AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG038683

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038683 MtrunA17_Chr7g0249311 94.196 672 20 2 8 660 1 672 0.0 1304
MsaG038683 MtrunA17_Chr7g0249301 70.023 437 42 6 90 494 1 380 0.0 556
MsaG038683 MtrunA17_Chr3g0079691 44.075 481 209 12 1 467 130 564 5.71e-102 326
MsaG038683 MtrunA17_Chr7g0218081 50.859 291 108 7 182 470 225 482 7.79e-82 268
MsaG038683 MtrunA17_Chr3g0101131 52.431 288 94 7 178 464 236 481 9.92e-82 270
MsaG038683 MtrunA17_Chr5g0445311 46.462 325 121 4 144 464 155 430 8.21e-81 266
MsaG038683 MtrunA17_Chr7g0243891 47.811 297 91 7 182 470 213 453 7.60e-74 247
MsaG038683 MtrunA17_Chr5g0418191 48.592 284 100 6 182 464 148 386 1.63e-73 243
MsaG038683 MtrunA17_Chr5g0432161 49.474 285 98 3 181 460 240 483 6.55e-73 246
MsaG038683 MtrunA17_Chr5g0432161 58.209 67 27 1 185 250 421 487 1.28e-15 80.5
MsaG038683 MtrunA17_Chr7g0263531 44.884 303 125 6 168 469 171 432 3.05e-70 234
MsaG038683 MtrunA17_Chr4g0004911 43.831 308 110 6 175 481 174 419 1.73e-64 221
MsaG038683 MtrunA17_Chr4g0004911 39.216 102 62 0 398 499 184 285 2.26e-15 79.3
MsaG038683 MtrunA17_Chr5g0447701 38.667 300 129 7 182 481 89 333 1.07e-50 181
MsaG038683 MtrunA17_Chr4g0074001 39.007 282 122 7 184 460 185 421 1.34e-46 172
MsaG038683 MtrunA17_Chr4g0074001 50.000 82 39 2 169 248 342 423 1.25e-15 80.1
MsaG038683 MtrunA17_Chr3g0106491 68.571 105 33 0 356 460 323 427 2.39e-41 157
MsaG038683 MtrunA17_Chr4g0042831 52.667 150 61 3 342 481 213 362 2.74e-41 154
MsaG038683 MtrunA17_Chr4g0042831 67.164 67 21 1 182 247 142 208 8.50e-23 101
MsaG038683 MtrunA17_Chr4g0042831 41.121 107 53 2 185 290 278 375 7.96e-17 83.2
MsaG038683 MtrunA17_Chr4g0042831 55.000 60 27 0 398 457 145 204 6.13e-13 71.2
MsaG038683 MtrunA17_Chr1g0188941 60.759 79 31 0 379 457 32 110 1.24e-29 113
MsaG038683 MtrunA17_Chr1g0188941 51.667 60 28 1 185 243 51 110 1.26e-14 70.5
MsaG038683 MtrunA17_Chr8g0335811 61.842 76 29 0 379 454 135 210 1.79e-28 114
MsaG038683 MtrunA17_Chr8g0335811 60.345 58 22 1 185 241 154 211 1.28e-16 79.7
MsaG038683 MtrunA17_Chr3g0129361 59.459 74 30 0 381 454 127 200 5.81e-26 106
MsaG038683 MtrunA17_Chr3g0129361 56.897 58 24 1 185 241 144 201 4.54e-16 77.8
MsaG038683 MtrunA17_Chr2g0294231 58.537 82 34 0 382 463 187 268 7.94e-26 110
MsaG038683 MtrunA17_Chr2g0294231 57.812 64 26 1 185 247 203 266 6.84e-17 83.2
MsaG038683 MtrunA17_Chr1g0150801 57.895 76 31 1 379 454 84 158 3.67e-25 102
MsaG038683 MtrunA17_Chr1g0150801 43.038 79 38 2 169 240 80 158 3.19e-12 65.1
MsaG038683 MtrunA17_Chr5g0443131 57.500 80 34 0 384 463 143 222 3.68e-25 106
MsaG038683 MtrunA17_Chr5g0443131 60.938 64 24 1 185 247 157 220 3.83e-17 82.8
MsaG038683 MtrunA17_Chr7g0270191 59.211 76 31 0 382 457 129 204 4.21e-25 105
MsaG038683 MtrunA17_Chr7g0270191 57.353 68 28 1 185 251 145 212 6.79e-17 82.0
MsaG038683 MtrunA17_Chr6g0485431 44.068 118 64 2 348 463 103 220 4.51e-25 107
MsaG038683 MtrunA17_Chr6g0485431 44.615 65 34 2 186 248 155 219 9.93e-13 70.1
MsaG038683 MtrunA17_Chr4g0051881 56.250 80 35 0 384 463 164 243 4.96e-25 106
MsaG038683 MtrunA17_Chr4g0051881 62.500 64 23 1 185 247 178 241 9.87e-18 85.1
MsaG038683 MtrunA17_Chr8g0383251 51.220 82 40 0 385 466 95 176 5.87e-25 102
MsaG038683 MtrunA17_Chr8g0383251 52.381 63 29 1 185 246 108 170 1.62e-12 66.6
MsaG038683 MtrunA17_Chr8g0383351 57.333 75 31 1 381 454 142 216 7.96e-25 103
MsaG038683 MtrunA17_Chr8g0383351 56.897 58 24 1 185 241 160 217 2.62e-16 79.0
MsaG038683 MtrunA17_Chr1g0194481 57.143 77 33 0 382 458 142 218 2.19e-24 104
MsaG038683 MtrunA17_Chr1g0194481 59.375 64 25 1 185 247 158 221 8.79e-18 85.1
MsaG038683 MtrunA17_Chr5g0418781 55.263 76 34 0 379 454 105 180 5.30e-24 102
MsaG038683 MtrunA17_Chr5g0418781 57.353 68 28 1 185 251 124 191 6.59e-17 81.6
MsaG038683 MtrunA17_Chr3g0129321 56.000 75 33 0 384 458 104 178 8.90e-24 99.8
MsaG038683 MtrunA17_Chr3g0129321 53.968 63 28 1 185 246 118 180 2.88e-14 72.4
MsaG038683 MtrunA17_Chr1g0189391 60.563 71 27 1 385 454 84 154 1.60e-23 102
MsaG038683 MtrunA17_Chr1g0189391 42.169 83 39 3 161 241 80 155 2.35e-12 68.9
MsaG038683 MtrunA17_Chr7g0224801 56.250 80 34 1 389 467 84 163 1.61e-23 97.8
MsaG038683 MtrunA17_Chr7g0224801 52.632 57 26 1 185 240 93 149 4.38e-14 70.9
MsaG038683 MtrunA17_Chr8g0386241 53.846 78 36 0 379 456 84 161 1.17e-22 95.9
MsaG038683 MtrunA17_Chr8g0386241 37.209 129 59 5 131 240 34 159 1.53e-15 75.1
MsaG038683 MtrunA17_Chr4g0068541 55.844 77 34 0 382 458 192 268 1.31e-22 100
MsaG038683 MtrunA17_Chr4g0068541 58.333 60 24 1 185 243 208 267 4.92e-16 80.9
MsaG038683 MtrunA17_Chr7g0270831 43.396 106 52 3 355 459 180 278 1.76e-22 100
MsaG038683 MtrunA17_Chr7g0270831 51.667 60 27 2 186 243 217 276 1.59e-12 70.1
MsaG038683 MtrunA17_Chr5g0432071 64.062 64 23 0 185 248 104 167 8.19e-22 94.4
MsaG038683 MtrunA17_Chr5g0432071 51.613 62 29 1 398 459 104 164 5.45e-14 71.6
MsaG038683 MtrunA17_Chr4g0075201 41.964 112 47 2 349 459 235 329 1.04e-21 99.0
MsaG038683 MtrunA17_Chr4g0075201 48.333 60 29 2 186 243 268 327 7.41e-11 65.1
MsaG038683 MtrunA17_Chr2g0288871 52.564 78 36 1 381 457 288 365 1.27e-21 99.4
MsaG038683 MtrunA17_Chr2g0288871 50.000 60 28 2 186 243 306 365 1.31e-11 67.8
MsaG038683 MtrunA17_Chr2g0322391 51.250 80 38 1 381 459 332 411 2.66e-21 98.6
MsaG038683 MtrunA17_Chr2g0322391 47.692 65 32 2 181 243 345 409 3.44e-11 66.2
MsaG038683 MtrunA17_Chr4g0051181 50.633 79 38 1 382 459 227 305 3.61e-21 97.4
MsaG038683 MtrunA17_Chr7g0248721 47.573 103 53 1 352 454 95 196 4.12e-21 92.4
MsaG038683 MtrunA17_Chr7g0248721 59.649 57 21 2 185 240 141 196 8.32e-14 71.2
MsaG038683 MtrunA17_Chr3g0099641 48.718 78 39 1 381 457 234 311 4.76e-21 96.7
MsaG038683 MtrunA17_Chr3g0099641 46.875 64 32 2 186 247 252 315 4.01e-12 68.9
MsaG038683 MtrunA17_Chr4g0060271 50.000 78 38 1 381 457 238 315 5.61e-21 97.4
MsaG038683 MtrunA17_Chr4g0060271 49.206 63 30 2 183 243 253 315 5.38e-11 65.9
MsaG038683 MtrunA17_Chr4g0053281 51.136 88 39 2 379 465 250 334 1.10e-20 94.0
MsaG038683 MtrunA17_Chr4g0053281 50.000 58 27 2 186 241 267 324 1.66e-11 66.2
MsaG038683 MtrunA17_Chr4g0025061 49.383 81 40 1 380 459 342 422 1.77e-20 95.9
MsaG038683 MtrunA17_Chr7g0216891 39.669 121 55 3 349 454 159 276 3.24e-20 95.1
MsaG038683 MtrunA17_Chr5g0447711 44.444 99 53 1 383 481 215 311 3.69e-20 92.0
MsaG038683 MtrunA17_Chr5g0447711 51.613 62 30 0 185 246 83 144 3.27e-14 73.9
MsaG038683 MtrunA17_Chr2g0302391 48.148 81 41 1 380 459 193 273 5.80e-20 93.2
MsaG038683 MtrunA17_Chr2g0302391 45.312 64 33 2 186 247 212 275 2.26e-11 66.6
MsaG038683 MtrunA17_Chr1g0147881 47.368 95 47 2 379 472 243 335 2.35e-19 90.1
MsaG038683 MtrunA17_Chr1g0147881 50.000 68 29 3 178 240 252 319 5.51e-12 67.8
MsaG038683 MtrunA17_Chr5g0401821 45.370 108 47 3 362 468 174 270 6.97e-19 87.4
MsaG038683 MtrunA17_Chr5g0401821 50.000 58 27 2 186 241 200 257 5.14e-11 63.9
MsaG038683 MtrunA17_Chr4g0025051 50.000 76 37 1 385 459 322 397 2.40e-18 89.0
MsaG038683 MtrunA17_Chr4g0025051 36.364 110 59 5 144 247 295 399 9.87e-11 64.7
MsaG038683 MtrunA17_Chr3g0136961 41.000 100 53 3 358 454 99 195 5.54e-18 85.1
MsaG038683 MtrunA17_Chr3g0136961 50.847 59 27 2 185 241 138 196 1.27e-11 66.2
MsaG038683 MtrunA17_Chr2g0333851 45.833 96 46 3 366 458 138 230 1.35e-17 84.3
MsaG038683 MtrunA17_Chr2g0333851 49.231 65 29 3 185 247 169 231 3.53e-11 65.1
MsaG038683 MtrunA17_Chr7g0238921 57.895 57 24 0 398 454 124 180 5.19e-17 82.8
MsaG038683 MtrunA17_Chr7g0238921 54.839 62 27 1 180 240 119 180 4.79e-13 70.9
MsaG038683 MtrunA17_Chr4g0071521 41.818 110 52 3 346 454 204 302 8.72e-17 82.0
MsaG038683 MtrunA17_Chr4g0071521 49.153 59 28 2 186 242 246 304 1.44e-11 66.2
MsaG038683 MtrunA17_Chr1g0184691 49.383 81 36 3 379 457 277 354 2.17e-16 81.3
MsaG038683 MtrunA17_Chr1g0184691 52.542 59 26 2 186 242 294 352 1.86e-11 66.2
MsaG038683 MtrunA17_Chr1g0202461 44.048 84 45 2 379 461 243 325 2.45e-16 81.6
MsaG038683 MtrunA17_Chr1g0202461 46.575 73 37 2 173 243 249 321 5.31e-15 77.4
MsaG038683 MtrunA17_Chr6g0468181 52.632 76 27 1 201 276 18 84 2.67e-16 75.5
MsaG038683 MtrunA17_Chr2g0293481 40.000 100 53 2 363 461 238 331 7.21e-16 80.9
MsaG038683 MtrunA17_Chr2g0293481 47.143 70 35 2 176 243 258 327 6.36e-12 68.6
MsaG038683 MtrunA17_Chr1g0150271 41.379 87 47 2 396 481 99 182 7.83e-16 77.8
MsaG038683 MtrunA17_Chr1g0150271 45.312 64 33 2 185 246 101 164 5.02e-11 63.5
MsaG038683 MtrunA17_Chr4g0001361 52.381 63 29 1 396 457 160 222 1.43e-15 78.2
MsaG038683 MtrunA17_Chr4g0001361 49.180 61 29 2 185 243 162 222 3.93e-11 64.7
MsaG038683 MtrunA17_Chr1g0150281 42.857 84 42 3 377 454 114 197 2.56e-15 77.0
MsaG038683 MtrunA17_Chr8g0387501 50.746 67 32 1 397 462 128 194 3.19e-15 76.6
MsaG038683 MtrunA17_Chr8g0387501 49.296 71 32 3 186 254 130 198 4.07e-14 73.2
MsaG038683 MtrunA17_Chr4g0024391 43.421 76 42 1 385 459 216 291 4.15e-15 78.6
MsaG038683 MtrunA17_Chr8g0379461 44.928 69 37 1 399 466 77 145 4.41e-15 75.5
MsaG038683 MtrunA17_Chr8g0379461 51.613 62 28 2 186 245 77 138 8.11e-13 68.9
MsaG038683 MtrunA17_Chr7g0248691 37.037 108 63 3 359 462 113 219 6.92e-15 76.3
MsaG038683 MtrunA17_Chr7g0248691 42.466 73 40 2 173 243 142 214 8.37e-11 63.9
MsaG038683 MtrunA17_Chr2g0289181 50.000 76 36 2 185 258 14 89 7.06e-15 74.7
MsaG038683 MtrunA17_Chr2g0289181 46.479 71 37 1 399 468 15 85 1.68e-14 73.6
MsaG038683 MtrunA17_Chr7g0270051 50.000 62 30 1 399 459 54 115 9.12e-15 75.1
MsaG038683 MtrunA17_Chr7g0270051 53.333 60 26 2 186 243 54 113 8.41e-13 69.3
MsaG038683 MtrunA17_Chr2g0284321 48.052 77 34 2 399 469 36 112 1.00e-14 73.9
MsaG038683 MtrunA17_Chr2g0284321 53.333 60 26 2 186 243 36 95 2.03e-14 72.8
MsaG038683 MtrunA17_Chr8g0348311 39.560 91 50 3 376 462 131 220 1.16e-14 75.9
MsaG038683 MtrunA17_Chr8g0348311 42.667 75 41 2 171 243 141 215 5.10e-12 67.8
MsaG038683 MtrunA17_Chr3g0139021 34.058 138 69 5 327 462 263 380 2.60e-14 75.5
MsaG038683 MtrunA17_Chr7g0228941 50.000 62 30 1 395 455 49 110 3.88e-14 69.7
MsaG038683 MtrunA17_Chr7g0228941 45.161 62 32 2 181 240 48 109 1.92e-11 62.0
MsaG038683 MtrunA17_Chr2g0319961 46.970 66 34 1 399 463 81 146 5.23e-14 72.8
MsaG038683 MtrunA17_Chr2g0319961 50.000 60 28 2 186 243 81 140 5.66e-11 63.5
MsaG038683 MtrunA17_Chr1g0188961 55.769 52 23 0 418 469 3 54 4.50e-13 64.7
MsaG038683 MtrunA17_Chr8g0387981 55.172 58 22 2 185 238 132 189 5.73e-13 70.9
MsaG038683 MtrunA17_Chr3g0126391 53.448 58 23 2 185 238 133 190 6.81e-13 70.5
MsaG038683 MtrunA17_Chr3g0126391 36.607 112 56 4 349 452 86 190 1.13e-11 66.6
MsaG038683 MtrunA17_Chr5g0419241 39.744 78 30 1 349 426 45 105 1.61e-12 64.3
MsaG038683 MtrunA17_Chr8g0347251 33.884 121 62 4 131 238 78 193 5.79e-12 67.8
MsaG038683 MtrunA17_Chr4g0009881 50.000 62 30 1 182 243 14 74 6.17e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038683 AT5G56270.1 41.772 474 208 12 1 460 130 549 5.27e-91 297
MsaG038683 AT4G26440.1 51.027 292 116 3 184 471 177 445 5.57e-83 273
MsaG038683 AT4G26640.5 47.987 298 110 7 164 460 14 267 3.62e-76 249
MsaG038683 AT4G26640.6 47.987 298 110 7 164 460 14 267 3.62e-76 249
MsaG038683 AT4G26640.4 47.987 298 110 7 164 460 14 267 3.62e-76 249
MsaG038683 AT4G26640.3 47.987 298 110 7 164 460 14 267 3.62e-76 249
MsaG038683 AT4G26640.7 47.855 303 112 8 164 464 150 408 6.38e-76 252
MsaG038683 AT4G26640.1 47.855 303 112 8 164 464 118 376 8.17e-76 251
MsaG038683 AT4G26640.2 47.855 303 112 8 164 464 190 448 1.70e-75 252
MsaG038683 AT2G38470.1 50.699 286 104 7 182 466 181 430 4.86e-72 242
MsaG038683 AT1G13960.1 45.652 276 117 4 182 457 226 468 6.48e-70 236
MsaG038683 AT1G13960.2 45.652 276 117 4 182 457 73 315 7.65e-70 231
MsaG038683 AT2G04880.1 33.560 441 236 14 111 516 8 426 1.33e-59 208
MsaG038683 AT2G04880.2 31.735 438 224 11 111 516 8 402 6.47e-59 205
MsaG038683 AT2G37260.2 41.781 292 123 10 174 456 72 325 1.03e-51 182
MsaG038683 AT2G37260.2 54.098 61 27 1 399 459 84 143 5.23e-13 71.2
MsaG038683 AT2G37260.3 41.781 292 123 10 174 456 74 327 1.10e-51 182
MsaG038683 AT2G37260.3 54.098 61 27 1 399 459 86 145 5.27e-13 71.2
MsaG038683 AT2G37260.1 41.781 292 123 10 174 456 154 407 1.87e-51 184
MsaG038683 AT2G37260.1 54.098 61 27 1 399 459 166 225 5.69e-13 72.0
MsaG038683 AT5G07100.2 57.692 130 38 3 331 460 91 203 9.26e-40 145
MsaG038683 AT5G07100.2 70.000 70 20 1 182 250 21 90 1.03e-24 103
MsaG038683 AT5G07100.2 51.613 62 30 0 398 459 24 85 4.94e-14 72.0
MsaG038683 AT5G07100.2 54.412 68 29 2 185 251 141 207 1.74e-13 70.5
MsaG038683 AT5G07100.4 57.692 130 38 3 331 460 91 203 9.26e-40 145
MsaG038683 AT5G07100.4 70.000 70 20 1 182 250 21 90 1.03e-24 103
MsaG038683 AT5G07100.4 51.613 62 30 0 398 459 24 85 4.94e-14 72.0
MsaG038683 AT5G07100.4 54.412 68 29 2 185 251 141 207 1.74e-13 70.5
MsaG038683 AT5G07100.5 57.692 130 38 3 331 460 91 203 9.26e-40 145
MsaG038683 AT5G07100.5 70.000 70 20 1 182 250 21 90 1.03e-24 103
MsaG038683 AT5G07100.5 51.613 62 30 0 398 459 24 85 4.94e-14 72.0
MsaG038683 AT5G07100.5 54.412 68 29 2 185 251 141 207 1.74e-13 70.5
MsaG038683 AT5G07100.3 57.692 130 38 3 331 460 91 203 9.26e-40 145
MsaG038683 AT5G07100.3 70.000 70 20 1 182 250 21 90 1.03e-24 103
MsaG038683 AT5G07100.3 51.613 62 30 0 398 459 24 85 4.94e-14 72.0
MsaG038683 AT5G07100.3 54.412 68 29 2 185 251 141 207 1.74e-13 70.5
MsaG038683 AT5G07100.1 57.692 130 38 3 331 460 184 296 2.13e-39 147
MsaG038683 AT5G07100.1 47.967 123 56 3 131 250 66 183 1.66e-25 107
MsaG038683 AT5G07100.1 39.796 98 46 2 373 459 83 178 5.06e-14 73.9
MsaG038683 AT5G07100.1 54.412 68 29 2 185 251 234 300 8.17e-14 73.2
MsaG038683 AT2G03340.1 53.793 145 44 3 341 464 339 481 1.08e-37 147
MsaG038683 AT2G03340.1 57.447 94 38 1 182 273 247 340 5.15e-26 112
MsaG038683 AT2G03340.1 56.579 76 30 2 398 471 250 324 1.63e-17 86.7
MsaG038683 AT2G03340.1 58.333 60 24 1 185 243 415 474 1.17e-14 77.8
MsaG038683 AT4G12020.3 38.655 238 104 5 182 418 465 661 8.97e-36 145
MsaG038683 AT4G12020.3 50.820 61 29 1 397 457 467 526 7.19e-11 66.2
MsaG038683 AT4G12020.6 38.655 238 104 5 182 418 465 661 9.58e-36 145
MsaG038683 AT4G12020.6 50.820 61 29 1 397 457 467 526 7.11e-11 66.2
MsaG038683 AT4G12020.8 38.655 238 104 5 182 418 465 661 9.58e-36 145
MsaG038683 AT4G12020.8 50.820 61 29 1 397 457 467 526 7.11e-11 66.2
MsaG038683 AT4G12020.2 38.655 238 104 5 182 418 465 661 9.75e-36 145
MsaG038683 AT4G12020.2 50.820 61 29 1 397 457 467 526 7.26e-11 66.2
MsaG038683 AT4G12020.10 38.655 238 104 5 182 418 465 661 9.79e-36 145
MsaG038683 AT4G12020.10 50.820 61 29 1 397 457 467 526 7.18e-11 66.2
MsaG038683 AT4G12020.4 38.655 238 104 5 182 418 465 661 1.02e-35 145
MsaG038683 AT4G12020.4 50.820 61 29 1 397 457 467 526 7.31e-11 66.2
MsaG038683 AT4G12020.7 38.655 238 104 5 182 418 465 661 1.13e-35 145
MsaG038683 AT4G12020.7 50.820 61 29 1 397 457 467 526 7.57e-11 66.2
MsaG038683 AT4G12020.1 38.655 238 104 5 182 418 465 661 1.18e-35 145
MsaG038683 AT4G12020.1 50.820 61 29 1 397 457 467 526 7.84e-11 66.2
MsaG038683 AT4G12020.9 38.655 238 104 5 182 418 465 661 1.18e-35 145
MsaG038683 AT4G12020.9 50.820 61 29 1 397 457 467 526 7.84e-11 66.2
MsaG038683 AT4G12020.5 38.655 238 104 5 182 418 398 594 1.23e-35 145
MsaG038683 AT4G12020.5 50.820 61 29 1 397 457 400 459 8.26e-11 66.2
MsaG038683 AT3G01080.2 74.684 79 20 0 379 457 325 403 1.74e-35 140
MsaG038683 AT3G01080.2 59.770 87 35 0 182 268 202 288 2.06e-27 116
MsaG038683 AT3G01080.2 60.000 60 23 1 185 243 344 403 3.64e-15 79.0
MsaG038683 AT3G01080.2 55.556 63 27 1 398 460 205 266 2.84e-14 76.3
MsaG038683 AT3G01080.1 74.684 79 20 0 379 457 287 365 1.79e-35 139
MsaG038683 AT3G01080.1 59.770 87 35 0 182 268 164 250 2.93e-27 115
MsaG038683 AT3G01080.1 60.000 60 23 1 185 243 306 365 4.86e-15 78.2
MsaG038683 AT3G01080.1 55.556 63 27 1 398 460 167 228 3.22e-14 75.9
MsaG038683 AT4G12020.11 39.167 240 100 6 182 418 465 661 1.89e-35 144
MsaG038683 AT4G12020.11 50.820 61 29 1 397 457 467 526 9.64e-11 65.9
MsaG038683 AT2G30250.1 69.136 81 25 0 379 459 309 389 4.28e-33 132
MsaG038683 AT2G30250.1 62.338 77 26 1 181 254 162 238 4.74e-22 99.4
MsaG038683 AT2G30250.1 57.812 64 26 1 186 248 329 392 1.63e-14 76.3
MsaG038683 AT2G30250.1 45.570 79 37 2 379 457 152 224 2.91e-11 66.2
MsaG038683 AT1G55600.1 59.341 91 36 1 370 459 278 368 8.92e-29 120
MsaG038683 AT1G55600.1 57.627 59 24 1 186 243 308 366 2.14e-14 76.6
MsaG038683 AT3G01080.3 59.770 87 35 0 182 268 202 288 9.58e-29 117
MsaG038683 AT3G01080.3 53.030 66 30 1 398 463 205 269 5.49e-15 77.0
MsaG038683 AT2G44745.1 61.842 76 29 0 379 454 126 201 1.25e-28 114
MsaG038683 AT2G44745.1 52.000 75 25 2 185 258 145 209 2.02e-16 79.3
MsaG038683 AT4G30935.1 47.541 122 41 2 346 460 288 393 2.70e-26 113
MsaG038683 AT4G30935.1 48.810 84 41 2 173 254 318 401 3.56e-15 79.0
MsaG038683 AT4G30935.1 53.125 64 28 2 184 246 167 229 2.03e-13 73.6
MsaG038683 AT1G69310.4 48.598 107 50 1 355 456 99 205 5.46e-26 108
MsaG038683 AT1G69310.4 40.777 103 59 2 139 240 102 203 8.26e-17 82.0
MsaG038683 AT1G69310.2 48.598 107 50 1 355 456 99 205 5.46e-26 108
MsaG038683 AT1G69310.2 40.777 103 59 2 139 240 102 203 8.26e-17 82.0
MsaG038683 AT1G69310.1 48.598 107 50 1 355 456 99 205 5.46e-26 108
MsaG038683 AT1G69310.1 40.777 103 59 2 139 240 102 203 8.26e-17 82.0
MsaG038683 AT4G18170.1 47.273 110 48 1 359 458 123 232 1.06e-25 108
MsaG038683 AT4G18170.1 59.375 64 25 1 185 247 172 235 1.45e-16 81.6
MsaG038683 AT5G49520.1 61.842 76 29 0 382 457 205 280 1.63e-25 109
MsaG038683 AT5G49520.1 57.812 64 26 1 185 247 221 284 5.23e-16 81.3
MsaG038683 AT1G29860.1 58.974 78 32 0 382 459 120 197 2.16e-25 107
MsaG038683 AT1G29860.1 61.765 68 24 2 185 251 136 202 7.65e-18 84.7
MsaG038683 AT4G39410.1 53.488 86 40 0 369 454 194 279 2.25e-25 107
MsaG038683 AT4G39410.1 55.172 58 25 1 185 241 223 280 1.94e-14 75.1
MsaG038683 AT5G64810.1 59.155 71 29 0 385 455 97 167 6.54e-25 103
MsaG038683 AT5G64810.1 43.750 80 37 3 169 240 87 166 1.52e-11 64.3
MsaG038683 AT3G01970.1 57.500 80 34 0 385 464 52 131 8.49e-25 101
MsaG038683 AT3G01970.1 55.172 58 25 1 185 241 65 122 7.10e-15 72.8
MsaG038683 AT5G13080.1 54.878 82 36 1 385 465 54 135 2.36e-24 99.8
MsaG038683 AT5G13080.1 52.632 57 26 1 185 240 67 123 1.15e-13 69.3
MsaG038683 AT2G47260.1 57.895 76 32 0 382 457 158 233 1.20e-23 103
MsaG038683 AT2G47260.1 57.812 64 26 1 185 247 174 237 1.08e-16 82.4
MsaG038683 AT5G46350.1 54.545 77 35 0 384 460 169 245 1.58e-23 102
MsaG038683 AT5G46350.1 57.812 64 26 1 185 247 183 246 2.61e-16 81.3
MsaG038683 AT5G41570.1 56.579 76 33 0 379 454 79 154 1.61e-23 98.6
MsaG038683 AT5G41570.1 54.386 57 25 1 185 240 98 154 3.72e-14 71.6
MsaG038683 AT5G26170.1 54.286 70 32 0 385 454 100 169 2.51e-23 97.8
MsaG038683 AT5G26170.1 51.724 58 27 1 185 241 113 170 8.59e-14 70.5
MsaG038683 AT2G46130.1 56.579 76 33 0 379 454 11 86 2.51e-23 95.5
MsaG038683 AT2G46130.1 60.656 61 23 1 181 240 26 86 1.18e-17 79.3
MsaG038683 AT4G04450.2 45.045 111 51 2 353 462 162 263 7.91e-23 102
MsaG038683 AT4G04450.2 51.667 60 27 2 186 243 199 258 2.23e-12 70.1
MsaG038683 AT1G64000.1 55.263 76 34 0 379 454 95 170 1.17e-22 96.7
MsaG038683 AT1G64000.1 54.386 57 25 1 185 240 114 170 2.00e-14 72.8
MsaG038683 AT4G04450.1 48.421 95 48 1 369 462 263 357 3.42e-22 101
MsaG038683 AT4G04450.1 51.667 60 27 2 186 243 293 352 4.49e-12 69.3
MsaG038683 AT5G15130.2 51.282 78 37 1 381 457 168 245 6.40e-22 100
MsaG038683 AT5G15130.1 51.282 78 37 1 381 457 210 287 8.00e-22 100
MsaG038683 AT1G69310.3 45.794 107 49 2 355 456 99 201 2.01e-21 95.5
MsaG038683 AT1G69310.3 37.864 103 58 3 139 240 102 199 3.05e-12 68.2
MsaG038683 AT4G22070.4 52.564 78 36 1 381 457 280 357 2.40e-21 98.6
MsaG038683 AT4G22070.4 51.667 60 27 2 186 243 298 357 3.75e-12 69.7
MsaG038683 AT4G22070.3 52.564 78 36 1 381 457 280 357 2.40e-21 98.6
MsaG038683 AT4G22070.3 51.667 60 27 2 186 243 298 357 3.75e-12 69.7
MsaG038683 AT4G22070.2 52.564 78 36 1 381 457 280 357 2.40e-21 98.6
MsaG038683 AT4G22070.2 51.667 60 27 2 186 243 298 357 3.75e-12 69.7
MsaG038683 AT4G22070.1 52.564 78 36 1 381 457 280 357 2.40e-21 98.6
MsaG038683 AT4G22070.1 51.667 60 27 2 186 243 298 357 3.75e-12 69.7
MsaG038683 AT1G62300.1 52.564 78 36 1 381 457 295 372 2.50e-21 98.6
MsaG038683 AT1G62300.1 51.667 60 27 2 186 243 313 372 3.32e-12 70.1
MsaG038683 AT1G18860.1 47.619 84 43 1 375 457 216 299 2.94e-21 98.2
MsaG038683 AT2G21900.1 48.352 91 41 2 387 474 95 182 4.21e-21 92.4
MsaG038683 AT2G21900.1 48.333 60 30 1 185 243 109 168 6.09e-13 68.6
MsaG038683 AT1G68150.1 50.633 79 38 1 382 459 219 297 4.86e-21 95.9
MsaG038683 AT1G68150.1 49.206 63 30 2 183 243 233 295 9.96e-11 64.7
MsaG038683 AT4G01720.1 54.545 77 34 1 382 457 223 299 6.20e-21 97.1
MsaG038683 AT4G01720.1 50.769 65 30 2 181 243 235 299 1.35e-12 70.9
MsaG038683 AT4G23550.1 48.780 82 40 2 382 462 125 205 2.99e-19 89.7
MsaG038683 AT4G23550.1 47.887 71 33 3 186 254 141 209 1.20e-11 66.6
MsaG038683 AT3G62340.1 52.703 74 35 0 384 457 104 177 4.40e-19 88.6
MsaG038683 AT3G62340.1 48.718 78 37 2 185 259 118 195 3.37e-14 73.9
MsaG038683 AT4G31550.1 50.538 93 40 3 379 470 230 317 7.04e-19 88.6
MsaG038683 AT4G31550.2 50.538 93 40 3 379 470 229 316 7.14e-19 88.6
MsaG038683 AT2G46130.2 52.632 76 32 1 379 454 11 82 7.96e-19 82.8
MsaG038683 AT2G46130.2 55.738 61 22 2 181 240 26 82 3.39e-13 66.6
MsaG038683 AT2G23320.1 49.367 79 36 2 379 456 224 299 1.27e-18 87.8
MsaG038683 AT2G23320.1 49.275 69 30 3 178 241 230 298 1.15e-11 67.0
MsaG038683 AT4G24240.1 50.633 79 35 2 379 456 265 340 2.62e-18 87.4
MsaG038683 AT4G24240.1 51.724 58 26 2 186 241 282 339 4.87e-12 68.6
MsaG038683 AT2G24570.1 48.421 95 43 3 379 472 227 316 4.35e-18 86.3
MsaG038683 AT2G24570.1 40.909 88 42 4 163 240 213 300 6.48e-11 64.7
MsaG038683 AT1G80840.1 39.837 123 59 6 352 466 105 220 4.70e-18 85.9
MsaG038683 AT1G80840.1 49.180 61 29 2 185 243 146 206 2.32e-11 65.9
MsaG038683 AT5G28650.1 50.649 77 34 2 379 454 246 319 1.43e-17 85.1
MsaG038683 AT3G04670.1 50.649 77 34 2 379 454 246 319 3.92e-17 83.6
MsaG038683 AT2G25000.2 39.560 91 53 2 371 459 75 165 4.44e-17 81.3
MsaG038683 AT2G25000.2 50.000 66 31 2 183 246 101 166 4.05e-13 69.7
MsaG038683 AT2G25000.4 39.560 91 53 2 371 459 75 165 4.44e-17 81.3
MsaG038683 AT2G25000.4 50.000 66 31 2 183 246 101 166 4.05e-13 69.7
MsaG038683 AT2G25000.3 39.560 91 53 2 371 459 97 187 5.49e-17 81.6
MsaG038683 AT2G25000.3 50.000 66 31 2 183 246 123 188 5.37e-13 69.7
MsaG038683 AT2G25000.1 39.560 91 53 2 371 459 118 208 1.08e-16 81.3
MsaG038683 AT2G25000.1 50.000 66 31 2 183 246 144 209 9.08e-13 69.7
MsaG038683 AT2G30590.1 49.351 77 35 2 379 454 297 370 3.05e-16 81.6
MsaG038683 AT2G30590.1 50.847 59 27 2 186 242 314 372 6.88e-11 65.1
MsaG038683 AT4G31800.2 32.824 131 72 4 397 524 110 227 3.11e-16 79.3
MsaG038683 AT4G31800.2 38.043 92 49 3 183 272 109 194 1.63e-11 65.5
MsaG038683 AT4G31800.1 32.824 131 72 4 397 524 175 292 6.33e-16 79.7
MsaG038683 AT4G31800.1 45.455 66 34 2 183 246 174 239 2.96e-11 65.5
MsaG038683 AT5G43290.1 55.932 59 26 0 396 454 112 170 6.40e-16 79.0
MsaG038683 AT5G43290.1 60.345 58 22 1 184 240 113 170 3.24e-13 70.9
MsaG038683 AT1G30650.1 40.000 100 53 2 363 461 188 281 1.57e-15 79.7
MsaG038683 AT1G30650.1 45.714 70 36 2 176 243 208 277 4.81e-12 68.9
MsaG038683 AT2G34830.1 40.000 100 53 2 363 461 186 279 1.70e-15 79.7
MsaG038683 AT2G34830.1 47.143 70 35 2 176 243 206 275 2.58e-12 69.7
MsaG038683 AT2G34830.2 40.000 100 53 2 363 461 195 288 1.79e-15 79.7
MsaG038683 AT2G34830.2 47.143 70 35 2 176 243 215 284 2.83e-12 69.7
MsaG038683 AT4G01250.1 52.308 65 30 1 399 462 129 193 2.22e-15 77.8
MsaG038683 AT4G01250.1 42.667 75 41 2 171 243 114 188 3.03e-13 71.2
MsaG038683 AT1G69810.2 43.750 80 43 2 380 457 127 206 6.88e-15 77.0
MsaG038683 AT1G69810.1 43.750 80 43 2 380 457 185 264 1.28e-14 76.6
MsaG038683 AT5G52830.1 40.476 84 48 2 379 461 147 229 1.87e-14 75.9
MsaG038683 AT5G52830.1 44.000 75 40 2 171 243 151 225 8.22e-14 73.9
MsaG038683 AT1G29280.1 51.667 60 28 1 399 457 75 134 4.35e-14 73.2
MsaG038683 AT1G29280.1 40.909 88 47 3 164 246 50 137 8.97e-13 69.3
MsaG038683 AT3G58710.1 46.970 66 34 1 399 463 72 137 2.28e-13 71.2
MsaG038683 AT3G58710.1 52.381 63 28 2 186 246 72 134 1.14e-11 66.2
MsaG038683 AT3G58710.2 46.970 66 34 1 399 463 71 136 2.40e-13 71.2
MsaG038683 AT3G58710.2 52.381 63 28 2 186 246 71 133 1.15e-11 66.2
MsaG038683 AT5G45050.4 50.000 64 31 1 399 461 1042 1105 2.22e-12 71.2
MsaG038683 AT5G45050.1 50.000 64 31 1 399 461 1181 1244 2.27e-12 71.2
MsaG038683 AT5G45050.2 50.000 64 31 1 399 461 1153 1216 2.29e-12 71.2
MsaG038683 AT5G24110.1 32.540 126 72 3 331 452 54 170 3.62e-12 68.2
MsaG038683 AT5G24110.1 35.294 102 56 4 178 275 106 201 7.59e-11 64.3
MsaG038683 AT4G23810.1 45.763 59 28 2 185 239 158 216 3.05e-11 65.9
MsaG038683 AT1G66560.1 38.043 92 54 1 398 486 103 194 3.28e-11 64.7
MsaG038683 AT2G40740.1 45.763 59 28 2 185 239 173 231 5.11e-11 64.7
MsaG038683 AT2G40740.3 45.763 59 28 2 185 239 182 240 6.86e-11 64.3

Find 170 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGAGTTTCAGATTTC+GGG 0.203701 7:+79494544 None:intergenic
TATTGGTATGTCAACATTAT+TGG 0.239492 7:+79496032 None:intergenic
GTTTGATGAGTTTCAGATTT+CGG 0.254970 7:+79494543 None:intergenic
CATAGCTATACCTGAGAATT+AGG 0.259378 7:+79498131 None:intergenic
GGTAGTGGCATTTGAAATTC+AGG 0.262454 7:+79494306 None:intergenic
TTCAGTAATGATATGAAGTT+TGG 0.263341 7:-79494450 MsaT038683.1:CDS
TTTCTACAATGATGTGAAAA+TGG 0.292928 7:-79496076 MsaT038683.1:CDS
TCACCTCCTGTTTAGGCCTT+AGG 0.295087 7:+79494160 None:intergenic
TTGAATAATATCGTACCTTA+TGG 0.296520 7:-79494393 MsaT038683.1:CDS
TGTCGATGTCACTCTCAATT+TGG 0.305735 7:+79495170 None:intergenic
GGTTATAATTGGAGAAAATA+TGG 0.316760 7:-79495871 MsaT038683.1:CDS
CCTCAGAGGATGGTTATAAT+TGG 0.317341 7:-79495882 MsaT038683.1:CDS
AACTCTATCACATGTTTCAT+TGG 0.321359 7:+79495642 None:intergenic
CAAGCATTTGGCTGTCTCTA+TGG 0.322245 7:+79496178 None:intergenic
GGTTATCGCTGGCGAAAGTA+TGG 0.322826 7:-79495136 MsaT038683.1:CDS
CTTCCACCTCTCACCGATAA+AGG 0.327409 7:-79497320 MsaT038683.1:CDS
TTCTGGTGTGACCGAGCTTT+CGG 0.327466 7:-79495521 MsaT038683.1:CDS
GCTTCTTCGGAACGAGATAT+TGG 0.333272 7:+79496015 None:intergenic
TTGCATGACACTTTGATAGA+TGG 0.340036 7:+79494056 None:intergenic
AGAGTAATTCATTTGAGATA+TGG 0.343917 7:+79494419 None:intergenic
TCTTCCTTCACCTCCTGTTT+AGG 0.345858 7:+79494153 None:intergenic
TAAGACTGGATAGAACTTAT+AGG 0.357131 7:+79494222 None:intergenic
AGTGAGCATTGATCCTTTAT+CGG 0.357605 7:+79497307 None:intergenic
TCAAACATACCTTGAGATCT+AGG 0.358164 7:+79495484 None:intergenic
GAAAGGACATCCCCGCCTTC+TGG 0.360890 7:-79495538 MsaT038683.1:CDS
GTTGACCTTGGACAAGCATT+TGG 0.366107 7:+79496166 None:intergenic
AGGAAATCATTGCTAAAATC+AGG 0.366912 7:+79494495 None:intergenic
CAGTATGACTACCTTGGGTT+TGG 0.373123 7:+79495091 None:intergenic
GCTTTCATCGCTAGCTTCTT+CGG 0.373821 7:+79496002 None:intergenic
TGATTTAGAGAAGCAAAATA+TGG 0.379373 7:+79497179 None:intergenic
TAATTGTCAGGTCAAGAAAA+AGG 0.382108 7:-79495791 MsaT038683.1:CDS
TGACCATCAGGCTTCCGTTC+CGG 0.387243 7:+79495562 None:intergenic
TGTAAATAATTTCCGTTATG+TGG 0.389276 7:+79495749 None:intergenic
ATTGAAAGAGGCAGCAAAAT+CGG 0.394440 7:+79497241 None:intergenic
GGAGGCACCATTGTTTCAAC+CGG 0.405642 7:+79495223 None:intergenic
TGAGGCACAGCAACATGGTC+AGG 0.414902 7:+79494354 None:intergenic
TCAGGGAACATTGAAGCAAT+AGG 0.417080 7:+79494324 None:intergenic
GATGTCCTTTCTTGACCATC+AGG 0.421209 7:+79495550 None:intergenic
GTACATTTGTAGTAGCTTCT+CGG 0.422894 7:+79495820 None:intergenic
CATAACGGAAATTATTTACA+AGG 0.429706 7:-79495746 MsaT038683.1:CDS
CCGCTGAATCTTCCCTCGTC+TGG 0.431459 7:-79494285 MsaT038683.1:CDS
TCTATCCACAGCGAGGATAT+CGG 0.433052 7:-79495964 MsaT038683.1:CDS
AGGATTCCTAAGGCCTAAAC+AGG 0.434441 7:-79494166 MsaT038683.1:CDS
TCTGACATCTCATCACTAGA+AGG 0.437129 7:+79495676 None:intergenic
CATCATGCTTCCTAATTCTC+AGG 0.441453 7:-79498141 None:intergenic
TTTCCTGAGATCAAGTTTGA+TGG 0.447215 7:-79494478 MsaT038683.1:CDS
TTCCCATCAAACTTGATCTC+AGG 0.452776 7:+79494475 None:intergenic
ATCGTACCTTATGGCGCCTA+CGG 0.456777 7:-79494384 MsaT038683.1:CDS
CATATAAGCTCAAGTGATGT+TGG 0.463036 7:-79494612 MsaT038683.1:CDS
TTTCAAGCATCAAGCCAACT+TGG 0.464739 7:-79497219 MsaT038683.1:CDS
AGTTTCAGATTTCGGGATAA+CGG 0.468830 7:+79494551 None:intergenic
CAGTTGAGGGATACGGATAC+AGG 0.470281 7:-79494186 MsaT038683.1:CDS
GACTATTTAGCTAGAAATAG+TGG 0.470303 7:-79496105 MsaT038683.1:CDS
TGAGATCTAGGTCTCTTCAT+AGG 0.476275 7:+79495496 None:intergenic
GAGTTGATGCTGATTCGGTA+TGG 0.476961 7:-79495624 MsaT038683.1:CDS
TCTGGAAATTATTCTCTAGC+TGG 0.487569 7:-79494267 MsaT038683.1:CDS
TACTACAAATGCACAAGTGC+TGG 0.487847 7:-79494744 MsaT038683.1:CDS
AATAATCGCCACATGATGAA+TGG 0.488188 7:-79496204 MsaT038683.1:CDS
TCTTTCAGAACAGCAGTTGA+GGG 0.490698 7:-79494199 MsaT038683.1:CDS
ATGTACTCAGTCTAATTGTC+AGG 0.492995 7:-79495803 MsaT038683.1:CDS
GCCATGCCATCTCCCACCAC+TGG 0.493365 7:-79497356 MsaT038683.1:CDS
GCTCGGTCACACCAGAAGGC+GGG 0.493635 7:+79495527 None:intergenic
CTCGTTCCGTAGGCGCCATA+AGG 0.497900 7:+79494378 None:intergenic
GAGGGAAGATTCAGCGGTAG+TGG 0.498326 7:+79494291 None:intergenic
AGTTGATGCTGATTCGGTAT+GGG 0.506033 7:-79495623 MsaT038683.1:CDS
CCCAGTGGTGGGAGATGGCA+TGG 0.508327 7:+79497355 None:intergenic
CATGTTGCTGTGCCTCAAAC+CGG 0.509559 7:-79494348 MsaT038683.1:CDS
TCCGCACTTGCTAATCATGA+TGG 0.511029 7:-79495436 MsaT038683.1:CDS
CTCGGTCACACCAGAAGGCG+GGG 0.511365 7:+79495528 None:intergenic
ATCTTTCAGAACAGCAGTTG+AGG 0.511554 7:-79494200 MsaT038683.1:CDS
AGAACAGCAGTTGAGGGATA+CGG 0.511859 7:-79494193 MsaT038683.1:CDS
AAAGAGATGTCTCATGCAGC+AGG 0.514802 7:-79495913 MsaT038683.1:CDS
GTAATTCATTTGAGATATGG+AGG 0.515886 7:+79494422 None:intergenic
GAACATTGAAGCAATAGGTC+CGG 0.520397 7:+79494329 None:intergenic
AAAAGATGCAAAACACAATC+CGG 0.525621 7:-79495581 MsaT038683.1:CDS
ACTTGTGCTAATGTCATACC+TGG 0.526504 7:-79494579 MsaT038683.1:CDS
ATAAGGTACGATATTATTCA+AGG 0.528215 7:+79494395 None:intergenic
TGATAGAGTTGATGCTGATT+CGG 0.531857 7:-79495629 MsaT038683.1:CDS
TTCCTGAGATCAAGTTTGAT+GGG 0.534001 7:-79494477 MsaT038683.1:CDS
CGTGGCTCACGAACAGCCCT+CGG 0.534449 7:+79495202 None:intergenic
TGTAAGGAAACATGTGGAAA+GGG 0.535870 7:-79494715 MsaT038683.1:CDS
GAAGCAATAGGTCCGGTTTG+AGG 0.537161 7:+79494336 None:intergenic
AATCTAACAGCTGTTGACCT+TGG 0.538725 7:+79496154 None:intergenic
AGGTGATAGGACTGCTTGAG+TGG 0.539838 7:+79495399 None:intergenic
AAACTCCCAGTGGTGGGAGA+TGG 0.543217 7:+79497350 None:intergenic
ATGGTCAGGGCTCGTTCCGT+AGG 0.545788 7:+79494368 None:intergenic
TGATTGTTATTTCTAGCAGC+GGG 0.546461 7:+79494633 None:intergenic
ATGGGGAAACATTCAGTCAC+GGG 0.549649 7:-79495605 MsaT038683.1:CDS
TTCGGGATAACGGCACTCCC+AGG 0.553471 7:+79494561 None:intergenic
GAAAGCTCGGTCACACCAGA+AGG 0.555063 7:+79495523 None:intergenic
TGAAACAATGGTGCCTCCGA+GGG 0.555751 7:-79495218 MsaT038683.1:CDS
ATGGATTGTGATGGTGATGG+TGG 0.556176 7:+79494075 None:intergenic
GCTGTTCTGAAAGATAAGAC+TGG 0.557569 7:+79494208 None:intergenic
ATGGACAGAAGGTTGTCAAA+GGG 0.557821 7:-79495117 MsaT038683.1:CDS
TATGGACAGAAGGTTGTCAA+AGG 0.558376 7:-79495118 MsaT038683.1:CDS
GCAAGTGCGGAAGAATGCTC+CGG 0.559225 7:+79495448 None:intergenic
ATGAAGAGACCTAGATCTCA+AGG 0.562206 7:-79495493 MsaT038683.1:CDS
CCATGCCATCTCCCACCACT+GGG 0.562868 7:-79497355 MsaT038683.1:CDS
CTGTAAGGAAACATGTGGAA+AGG 0.563556 7:-79494716 MsaT038683.1:CDS
ATCACACGATGGCCACATAA+CGG 0.564048 7:-79495761 MsaT038683.1:CDS
CTTCATAGGATCCGAAAGCT+CGG 0.566780 7:+79495510 None:intergenic
TTCATTTGAGATATGGAGGA+AGG 0.567196 7:+79494426 None:intergenic
AATCATGATGGTGATAAAGA+TGG 0.568832 7:-79495424 MsaT038683.1:CDS
TTGATGCTTGAAATTGAAAG+AGG 0.571978 7:+79497229 None:intergenic
CCGACTCAGAATCGAAAAGA+AGG 0.573175 7:-79495357 MsaT038683.1:intron
GGAAGCCTGATGGTCAAGAA+AGG 0.575058 7:-79495555 MsaT038683.1:CDS
TACTTGATGATGGTTATCGC+TGG 0.577842 7:-79495147 MsaT038683.1:CDS
GAGCTACCCGGTTGAAACAA+TGG 0.579050 7:-79495230 MsaT038683.1:CDS
AAGGCCTAAACAGGAGGTGA+AGG 0.581032 7:-79494157 MsaT038683.1:CDS
GTTGATGCTGATTCGGTATG+GGG 0.581080 7:-79495622 MsaT038683.1:CDS
CATGGCGAAACTCCCAGTGG+TGG 0.585546 7:+79497343 None:intergenic
AGCTCGGTCACACCAGAAGG+CGG 0.590554 7:+79495526 None:intergenic
GACATCGACATACTTGATGA+TGG 0.592578 7:-79495157 MsaT038683.1:CDS
TAAAGAATCAGCATCCAAGT+TGG 0.592884 7:+79497205 None:intergenic
ATCGGTGAGAGGTGGAAGCA+TGG 0.593312 7:+79497325 None:intergenic
TGGTGATGGTGGAGTGAGTG+AGG 0.594303 7:+79494086 None:intergenic
GTAGTGGCATTTGAAATTCA+GGG 0.594462 7:+79494307 None:intergenic
GCAGCAAAATCGGAGGCGGT+AGG 0.601703 7:+79497251 None:intergenic
CTGGCGAAAGTATGGACAGA+AGG 0.605120 7:-79495128 MsaT038683.1:CDS
GACAGCCAAATGCTTGTCCA+AGG 0.609238 7:-79496171 MsaT038683.1:CDS
AATCCGGAACGGAAGCCTGA+TGG 0.610044 7:-79495565 MsaT038683.1:CDS
CAGGAAGAAGGAGAGCTACC+CGG 0.610711 7:-79495242 MsaT038683.1:CDS
ATTGATCCTTTATCGGTGAG+AGG 0.611882 7:+79497314 None:intergenic
CGGTTTGAGGCACAGCAACA+TGG 0.612571 7:+79494349 None:intergenic
GATCCTCGACGACTTGAATG+TGG 0.613945 7:+79495703 None:intergenic
TTGAAACAATGGTGCCTCCG+AGG 0.614479 7:-79495219 MsaT038683.1:CDS
TATGGCCTCCATTCATCATG+TGG 0.615786 7:+79496196 None:intergenic
ATACGGATACAGGATTCCTA+AGG 0.616545 7:-79494176 MsaT038683.1:CDS
ATGATTGTTATTTCTAGCAG+CGG 0.617233 7:+79494632 None:intergenic
GGAGCAAAGACCTCAGAGGA+TGG 0.618094 7:-79495892 MsaT038683.1:CDS
ACCATCATGATTAGCAAGTG+CGG 0.620117 7:+79495435 None:intergenic
ATGGCGAAACTCCCAGTGGT+GGG 0.623491 7:+79497344 None:intergenic
CAAGTGCTGGATGTACTGTA+AGG 0.624268 7:-79494731 MsaT038683.1:CDS
GGCTGTTCGTGAGCCACGAG+TGG 0.628689 7:-79495197 MsaT038683.1:CDS
GATCCTTTATCGGTGAGAGG+TGG 0.628888 7:+79497317 None:intergenic
GAGGCACAGCAACATGGTCA+GGG 0.632363 7:+79494355 None:intergenic
GTATGTTCTTACAACTTACG+AGG 0.634084 7:-79494676 MsaT038683.1:CDS
AGAGAATAATTTCCAGACGA+GGG 0.634992 7:+79494273 None:intergenic
CAAACATGAACAAAAGAATG+TGG 0.636398 7:-79497279 MsaT038683.1:CDS
TATGGGGAAACATTCAGTCA+CGG 0.641335 7:-79495606 MsaT038683.1:CDS
AGAGGCAGCAAAATCGGAGG+CGG 0.642578 7:+79497247 None:intergenic
TCAAAGGGAATCCAAACCCA+AGG 0.645747 7:-79495102 MsaT038683.1:intron
ATTCCTAAGGCCTAAACAGG+AGG 0.646953 7:-79494163 MsaT038683.1:CDS
ATAACGGAAATTATTTACAA+GGG 0.647125 7:-79495745 MsaT038683.1:CDS
GGTACTAGCATGATCAAGAG+AGG 0.647818 7:+79494107 None:intergenic
CCAGACGAGGGAAGATTCAG+CGG 0.648317 7:+79494285 None:intergenic
GAGGCACCATTGTTTCAACC+GGG 0.651098 7:+79495224 None:intergenic
TAGAGAATAATTTCCAGACG+AGG 0.653085 7:+79494272 None:intergenic
TTCTAGCAGCGGGAACCTCG+TGG 0.654449 7:+79494643 None:intergenic
CTTTGATAGATGGATTGTGA+TGG 0.656305 7:+79494066 None:intergenic
TATGTTCTTACAACTTACGA+GGG 0.664748 7:-79494675 MsaT038683.1:CDS
ATGCAAAACACAATCCGGAA+CGG 0.666000 7:-79495576 MsaT038683.1:CDS
AATCGCCACATGATGAATGG+AGG 0.666150 7:-79496201 MsaT038683.1:CDS
GTACTAGCATGATCAAGAGA+GGG 0.667619 7:+79494108 None:intergenic
TCAATTTGGACTACCACTCG+TGG 0.680300 7:+79495184 None:intergenic
ATGTACTGTAAGGAAACATG+TGG 0.681433 7:-79494721 MsaT038683.1:CDS
CTTGTGCTAATGTCATACCT+GGG 0.683398 7:-79494578 MsaT038683.1:CDS
TAGATGGATTGTGATGGTGA+TGG 0.685096 7:+79494072 None:intergenic
GTTTGAATCAGACAACACTC+CGG 0.691002 7:-79495467 MsaT038683.1:CDS
GGCTCACGAACAGCCCTCGG+AGG 0.693320 7:+79495205 None:intergenic
GTTGTCCGATATCCTCGCTG+TGG 0.696608 7:+79495959 None:intergenic
AAACCACATTCAAGTCGTCG+AGG 0.698909 7:-79495706 MsaT038683.1:CDS
TGAAAATTCTATCCACAGCG+AGG 0.700419 7:-79495971 MsaT038683.1:CDS
GAAAGAGGCAGCAAAATCGG+AGG 0.705593 7:+79497244 None:intergenic
CCAATTATAACCATCCTCTG+AGG 0.711388 7:+79495882 None:intergenic
AGCAGGAGCAAAGACCTCAG+AGG 0.736011 7:-79495896 MsaT038683.1:CDS
TGGGGAAACATTCAGTCACG+GGG 0.749880 7:-79495604 MsaT038683.1:CDS
CGAGGGAAAACATAACCACG+AGG 0.754213 7:-79494658 MsaT038683.1:CDS
AAGCATGGCGAAACTCCCAG+TGG 0.775229 7:+79497340 None:intergenic
AAGGTGGAAAGATCACACGA+TGG 0.778917 7:-79495772 MsaT038683.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 79494041 79498159 79494041 ID=MsaG038683
Chr7 mRNA 79494041 79498159 79494041 ID=MsaT038683.1;Parent=MsaG038683
Chr7 exon 79494041 79494770 79494041 ID=MsaT038683.1.exon5;Parent=MsaT038683.1
Chr7 CDS 79494041 79494770 79494041 ID=cds.MsaT038683.1;Parent=MsaT038683.1
Chr7 exon 79495103 79495261 79495103 ID=MsaT038683.1.exon4;Parent=MsaT038683.1
Chr7 CDS 79495103 79495261 79495103 ID=cds.MsaT038683.1;Parent=MsaT038683.1
Chr7 exon 79495358 79496232 79495358 ID=MsaT038683.1.exon3;Parent=MsaT038683.1
Chr7 CDS 79495358 79496232 79495358 ID=cds.MsaT038683.1;Parent=MsaT038683.1
Chr7 exon 79497178 79497378 79497178 ID=MsaT038683.1.exon2;Parent=MsaT038683.1
Chr7 CDS 79497178 79497378 79497178 ID=cds.MsaT038683.1;Parent=MsaT038683.1
Chr7 exon 79498142 79498159 79498142 ID=MsaT038683.1.exon1;Parent=MsaT038683.1
Chr7 CDS 79498142 79498159 79498142 ID=cds.MsaT038683.1;Parent=MsaT038683.1
Gene Sequence

>MsaT038683.1

ATGCTTCCTAATTCTCAGGCCATGCCATCTCCCACCACTGGGAGTTTCGCCATGCTTCCACCTCTCACCGATAAAGGATCAATGCTCACTTCTGTCAAACATGAACAAAAGAATGTGGATGTGCCTACCGCCTCCGATTTTGCTGCCTCTTTCAATTTCAAGCATCAAGCCAACTTGGATGCTGATTCTTTATCTCCATATTTTGCTTCTCTAAATCAGGTTTCTAATAATCGCCACATGATGAATGGAGGCCATAGAGACAGCCAAATGCTTGTCCAAGGTCAACAGCTGTTAGATTTTTCATTCCCACAAGGTTTTTCAAGTGACTATTTAGCTAGAAATAGTGGAGTCCATTTCTACAATGATGTGAAAATGGTAGATGATGTGATTGTCAACACCAATAATGTTGACATACCAATATCTCGTTCCGAAGAAGCTAGCGATGAAAGCACTCTGCCTGAAAATTCTATCCACAGCGAGGATATCGGACAACATCATGTCTTAGAAGCAGAACAGAAAGAGATGTCTCATGCAGCAGGAGCAAAGACCTCAGAGGATGGTTATAATTGGAGAAAATATGGCCAAAAACAAGTAAAAGGTAGTGAATATCCGAGAAGCTACTACAAATGTACTCAGTCTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCACACGATGGCCACATAACGGAAATTATTTACAAGGGTAATCATAACCATGCAAAACCACATTCAAGTCGTCGAGGATCAGTACCTTCTAGTGATGAGATGTCAGAAAATGCTGAAGCCAATGAAACATGTGATAGAGTTGATGCTGATTCGGTATGGGGAAACATTCAGTCACGGGGAAAAGATGCAAAACACAATCCGGAACGGAAGCCTGATGGTCAAGAAAGGACATCCCCGCCTTCTGGTGTGACCGAGCTTTCGGATCCTATGAAGAGACCTAGATCTCAAGGTATGTTTGAATCAGACAACACTCCGGAGCATTCTTCCGCACTTGCTAATCATGATGGTGATAAAGATGGAGCCACTCAAGCAGTCCTATCACCTGAAAACAATTCTGAAGATGCCGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGTTGAAACAATGGTGCCTCCGAGGGCTGTTCGTGAGCCACGAGTGGTAGTCCAAATTGAGAGTGACATCGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTACTGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTAAAGTATGTTCTTACAACTTACGAGGGAAAACATAACCACGAGGTTCCCGCTGCTAGAAATAACAATCATATAAGCTCAAGTGATGTTGGTTTATCTTCTACTTGTGCTAATGTCATACCTGGGAGTGCCGTTATCCCGAAATCTGAAACTCATCAAACTCTTCCATCTCATTTTGATAGAAAACCTGATTTTAGCAATGATTTCCTGAGATCAAGTTTGATGGGAAGTTTCAGTAATGATATGAAGTTTGGACCTTCCTCCATATCTCAAATGAATTACTCTTCCTTGAATAATATCGTACCTTATGGCGCCTACGGAACGAGCCCTGACCATGTTGCTGTGCCTCAAACCGGACCTATTGCTTCAATGTTCCCTGAATTTCAAATGCCACTACCGCTGAATCTTCCCTCGTCTGGAAATTATTCTCTAGCTGGAATTAATTTTAATTATGCAAGACCTATAAGTTCTATCCAGTCTTATCTTTCAGAACAGCAGTTGAGGGATACGGATACAGGATTCCTAAGGCCTAAACAGGAGGTGAAGGAAGAATCTTCATATGCTGCATGTGCACCCTCTCTTGATCATGCTAGTACCTCACTCACTCCACCATCACCATCACAATCCATCTATCAAAGTGTCATGCAAAATTTCCCTTCATAA
Protein sequence

>MsaT038683.1

MLPNSQAMPSPTTGSFAMLPPLTDKGSMLTSVKHEQKNVDVPTASDFAASFNFKHQANLDADSLSPYFASLNQVSNNRHMMNGGHRDSQMLVQGQQLLDFSFPQGFSSDYLARNSGVHFYNDVKMVDDVIVNTNNVDIPISRSEEASDESTLPENSIHSEDIGQHHVLEAEQKEMSHAAGAKTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQSNCQVKKKVERSHDGHITEIIYKGNHNHAKPHSSRRGSVPSSDEMSENAEANETCDRVDADSVWGNIQSRGKDAKHNPERKPDGQERTSPPSGVTELSDPMKRPRSQGMFESDNTPEHSSALANHDGDKDGATQAVLSPENNSEDADSESKRRKKESYPVETMVPPRAVREPRVVVQIESDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVLTTYEGKHNHEVPAARNNNHISSSDVGLSSTCANVIPGSAVIPKSETHQTLPSHFDRKPDFSNDFLRSSLMGSFSNDMKFGPSSISQMNYSSLNNIVPYGAYGTSPDHVAVPQTGPIASMFPEFQMPLPLNLPSSGNYSLAGINFNYARPISSIQSYLSEQQLRDTDTGFLRPKQEVKEESSYAACAPSLDHASTSLTPPSPSQSIYQSVMQNFPS*