 98.2
MsaG038682 AT1G62300.1 47.692 65 32 2 251 313 308 372 2.96e-11 67.0
MsaG038682 AT1G68150.1 50.633 79 38 1 443 520 219 297 7.17e-21 95.9
MsaG038682 AT4G01720.1 54.545 77 34 1 443 518 223 299 9.06e-21 96.7
MsaG038682 AT4G01720.1 49.231 65 31 2 251 313 235 299 1.18e-11 68.2
MsaG038682 AT3G62340.1 47.191 89 47 0 443 531 102 190 6.88e-20 90.9
MsaG038682 AT3G62340.1 47.436 78 38 2 254 328 117 194 5.11e-13 70.5
MsaG038682 AT2G23320.1 52.500 80 34 2 439 517 223 299 1.60e-19 90.9
MsaG038682 AT2G23320.1 55.172 58 24 2 256 311 241 298 3.87e-12 68.6
MsaG038682 AT1G80840.1 38.596 114 64 3 413 525 105 213 8.32e-19 88.2
MsaG038682 AT1G80840.1 46.032 63 32 2 253 313 144 206 4.32e-11 65.1
MsaG038682 AT2G46130.2 51.316 76 33 1 440 515 11 82 1.31e-18 82.0
MsaG038682 AT2G46130.2 52.381 63 25 2 249 310 24 82 3.47e-12 63.9
MsaG038682 AT4G24240.1 51.250 80 35 2 439 517 264 340 1.32e-18 88.6
MsaG038682 AT4G24240.1 55.172 58 24 2 256 311 282 339 1.20e-12 70.5
MsaG038682 AT4G23550.1 43.269 104 48 3 446 548 128 221 2.17e-18 87.0
MsaG038682 AT4G23550.1 49.315 73 33 3 254 324 139 209 1.82e-12 69.3
MsaG038682 AT4G31550.2 44.000 100 52 2 439 537 228 324 5.51e-18 86.3
MsaG038682 AT4G31550.1 44.000 100 52 2 439 537 229 325 5.75e-18 86.3
MsaG038682 AT2G25000.2 38.835 103 55 3 432 532 75 171 7.27e-18 84.0
MsaG038682 AT2G25000.2 40.860 93 51 3 253 341 101 193 6.43e-12 66.6
MsaG038682 AT2G25000.4 38.835 103 55 3 432 532 75 171 7.27e-18 84.0
MsaG038682 AT2G25000.4 40.860 93 51 3 253 341 101 193 6.43e-12 66.6
MsaG038682 AT5G28650.1 50.000 78 35 2 439 515 245 319 7.52e-18 85.9
MsaG038682 AT2G25000.3 38.835 103 55 3 432 532 97 193 1.05e-17 84.0
MsaG038682 AT2G25000.3 40.860 93 51 3 253 341 123 215 8.30e-12 66.6
MsaG038682 AT2G25000.1 38.835 103 55 3 432 532 118 214 1.84e-17 83.6
MsaG038682 AT2G25000.1 40.860 93 51 3 253 341 144 236 1.33e-11 66.2
MsaG038682 AT3G04670.1 50.000 78 35 2 439 515 245 319 2.30e-17 84.3
MsaG038682 AT3G04670.1 51.562 64 29 2 256 317 263 326 6.75e-11 65.1
MsaG038682 AT2G24570.1 51.282 78 34 2 439 515 226 300 3.14e-17 84.0
MsaG038682 AT2G24570.1 38.835 103 53 4 218 310 198 300 9.20e-11 64.3
MsaG038682 AT2G30590.1 51.282 78 34 2 439 515 296 370 3.60e-17 84.7
MsaG038682 AT2G30590.1 52.542 59 26 2 256 312 314 372 6.39e-11 65.5
MsaG038682 AT4G31800.2 34.400 125 78 3 457 580 109 230 4.71e-16 79.0
MsaG038682 AT5G43290.1 55.932 59 26 0 457 515 112 170 8.69e-16 79.0
MsaG038682 AT5G43290.1 39.394 99 54 2 256 348 115 213 2.20e-11 65.9
MsaG038682 AT4G31800.1 34.400 125 78 3 457 580 174 295 1.07e-15 79.3
MsaG038682 AT1G69810.2 41.304 92 52 2 441 530 127 218 1.53e-15 79.0
MsaG038682 AT1G69810.1 41.304 92 52 2 441 530 185 276 2.04e-15 79.3
MsaG038682 AT2G34830.1 42.000 100 51 2 424 522 186 279 2.96e-15 79.3
MsaG038682 AT2G34830.1 50.000 70 33 2 246 313 206 275 5.40e-13 72.0
MsaG038682 AT2G34830.2 42.000 100 51 2 424 522 195 288 3.20e-15 79.3
MsaG038682 AT2G34830.2 50.000 70 33 2 246 313 215 284 5.43e-13 72.4
MsaG038682 AT4G01250.1 45.977 87 42 3 439 523 110 193 3.78e-15 77.4
MsaG038682 AT4G01250.1 42.353 85 45 3 241 321 114 198 2.84e-12 68.6
MsaG038682 AT1G30650.1 42.000 100 51 2 424 522 188 281 3.86e-15 79.0
MsaG038682 AT1G30650.1 48.571 70 34 2 246 313 208 277 1.40e-12 70.9
MsaG038682 AT3G58710.2 33.553 152 92 4 391 537 2 149 7.00e-15 75.9
MsaG038682 AT3G58710.2 55.556 63 26 2 256 316 71 133 5.88e-12 67.4
MsaG038682 AT3G58710.1 33.553 152 93 4 391 537 2 150 7.30e-15 75.9
MsaG038682 AT3G58710.1 55.556 63 26 2 256 316 72 134 5.79e-12 67.4
MsaG038682 AT5G52830.1 43.182 88 48 2 460 546 166 252 1.61e-14 76.3
MsaG038682 AT5G52830.1 51.429 70 30 3 256 321 166 235 1.39e-12 70.1
MsaG038682 AT1G29280.1 51.667 60 28 1 460 518 75 134 7.93e-14 72.8
MsaG038682 AT1G29280.1 47.059 85 40 4 237 316 53 137 9.50e-13 69.3
MsaG038682 AT5G24110.1 33.333 126 71 4 392 513 54 170 2.81e-12 68.9
MsaG038682 AT5G24110.1 40.698 86 37 4 237 308 85 170 4.69e-11 65.1
MsaG038682 AT5G45050.4 50.000 64 31 1 460 522 1042 1105 3.17e-12 70.9
MsaG038682 AT5G45050.1 50.000 64 31 1 460 522 1181 1244 3.38e-12 70.9
MsaG038682 AT5G45050.2 50.000 64 31 1 460 522 1153 1216 3.42e-12 70.9
MsaG038682 AT1G66560.1 43.056 72 38 1 459 527 103 174 1.97e-11 65.5
MsaG038682 AT1G80590.1 38.372 86 50 1 460 542 86 171 2.23e-11 65.1

Find 182 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATCCAGTCTTACCTTTC+AGG 0.139495 7:-79479264 MsaT038682.1:CDS
GTTGGACGAGTTTCAGAATT+TGG 0.150372 7:+79479597 None:intergenic
TCTCTTTCTGTTCTGCTTCT+AGG 0.173610 7:+79480929 None:intergenic
CCGAGTTCGCAACTGATTTC+AGG 0.185570 7:+79486574 None:intergenic
TTGCATGACACTTTGATAAA+TGG 0.214965 7:+79479044 None:intergenic
TATGGATACTGGATTCTTAA+AGG 0.241059 7:-79479226 MsaT038682.1:CDS
CATAGCTATACCTGAGAATT+AGG 0.247007 7:+79484044 None:intergenic
TTGAATAACATCATACCTTA+TGG 0.271952 7:-79479447 MsaT038682.1:CDS
TTCAGTAATGATATGAAGTT+TGG 0.285295 7:-79479504 MsaT038682.1:CDS
CCTTACAGGATGGTTATAAT+TGG 0.296849 7:-79480882 MsaT038682.1:CDS
GGTGGTGGCATTTGAAATTC+AGG 0.300923 7:+79479360 None:intergenic
TAAAGACTCAACATCAAAAT+TGG 0.304540 7:+79483124 None:intergenic
TCAGTTGCGAACTCGGAAAA+TGG 0.307262 7:-79486567 MsaT038682.1:CDS
AGGGCAGCAGTTGAGGGATA+TGG 0.308113 7:-79479244 MsaT038682.1:CDS
CGATTCTGAGTCGGAATCTT+CGG 0.317084 7:+79480393 None:intergenic
GGTTATCGCTGGCGAAAGTA+TGG 0.322826 7:-79480163 MsaT038682.1:CDS
GGTTATAATTGGAGGAAATA+TGG 0.325818 7:-79480871 MsaT038682.1:CDS
AACACAGGACTTGTTCGTTT+TGG 0.332700 7:-79484167 MsaT038682.1:CDS
CAATATGACTACCTTGGGTT+TGG 0.333947 7:+79480118 None:intergenic
TTCTGATGTGACCAAGCTTT+CGG 0.344467 7:-79480548 MsaT038682.1:CDS
AATGTTTCCCCGTGTTTCAT+TGG 0.347210 7:+79480642 None:intergenic
GATGTCCTTTCTTGATCATC+AGG 0.351359 7:+79480577 None:intergenic
TAATTGTCAGGTCAGGAAAA+AGG 0.361390 7:-79480791 MsaT038682.1:CDS
TTGGACGAGTTTCAGAATTT+GGG 0.368780 7:+79479598 None:intergenic
AGGAAATCATTGCTAAAATC+AGG 0.369394 7:+79479549 None:intergenic
CGAGGCACCATTGTTTCAAC+CGG 0.375364 7:+79480250 None:intergenic
ACATAAGAGAAATTATTTAC+AGG 0.376689 7:-79480747 MsaT038682.1:CDS
TGATCATCAGGCTTCCATTC+CGG 0.380639 7:+79480589 None:intergenic
GTATGTTCTTACAACTTATG+AGG 0.392134 7:-79479706 MsaT038682.1:CDS
TTACATTTGTAGTAGCTTCT+CGG 0.393877 7:+79480820 None:intergenic
TTTCCTGGGGTCAAGTTTGA+TGG 0.396538 7:-79479532 MsaT038682.1:CDS
TGTAAATAATTTCTCTTATG+TGG 0.405835 7:+79480749 None:intergenic
CTATCCAGTCTTACCTTTCA+GGG 0.409192 7:-79479263 MsaT038682.1:CDS
ATCGAATAAGAAGAAGAAAC+TGG 0.411611 7:-79486599 MsaT038682.1:CDS
CCTGAAATCAGTTGCGAACT+CGG 0.414155 7:-79486574 MsaT038682.1:CDS
CATGCAGCATATGAAAATTC+TGG 0.417493 7:+79479123 None:intergenic
TGGATTCTTAAAGGGAAAAC+AGG 0.418938 7:-79479217 MsaT038682.1:CDS
CTGCTTAGTCTTCCCTCGTC+TGG 0.422681 7:-79479336 MsaT038682.1:CDS
TCTGACATTTCATCACTAGA+AGG 0.422687 7:+79480676 None:intergenic
CAGTTGAGGGATATGGATAC+TGG 0.432308 7:-79479237 MsaT038682.1:CDS
GTTTGAATCAGACGACTCTC+AGG 0.432358 7:-79480494 MsaT038682.1:CDS
AATGCAGTGGGACTAATTCC+AGG 0.434887 7:+79484089 None:intergenic
CCTTTCAGGGCAGCAGTTGA+GGG 0.435365 7:-79479250 MsaT038682.1:CDS
ACCTTTCAGGGCAGCAGTTG+AGG 0.437384 7:-79479251 MsaT038682.1:CDS
ACACACACCTCAATCACTTC+CGG 0.439655 7:+79487415 None:intergenic
TGAGATCTAGCTCTCTTCAT+AGG 0.444404 7:+79480523 None:intergenic
ATGGATACTGGATTCTTAAA+GGG 0.450331 7:-79479225 MsaT038682.1:CDS
TAAGACTGGATAGAATTCAT+AGG 0.452023 7:+79479273 None:intergenic
TGAGGCACACCAACATGGTC+AGG 0.455059 7:+79479408 None:intergenic
CTTGGTCACATCAGAAGGTT+GGG 0.455463 7:+79480555 None:intergenic
CGTCATGCTTCCTAATTCTC+AGG 0.461335 7:-79484054 MsaT038682.1:intron
ATCAGTCTAATTGTCAGGTC+AGG 0.465422 7:-79480798 MsaT038682.1:CDS
AGCCATGGTGATCGAATTGC+TGG 0.466774 7:+79484122 None:intergenic
TGATTGTTATTTCTAGCAGC+AGG 0.467884 7:+79479663 None:intergenic
AATAATTGCCACATGATGAA+TGG 0.472511 7:-79481102 MsaT038682.1:CDS
AGCCGGAGCAAAGACCTTAC+AGG 0.475201 7:-79480896 MsaT038682.1:CDS
TGAGAATTAGGAAGCATGAC+GGG 0.476291 7:+79484056 None:intergenic
CATGTTGGTGTGCCTCAAAC+AGG 0.478171 7:-79479402 MsaT038682.1:CDS
AAACTCCCGGTGGTGGGAGA+TGG 0.482446 7:+79483248 None:intergenic
CCTTTCCACATGTTTCCTTA+CGG 0.483981 7:+79479746 None:intergenic
CATGGTGAAACTCCCGGTGG+TGG 0.485514 7:+79483241 None:intergenic
CATAAGAGAAATTATTTACA+GGG 0.486101 7:-79480746 MsaT038682.1:CDS
AGTTTCAGAATTTGGGATAA+CGG 0.486455 7:+79479605 None:intergenic
TCTGGAAATTATTCTCTAGC+TGG 0.487569 7:-79479318 MsaT038682.1:CDS
TACTACAAATGCACAAGTGC+TGG 0.487847 7:-79479774 MsaT038682.1:CDS
ATGTAATCAGTCTAATTGTC+AGG 0.488649 7:-79480803 MsaT038682.1:CDS
AAGAAGCATAGCTGAGAGAA+GGG 0.496588 7:-79484204 MsaT038682.1:CDS
TTAAAATGAGATGGAAGAGT+TGG 0.497826 7:+79479579 None:intergenic
TACAGGATGGTTATAATTGG+AGG 0.506254 7:-79480879 MsaT038682.1:CDS
AAAGAGATGTCTCGTGCAGC+CGG 0.507051 7:-79480913 MsaT038682.1:CDS
GCTTGGTCACATCAGAAGGT+TGG 0.507741 7:+79480554 None:intergenic
GAAGCAATAGATCCTGTTTG+AGG 0.510047 7:+79479390 None:intergenic
CTCGAAGCCGGAAGTGATTG+AGG 0.510582 7:-79487422 MsaT038682.1:intron
TCCGCACTTGCTAATCATGA+TGG 0.511029 7:-79480463 MsaT038682.1:CDS
TATGTTCTTACAACTTATGA+GGG 0.511714 7:-79479705 MsaT038682.1:CDS
AAAAGATGCAAAACACAATC+CGG 0.512398 7:-79480608 MsaT038682.1:CDS
ATCCTGTAAGGTCTTTGCTC+CGG 0.513300 7:+79480894 None:intergenic
GTTCTGCTTCTAGGACATGA+TGG 0.513542 7:+79480938 None:intergenic
GTAGTTCATTTGAGATGAGG+AGG 0.516051 7:+79479476 None:intergenic
CTTCATAGGATCCGAAAGCT+TGG 0.516828 7:+79480537 None:intergenic
CTGCCACCTCTCGTCGATGA+GGG 0.518608 7:-79483218 MsaT038682.1:CDS
CATCGATGTCACTCTCACTT+TGG 0.518656 7:+79480197 None:intergenic
AGAGTAGTTCATTTGAGATG+AGG 0.522401 7:+79479473 None:intergenic
CCGACTCAGAATCGAAAAGA+AGG 0.525017 7:-79480384 MsaT038682.1:intron
CCCTCAACTGCTGCCCTGAA+AGG 0.525438 7:+79479250 None:intergenic
CCAATTATAACCATCCTGTA+AGG 0.525676 7:+79480882 None:intergenic
CGTAAGGAAACATGTGGAAA+GGG 0.527636 7:-79479745 MsaT038682.1:CDS
ATCATACCTTATGGCTCCTA+CGG 0.531127 7:-79479438 MsaT038682.1:CDS
GGAAGACTAAGCAGCGGTGG+TGG 0.534348 7:+79479345 None:intergenic
TTCCTGGGGTCAAGTTTGAT+GGG 0.534527 7:-79479531 MsaT038682.1:CDS
GAAAGCTTGGTCACATCAGA+AGG 0.536995 7:+79480550 None:intergenic
GTCATGCCATCTCCCACCAC+CGG 0.537102 7:-79483254 MsaT038682.1:CDS
ATGGTCAGGGATTGCTCCGT+AGG 0.538906 7:+79479422 None:intergenic
TGCTGAAGCCAATGAAACAC+GGG 0.544046 7:-79480650 MsaT038682.1:CDS
GCTGCCCTGAAAGGTAAGAC+TGG 0.546854 7:+79479259 None:intergenic
AAAGAAGCATAGCTGAGAGA+AGG 0.549713 7:-79484205 MsaT038682.1:intron
GGAAGCCTGATGATCAAGAA+AGG 0.550805 7:-79480582 MsaT038682.1:CDS
TGAAACAATGGTGCCTCGGA+GGG 0.551047 7:-79480245 MsaT038682.1:CDS
TGGCAGCATGGTGAAACTCC+CGG 0.554532 7:+79483235 None:intergenic
ATGGACAGAAGGTTGTCAAA+GGG 0.557821 7:-79480144 MsaT038682.1:CDS
TATGGACAGAAGGTTGTCAA+AGG 0.558376 7:-79480145 MsaT038682.1:CDS
ATGGCTTGTGATGGTGATGG+TGG 0.559040 7:+79479063 None:intergenic
ATTGCTCCGTAGGAGCCATA+AGG 0.560664 7:+79479432 None:intergenic
ATGAAGAGAGCTAGATCTCA+AGG 0.562206 7:-79480520 MsaT038682.1:CDS
GCTGCCACCTCTCGTCGATG+AGG 0.566019 7:-79483219 MsaT038682.1:CDS
AGGTGATAAGACTGCTTGAG+TGG 0.567812 7:+79480426 None:intergenic
CCGTAAGGAAACATGTGGAA+AGG 0.571889 7:-79479746 MsaT038682.1:CDS
TTGATGCTTGAAATTGAAAG+AGG 0.571978 7:+79483148 None:intergenic
TTCTAGCAGCAGGAACCTCA+TGG 0.572737 7:+79479673 None:intergenic
CCATGGCTCACAATACCACC+TGG 0.573773 7:-79484107 MsaT038682.1:CDS
GAAATAGAAAGAGAAAGGAA+TGG 0.574188 7:-79486647 MsaT038682.1:intron
ATGCTGAAGCCAATGAAACA+CGG 0.575770 7:-79480651 MsaT038682.1:CDS
TTTGAATCAGACGACTCTCA+GGG 0.576536 7:-79480493 MsaT038682.1:CDS
GGTACTTGCATGATCAAAAG+AGG 0.578306 7:+79479158 None:intergenic
GAGCTACCCGGTTGAAACAA+TGG 0.579050 7:-79480257 MsaT038682.1:CDS
TTCCCATCAAACTTGACCCC+AGG 0.581655 7:+79479529 None:intergenic
ATGCAAAACACAATCCGGAA+TGG 0.585649 7:-79480603 MsaT038682.1:CDS
CGGTTGAAACAATGGTGCCT+CGG 0.589928 7:-79480249 MsaT038682.1:CDS
ATGGTGAAACTCCCGGTGGT+GGG 0.589972 7:+79483242 None:intergenic
TGGTGATGGTGGAGTGTGTG+AGG 0.591071 7:+79479074 None:intergenic
GAGAATTAGGAAGCATGACG+GGG 0.591867 7:+79484057 None:intergenic
TCATGCCATCTCCCACCACC+GGG 0.592425 7:-79483253 MsaT038682.1:CDS
TTCAATCATGGGTTATCTCG+CGG 0.596028 7:-79487458 None:intergenic
TTCGGTCAAACATAAACAAG+TGG 0.596468 7:-79483183 MsaT038682.1:CDS
TACTTGATGATGGTTATCGC+TGG 0.598356 7:-79480174 MsaT038682.1:CDS
CTGGCGAAAGTATGGACAGA+AGG 0.605120 7:-79480155 MsaT038682.1:CDS
GACATCGATGTACTTGATGA+TGG 0.605527 7:-79480184 MsaT038682.1:CDS
CTGAGAATTAGGAAGCATGA+CGG 0.607053 7:+79484055 None:intergenic
CAGGAAGAAGGAGAGCTACC+CGG 0.610711 7:-79480269 MsaT038682.1:CDS
GATCCTCGACGACTTGAACG+TGG 0.613406 7:+79480703 None:intergenic
CTTTGATAAATGGCTTGTGA+TGG 0.614090 7:+79479054 None:intergenic
TTGAAACAATGGTGCCTCGG+AGG 0.618982 7:-79480246 MsaT038682.1:CDS
CGAATTGCTGGAGAAACCAA+AGG 0.619482 7:+79484134 None:intergenic
ACCATCATGATTAGCAAGTG+CGG 0.620117 7:+79480462 None:intergenic
GATCCCTCATCGACGAGAGG+TGG 0.620170 7:+79483215 None:intergenic
GGTACTTGCTTGATCAAGAG+AGG 0.620767 7:+79479095 None:intergenic
GAGGCACACCAACATGGTCA+GGG 0.624763 7:+79479409 None:intergenic
TATCTCCTCCATTCATCATG+TGG 0.627439 7:+79481094 None:intergenic
TTGAAATTGAAAGAGGCAGT+AGG 0.628342 7:+79483155 None:intergenic
CTGTTTGAGGCACACCAACA+TGG 0.628409 7:+79479403 None:intergenic
AATCATGATGGTGATACAGA+TGG 0.629440 7:-79480451 MsaT038682.1:CDS
AGTTCTATATAACTCGAAGC+CGG 0.631393 7:-79487434 MsaT038682.1:CDS
AGAGAATAATTTCCAGACGA+GGG 0.634992 7:+79479324 None:intergenic
CAAGTGCTGGATGTACCGTA+AGG 0.637491 7:-79479761 MsaT038682.1:CDS
AGAAGCATAGCTGAGAGAAG+GGG 0.640099 7:-79484203 MsaT038682.1:CDS
GCAGCATATGAAAATTCTGG+TGG 0.640591 7:+79479126 None:intergenic
GGGGATTCAAGCAATGCAGT+GGG 0.641684 7:+79484077 None:intergenic
CAAGTGCTAATGTGTTACAC+AGG 0.642314 7:-79479632 MsaT038682.1:CDS
GGAGCAATCCCTGACCATGT+TGG 0.645447 7:-79479417 MsaT038682.1:CDS
TCAAAGGGAATCCAAACCCA+AGG 0.645747 7:-79480129 MsaT038682.1:intron
TCAATCCACAGCGAGGACAT+CGG 0.650041 7:-79480964 MsaT038682.1:CDS
ATCGACGAGAGGTGGCAGCA+TGG 0.651677 7:+79483223 None:intergenic
GAGGCACCATTGTTTCAACC+GGG 0.652598 7:+79480251 None:intergenic
TAGAGAATAATTTCCAGACG+AGG 0.653085 7:+79479323 None:intergenic
TGAGGGATCAATGATCACTT+CGG 0.653266 7:-79483201 MsaT038682.1:CDS
AATTGCCACATGATGAATGG+AGG 0.654024 7:-79481099 MsaT038682.1:CDS
CCAGGTGGTATTGTGAGCCA+TGG 0.654838 7:+79484107 None:intergenic
GAGGGAAGACTAAGCAGCGG+TGG 0.655277 7:+79479342 None:intergenic
GTACTTGCTTGATCAAGAGA+GGG 0.656108 7:+79479096 None:intergenic
GGCGCACGAATTGCCCTCCG+AGG 0.656268 7:+79480232 None:intergenic
CGGGGAAACATTCAGTCACG+AGG 0.656337 7:-79480631 MsaT038682.1:CDS
ATGTACCGTAAGGAAACATG+TGG 0.659013 7:-79479751 MsaT038682.1:CDS
AAGGTGGAAAGATCACATGA+TGG 0.666346 7:-79480772 MsaT038682.1:CDS
GTACTTGCATGATCAAAAGA+GGG 0.666511 7:+79479159 None:intergenic
ATTGATCCCTCATCGACGAG+AGG 0.672996 7:+79483212 None:intergenic
CTCCAGCAATTCGATCACCA+TGG 0.675090 7:-79484124 MsaT038682.1:CDS
GGTTTCAATAAAATCAACAC+AGG 0.679076 7:-79484182 MsaT038682.1:CDS
TCACTTTGGACTATCACTCG+TGG 0.680114 7:+79480211 None:intergenic
ATAAGAGAAATTATTTACAG+GGG 0.682697 7:-79480745 MsaT038682.1:CDS
TTGAATCAGACGACTCTCAG+GGG 0.693866 7:-79480492 MsaT038682.1:CDS
GGTGTCCGATGTCCTCGCTG+TGG 0.695690 7:+79480959 None:intergenic
AAACCACGTTCAAGTCGTCG+AGG 0.697615 7:-79480706 MsaT038682.1:CDS
AAATTCTGGTGGAGTGTGTG+AGG 0.698512 7:+79479137 None:intergenic
GACGAGGGAAGACTAAGCAG+CGG 0.703880 7:+79479339 None:intergenic
AGAATTAGGAAGCATGACGG+GGG 0.705841 7:+79484058 None:intergenic
GGAGCAAAGACCTTACAGGA+TGG 0.707249 7:-79480892 MsaT038682.1:CDS
TAAATGGCTTGTGATGGTGA+TGG 0.711143 7:+79479060 None:intergenic
TGAAAATTCAATCCACAGCG+AGG 0.715022 7:-79480971 MsaT038682.1:CDS
TGAGGGAAAACATAACCATG+AGG 0.727205 7:-79479688 MsaT038682.1:CDS
GCTGAAGCCAATGAAACACG+GGG 0.735702 7:-79480649 MsaT038682.1:CDS
GCAGTGGGACTAATTCCAGG+TGG 0.767254 7:+79484092 None:intergenic
CAGCATGGTGAAACTCCCGG+TGG 0.789500 7:+79483238 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 79479029 79487473 79479029 ID=MsaG038682
Chr7 mRNA 79479029 79487473 79479029 ID=MsaT038682.1;Parent=MsaG038682
Chr7 exon 79479029 79479800 79479029 ID=MsaT038682.1.exon7;Parent=MsaT038682.1
Chr7 CDS 79479029 79479800 79479029 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79480130 79480288 79480130 ID=MsaT038682.1.exon6;Parent=MsaT038682.1
Chr7 CDS 79480130 79480288 79480130 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79480385 79481130 79480385 ID=MsaT038682.1.exon5;Parent=MsaT038682.1
Chr7 CDS 79480385 79481130 79480385 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79483097 79483276 79483097 ID=MsaT038682.1.exon4;Parent=MsaT038682.1
Chr7 CDS 79483097 79483276 79483097 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79484055 79484223 79484055 ID=MsaT038682.1.exon3;Parent=MsaT038682.1
Chr7 CDS 79484055 79484223 79484055 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79486532 79486662 79486532 ID=MsaT038682.1.exon2;Parent=MsaT038682.1
Chr7 CDS 79486532 79486662 79486532 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Chr7 exon 79487423 79487473 79487423 ID=MsaT038682.1.exon1;Parent=MsaT038682.1
Chr7 CDS 79487423 79487473 79487423 ID=cds.MsaT038682.1;Parent=MsaT038682.1
Gene Sequence

>MsaT038682.1

ATGGGTTATCTCGCGGCAGTTCTATATAACTCGAAGCCGGAAGTGATTGAGAAAGAGAAAGGAATGGCAAAGTTTAGACAAAGAAGACGCGAATCGAATAAGAAGAAGAAACTGGAACCTGAAATCAGTTGCGAACTCGGAAAATGGATGCTTCTGATGACGAGTTTGAATCTATTTGAGAAAAGCATAGCTGAGAGAAGGGGTTTCAATAAAATCAACACAGGACTTGTTCGTTTTGGTGCAACAACGCCTTTGGTTTCTCCAGCAATTCGATCACCATGGCTCACAATACCACCTGGAATTAGTCCCACTGCATTGCTTGAATCCCCCGTCATGCTTCCTAATTCTCAGGTCATGCCATCTCCCACCACCGGGAGTTTCACCATGCTGCCACCTCTCGTCGATGAGGGATCAATGATCACTTCGGTCAAACATAAACAAGTGGATGTGCCTACTGCCTCTTTCAATTTCAAGCATCAAGCCAATTTTGATGTTGAGTCTTTATCTCCCTATTTTTCTTCTCTAAATCAGGTTTCTAATAATTGCCACATGATGAATGGAGGAGATAGAGACAGTCAAATGCTTGTTCAAGATCAGCAACTGTTAGATTTTTCATTCCCAGAAGATTTTTCAAATGACTTTTTAGCTAGCGATGAAAGCATTCTGCTTGAAAATTCAATCCACAGCGAGGACATCGGACACCATCATGTCCTAGAAGCAGAACAGAAAGAGATGTCTCGTGCAGCCGGAGCAAAGACCTTACAGGATGGTTATAATTGGAGGAAATATGGCCAAAAACATGTAAAAGGCAGTGAATATCCGAGAAGCTACTACAAATGTAATCAGTCTAATTGTCAGGTCAGGAAAAAGGTGGAAAGATCACATGATGGCCACATAAGAGAAATTATTTACAGGGGTGATCATAACCATGCAAAACCACGTTCAAGTCGTCGAGGATCAGTACCTTCTAGTGATGAAATGTCAGAAAATGCTGAAGCCAATGAAACACGGGGAAACATTCAGTCACGAGGAAAAGATGCAAAACACAATCCGGAATGGAAGCCTGATGATCAAGAAAGGACATCCCAACCTTCTGATGTGACCAAGCTTTCGGATCCTATGAAGAGAGCTAGATCTCAAGGTAAGTTTGAATCAGACGACTCTCAGGGGCATTCTTCCGCACTTGCTAATCATGATGGTGATACAGATGGAGCCACTCAAGCAGTCTTATCACCTGAAAACAATTCCGAAGATTCCGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGTTGAAACAATGGTGCCTCGGAGGGCAATTCGTGCGCCACGAGTGATAGTCCAAAGTGAGAGTGACATCGATGTACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTACCGTAAGGAAACATGTGGAAAGGGCTTCACACAATTTTAAGTATGTTCTTACAACTTATGAGGGAAAACATAACCATGAGGTTCCTGCTGCTAGAAATAACAATCATGCAAGCTCAAGTGCTAATGTGTTACACAGGAGTGCCGTTATCCCAAATTCTGAAACTCGTCCAACTCTTCCATCTCATTTTAATAGAAAACCTGATTTTAGCAATGATTTCCTGGGGTCAAGTTTGATGGGAAGTTTCAGTAATGATATGAAGTTTGGAGCTTCCTCCTCATCTCAAATGAACTACTCTTCTTTGAATAACATCATACCTTATGGCTCCTACGGAGCAATCCCTGACCATGTTGGTGTGCCTCAAACAGGATCTATTGCTTCAATGTTTCCTGAATTTCAAATGCCACCACCGCTGCTTAGTCTTCCCTCGTCTGGAAATTATTCTCTAGCTGGAATTAATCTCAACTATGAAAAACCTATGAATTCTATCCAGTCTTACCTTTCAGGGCAGCAGTTGAGGGATATGGATACTGGATTCTTAAAGGGAAAACAGGTGCTGAATGAAGAATCTTCATATGCTGCATATGCACCCTCTTTTGATCATGCAAGTACCTCACACACTCCACCAGAATTTTCATATGCTGCATGTGCACCCTCTCTTGATCAAGCAAGTACCTCACACACTCCACCATCACCATCACAAGCCATTTATCAAAGTGTCATGCAAAATTTCCCTTCATAG
Protein sequence

>MsaT038682.1

MGYLAAVLYNSKPEVIEKEKGMAKFRQRRRESNKKKKLEPEISCELGKWMLLMTSLNLFEKSIAERRGFNKINTGLVRFGATTPLVSPAIRSPWLTIPPGISPTALLESPVMLPNSQVMPSPTTGSFTMLPPLVDEGSMITSVKHKQVDVPTASFNFKHQANFDVESLSPYFSSLNQVSNNCHMMNGGDRDSQMLVQDQQLLDFSFPEDFSNDFLASDESILLENSIHSEDIGHHHVLEAEQKEMSRAAGAKTLQDGYNWRKYGQKHVKGSEYPRSYYKCNQSNCQVRKKVERSHDGHIREIIYRGDHNHAKPRSSRRGSVPSSDEMSENAEANETRGNIQSRGKDAKHNPEWKPDDQERTSQPSDVTKLSDPMKRARSQGKFESDDSQGHSSALANHDGDTDGATQAVLSPENNSEDSDSESKRRKKESYPVETMVPRRAIRAPRVIVQSESDIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNFKYVLTTYEGKHNHEVPAARNNNHASSSANVLHRSAVIPNSETRPTLPSHFNRKPDFSNDFLGSSLMGSFSNDMKFGASSSSQMNYSSLNNIIPYGSYGAIPDHVGVPQTGSIASMFPEFQMPPPLLSLPSSGNYSLAGINLNYEKPMNSIQSYLSGQQLRDMDTGFLKGKQVLNEESSYAAYAPSFDHASTSHTPPEFSYAACAPSLDQASTSHTPPSPSQAIYQSVMQNFPS*