AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG038810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038810 MtrunA17_Chr7g0250631 96.846 761 24 0 1 761 1 761 0.0 1523
MsaG038810 MtrunA17_Chr8g0335351 77.232 773 162 7 1 761 1 771 0.0 1182
MsaG038810 MtrunA17_Chr2g0290691 67.197 503 141 7 270 761 115 604 0.0 684
MsaG038810 MtrunA17_Chr7g0227331 64.694 490 142 7 282 761 150 618 0.0 624
MsaG038810 MtrunA17_Chr6g0449401 58.077 520 159 6 281 761 180 679 0.0 609
MsaG038810 MtrunA17_Chr7g0266031 58.798 466 177 7 259 714 383 843 0.0 551
MsaG038810 MtrunA17_Chr1g0179101 58.599 471 174 9 299 761 402 859 0.0 548
MsaG038810 MtrunA17_Chr2g0309421 58.811 471 163 10 302 761 121 571 0.0 533
MsaG038810 MtrunA17_Chr8g0356291 58.986 434 167 7 334 761 96 524 1.40e-179 524
MsaG038810 MtrunA17_Chr3g0080101 63.104 393 136 4 329 715 380 769 3.51e-178 530
MsaG038810 MtrunA17_Chr4g0063311 53.500 400 162 6 335 714 62 457 5.18e-144 431
MsaG038810 MtrunA17_Chr2g0321101 52.083 384 148 5 344 707 67 434 6.46e-128 389
MsaG038810 MtrunA17_Chr2g0285711 47.332 431 194 6 297 714 15 425 1.65e-124 380
MsaG038810 MtrunA17_Chr8g0381091 48.072 389 172 5 339 714 52 423 2.05e-120 369
MsaG038810 MtrunA17_Chr2g0312641 46.635 416 176 11 311 713 37 419 4.53e-113 351
MsaG038810 MtrunA17_Chr8g0369091 43.396 424 186 6 305 718 528 907 1.55e-110 358
MsaG038810 MtrunA17_Chr4g0030361 43.069 404 182 3 315 717 257 613 2.71e-108 344
MsaG038810 MtrunA17_Chr2g0327561 45.274 402 183 3 327 727 588 953 3.88e-105 344
MsaG038810 MtrunA17_Chr8g0338741 39.481 385 184 11 357 720 11 367 2.74e-78 258
MsaG038810 MtrunA17_Chr4g0032761 38.441 372 199 8 361 714 10 369 5.39e-72 241
MsaG038810 MtrunA17_Chr2g0329011 39.776 357 179 8 360 714 11 333 1.64e-70 236
MsaG038810 MtrunA17_Chr7g0234641 37.260 365 200 9 361 715 8 353 6.35e-67 228
MsaG038810 MtrunA17_Chr6g0478601 34.311 341 180 7 363 702 108 405 7.74e-53 191
MsaG038810 MtrunA17_Chr5g0428981 32.658 395 205 8 309 702 722 1056 1.81e-52 197
MsaG038810 MtrunA17_Chr4g0018201 32.405 395 206 8 309 702 718 1052 3.62e-52 196
MsaG038810 MtrunA17_Chr3g0135951 31.043 422 241 14 354 759 82 469 1.22e-50 185
MsaG038810 MtrunA17_Chr1g0153321 33.708 356 197 8 354 705 96 416 1.61e-50 185
MsaG038810 MtrunA17_Chr1g0187581 32.405 395 218 11 354 738 105 460 6.94e-49 181
MsaG038810 MtrunA17_Chr1g0183651 29.356 419 244 12 354 760 108 486 1.27e-45 172
MsaG038810 MtrunA17_Chr1g0167351 30.809 383 223 9 354 729 98 445 1.75e-45 171
MsaG038810 MtrunA17_Chr7g0261491 29.882 425 239 12 354 760 108 491 2.70e-45 171
MsaG038810 MtrunA17_Chr1g0167311 31.967 366 209 10 354 715 103 432 1.32e-43 165
MsaG038810 MtrunA17_Chr2g0299781 29.517 393 240 8 354 738 101 464 4.29e-42 160
MsaG038810 MtrunA17_Chr1g0197721 33.981 206 131 4 352 556 37 238 1.32e-27 117
MsaG038810 MtrunA17_Chr1g0197721 34.426 122 77 2 593 713 215 334 4.76e-12 69.3
MsaG038810 MtrunA17_Chr7g0245031 38.889 162 91 2 358 513 134 293 1.12e-26 114
MsaG038810 MtrunA17_Chr7g0245031 43.363 113 61 2 591 702 299 409 3.35e-20 94.7
MsaG038810 MtrunA17_Chr4g0059751 37.654 162 88 3 361 513 84 241 2.18e-25 109
MsaG038810 MtrunA17_Chr4g0059751 37.719 114 68 2 591 703 247 358 8.75e-21 95.9
MsaG038810 MtrunA17_Chr8g0351491 25.072 347 174 9 355 698 5 268 1.76e-19 89.4
MsaG038810 MtrunA17_Chr2g0286501 26.446 363 184 11 363 724 46 326 9.85e-19 91.7
MsaG038810 MtrunA17_Chr3g0140631 33.553 152 99 1 363 514 34 183 1.56e-18 87.0
MsaG038810 MtrunA17_Chr3g0140631 34.259 108 67 1 590 697 185 288 4.22e-14 73.9
MsaG038810 MtrunA17_Chr3g0125381 36.607 112 67 1 587 698 100 207 2.25e-18 84.7
MsaG038810 MtrunA17_Chr3g0107011 30.000 190 121 3 360 549 8 185 4.70e-18 87.8
MsaG038810 MtrunA17_Chr4g0013131 33.121 157 102 1 357 513 3 156 7.28e-18 87.4
MsaG038810 MtrunA17_Chr8g0379091 24.847 326 171 7 360 684 20 272 9.03e-17 84.3
MsaG038810 MtrunA17_Chr3g0107051 32.749 171 110 2 366 534 21 188 3.26e-16 82.0
MsaG038810 MtrunA17_Chr5g0432471 31.126 151 101 2 363 513 9 156 3.53e-16 82.0
MsaG038810 MtrunA17_Chr3g0114511 31.953 169 103 3 358 526 24 180 3.58e-16 82.0
MsaG038810 MtrunA17_Chr7g0244521 32.258 155 102 2 359 513 5 156 5.10e-16 81.6
MsaG038810 MtrunA17_Chr1g0205421 28.351 194 127 3 357 550 3 184 6.88e-16 80.9
MsaG038810 MtrunA17_Chr8g0353621 31.013 158 107 1 358 515 2 157 7.18e-16 78.6
MsaG038810 MtrunA17_Chr2g0284031 31.551 187 116 4 360 546 25 199 8.66e-16 81.3
MsaG038810 MtrunA17_Chr4g0025671 28.947 152 106 2 363 513 5 155 2.31e-15 80.5
MsaG038810 MtrunA17_Chr2g0321841 28.289 152 107 2 363 513 1 151 2.53e-15 80.5
MsaG038810 MtrunA17_Chr6g0486661 32.374 139 86 4 593 726 912 1047 2.55e-15 80.5
MsaG038810 MtrunA17_Chr5g0428031 28.994 169 118 2 366 534 9 175 4.09e-15 78.6
MsaG038810 MtrunA17_Chr5g0432491 34.459 148 95 2 366 513 23 168 8.90e-15 77.4
MsaG038810 MtrunA17_Chr1g0188031 32.075 159 92 4 363 513 17 167 9.73e-15 77.4
MsaG038810 MtrunA17_Chr2g0304111 31.081 148 100 1 366 513 23 168 1.24e-14 77.0
MsaG038810 MtrunA17_Chr2g0284011 32.778 180 112 5 359 534 5 179 1.29e-14 77.0
MsaG038810 MtrunA17_Chr8g0346071 27.811 169 120 1 366 534 17 183 1.66e-14 76.6
MsaG038810 MtrunA17_Chr1g0202831 31.613 155 96 3 364 513 409 558 2.20e-14 77.4
MsaG038810 MtrunA17_Chr7g0272841 32.597 181 105 6 372 544 74 245 2.83e-14 76.6
MsaG038810 MtrunA17_Chr1g0200601 34.416 154 95 4 365 514 29 180 2.93e-14 76.3
MsaG038810 MtrunA17_Chr2g0302431 31.788 151 101 2 363 513 17 165 3.23e-14 75.9
MsaG038810 MtrunA17_Chr1g0190831 27.647 170 120 3 363 531 1 168 3.95e-14 76.3
MsaG038810 MtrunA17_Chr4g0001331 31.169 154 103 2 360 513 14 164 4.22e-14 75.5
MsaG038810 MtrunA17_Chr5g0419441 28.743 167 116 2 364 530 237 400 5.21e-14 76.3
MsaG038810 MtrunA17_Chr8g0385341 33.987 153 95 4 366 514 30 180 8.56e-14 74.7
MsaG038810 MtrunA17_Chr1g0173921 26.974 152 109 2 363 513 1 151 9.60e-14 75.5
MsaG038810 MtrunA17_Chr4g0074111 29.891 184 117 5 366 549 18 189 1.20e-13 73.6
MsaG038810 MtrunA17_Chr8g0346081 26.506 166 120 1 366 531 17 180 1.99e-13 73.2
MsaG038810 MtrunA17_Chr3g0091311 26.639 244 161 5 358 593 4 237 3.57e-13 70.5
MsaG038810 MtrunA17_Chr1g0185221 28.235 170 119 3 363 531 1 168 4.27e-13 72.8
MsaG038810 MtrunA17_Chr6g0453681 29.870 154 106 1 360 513 13 164 8.14e-13 71.6
MsaG038810 MtrunA17_Chr4g0063881 27.907 172 122 1 363 534 8 177 8.67e-13 71.2
MsaG038810 MtrunA17_Chr1g0188991 29.319 191 121 6 366 555 15 192 9.90e-13 71.6
MsaG038810 MtrunA17_Chr7g0258051 25.490 153 114 0 363 515 13 165 1.03e-12 71.6
MsaG038810 MtrunA17_Chr6g0468751 29.870 154 106 1 360 513 13 164 1.07e-12 71.2
MsaG038810 MtrunA17_Chr3g0091281 30.409 171 105 5 358 526 4 162 1.07e-12 68.6
MsaG038810 MtrunA17_Chr7g0260191 25.882 170 123 3 363 531 1 168 1.33e-12 71.2
MsaG038810 MtrunA17_Chr5g0441011 32.099 162 95 5 363 513 1 158 1.42e-12 70.5
MsaG038810 MtrunA17_Chr8g0386981 30.055 183 113 6 372 550 414 585 1.51e-12 71.2
MsaG038810 MtrunA17_Chr4g0074811 36.306 157 86 8 366 514 91 241 1.80e-12 70.5
MsaG038810 MtrunA17_Chr1g0150321 34.459 148 94 2 366 513 13 157 1.87e-12 70.1
MsaG038810 MtrunA17_Chr2g0333821 31.847 157 104 2 357 513 5 158 1.95e-12 70.1
MsaG038810 MtrunA17_Chr8g0345801 34.351 131 79 3 371 499 20 145 2.08e-12 68.2
MsaG038810 MtrunA17_Chr1g0176421 33.121 157 101 4 366 520 161 315 2.38e-12 70.5
MsaG038810 MtrunA17_Chr4g0008561 32.143 140 82 4 560 697 148 276 2.57e-12 70.5
MsaG038810 MtrunA17_Chr1g0170551 33.962 106 64 2 596 701 162 261 2.60e-12 70.9
MsaG038810 MtrunA17_Chr3g0132591 36.552 145 82 3 372 515 118 253 2.95e-12 69.7
MsaG038810 MtrunA17_Chr1g0190131 29.677 155 91 4 364 510 7 151 3.85e-12 67.4
MsaG038810 MtrunA17_Chr1g0173541 30.526 190 116 5 338 514 16 202 4.34e-12 69.3
MsaG038810 MtrunA17_Chr2g0317001 26.374 182 124 3 364 545 13 184 4.55e-12 69.7
MsaG038810 MtrunA17_Chr5g0448721 30.864 162 108 4 366 525 96 255 4.61e-12 69.3
MsaG038810 MtrunA17_Chr1g0203881 32.237 152 97 3 366 513 41 190 5.53e-12 68.9
MsaG038810 MtrunA17_Chr7g0274941 29.032 155 105 3 358 510 8 159 5.62e-12 67.4
MsaG038810 MtrunA17_Chr7g0257751 31.875 160 103 3 359 514 51 208 6.37e-12 68.9
MsaG038810 MtrunA17_Chr4g0059951 34.641 153 94 4 366 514 73 223 9.23e-12 68.6
MsaG038810 MtrunA17_Chr4g0000431 30.519 154 103 3 361 513 19 169 9.57e-12 68.6
MsaG038810 MtrunA17_Chr5g0441691 30.000 190 120 5 330 514 37 218 1.24e-11 67.8
MsaG038810 MtrunA17_Chr1g0170281 32.099 162 104 4 366 523 118 277 1.63e-11 67.8
MsaG038810 MtrunA17_Chr3g0130151 30.000 150 101 2 366 513 244 391 1.89e-11 67.8
MsaG038810 MtrunA17_Chr3g0131181 35.714 154 91 6 366 514 29 179 1.95e-11 67.4
MsaG038810 MtrunA17_Chr8g0387671 33.548 155 97 4 364 514 64 216 2.13e-11 67.0
MsaG038810 MtrunA17_Chr3g0132671 27.624 181 99 4 363 513 16 194 3.11e-11 66.6
MsaG038810 MtrunA17_Chr4g0047191 33.663 101 67 0 413 513 94 194 5.17e-11 65.1
MsaG038810 MtrunA17_Chr2g0317501 31.792 173 109 6 346 513 112 280 5.18e-11 66.2
MsaG038810 MtrunA17_Chr7g0267751 32.468 154 96 4 366 514 135 285 5.44e-11 65.9
MsaG038810 MtrunA17_Chr5g0405421 29.605 152 103 2 366 513 99 250 5.49e-11 65.9
MsaG038810 MtrunA17_Chr4g0047211 33.663 101 67 0 413 513 89 189 6.21e-11 64.7
MsaG038810 MtrunA17_Chr2g0286281 33.750 160 95 5 372 526 95 248 6.52e-11 65.5
MsaG038810 MtrunA17_Chr1g0166101 28.571 154 103 3 363 513 21 170 7.98e-11 65.1
MsaG038810 MtrunA17_Chr7g0256001 31.515 165 103 5 363 520 138 299 9.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG038810 AT2G44830.2 64.721 788 225 24 1 761 4 765 0.0 910
MsaG038810 AT2G44830.3 64.721 788 225 24 1 761 4 765 0.0 910
MsaG038810 AT2G44830.1 64.721 788 225 24 1 761 4 765 0.0 910
MsaG038810 AT5G47750.1 66.536 511 153 6 260 761 85 586 0.0 681
MsaG038810 AT4G26610.1 61.690 509 169 8 255 761 22 506 0.0 622
MsaG038810 AT5G55910.2 64.286 476 151 7 293 761 35 498 0.0 609
MsaG038810 AT5G55910.1 64.286 476 151 7 293 761 35 498 0.0 609
MsaG038810 AT5G40030.1 63.801 442 140 8 325 761 73 499 0.0 587
MsaG038810 AT3G27580.2 63.805 431 146 5 296 718 109 537 0.0 556
MsaG038810 AT3G27580.1 63.805 431 146 5 296 718 109 537 0.0 556
MsaG038810 AT1G79250.1 61.211 446 151 6 334 761 114 555 0.0 547
MsaG038810 AT1G79250.3 61.211 446 151 6 334 761 114 555 0.0 547
MsaG038810 AT1G79250.2 61.211 446 151 6 334 761 114 555 0.0 547
MsaG038810 AT1G79250.4 61.211 446 151 6 334 761 114 555 0.0 547
MsaG038810 AT3G12690.1 59.954 437 164 4 329 761 148 577 0.0 537
MsaG038810 AT3G12690.3 59.954 437 164 4 329 761 148 577 0.0 537
MsaG038810 AT3G12690.2 59.954 437 164 4 329 761 148 577 0.0 537
MsaG038810 AT3G52890.2 58.065 465 169 10 310 761 483 934 3.90e-180 540
MsaG038810 AT3G52890.4 58.065 465 169 10 310 761 483 934 3.90e-180 540
MsaG038810 AT3G52890.1 58.065 465 169 10 310 761 483 934 3.90e-180 540
MsaG038810 AT3G52890.3 58.065 465 169 10 310 761 483 934 3.90e-180 540
MsaG038810 AT1G16440.1 59.859 426 156 6 339 761 86 499 2.59e-177 518
MsaG038810 AT2G36350.1 63.590 390 126 7 337 714 530 915 5.17e-175 527
MsaG038810 AT5G03640.2 58.865 423 155 6 304 714 480 895 1.30e-170 515
MsaG038810 AT5G03640.1 58.865 423 155 6 304 714 480 895 1.30e-170 515
MsaG038810 AT2G26700.1 47.191 445 181 9 322 715 42 483 1.81e-130 398
MsaG038810 AT2G34650.1 50.238 420 166 11 319 719 26 421 1.75e-127 387
MsaG038810 AT3G44610.1 51.351 370 137 6 366 708 71 424 5.21e-124 379
MsaG038810 AT3G14370.1 45.932 381 177 5 341 717 61 416 1.87e-108 339
MsaG038810 AT5G58140.6 46.825 378 157 4 340 717 551 884 7.38e-108 350
MsaG038810 AT5G58140.7 46.825 378 157 4 340 717 551 884 7.38e-108 350
MsaG038810 AT5G58140.5 46.825 378 157 4 340 717 551 884 7.38e-108 350
MsaG038810 AT5G58140.2 46.825 378 157 4 340 717 551 884 7.38e-108 350
MsaG038810 AT5G58140.1 46.825 378 157 4 340 717 551 884 7.38e-108 350
MsaG038810 AT5G58140.3 47.297 370 151 4 340 709 551 876 8.15e-106 345
MsaG038810 AT3G45780.2 45.297 404 178 6 315 717 611 972 5.50e-103 339
MsaG038810 AT3G45780.1 45.297 404 178 6 315 717 611 972 5.50e-103 339
MsaG038810 AT1G53700.1 46.214 383 164 7 341 713 66 416 3.47e-102 323
MsaG038810 AT1G51170.1 38.992 377 194 9 360 724 16 368 6.29e-73 243
MsaG038810 AT4G13000.1 36.164 365 197 8 361 721 15 347 2.69e-69 233
MsaG038810 AT3G20830.1 38.421 380 186 11 361 721 16 366 1.70e-67 229
MsaG038810 AT3G25250.1 37.228 368 189 10 361 716 12 349 7.17e-67 228
MsaG038810 AT1G45160.2 34.358 358 185 6 361 716 665 974 3.83e-54 202
MsaG038810 AT1G45160.1 34.358 358 185 6 361 716 665 974 5.04e-54 202
MsaG038810 AT1G30640.3 32.353 408 234 11 349 746 10 385 1.49e-52 190
MsaG038810 AT1G30640.2 32.353 408 234 11 349 746 103 478 3.18e-52 191
MsaG038810 AT1G30640.1 32.353 408 234 11 349 746 103 478 3.18e-52 191
MsaG038810 AT1G48490.3 34.571 350 178 8 354 702 817 1116 5.72e-51 193
MsaG038810 AT1G48490.2 34.571 350 178 8 354 702 817 1116 5.72e-51 193
MsaG038810 AT1G48490.1 34.571 350 178 8 354 702 817 1116 5.72e-51 193
MsaG038810 AT1G48490.4 34.571 350 178 8 354 702 818 1117 5.72e-51 193
MsaG038810 AT5G62310.1 34.384 349 184 8 355 702 744 1048 2.40e-50 191
MsaG038810 AT3G17850.1 34.571 350 184 9 354 702 871 1176 1.13e-48 186
MsaG038810 AT5G09890.2 32.113 355 200 9 354 702 90 409 1.20e-47 177
MsaG038810 AT5G09890.1 32.113 355 200 9 354 702 90 409 1.24e-47 177
MsaG038810 AT2G20470.3 31.026 419 236 12 354 760 112 489 2.61e-47 176
MsaG038810 AT2G20470.2 31.026 419 236 12 354 760 112 489 6.39e-47 176
MsaG038810 AT2G20470.1 31.026 419 236 12 354 760 112 489 6.39e-47 176
MsaG038810 AT4G33080.2 30.909 385 226 9 354 728 82 436 9.46e-47 174
MsaG038810 AT4G33080.1 29.833 419 251 10 354 759 82 470 9.92e-47 174
MsaG038810 AT1G03920.2 31.354 421 233 13 354 760 12 390 2.88e-46 172
MsaG038810 AT1G03920.1 31.354 421 233 13 354 760 125 503 6.68e-46 173
MsaG038810 AT1G03920.3 31.354 421 233 13 354 760 125 503 6.68e-46 173
MsaG038810 AT3G23310.1 29.639 388 228 10 354 732 108 459 3.63e-44 168
MsaG038810 AT4G14350.2 29.657 408 241 11 335 732 85 456 3.05e-43 165
MsaG038810 AT4G14350.1 29.657 408 241 11 335 732 85 456 3.05e-43 165
MsaG038810 AT4G14350.4 29.657 408 241 11 335 732 85 456 3.05e-43 165
MsaG038810 AT4G14350.3 29.657 408 241 11 335 732 85 456 3.39e-43 165
MsaG038810 AT3G10540.1 28.642 405 221 10 352 753 31 370 2.13e-39 152
MsaG038810 AT5G04510.2 29.428 367 192 9 352 716 30 331 4.87e-39 150
MsaG038810 AT5G04510.1 29.428 367 192 9 352 716 30 331 7.55e-39 151
MsaG038810 AT2G19400.1 29.124 388 230 12 355 729 94 449 1.23e-36 145
MsaG038810 AT5G58140.4 48.855 131 67 0 340 470 551 681 1.72e-32 134
MsaG038810 AT3G08720.1 38.710 155 93 1 359 513 133 285 1.36e-26 114
MsaG038810 AT3G08720.1 45.133 113 58 3 591 702 291 400 1.62e-23 105
MsaG038810 AT3G08720.3 38.710 155 93 1 359 513 133 285 1.36e-26 114
MsaG038810 AT3G08720.3 45.133 113 58 3 591 702 291 400 1.62e-23 105
MsaG038810 AT3G08720.4 38.710 155 93 1 359 513 133 285 1.36e-26 114
MsaG038810 AT3G08720.4 45.133 113 58 3 591 702 291 400 1.62e-23 105
MsaG038810 AT3G08720.2 38.710 155 93 1 359 513 133 285 1.36e-26 114
MsaG038810 AT3G08720.2 45.133 113 58 3 591 702 291 400 1.62e-23 105
MsaG038810 AT3G08730.1 38.065 155 94 1 359 513 127 279 3.10e-26 113
MsaG038810 AT3G08730.1 46.018 113 57 3 591 702 285 394 2.22e-24 107
MsaG038810 AT3G08730.2 38.065 155 94 1 359 513 127 279 3.10e-26 113
MsaG038810 AT3G08730.2 46.018 113 57 3 591 702 285 394 2.22e-24 107
MsaG038810 AT5G04510.3 29.646 226 155 3 331 556 10 231 1.52e-24 105
MsaG038810 AT5G18700.1 37.748 151 86 3 363 513 1 143 3.96e-21 99.8
MsaG038810 AT2G45490.1 24.179 335 174 7 363 697 19 273 1.86e-19 90.1
MsaG038810 AT2G20050.2 38.793 116 65 4 593 705 931 1043 4.63e-18 89.7
MsaG038810 AT2G20050.1 38.793 116 65 4 593 705 934 1046 5.01e-18 89.7
MsaG038810 AT5G57630.2 34.395 157 96 3 359 513 5 156 6.65e-18 87.4
MsaG038810 AT5G57630.1 34.395 157 96 3 359 513 5 156 7.42e-18 87.4
MsaG038810 AT2G45490.2 32.680 153 101 2 363 515 19 169 1.23e-17 84.0
MsaG038810 AT2G25880.1 33.133 166 109 1 349 514 8 171 3.69e-17 83.2
MsaG038810 AT2G25880.1 36.111 108 65 1 590 697 173 276 1.07e-14 75.9
MsaG038810 AT4G24400.1 31.361 169 114 1 366 534 9 175 4.24e-17 85.1
MsaG038810 AT4G24400.2 31.361 169 114 1 366 534 9 175 4.62e-17 84.7
MsaG038810 AT5G45820.1 33.758 157 101 2 357 513 3 156 6.61e-17 84.3
MsaG038810 AT2G25880.4 33.133 166 109 1 349 514 21 184 8.06e-17 82.4
MsaG038810 AT2G25880.4 36.449 107 64 1 590 696 186 288 1.14e-14 75.9
MsaG038810 AT1G12680.1 35.065 154 90 3 370 522 111 255 8.20e-17 84.3
MsaG038810 AT5G45810.1 31.720 186 115 4 361 546 23 196 1.26e-16 84.0
MsaG038810 AT2G25880.3 33.133 166 109 1 349 514 69 232 1.38e-16 82.4
MsaG038810 AT2G25880.3 36.449 107 64 1 590 696 234 336 2.64e-14 75.5
MsaG038810 AT4G32830.1 33.553 152 99 1 363 514 28 177 1.81e-16 81.3
MsaG038810 AT4G32830.1 36.111 108 65 1 590 697 179 282 2.96e-14 74.7
MsaG038810 AT4G18700.1 31.720 186 115 4 361 546 21 194 2.38e-16 83.2
MsaG038810 AT5G25110.1 31.609 174 114 3 363 534 40 210 3.14e-16 82.8
MsaG038810 AT1G29230.1 31.959 194 116 5 355 546 63 242 3.26e-16 82.8
MsaG038810 AT3G04810.2 28.235 170 119 3 363 531 1 168 5.07e-16 82.4
MsaG038810 AT3G04810.1 28.235 170 119 3 363 531 1 168 5.07e-16 82.4
MsaG038810 AT3G04810.3 28.235 170 119 3 363 531 1 168 5.07e-16 82.4
MsaG038810 AT2G25090.1 31.250 192 125 5 357 546 6 192 1.21e-15 80.9
MsaG038810 AT5G10930.1 34.503 171 102 7 366 531 12 177 2.03e-15 80.1
MsaG038810 AT3G44200.2 29.605 152 105 2 363 513 5 155 2.83e-15 80.9
MsaG038810 AT3G44200.1 29.605 152 105 2 363 513 5 155 2.83e-15 80.9
MsaG038810 AT5G28290.1 28.824 170 118 3 363 531 1 168 3.10e-15 80.1
MsaG038810 AT5G28290.2 28.824 170 118 3 363 531 1 168 3.10e-15 80.1
MsaG038810 AT5G28290.3 28.824 170 118 3 363 531 1 168 3.12e-15 80.1
MsaG038810 AT3G01090.3 32.450 151 100 1 363 513 16 164 4.33e-15 79.3
MsaG038810 AT3G01090.1 32.450 151 100 1 363 513 16 164 4.33e-15 79.3
MsaG038810 AT5G01810.1 34.591 159 97 4 357 513 3 156 5.10e-15 78.6
MsaG038810 AT5G01810.2 34.591 159 97 4 357 513 3 156 5.10e-15 78.6
MsaG038810 AT3G01090.2 32.450 151 100 1 363 513 39 187 5.78e-15 79.0
MsaG038810 AT3G06030.1 30.288 208 122 6 346 547 58 248 6.55e-15 79.3
MsaG038810 AT1G35670.1 35.065 154 94 4 365 514 25 176 6.61e-15 78.6
MsaG038810 AT2G25880.2 36.111 108 65 1 590 697 141 244 6.87e-15 75.9
MsaG038810 AT5G01810.3 34.591 159 97 4 357 513 3 156 7.16e-15 77.8
MsaG038810 AT1G54510.4 27.647 170 120 3 363 531 1 168 7.90e-15 79.0
MsaG038810 AT1G54510.2 27.647 170 120 3 363 531 1 168 7.90e-15 79.0
MsaG038810 AT1G54510.1 27.647 170 120 3 363 531 1 168 7.90e-15 79.0
MsaG038810 AT1G54510.3 27.647 170 120 3 363 531 1 168 7.90e-15 79.0
MsaG038810 AT3G17510.1 32.450 151 100 2 363 513 17 165 9.61e-15 77.8
MsaG038810 AT2G34180.1 30.769 195 117 4 355 546 46 225 1.26e-14 77.8
MsaG038810 AT4G40010.1 23.188 345 170 10 363 697 1 260 1.33e-14 76.6
MsaG038810 AT3G63280.2 28.824 170 118 3 363 531 1 168 1.56e-14 77.8
MsaG038810 AT3G63280.3 28.824 170 118 3 363 531 1 168 1.56e-14 77.8
MsaG038810 AT3G63280.1 28.824 170 118 3 363 531 1 168 1.56e-14 77.8
MsaG038810 AT3G29160.3 32.298 161 103 3 357 513 7 165 2.07e-14 75.9
MsaG038810 AT1G01140.2 31.016 187 120 4 347 531 5 184 2.77e-14 76.3
MsaG038810 AT1G01140.1 31.016 187 120 4 347 531 5 184 2.98e-14 76.3
MsaG038810 AT1G01140.3 31.016 187 120 4 347 531 5 184 3.03e-14 76.3
MsaG038810 AT3G63280.4 28.824 170 118 3 363 531 55 222 3.49e-14 76.6
MsaG038810 AT2G30360.1 33.113 151 94 3 366 513 21 167 4.00e-14 75.9
MsaG038810 AT4G14580.1 23.582 335 169 8 359 685 14 269 4.07e-14 75.9
MsaG038810 AT3G29160.1 32.298 161 103 3 357 513 7 165 4.07e-14 76.3
MsaG038810 AT3G29160.2 32.298 161 103 3 357 513 7 165 4.07e-14 76.3
MsaG038810 AT1G30270.1 30.636 173 112 4 363 531 28 196 6.09e-14 75.5
MsaG038810 AT1G69220.1 29.341 167 115 2 364 530 247 410 7.64e-14 75.9
MsaG038810 AT2G26980.3 31.765 170 108 5 366 531 14 179 7.94e-14 75.1
MsaG038810 AT2G26980.1 31.765 170 108 5 366 531 14 179 8.75e-14 74.3
MsaG038810 AT2G26980.4 31.765 170 108 5 366 531 24 189 8.83e-14 74.7
MsaG038810 AT1G30270.2 30.636 173 112 4 363 531 28 196 9.44e-14 74.7
MsaG038810 AT5G21326.1 31.351 185 110 7 363 534 1 181 1.23e-13 74.3
MsaG038810 AT5G35410.2 28.488 172 121 2 363 534 8 177 1.51e-13 73.6
MsaG038810 AT2G26980.2 32.667 150 95 4 366 513 14 159 1.52e-13 72.0
MsaG038810 AT2G26980.5 31.214 173 111 5 363 531 11 179 1.96e-13 73.6
MsaG038810 AT3G20860.1 28.477 151 107 1 363 513 1 150 2.03e-13 73.6
MsaG038810 AT2G41860.1 32.386 176 113 4 343 514 31 204 2.04e-13 73.9
MsaG038810 AT2G41860.2 32.386 176 113 4 343 514 31 204 2.06e-13 73.9
MsaG038810 AT5G39440.1 32.450 151 100 2 363 513 16 164 2.32e-13 73.9
MsaG038810 AT5G39440.1 30.556 144 90 5 599 742 178 311 8.75e-11 65.5
MsaG038810 AT1G53165.1 27.322 183 120 4 363 545 15 184 3.01e-13 73.9
MsaG038810 AT1G53165.3 27.322 183 120 4 363 545 15 184 3.18e-13 73.9
MsaG038810 AT1G53165.2 27.322 183 120 4 363 545 15 184 3.36e-13 73.6
MsaG038810 AT5G35410.1 28.488 172 121 2 363 534 8 177 4.27e-13 72.8
MsaG038810 AT2G38490.1 35.099 151 89 4 366 513 28 172 4.49e-13 72.4
MsaG038810 AT5G58380.1 29.268 164 111 3 370 531 16 176 4.69e-13 72.8
MsaG038810 AT4G35310.2 32.716 162 105 4 366 525 97 256 5.07e-13 72.8
MsaG038810 AT4G35310.1 32.716 162 105 4 366 525 97 256 5.07e-13 72.8
MsaG038810 AT4G09570.1 33.766 154 96 4 365 514 24 175 6.99e-13 72.4
MsaG038810 AT5G12180.1 31.081 222 128 7 305 514 15 223 7.17e-13 72.4
MsaG038810 AT5G01820.1 33.121 157 101 2 357 513 14 166 1.28e-12 71.2
MsaG038810 AT1G63700.1 31.579 152 100 2 364 513 398 547 1.61e-12 71.6
MsaG038810 AT1G63700.2 31.579 152 100 2 364 513 398 547 1.61e-12 71.6
MsaG038810 AT3G23000.1 31.013 158 94 3 363 513 22 171 1.84e-12 70.5
MsaG038810 AT1G53570.6 29.878 164 111 2 362 523 210 371 2.05e-12 70.9
MsaG038810 AT1G53570.7 29.878 164 111 2 362 523 210 371 2.08e-12 70.9
MsaG038810 AT1G50240.3 34.951 103 61 2 596 698 161 257 2.48e-12 71.2
MsaG038810 AT1G50240.2 34.951 103 61 2 596 698 161 257 2.48e-12 71.2
MsaG038810 AT1G53570.2 29.878 164 111 2 362 523 210 371 2.95e-12 70.5
MsaG038810 AT1G53570.3 29.878 164 111 2 362 523 210 371 2.95e-12 70.5
MsaG038810 AT1G53570.1 29.878 164 111 2 362 523 210 371 3.03e-12 70.5
MsaG038810 AT1G53570.4 29.878 164 111 2 362 523 210 371 3.10e-12 70.5
MsaG038810 AT2G17290.1 32.500 160 104 4 366 523 85 242 3.58e-12 70.1
MsaG038810 AT2G17290.2 32.500 160 104 4 366 523 85 242 3.58e-12 70.1
MsaG038810 AT1G50700.3 33.333 153 96 4 366 514 73 223 3.75e-12 69.7
MsaG038810 AT3G61960.1 34.351 131 79 4 371 499 15 140 4.49e-12 70.1
MsaG038810 AT1G48260.1 34.000 150 93 4 366 513 11 156 4.51e-12 69.3
MsaG038810 AT1G54960.1 27.273 165 103 4 354 513 66 218 5.14e-12 69.7
MsaG038810 AT1G54960.2 27.273 165 103 4 354 513 66 218 5.14e-12 69.7
MsaG038810 AT3G61960.2 34.351 131 79 4 371 499 15 140 5.34e-12 69.7
MsaG038810 AT1G50700.1 33.333 153 96 4 366 514 73 223 5.41e-12 69.3
MsaG038810 AT1G09000.2 26.404 178 120 4 372 544 75 246 5.83e-12 69.7
MsaG038810 AT1G09000.1 26.404 178 120 4 372 544 75 246 5.90e-12 69.7
MsaG038810 AT5G19360.1 33.333 156 96 4 364 514 66 218 7.36e-12 68.9
MsaG038810 AT3G10660.2 33.987 153 95 4 366 514 186 336 8.07e-12 69.3
MsaG038810 AT3G10660.1 33.987 153 95 4 366 514 186 336 8.07e-12 69.3
MsaG038810 AT3G45240.3 29.697 165 104 4 358 513 100 261 8.07e-12 68.2
MsaG038810 AT1G69220.2 28.402 169 118 2 362 530 218 383 8.32e-12 69.3
MsaG038810 AT3G45240.2 29.697 165 104 4 358 513 100 261 8.80e-12 68.2
MsaG038810 AT3G45240.1 29.697 165 104 4 358 513 100 261 8.80e-12 68.2
MsaG038810 AT1G50700.2 33.333 153 96 4 366 514 73 223 8.95e-12 68.9
MsaG038810 AT5G23580.1 29.902 204 120 7 343 528 2 200 9.72e-12 68.6
MsaG038810 AT3G20410.2 31.818 154 97 4 366 514 91 241 1.11e-11 68.6
MsaG038810 AT3G20410.1 31.818 154 97 4 366 514 91 241 1.11e-11 68.6
MsaG038810 AT3G57530.2 33.548 155 97 4 364 514 61 213 1.13e-11 68.2
MsaG038810 AT2G35890.2 28.505 214 140 6 311 514 72 282 1.15e-11 68.6
MsaG038810 AT2G35890.1 28.505 214 140 6 311 514 72 282 1.15e-11 68.6
MsaG038810 AT2G38910.1 33.121 157 101 4 366 520 134 288 1.22e-11 68.6
MsaG038810 AT3G57530.1 33.548 155 97 4 364 514 61 213 1.25e-11 68.6
MsaG038810 AT4G24100.1 27.513 189 125 4 366 554 33 209 1.27e-11 68.6
MsaG038810 AT4G04720.2 31.373 153 99 3 366 514 80 230 1.34e-11 68.2
MsaG038810 AT4G04720.1 31.373 153 99 3 366 514 80 230 1.34e-11 68.2
MsaG038810 AT4G24100.2 27.513 189 125 4 366 554 33 209 1.57e-11 68.6
MsaG038810 AT4G24100.4 27.513 189 125 4 366 554 49 225 1.74e-11 68.2
MsaG038810 AT4G30960.1 30.519 154 102 2 362 513 18 168 1.78e-11 67.4
MsaG038810 AT4G24100.3 27.513 189 125 4 366 554 49 225 1.91e-11 68.2
MsaG038810 AT2G17890.1 32.192 146 95 2 372 513 114 259 2.64e-11 67.4
MsaG038810 AT1G73500.1 31.902 163 92 6 369 527 50 197 2.72e-11 65.9
MsaG038810 AT5G04870.1 33.987 153 95 4 366 514 150 300 3.34e-11 67.0
MsaG038810 AT4G10730.2 27.895 190 123 6 366 554 27 203 3.38e-11 67.4
MsaG038810 AT5G18610.1 33.750 160 95 5 372 526 89 242 3.60e-11 67.0
MsaG038810 AT5G18610.2 33.750 160 95 5 372 526 89 242 3.60e-11 67.0
MsaG038810 AT5G18610.3 33.750 160 95 5 372 526 89 242 3.60e-11 67.0
MsaG038810 AT4G10730.1 27.895 190 123 6 366 554 47 223 4.49e-11 67.0
MsaG038810 AT5G12480.1 32.468 154 98 4 365 514 58 209 4.63e-11 66.6
MsaG038810 AT4G36070.1 28.249 177 120 3 341 513 49 222 6.10e-11 66.2
MsaG038810 AT5G19450.2 32.026 153 98 3 366 514 57 207 6.75e-11 65.9
MsaG038810 AT5G19450.1 32.026 153 98 3 366 514 57 207 6.75e-11 65.9
MsaG038810 AT4G14480.1 30.201 149 101 2 366 513 15 161 7.23e-11 65.9
MsaG038810 AT4G36070.2 28.249 177 120 3 341 513 49 222 7.66e-11 65.9
MsaG038810 AT1G32320.1 31.507 146 90 4 369 513 51 187 7.96e-11 64.3
MsaG038810 AT2G07020.1 31.694 183 109 8 362 538 415 587 9.73e-11 65.9
MsaG038810 AT1G08650.2 32.692 156 98 6 359 510 8 160 9.94e-11 63.9

Find 201 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCTAATCAGCTTCTTTC+TGG 0.082275 7:+80959540 None:intergenic
CCTTCTCCTTTGATAATTTC+AGG 0.129636 7:+80957397 None:intergenic
CCGAGCACGGGATGGAAATT+TGG 0.159585 7:-80959689 MsaT038810.1:CDS
ATTTCCTTTATGTGGTTTAC+TGG 0.197924 7:+80959741 None:intergenic
GCGGAGATCTGCATGCTTTA+AGG 0.224664 7:-80959408 MsaT038810.1:CDS
CTTTCTTTGAAGGCGTGAAC+TGG 0.253375 7:-80957129 MsaT038810.1:CDS
CGGATTTCGACCTTTCTCTT+AGG 0.258990 7:-80957690 MsaT038810.1:CDS
TCCATCGGCCTTGGAATTTC+CGG 0.261192 7:+80957082 None:intergenic
TCCTCGGACCTTGCCAGTTC+TGG 0.275141 7:-80960721 MsaT038810.1:CDS
GTCAAATGCAAGAATTCTTT+TGG 0.286789 7:-80960529 MsaT038810.1:CDS
AAGAGCAGCAGTGATTCTTT+TGG 0.319984 7:-80960378 MsaT038810.1:CDS
CTCTTCAACATCTCGATATC+AGG 0.320467 7:+80960396 None:intergenic
CTGAGGAGAACGATTGCGTT+TGG 0.320798 7:-80960041 MsaT038810.1:CDS
TCAGATTTGTTCTGACCTAT+TGG 0.322338 7:+80960273 None:intergenic
CGACTTGGTTGTGGTGATAT+TGG 0.329678 7:-80959640 MsaT038810.1:CDS
GGTAATAATGAGATGAAGTC+TGG 0.331322 7:-80956983 MsaT038810.1:CDS
AGATCAGTATCGATAGGTTC+TGG 0.342416 7:+80960315 None:intergenic
ATATGTACTCGCACAACTAT+TGG 0.343409 7:+80959936 None:intergenic
CTGGAGGCCAGGAGTGTCAT+AGG 0.345563 7:+80960570 None:intergenic
GATAGGCCAGGATCAGGTTT+AGG 0.346745 7:+80957502 None:intergenic
TCAGCTTCTTTCTGGCAGAT+AGG 0.356525 7:+80959548 None:intergenic
TACGAATCGAAAGATCTTCT+AGG 0.363452 7:+80960208 None:intergenic
AGTTCACTTTCCATCGGCCT+TGG 0.367482 7:+80957073 None:intergenic
AAACAGCACCCTTTCTTTGA+AGG 0.368314 7:-80957139 MsaT038810.1:CDS
TGTTTCTCCTGCAGAAAGTA+TGG 0.368553 7:-80960157 MsaT038810.1:CDS
GACCGACAGATTCTCATGTT+TGG 0.379811 7:-80959449 MsaT038810.1:CDS
GCGTGAACTGGGCGTTGATT+AGG 0.386208 7:-80957117 MsaT038810.1:CDS
GCAGTTGATTGGTGGACATT+TGG 0.386364 7:-80957364 MsaT038810.1:CDS
CTAGGGTCATTTCCTTTATG+TGG 0.390807 7:+80959733 None:intergenic
AAGGGAGATATTGCAGTTGC+TGG 0.395689 7:-80959509 MsaT038810.1:CDS
CGAGCACGGGATGGAAATTT+GGG 0.397667 7:-80959688 MsaT038810.1:CDS
GCATTATGTGACCGTCTTCT+CGG 0.399377 7:+80957716 None:intergenic
CAGCTTCTTTCTGGCAGATA+GGG 0.404765 7:+80959549 None:intergenic
GGCAAGAGTTCTTTGTGGTC+TGG 0.408624 7:+80960417 None:intergenic
ACTGATCCAAGTTCATTTGC+TGG 0.409176 7:-80960351 MsaT038810.1:CDS
CTTCTCCTTTGATAATTTCA+GGG 0.411722 7:+80957398 None:intergenic
CGCCATCGTGAGTTCTGATA+AGG 0.413148 7:+80957650 None:intergenic
GCCTCAGCGATGACAGCAAC+TGG 0.417899 7:-80959783 MsaT038810.1:CDS
TGAGGAGAACGATTGCGTTT+GGG 0.418380 7:-80960040 MsaT038810.1:CDS
CAGATTCTCATGTTTGGTAA+TGG 0.420632 7:-80959443 MsaT038810.1:CDS
TTCTTTGTGGTCTGGAAAAG+AGG 0.423392 7:+80960425 None:intergenic
TTGAAAATACTGTTGGGGTT+GGG 0.424028 7:-80957030 MsaT038810.1:CDS
TTCTTGCACGAGTTATTGTA+TGG 0.426815 7:-80957337 MsaT038810.1:CDS
TTCTAGGAAAGGACCCTTCA+AGG 0.432667 7:+80960224 None:intergenic
AGTATTAAAGGAAATGTTAG+AGG 0.433403 7:-80959859 MsaT038810.1:CDS
CCTATCAACTGATTCACTTC+CGG 0.436444 7:-80957485 MsaT038810.1:CDS
GAAGCTGGTCAGAGACTAAC+GGG 0.439517 7:-80960663 MsaT038810.1:CDS
GTAGGCTCAGCAAGAAGTTC+CGG 0.439824 7:+80957466 None:intergenic
AACGAAGAGCACGTCCTTGA+AGG 0.443303 7:-80960238 MsaT038810.1:CDS
AAGCCGTTGAAAATACTGTT+GGG 0.451321 7:-80957036 MsaT038810.1:CDS
TCAGATACCTCAACCAGAAC+TGG 0.455441 7:+80960708 None:intergenic
CGGTTTCCTGATCCTTTGAA+AGG 0.455687 7:+80957307 None:intergenic
CCGGAAGTGAATCAGTTGAT+AGG 0.459794 7:+80957485 None:intergenic
GTATACAGCATAGGTAGAAA+TGG 0.462769 7:+80959481 None:intergenic
CAGTTCACGCCTTCAAAGAA+AGG 0.463894 7:+80957130 None:intergenic
TCAGTTGATAGGCCAGGATC+AGG 0.469542 7:+80957496 None:intergenic
CAACTGAGCCACTTCTCTAC+TGG 0.471194 7:+80960551 None:intergenic
AGAACGGTTTATGTACCAAT+AGG 0.471741 7:-80960288 MsaT038810.1:CDS
ACTCAGGAAACTTGAGCTGC+TGG 0.473429 7:+80957260 None:intergenic
AAAACGCCTTTCAAAGGATC+AGG 0.476423 7:-80957313 MsaT038810.1:CDS
TTTGGTAATGGAGTACTGTC+CGG 0.480641 7:-80959431 MsaT038810.1:CDS
CTAGCACCAGCAAATGAACT+TGG 0.481646 7:+80960345 None:intergenic
GACCTTGCCAGTTCTGGTTG+AGG 0.481979 7:-80960715 MsaT038810.1:CDS
CCACTTCTCTACTGGAGGCC+AGG 0.483365 7:+80960559 None:intergenic
TCTTCAGCCATACTTTCTGC+AGG 0.483767 7:+80960150 None:intergenic
CCAAATTTCCATCCCGTGCT+CGG 0.485772 7:+80959689 None:intergenic
GCTTTAAGGCAACGGCAACC+AGG 0.490897 7:-80959394 MsaT038810.1:CDS
AGTGCCAGTAAACCACATAA+AGG 0.492741 7:-80959745 MsaT038810.1:CDS
GAAGATATTCAATTGCCAAC+AGG 0.493493 7:+80957788 None:intergenic
GACATCGACCGAGCTGTTGT+AGG 0.498027 7:+80957448 None:intergenic
CAATCGTTCTCCTCAGAACC+CGG 0.499443 7:+80960048 None:intergenic
GCCGGTAGTTCACTTTCCAT+CGG 0.500703 7:+80957067 None:intergenic
TAACTCGTAGCCGGCGACTC+AGG 0.500708 7:+80957244 None:intergenic
GATCAGTATCGATAGGTTCT+GGG 0.504925 7:+80960316 None:intergenic
AAAGAGCCACAGAACCGTCT+TGG 0.507088 7:-80957187 MsaT038810.1:CDS
TATGGTAAAACGCCTTTCAA+AGG 0.510851 7:-80957319 MsaT038810.1:CDS
GTTGAAAATACTGTTGGGGT+TGG 0.511679 7:-80957031 MsaT038810.1:CDS
TTTCTTTGAAGGCGTGAACT+GGG 0.513612 7:-80957128 MsaT038810.1:CDS
ATTTCCATCCCGTGCTCGGA+CGG 0.518147 7:+80959693 None:intergenic
CTATCCTTGCCGTCCGAGCA+CGG 0.521827 7:-80959702 MsaT038810.1:CDS
ACCAATCAACTGCACTTCCA+TGG 0.522469 7:+80957374 None:intergenic
CGAGAACTGTCTACTTCCCC+CGG 0.523861 7:-80960067 MsaT038810.1:CDS
GCCGATGGAAAGTGAACTAC+CGG 0.525114 7:-80957068 MsaT038810.1:CDS
TTACTTAGACGACTTGGTTG+TGG 0.525174 7:-80959649 MsaT038810.1:CDS
GGACTGACATTTCCACTTGG+AGG 0.525368 7:+80960006 None:intergenic
TTGGTAATGGAGTACTGTCC+GGG 0.526121 7:-80959430 MsaT038810.1:CDS
TACTCTGAGAAATGTTTCCC+TGG 0.527525 7:+80959376 None:intergenic
GCTACACTGTTCAATGTAGT+TGG 0.527755 7:-80957283 MsaT038810.1:CDS
TATCCTTGCCGTCCGAGCAC+GGG 0.529463 7:-80959701 MsaT038810.1:CDS
GCCATCGTGAGTTCTGATAA+GGG 0.530818 7:+80957651 None:intergenic
GAAGCCGTTGAAAATACTGT+TGG 0.532471 7:-80957037 MsaT038810.1:CDS
GGAGAAACAACAGCTAGGAT+TGG 0.533842 7:+80960171 None:intergenic
TGATTAGAGCGCAGACAGAA+AGG 0.536427 7:-80959528 MsaT038810.1:CDS
GATGCACGAGCGCCTGAAAA+CGG 0.537344 7:+80960099 None:intergenic
GGTCAGAACAAATCTGAGGC+TGG 0.537400 7:-80960267 MsaT038810.1:CDS
GATTAGAGCGCAGACAGAAA+GGG 0.538191 7:-80959527 MsaT038810.1:CDS
GGATGGCCCTATGACACTCC+TGG 0.538909 7:-80960577 MsaT038810.1:CDS
GCACCTACAAGAACACCAAA+AGG 0.541410 7:-80960453 MsaT038810.1:CDS
GTAATAATGAGATGAAGTCT+GGG 0.543705 7:-80956982 MsaT038810.1:CDS
GCCATGGAAGTGCAGTTGAT+TGG 0.545288 7:-80957375 MsaT038810.1:CDS
AAAGCTGTAATAAGAGAAGC+TGG 0.545303 7:-80960678 MsaT038810.1:CDS
ATCTGCATGCTTTAAGGCAA+CGG 0.545374 7:-80959402 MsaT038810.1:CDS
CGGAAACCTAAACCTGATCC+TGG 0.547070 7:-80957508 MsaT038810.1:CDS
CAAGGATAGCCTTCCACCTA+GGG 0.547090 7:+80959716 None:intergenic
GCACACCACCGGAAATTCCA+AGG 0.549582 7:-80957090 MsaT038810.1:CDS
TATCAGGCAAGAGTTCTTTG+TGG 0.555533 7:+80960412 None:intergenic
GAACCGTCTTGGAGTGAAGA+GGG 0.556708 7:-80957176 MsaT038810.1:CDS
TTATGCTGCAGAGGTCCTGT+TGG 0.558832 7:-80957803 MsaT038810.1:CDS
ACGAAGAGCACGTCCTTGAA+GGG 0.560080 7:-80960237 MsaT038810.1:CDS
TCAACGGCTTCAAATTTAGC+CGG 0.560910 7:+80957049 None:intergenic
TGCAATGAAAGTTATGGACA+AGG 0.561915 7:-80959575 MsaT038810.1:CDS
TAATATATTGAGACATGGAA+AGG 0.566992 7:-80960764 None:intergenic
TTTAAGTTACTTAGACGACT+TGG 0.567132 7:-80959655 MsaT038810.1:CDS
ATTCTCTTGCTGAAACCGCA+CGG 0.568793 7:+80960622 None:intergenic
GGCTGAATGCATACTGATGT+AGG 0.568799 7:+80957577 None:intergenic
ATTGAATATCTTCACATGCT+CGG 0.570449 7:-80957778 MsaT038810.1:CDS
ATCGAAAGATCTTCTAGGAA+AGG 0.570967 7:+80960213 None:intergenic
GGCGACCCTTCAAAACGAGC+AGG 0.570992 7:-80957631 MsaT038810.1:CDS
CATCCCGTGCTCGGACGGCA+AGG 0.571455 7:+80959698 None:intergenic
AAACAACGCACCTAAGAGAA+AGG 0.572342 7:+80957680 None:intergenic
AATAGTAACAAGATGGTTGG+TGG 0.572917 7:-80957004 MsaT038810.1:CDS
ATGGAAGTGCAGTTGATTGG+TGG 0.573036 7:-80957372 MsaT038810.1:CDS
GATTAGGTGCAGCACACCAC+CGG 0.573196 7:-80957101 MsaT038810.1:CDS
AACGTACTAGTCCGAGAAGA+CGG 0.575392 7:-80957727 MsaT038810.1:CDS
AATATATTGAGACATGGAAA+GGG 0.575783 7:-80960763 None:intergenic
GCAAGGATAGCCTTCCACCT+AGG 0.576511 7:+80959715 None:intergenic
TAGGCTCGATACAAGCAGGC+TGG 0.576773 7:+80957596 None:intergenic
AGTGAATCAGTTGATAGGCC+AGG 0.577345 7:+80957490 None:intergenic
AGTTCACGCCTTCAAAGAAA+GGG 0.578355 7:+80957131 None:intergenic
TTCTCCTTTGATAATTTCAG+GGG 0.578576 7:+80957399 None:intergenic
ATTATCAAAGGAGAAGGCCA+TGG 0.578961 7:-80957391 MsaT038810.1:CDS
CAGAGACAAAGGTACTTCCT+CGG 0.579272 7:-80960737 MsaT038810.1:CDS
TTCTCTTGCTGAAACCGCAC+GGG 0.579296 7:+80960623 None:intergenic
ACCGGAAATTCCAAGGCCGA+TGG 0.580011 7:-80957083 MsaT038810.1:CDS
CCTGAAATTATCAAAGGAGA+AGG 0.580491 7:-80957397 MsaT038810.1:CDS
AGCGATGCATTGACTAGTGA+TGG 0.580747 7:-80959910 MsaT038810.1:CDS
AGCAATAGTAACAAGATGGT+TGG 0.581821 7:-80957007 MsaT038810.1:CDS
CTCGCCCCTGAAATTATCAA+AGG 0.582246 7:-80957403 MsaT038810.1:CDS
CTTTAAGGCAACGGCAACCA+GGG 0.582752 7:-80959393 MsaT038810.1:CDS
TTCACTCCAAGACGGTTCTG+TGG 0.589519 7:+80957181 None:intergenic
AGGAAATGACCCTAGGTGGA+AGG 0.591031 7:-80959725 MsaT038810.1:CDS
AGACGGTCACATAATGCTCT+CGG 0.591494 7:-80957710 MsaT038810.1:CDS
TCAAAATGTGTATACAGCAT+AGG 0.591758 7:+80959472 None:intergenic
ACACCGAGTTGCACTCAACT+CGG 0.592368 7:+80959603 None:intergenic
AATCGTTCTCCTCAGAACCC+GGG 0.592719 7:+80960049 None:intergenic
TGGAGGCCAGGAGTGTCATA+GGG 0.594478 7:+80960571 None:intergenic
ATCAGTATCGATAGGTTCTG+GGG 0.594700 7:+80960317 None:intergenic
CTTGCCGTCCGAGCACGGGA+TGG 0.594869 7:-80959697 MsaT038810.1:CDS
GATGTAGGCTCGATACAAGC+AGG 0.596432 7:+80957592 None:intergenic
ATCGTTCTCCTCAGAACCCG+GGG 0.598420 7:+80960050 None:intergenic
GTATTAAAGGAAATGTTAGA+GGG 0.599987 7:-80959858 MsaT038810.1:CDS
CTACATTGAACAGTGTAGCT+CGG 0.601693 7:+80957287 None:intergenic
CACCCCTCTTCACTCCAAGA+CGG 0.602730 7:+80957173 None:intergenic
ATCGGCCTTGGAATTTCCGG+TGG 0.604088 7:+80957085 None:intergenic
AGAAGCTGGTCAGAGACTAA+CGG 0.604574 7:-80960664 MsaT038810.1:CDS
TCTCCGAGTTGAGTGCAACT+CGG 0.605835 7:-80959606 MsaT038810.1:CDS
GATTCTTCTTTGCCTCCAAG+TGG 0.606757 7:-80960018 MsaT038810.1:CDS
GCTCAAGTTTCCTGAGTCGC+CGG 0.607346 7:-80957254 MsaT038810.1:CDS
CTGCAGGAGAAACAACAGCT+AGG 0.608141 7:+80960166 None:intergenic
CGGCTTGCATAACTCGTAGC+CGG 0.608900 7:+80957235 None:intergenic
ACCAGAACTGGCAAGGTCCG+AGG 0.616384 7:+80960720 None:intergenic
GCAAACCTCGGATCAGATCA+CGG 0.617384 7:+80957215 None:intergenic
CGATACTGATCTCATGAGAA+CGG 0.617988 7:-80960304 MsaT038810.1:CDS
TGGGAGCAATAGTAACAAGA+TGG 0.618283 7:-80957011 MsaT038810.1:CDS
GGAAAGGGTTGCAGAGACAA+AGG 0.620021 7:-80960748 MsaT038810.1:CDS
CCTGGCCTCCAGTAGAGAAG+TGG 0.620661 7:-80960559 MsaT038810.1:CDS
ACAGCATAGGTAGAAATGGA+TGG 0.626692 7:+80959485 None:intergenic
TACCTCAACCAGAACTGGCA+AGG 0.626830 7:+80960713 None:intergenic
AAAGCATGCAGATCTCCGCC+CGG 0.630026 7:+80959412 None:intergenic
TTGCTGAGCCTACAACAGCT+CGG 0.630073 7:-80957456 MsaT038810.1:CDS
TCGTGAGTTCTGATAAGGGT+AGG 0.631078 7:+80957655 None:intergenic
GCTCGGTCGATGTCCTTCGT+TGG 0.631096 7:-80957439 MsaT038810.1:CDS
TATTAAAGGAAATGTTAGAG+GGG 0.632017 7:-80959857 MsaT038810.1:CDS
TGTGGACTGACATTTCCACT+TGG 0.635759 7:+80960003 None:intergenic
TCCAGTTGCTGTCATCGCTG+AGG 0.643002 7:+80959782 None:intergenic
CTGAGCCACTTCTCTACTGG+AGG 0.643743 7:+80960554 None:intergenic
ACGAGCGCCTGAAAACGGTA+AGG 0.643968 7:+80960104 None:intergenic
AGAACCGTCTTGGAGTGAAG+AGG 0.649712 7:-80957177 MsaT038810.1:CDS
GCAAGCCGTGATCTGATCCG+AGG 0.650233 7:-80957220 MsaT038810.1:CDS
GCTCATTGTTCTCACAACAC+TGG 0.651462 7:+80959963 None:intergenic
ATAAAGGAAATGACCCTAGG+TGG 0.651834 7:-80959729 MsaT038810.1:CDS
CTCATGAGATCAGTATCGAT+AGG 0.652434 7:+80960309 None:intergenic
AACCGTCTTGGAGTGAAGAG+GGG 0.657915 7:-80957175 MsaT038810.1:CDS
GTACTATCAACGCTACTGTG+TGG 0.658348 7:+80959985 None:intergenic
CACATAAAGGAAATGACCCT+AGG 0.660669 7:-80959732 MsaT038810.1:CDS
GGATGTTTCATGTGCCCGTG+CGG 0.664533 7:-80960637 MsaT038810.1:CDS
TACCAAACATGAGAATCTGT+CGG 0.665055 7:+80959447 None:intergenic
CTGAAGAATCAAATGACATG+CGG 0.676186 7:-80960134 MsaT038810.1:CDS
AATAGGTCAGAACAAATCTG+AGG 0.679189 7:-80960271 MsaT038810.1:CDS
TCAGTATCGATAGGTTCTGG+GGG 0.696999 7:+80960318 None:intergenic
AGCCGTTGAAAATACTGTTG+GGG 0.701235 7:-80957035 MsaT038810.1:CDS
AGTCGAGCAAGTGATAGCAG+TGG 0.705885 7:-80959805 MsaT038810.1:CDS
ATTTCTCAGAGTATGCTGCA+CGG 0.724709 7:-80959366 MsaT038810.1:intron
TAATAATGAGATGAAGTCTG+GGG 0.725716 7:-80956981 MsaT038810.1:CDS
AATAATGAGATGAAGTCTGG+GGG 0.729608 7:-80956980 MsaT038810.1:CDS
ACCCTTATCAGAACTCACGA+TGG 0.733553 7:-80957652 MsaT038810.1:CDS
AAGCTGGTCAGAGACTAACG+GGG 0.740166 7:-80960662 MsaT038810.1:CDS
AGCTGGTCAGAGACTAACGG+GGG 0.762139 7:-80960661 MsaT038810.1:CDS
ATACTCATGAGTACCAACGA+AGG 0.768022 7:+80957426 None:intergenic
TCGTTCTCCTCAGAACCCGG+GGG 0.780728 7:+80960051 None:intergenic
GTAATGGAGTACTGTCCGGG+CGG 0.782265 7:-80959427 MsaT038810.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 80956949 80960772 80956949 ID=MsaG038810
Chr7 mRNA 80956949 80960772 80956949 ID=MsaT038810.1;Parent=MsaG038810
Chr7 exon 80956949 80957828 80956949 ID=MsaT038810.1.exon2;Parent=MsaT038810.1
Chr7 CDS 80956949 80957828 80956949 ID=cds.MsaT038810.1;Parent=MsaT038810.1
Chr7 exon 80959367 80960772 80959367 ID=MsaT038810.1.exon1;Parent=MsaT038810.1
Chr7 CDS 80959367 80960772 80959367 ID=cds.MsaT038810.1;Parent=MsaT038810.1
Gene Sequence

>MsaT038810.1

ATGGAAAGGGTTGCAGAGACAAAGGTACTTCCTCGGACCTTGCCAGTTCTGGTTGAGGTATCTGATGCACACAAAGCTGTAATAAGAGAAGCTGGTCAGAGACTAACGGGGGAGGATGTTTCATGTGCCCGTGCGGTTTCAGCAAGAGAATTGAATCAGTTTTCAAAAGCACAGGATGGCCCTATGACACTCCTGGCCTCCAGTAGAGAAGTGGCTCAGTTGTCAAATGCAAGAATTCTTTTGGTAAGAGAAGATACAGGATTCAATACGCGATCTTCTGAAAAACTTGTCTCGGCTGCACCTACAAGAACACCAAAAGGAAAAGCCTCTTTTCCAGACCACAAAGAACTCTTGCCTGATATCGAGATGTTGAAGAGCAGCAGTGATTCTTTTGGGGAAACTGATCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTATCGATACTGATCTCATGAGAACGGTTTATGTACCAATAGGTCAGAACAAATCTGAGGCTGGATGCATAACGAAGAGCACGTCCTTGAAGGGTCCTTTCCTAGAAGATCTTTCGATTCGTAATCTCACTAAGAAACCAATCCTAGCTGTTGTTTCTCCTGCAGAAAGTATGGCTGAAGAATCAAATGACATGCGGAACTCAGCCTTACCGTTTTCAGGCGCTCGTGCATCGCAGAATACCGAGAACTGTCTACTTCCCCCGGGTTCTGAGGAGAACGATTGCGTTTGGGATTCTTCTTTGCCTCCAAGTGGAAATGTCAGTCCACACAGTAGCGTTGATAGTACCAGTGTTGTGAGAACAATGAGCATTGCCAATAGTTGTGCGAGTACATATCGCAGCGATGCATTGACTAGTGATGGCATGCTTAGTATAGACAAAAATTGTGATAGTATTAAAGGAAATGTTAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGTAACATCACTGCTAGTGCCAGTAAACCACATAAAGGAAATGACCCTAGGTGGAAGGCTATCCTTGCCGTCCGAGCACGGGATGGAAATTTGGGCATGAGTCATTTTAAGTTACTTAGACGACTTGGTTGTGGTGATATTGGAAGCGTGTATCTCTCCGAGTTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTATCTGCCAGAAAGAAGCTGATTAGAGCGCAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCTATGCTGTATACACATTTTGAGACCGACAGATTCTCATGTTTGGTAATGGAGTACTGTCCGGGCGGAGATCTGCATGCTTTAAGGCAACGGCAACCAGGGAAACATTTCTCAGAGTATGCTGCACGTTTTTATGCTGCAGAGGTCCTGTTGGCAATTGAATATCTTCACATGCTCGGAGTTGTTTATCGAGACCTTAAACCTGAAAACGTACTAGTCCGAGAAGACGGTCACATAATGCTCTCGGATTTCGACCTTTCTCTTAGGTGCGTTGTTTCACCTACCCTTATCAGAACTCACGATGGCGACCCTTCAAAACGAGCAGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACATCAGTATGCATTCAGCCTGCCTGTTTTTTGCCGAAGCTTTTTTCTCAGAAAAATAAGAAGTCACGGAAACCTAAACCTGATCCTGGCCTATCAACTGATTCACTTCCGGAACTTCTTGCTGAGCCTACAACAGCTCGGTCGATGTCCTTCGTTGGTACTCATGAGTATCTCGCCCCTGAAATTATCAAAGGAGAAGGCCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTATTGTATGGTAAAACGCCTTTCAAAGGATCAGGAAACCGAGCTACACTGTTCAATGTAGTTGGCCAGCAGCTCAAGTTTCCTGAGTCGCCGGCTACGAGTTATGCAAGCCGTGATCTGATCCGAGGTTTGCTTGCAAAAGAGCCACAGAACCGTCTTGGAGTGAAGAGGGGTGCAACTGAACTCAAACAGCACCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCGGAAATTCCAAGGCCGATGGAAAGTGAACTACCGGCTAAATTTGAAGCCGTTGAAAATACTGTTGGGGTTGGGAGCAATAGTAACAAGATGGTTGGTGGTAATAATGAGATGAAGTCTGGGGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG
Protein sequence

>MsaT038810.1

MERVAETKVLPRTLPVLVEVSDAHKAVIREAGQRLTGEDVSCARAVSARELNQFSKAQDGPMTLLASSREVAQLSNARILLVREDTGFNTRSSEKLVSAAPTRTPKGKASFPDHKELLPDIEMLKSSSDSFGETDPSSFAGASHPPEPIDTDLMRTVYVPIGQNKSEAGCITKSTSLKGPFLEDLSIRNLTKKPILAVVSPAESMAEESNDMRNSALPFSGARASQNTENCLLPPGSEENDCVWDSSLPPSGNVSPHSSVDSTSVVRTMSIANSCASTYRSDALTSDGMLSIDKNCDSIKGNVRGDSLESAKTSASRASDSSGLSDDSNWSNITASASKPHKGNDPRWKAILAVRARDGNLGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLSARKKLIRAQTEREILQLLDHPFLPMLYTHFETDRFSCLVMEYCPGGDLHALRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGAFCVQPACIEPTSVCIQPACFLPKLFSQKNKKSRKPKPDPGLSTDSLPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLAKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMESELPAKFEAVENTVGVGSNSNKMVGGNNEMKSGGGKYLDFEFF*