AlfalfaGEDB | MsaG038883

M. sativa ssp. caerulea / MsaG038883

KEGG: -
GO: -
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038883	RHN47318.1	79.114	158	33	0	1	158	1	158	8.42e-92	274

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038883	sp\|Q75HE5\|NAC2_ORYSJ	39.098	133	75	4	4	133	11	140	5.84e-23	95.9

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038883	tr\|A0A396H3F5\|A0A396H3F5_MEDTR	79.114	158	33	0	1	158	1	158	4.02e-92	274

TFs/TRs:

Gene ID	Type	Classification
MsaG038883	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000070	MsaG038883	0.803682	5.226195e-49	7.684787e-47
MsaG000083	MsaG038883	0.817937	4.433129e-52	9.238085e-50
MsaG000113	MsaG038883	0.849437	6.148147e-60	3.269029e-57
MsaG000496	MsaG038883	0.817427	5.771148e-52	1.186940e-49
MsaG000643	MsaG038883	0.802689	8.370332e-49	1.202911e-46
MsaG001004	MsaG038883	0.810802	1.646469e-50	2.867306e-48
MsaG001323	MsaG038883	0.820582	1.114974e-52	2.490255e-50
MsaG001600	MsaG038883	0.801302	1.608642e-48	2.239856e-46
MsaG003072	MsaG038883	0.825324	8.855191e-54	2.247484e-51
MsaG003140	MsaG038883	0.816475	9.420529e-52	1.890503e-49
MsaG003311	MsaG038883	0.827770	2.325902e-54	6.319656e-52
MsaG003589	MsaG038883	0.814249	2.929393e-51	5.556714e-49
MsaG003859	MsaG038883	0.833063	1.198048e-55	3.788950e-53
MsaG003972	MsaG038883	0.831850	2.386638e-55	7.286210e-53
MsaG003973	MsaG038883	0.802964	7.349735e-49	1.062924e-46
MsaG003975	MsaG038883	0.802693	8.352890e-49	1.200533e-46
MsaG005528	MsaG038883	0.812991	5.523894e-51	1.015313e-48
MsaG005614	MsaG038883	0.813917	3.463797e-51	6.516200e-49
MsaG006013	MsaG038883	0.812673	6.479615e-51	1.181558e-48
MsaG006160	MsaG038883	0.800444	2.403801e-48	3.282866e-46
MsaG006120	MsaG038883	0.807521	8.247588e-50	1.326844e-47
MsaG006480	MsaG038883	0.823708	2.116702e-53	5.140774e-51
MsaG006681	MsaG038883	0.833798	7.873329e-56	2.544327e-53
MsaG006857	MsaG038883	0.827167	3.240005e-54	8.655562e-52
MsaG007117	MsaG038883	0.816096	1.143955e-51	2.273608e-49
MsaG007325	MsaG038883	0.809725	2.804609e-50	4.757719e-48
MsaG007583	MsaG038883	0.813290	4.752857e-51	8.801134e-49
MsaG007847	MsaG038883	0.836932	1.282395e-56	4.552167e-54
MsaG007850	MsaG038883	0.818845	2.767318e-52	5.904037e-50
MsaG008288	MsaG038883	0.820953	9.167914e-53	2.067937e-50
MsaG008613	MsaG038883	0.805106	2.647175e-49	4.023190e-47
MsaG008704	MsaG038883	0.819578	1.888175e-52	4.106423e-50
MsaG009010	MsaG038883	0.801124	1.748330e-48	2.424593e-46
MsaG009140	MsaG038883	0.809589	2.999085e-50	5.071129e-48
MsaG010572	MsaG038883	0.805270	2.446939e-49	3.733012e-47
MsaG011336	MsaG038883	0.802777	8.030118e-49	1.156315e-46
MsaG011881	MsaG038883	0.819846	1.640853e-52	3.594018e-50
MsaG012188	MsaG038883	0.816652	8.602470e-52	1.734171e-49
MsaG012262	MsaG038883	0.803945	4.611965e-49	6.822998e-47
MsaG012575	MsaG038883	0.815443	1.596890e-51	3.121718e-49
MsaG041930	MsaG038883	0.803069	6.991239e-49	1.013558e-46
MsaG042823	MsaG038883	0.806699	1.229268e-49	1.939493e-47
MsaG043880	MsaG038883	0.817038	7.051538e-52	1.435842e-49
MsaG044120	MsaG038883	0.801815	1.264018e-48	1.780661e-46
MsaG044313	MsaG038883	0.811053	1.454037e-50	2.547738e-48
MsaG044886	MsaG038883	0.807166	9.799352e-50	1.563208e-47
MsaG045416	MsaG038883	0.805780	1.915210e-49	2.956784e-47
MsaG045870	MsaG038883	0.810580	1.838402e-50	3.184144e-48
MsaG046153	MsaG038883	0.806734	1.208220e-49	1.907867e-47
MsaG046281	MsaG038883	0.828017	2.030691e-54	5.555765e-52
MsaG046289	MsaG038883	0.826930	3.690304e-54	9.793562e-52
MsaG046329	MsaG038883	0.809099	3.815508e-50	6.375815e-48
MsaG046321	MsaG038883	0.820952	9.174191e-53	2.069289e-50
MsaG047016	MsaG038883	0.808054	6.361261e-50	1.036565e-47
MsaG002462	MsaG038883	0.801868	1.232669e-48	1.738623e-46
MsaG008721	MsaG038883	0.821151	8.258591e-53	1.872608e-50
MsaG011916	MsaG038883	0.815516	1.538396e-51	3.012903e-49
MsaG028136	MsaG038883	0.813097	5.236950e-51	9.651268e-49
MsaG026802	MsaG038883	0.820322	1.277811e-52	2.834627e-50
MsaG026788	MsaG038883	0.807434	8.606360e-50	1.381670e-47
MsaG032466	MsaG038883	0.823844	1.968357e-53	4.797830e-51
MsaG033379	MsaG038883	0.814717	2.310287e-51	4.434119e-49
MsaG030973	MsaG038883	0.827676	2.450013e-54	6.639187e-52
MsaG033622	MsaG038883	0.823639	2.197330e-53	5.326527e-51
MsaG030783	MsaG038883	0.803381	6.029265e-49	8.804207e-47
MsaG031525	MsaG038883	0.806881	1.125602e-49	1.783493e-47
MsaG034538	MsaG038883	0.803258	6.392725e-49	9.308341e-47
MsaG032459	MsaG038883	0.813389	4.521933e-51	8.394664e-49
MsaG036522	MsaG038883	0.800534	2.303984e-48	3.152992e-46
MsaG038883	MsaG039794	0.817185	6.536946e-52	1.336110e-49
MsaG038883	MsaG035492	0.802656	8.502225e-49	1.220972e-46
MsaG038883	MsaG038282	0.836050	2.145885e-56	7.417474e-54
MsaG038883	MsaG042294	0.808959	4.086540e-50	6.805683e-48
MsaG013578	MsaG038883	0.821075	8.594960e-53	1.944966e-50
MsaG015145	MsaG038883	0.801636	1.375062e-48	1.929206e-46
MsaG015317	MsaG038883	0.834768	4.508435e-56	1.499782e-53
MsaG016220	MsaG038883	0.802830	7.831056e-49	1.129027e-46
MsaG016250	MsaG038883	0.809864	2.618153e-50	4.456431e-48
MsaG016429	MsaG038883	0.803030	7.121894e-49	1.031555e-46
MsaG016796	MsaG038883	0.817435	5.746857e-52	1.182201e-49
MsaG017348	MsaG038883	0.812845	5.944210e-51	1.088580e-48
MsaG017459	MsaG038883	0.820881	9.526003e-53	2.144481e-50
MsaG017616	MsaG038883	0.811187	1.360247e-50	2.391237e-48
MsaG017640	MsaG038883	0.817197	6.497727e-52	1.328501e-49
MsaG018074	MsaG038883	0.806102	1.639899e-49	2.551103e-47
MsaG018083	MsaG038883	0.813155	5.086693e-51	9.387822e-49
MsaG018876	MsaG038883	0.803569	5.514329e-49	8.087211e-47
MsaG019906	MsaG038883	0.808294	5.659385e-50	9.275225e-48
MsaG020091	MsaG038883	0.830544	4.978275e-55	1.463270e-52
MsaG020345	MsaG038883	0.801184	1.699704e-48	2.360362e-46
MsaG020469	MsaG038883	0.813680	3.905138e-51	7.302643e-49
MsaG020648	MsaG038883	0.831220	3.405200e-55	1.020525e-52
MsaG022193	MsaG038883	0.821813	5.816712e-53	1.342209e-50
MsaG023664	MsaG038883	0.808283	5.690018e-50	9.322967e-48
MsaG023812	MsaG038883	0.808293	5.660770e-50	9.277383e-48
MsaG023967	MsaG038883	0.838293	5.761796e-57	2.132401e-54
MsaG024573	MsaG038883	0.813508	4.259056e-51	7.930189e-49
MsaG025326	MsaG038883	0.826200	5.498726e-54	1.429934e-51
MsaG025418	MsaG038883	0.802594	8.753643e-49	1.255304e-46
MsaG025658	MsaG038883	0.819881	1.611202e-52	3.532292e-50
MsaG026601	MsaG038883	0.802710	8.288745e-49	1.191737e-46
MsaG026794	MsaG038883	0.831153	3.536756e-55	1.057930e-52
MsaG027829	MsaG038883	0.811680	1.064603e-50	1.894222e-48
MsaG027898	MsaG038883	0.800603	2.231688e-48	3.058770e-46
MsaG027991	MsaG038883	0.800036	2.907606e-48	3.934423e-46
MsaG028435	MsaG038883	0.832181	1.978268e-55	6.097804e-53
MsaG028513	MsaG038883	0.800356	2.504095e-48	3.413044e-46
MsaG028590	MsaG038883	0.820890	9.480297e-53	2.134726e-50
MsaG028683	MsaG038883	0.814882	2.123991e-51	4.093716e-49
MsaG029044	MsaG038883	0.809700	2.839645e-50	4.814234e-48
MsaG029210	MsaG038883	0.808499	5.120276e-50	8.433121e-48
MsaG029370	MsaG038883	0.800862	1.976672e-48	2.725088e-46
MsaG029381	MsaG038883	0.822538	3.956703e-53	9.309644e-51
MsaG029852	MsaG038883	0.802625	8.627613e-49	1.238104e-46
MsaG030046	MsaG038883	0.811743	1.031296e-50	1.837839e-48
MsaG030578	MsaG038883	0.811655	1.077663e-50	1.916309e-48
MsaG030618	MsaG038883	0.805276	2.440018e-49	3.722962e-47
MsaG031154	MsaG038883	0.822593	3.842464e-53	9.054313e-51
MsaG031787	MsaG038883	0.804020	4.449118e-49	6.593748e-47
MsaG032765	MsaG038883	0.806635	1.267673e-49	1.997093e-47
MsaG035219	MsaG038883	0.800061	2.873677e-48	3.890760e-46
MsaG039649	MsaG038883	0.813044	5.377769e-51	9.897740e-49
MsaG040506	MsaG038883	0.812766	6.182385e-51	1.129977e-48
MsaG041010	MsaG038883	0.800566	2.270512e-48	3.109378e-46
MsaG041066	MsaG038883	0.834837	4.331565e-56	1.443870e-53
MsaG041303	MsaG038883	0.830708	4.542240e-55	1.341353e-52
MsaG041370	MsaG038883	0.801849	1.244112e-48	1.753965e-46
MsaG041532	MsaG038883	0.804868	2.967608e-49	4.485359e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038883	MtrunA17_Chr7g0251661	79.114	158	33	0	1	158	1	158	7.74e-96	274
MsaG038883	MtrunA17_Chr7g0251671	71.975	157	44	0	1	157	1	157	1.46e-81	238
MsaG038883	MtrunA17_Chr7g0251651	63.043	184	60	3	3	178	11	194	1.05e-80	237
MsaG038883	MtrunA17_Chr3g0124761	34.868	152	89	5	6	154	3	147	4.41e-22	90.1
MsaG038883	MtrunA17_Chr3g0139331	35.338	133	80	5	7	135	8	138	1.44e-21	89.7
MsaG038883	MtrunA17_Chr6g0461661	37.692	130	75	4	8	133	16	143	2.22e-21	89.4
MsaG038883	MtrunA17_Chr7g0253011	36.364	132	76	5	8	133	15	144	1.98e-20	87.0
MsaG038883	MtrunA17_Chr7g0252971	31.544	149	89	4	7	144	5	151	1.07e-19	84.3
MsaG038883	MtrunA17_Chr1g0147421	35.821	134	79	5	7	135	24	155	4.70e-19	82.8
MsaG038883	MtrunA17_Chr8g0359921	31.206	141	88	5	6	143	10	144	6.38e-19	82.4
MsaG038883	MtrunA17_Chr2g0318101	32.353	136	86	4	2	133	7	140	7.28e-19	82.4
MsaG038883	MtrunA17_Chr4g0042561	30.968	155	97	6	4	154	3	151	9.73e-19	80.9
MsaG038883	MtrunA17_Chr4g0047841	34.375	128	78	4	10	133	15	140	9.75e-19	82.0
MsaG038883	MtrunA17_Chr3g0130731	33.088	136	84	4	6	138	3	134	1.03e-18	81.3
MsaG038883	MtrunA17_Chr2g0318081	31.206	141	88	5	6	143	12	146	1.24e-18	81.6
MsaG038883	MtrunA17_Chr2g0309891	28.804	184	108	5	6	168	2	183	1.81e-18	81.3
MsaG038883	MtrunA17_Chr6g0484441	34.615	130	79	4	7	133	2	128	1.85e-18	80.9
MsaG038883	MtrunA17_Chr7g0214071	33.835	133	79	5	5	133	10	137	2.57e-18	79.7
MsaG038883	MtrunA17_Chr8g0384721	32.090	134	84	4	8	138	5	134	3.92e-18	79.7
MsaG038883	MtrunA17_Chr3g0144271	37.879	132	75	6	7	133	20	149	4.08e-18	80.9
MsaG038883	MtrunA17_Chr5g0433781	33.588	131	83	3	6	133	2	131	7.37e-18	80.1
MsaG038883	MtrunA17_Chr2g0316971	33.594	128	79	5	10	133	23	148	9.71e-18	79.3
MsaG038883	MtrunA17_Chr7g0217711	32.692	156	99	5	3	155	12	164	9.73e-18	76.6
MsaG038883	MtrunA17_Chr6g0453451	33.083	133	83	4	4	133	14	143	1.36e-17	78.6
MsaG038883	MtrunA17_Chr5g0417791	31.126	151	94	6	8	154	1	145	1.45e-17	77.8
MsaG038883	MtrunA17_Chr5g0417001	32.374	139	87	5	7	141	12	147	2.86e-17	78.2
MsaG038883	MtrunA17_Chr3g0109821	32.824	131	84	3	6	133	2	131	4.36e-17	78.2
MsaG038883	MtrunA17_Chr6g0481091	33.333	129	82	3	8	133	4	131	9.16e-17	75.1
MsaG038883	MtrunA17_Chr4g0060931	31.818	132	84	5	5	133	12	140	9.74e-17	76.6
MsaG038883	MtrunA17_Chr3g0091921	32.308	130	82	5	7	133	13	139	1.40e-16	75.5
MsaG038883	MtrunA17_Chr2g0311651	33.813	139	82	6	3	133	14	150	3.29e-16	74.7
MsaG038883	MtrunA17_Chr6g0453131	31.852	135	87	3	9	140	14	146	3.39e-16	75.1
MsaG038883	MtrunA17_Chr7g0217721	33.582	134	83	5	3	133	12	142	3.49e-16	74.7
MsaG038883	MtrunA17_Chr5g0442771	34.091	132	79	5	7	133	16	144	3.57e-16	74.3
MsaG038883	MtrunA17_Chr2g0309331	31.387	137	90	3	1	133	1	137	3.86e-16	74.7
MsaG038883	MtrunA17_Chr8g0385991	30.370	135	86	4	3	133	7	137	4.96e-16	72.8
MsaG038883	MtrunA17_Chr2g0326361	30.667	150	94	6	10	154	14	158	8.14e-16	73.6
MsaG038883	MtrunA17_Chr8g0361731	31.884	138	87	5	7	140	12	146	8.94e-16	73.9
MsaG038883	MtrunA17_Chr1g0197351	32.283	127	82	3	10	133	42	167	9.70e-16	73.9
MsaG038883	MtrunA17_Chr2g0311661	33.813	139	82	6	2	133	14	149	2.79e-15	72.0
MsaG038883	MtrunA17_Chr3g0130101	32.836	134	85	4	3	133	1	132	4.42e-15	71.6
MsaG038883	MtrunA17_Chr1g0201021	31.746	126	82	3	13	135	22	146	4.72e-15	72.0
MsaG038883	MtrunA17_Chr7g0263931	30.075	133	87	4	5	133	6	136	5.35e-15	71.2
MsaG038883	MtrunA17_Chr1g0183741	28.402	169	108	6	1	162	1	163	6.30e-15	70.9
MsaG038883	MtrunA17_Chr7g0261411	31.387	137	88	4	1	133	1	135	2.46e-14	69.3
MsaG038883	MtrunA17_Chr4g0017921	29.630	189	110	8	1	172	1	183	2.89e-14	69.3
MsaG038883	MtrunA17_Chr5g0428991	34.646	127	79	3	10	133	25	150	4.46e-14	69.3
MsaG038883	MtrunA17_Chr2g0312321	28.472	144	97	4	3	144	4	143	6.42e-14	68.2
MsaG038883	MtrunA17_Chr5g0405211	31.250	128	83	4	10	133	8	134	6.58e-14	68.6
MsaG038883	MtrunA17_Chr8g0345671	30.070	143	94	4	9	146	10	151	6.73e-14	68.6
MsaG038883	MtrunA17_Chr4g0018391	30.469	128	84	4	10	133	7	133	6.81e-14	68.6
MsaG038883	MtrunA17_Chr4g0076731	29.839	124	82	3	13	133	57	178	1.19e-13	67.8
MsaG038883	MtrunA17_Chr3g0128151	33.071	127	81	3	10	133	22	147	1.27e-13	68.2
MsaG038883	MtrunA17_Chr8g0372121	30.469	128	84	4	10	133	6	132	1.62e-13	67.0
MsaG038883	MtrunA17_Chr1g0197361	31.343	134	84	5	13	142	11	140	2.65e-13	67.0
MsaG038883	MtrunA17_Chr5g0398971	28.906	128	87	3	10	133	7	134	3.19e-13	66.6
MsaG038883	MtrunA17_Chr8g0345701	26.573	143	83	5	10	133	7	146	5.16e-13	63.9
MsaG038883	MtrunA17_Chr8g0364791	30.709	127	84	3	10	133	6	131	5.24e-13	66.2
MsaG038883	MtrunA17_Chr1g0200561	29.323	133	89	4	5	133	14	145	8.75e-13	65.1
MsaG038883	MtrunA17_Chr8g0345711	30.882	136	88	5	10	140	12	146	1.28e-12	62.8
MsaG038883	MtrunA17_Chr8g0345691	29.452	146	89	5	10	146	12	152	5.49e-12	63.2
MsaG038883	MtrunA17_Chr2g0321631	30.065	153	98	4	9	154	3	153	8.01e-12	62.0
MsaG038883	MtrunA17_Chr3g0092671	28.000	125	85	3	13	133	8	131	1.82e-11	61.6
MsaG038883	MtrunA17_Chr8g0345731	28.873	142	92	6	10	143	24	164	9.36e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038883	AT5G13180.1	37.037	135	76	4	3	133	7	136	8.40e-24	94.4
MsaG038883	AT5G18270.1	37.209	129	76	4	8	133	19	145	8.30e-22	90.5
MsaG038883	AT5G18270.2	36.434	129	77	4	8	133	19	145	1.52e-21	89.7
MsaG038883	AT3G10500.1	35.036	137	84	4	10	142	9	144	3.50e-21	90.1
MsaG038883	AT5G04410.1	35.433	127	78	3	10	133	9	134	4.25e-21	90.1
MsaG038883	AT1G77450.1	33.758	157	94	5	1	154	1	150	6.22e-21	87.0
MsaG038883	AT5G63790.1	33.824	136	83	4	6	138	46	177	2.30e-20	86.3
MsaG038883	AT5G63790.2	33.824	136	83	4	6	138	56	187	2.51e-20	86.3
MsaG038883	AT5G08790.1	33.088	136	84	4	6	138	3	134	3.35e-20	85.5
MsaG038883	AT1G76420.1	36.641	131	77	5	7	133	19	147	3.46e-20	86.3
MsaG038883	AT2G24430.2	35.878	131	78	5	7	133	13	141	6.06e-20	85.1
MsaG038883	AT2G24430.1	35.878	131	78	5	7	133	13	141	6.06e-20	85.1
MsaG038883	AT3G04070.2	31.690	142	88	4	10	144	10	149	9.60e-20	85.1
MsaG038883	AT3G04070.1	31.690	142	88	4	10	144	10	149	1.51e-19	84.7
MsaG038883	AT1G61110.1	33.858	127	79	3	10	133	16	140	3.96e-19	83.2
MsaG038883	AT5G53950.1	31.013	158	84	6	10	144	17	172	1.84e-18	81.6
MsaG038883	AT1G01720.1	32.836	134	83	4	8	138	5	134	1.94e-18	80.9
MsaG038883	AT3G29035.1	34.615	130	79	5	7	133	21	147	1.97e-18	81.3
MsaG038883	AT3G15500.1	31.206	141	88	5	6	143	10	144	3.14e-18	80.5
MsaG038883	AT5G61430.1	30.857	175	88	7	7	151	13	184	3.27e-18	80.9
MsaG038883	AT3G10490.1	34.074	135	85	4	2	133	19	152	4.91e-18	79.0
MsaG038883	AT5G07680.1	33.333	132	82	5	5	133	12	140	7.94e-18	79.7
MsaG038883	AT1G52890.1	31.206	141	88	5	6	143	10	144	9.55e-18	79.3
MsaG038883	AT4G27410.2	31.298	131	84	4	6	133	10	137	1.07e-17	79.0
MsaG038883	AT5G07680.2	34.109	129	79	5	8	133	1	126	1.26e-17	79.0
MsaG038883	AT3G04060.1	33.333	129	81	4	8	133	18	144	1.63e-17	79.0
MsaG038883	AT5G39610.1	33.088	136	85	5	1	133	11	143	1.86e-17	78.2
MsaG038883	AT5G17260.1	32.824	131	84	3	6	133	2	131	2.14e-17	79.3
MsaG038883	AT2G33480.2	34.615	130	74	5	8	133	13	135	2.21e-17	77.8
MsaG038883	AT2G33480.1	34.615	130	74	5	8	133	13	135	2.25e-17	77.8
MsaG038883	AT3G10480.1	34.074	135	85	4	2	133	19	152	3.34e-17	78.6
MsaG038883	AT3G10480.2	34.074	135	85	4	2	133	19	152	3.40e-17	78.6
MsaG038883	AT3G15170.1	32.812	128	80	5	10	133	20	145	3.95e-17	77.4
MsaG038883	AT3G03200.1	33.588	131	83	3	6	133	2	131	4.53e-17	78.2
MsaG038883	AT3G17730.1	33.588	131	83	3	6	133	2	131	4.79e-17	76.3
MsaG038883	AT3G10490.2	34.074	135	85	4	2	133	19	152	4.82e-17	78.2
MsaG038883	AT1G65910.1	32.061	131	85	3	6	133	2	131	6.28e-17	77.8
MsaG038883	AT3G15510.1	33.065	124	77	4	14	133	21	142	7.71e-17	77.0
MsaG038883	AT3G18400.1	31.056	161	103	6	7	162	2	159	9.84e-17	76.6
MsaG038883	AT1G54330.1	32.824	131	84	3	6	133	2	131	2.02e-16	75.5
MsaG038883	AT1G69490.1	32.283	127	80	4	10	133	9	132	3.00e-16	74.7
MsaG038883	AT5G39820.1	29.545	132	87	4	13	140	23	152	5.00e-16	74.7
MsaG038883	AT1G34180.1	31.746	126	82	3	13	135	19	143	5.46e-16	75.1
MsaG038883	AT1G34180.3	31.746	126	82	3	13	135	19	143	9.24e-16	74.3
MsaG038883	AT2G43000.1	33.846	130	79	5	7	133	16	141	9.36e-16	73.2
MsaG038883	AT3G12910.1	36.090	133	74	5	8	133	20	148	1.01e-15	73.6
MsaG038883	AT1G34190.1	31.387	137	85	4	13	141	19	154	1.07e-15	74.3
MsaG038883	AT1G26870.1	31.008	129	81	5	10	133	16	141	1.55e-15	73.6
MsaG038883	AT4G36160.1	29.927	137	91	4	1	133	1	136	2.96e-15	72.8
MsaG038883	AT4G36160.3	29.927	137	91	4	1	133	1	136	2.96e-15	72.8
MsaG038883	AT4G36160.2	29.927	137	91	4	1	133	5	140	3.04e-15	72.8
MsaG038883	AT4G27410.3	28.767	146	85	5	6	133	10	154	3.22e-15	72.4
MsaG038883	AT4G17980.1	29.630	135	91	3	10	140	6	140	6.11e-15	70.9
MsaG038883	AT4G17980.2	28.986	138	94	3	10	143	6	143	1.45e-14	70.1
MsaG038883	AT5G66300.1	32.031	128	82	4	10	133	12	138	1.45e-14	70.1
MsaG038883	AT1G33060.1	33.858	127	80	4	10	133	24	149	1.76e-14	70.9
MsaG038883	AT1G33060.2	33.858	127	80	4	10	133	24	149	1.96e-14	70.9
MsaG038883	AT2G27300.1	33.577	137	86	5	1	135	7	140	2.39e-14	70.1
MsaG038883	AT1G79580.3	28.676	136	93	3	2	133	9	144	3.43e-14	69.7
MsaG038883	AT1G79580.5	28.676	136	93	3	2	133	9	144	3.43e-14	69.7
MsaG038883	AT1G79580.4	28.676	136	93	3	2	133	9	144	3.43e-14	69.7
MsaG038883	AT1G79580.2	28.676	136	93	3	2	133	9	144	3.43e-14	69.7
MsaG038883	AT1G79580.1	28.676	136	93	3	2	133	9	144	3.43e-14	69.7
MsaG038883	AT5G46590.1	29.134	127	87	2	10	133	6	132	3.67e-14	69.3
MsaG038883	AT5G46590.2	29.134	127	87	2	10	133	6	132	3.88e-14	68.9
MsaG038883	AT5G62380.2	29.008	131	82	5	10	133	7	133	4.78e-14	69.3
MsaG038883	AT5G62380.1	29.008	131	82	5	10	133	7	133	4.78e-14	69.3
MsaG038883	AT1G34180.2	29.710	138	81	4	13	135	19	155	6.38e-14	69.3
MsaG038883	AT4G35580.1	33.071	127	81	3	10	133	9	134	8.90e-14	68.9
MsaG038883	AT1G34180.4	29.710	138	81	4	13	135	19	155	1.07e-13	68.6
MsaG038883	AT4G35580.3	33.071	127	81	3	10	133	9	134	1.11e-13	68.6
MsaG038883	AT4G35580.2	33.071	127	81	3	10	133	9	134	1.14e-13	68.6
MsaG038883	AT4G10350.1	32.353	136	87	4	10	141	9	143	1.16e-13	68.2
MsaG038883	AT1G33280.1	32.308	130	83	4	10	135	8	136	1.42e-13	67.8
MsaG038883	AT2G18060.3	30.469	128	84	4	10	133	9	135	1.81e-13	67.8
MsaG038883	AT2G18060.1	30.469	128	84	4	10	133	9	135	1.81e-13	67.8
MsaG038883	AT3G12977.1	28.148	135	91	4	2	133	10	141	1.92e-13	67.0
MsaG038883	AT5G24590.2	31.496	127	84	2	10	133	13	139	2.71e-13	67.4
MsaG038883	AT1G56010.2	29.412	136	89	4	2	133	11	143	5.01e-13	66.2
MsaG038883	AT2G02450.1	28.226	124	84	3	13	133	54	175	6.49e-13	66.2
MsaG038883	AT5G64060.1	29.771	131	88	4	6	133	2	131	1.17e-12	65.5
MsaG038883	AT2G02450.2	28.226	124	84	3	13	133	54	175	1.17e-12	65.5
MsaG038883	AT5G14000.2	27.007	137	94	4	3	136	8	141	1.39e-12	62.8
MsaG038883	AT1G32870.1	30.709	127	86	2	10	135	10	135	2.95e-12	64.3
MsaG038883	AT1G32870.2	30.709	127	86	2	10	135	10	135	3.00e-12	64.3
MsaG038883	AT5G04395.1	28.758	153	93	5	1	137	19	171	3.03e-12	62.4
MsaG038883	AT1G32870.3	30.709	127	86	2	10	135	46	171	3.03e-12	64.3
MsaG038883	AT1G71930.2	28.906	128	86	4	10	133	9	135	3.62e-12	63.9
MsaG038883	AT1G71930.1	28.906	128	86	4	10	133	9	135	3.62e-12	63.9
MsaG038883	AT1G02230.1	26.708	161	108	4	11	164	4	161	6.28e-12	63.2
MsaG038883	AT5G14000.1	27.007	137	94	4	3	136	8	141	9.37e-12	61.6
MsaG038883	AT3G49530.2	28.346	127	88	2	10	133	13	139	1.45e-11	62.4
MsaG038883	AT3G49530.1	28.346	127	88	2	10	133	13	139	1.59e-11	62.4
MsaG038883	AT2G46770.1	25.676	148	104	5	4	146	10	156	8.98e-11	60.1

Find 46 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGATCTACCTGCTGGATTC+AGG	0.237662	7:-81955510	MsaT038883.1:CDS
GAACAGTCGGTTCGAAAATA+TGG	0.258410	7:-81955004	MsaT038883.1:CDS
GAAAGAGCACATTTGTTTAC+TGG	0.275802	7:-81954897	MsaT038883.1:CDS
TCAAATTCAGACATGACATT+TGG	0.359524	7:+81955421	None:intergenic
ATTGTATTCCTTACCCTAGT+TGG	0.360335	7:+81954802	None:intergenic
AGTATTATTTCTTTGATCTC+AGG	0.394952	7:-81955026	MsaT038883.1:CDS
AATATGGACGCAAGACGAGC+TGG	0.462643	7:-81954988	MsaT038883.1:CDS
GACGCAAGACGAGCTGGAAA+TGG	0.464716	7:-81954982	MsaT038883.1:CDS
GCACATTTGTTTACTGGAGT+GGG	0.466777	7:-81954891	MsaT038883.1:CDS
TGAGTTCATGGAGAGGGAGG+AGG	0.476558	7:+81954531	None:intergenic
TCAGACATGACATTTGGAAA+AGG	0.488819	7:+81955427	None:intergenic
GAAGAAGGCCACCACACTAA+TGG	0.491907	7:-81954574	MsaT038883.1:CDS
ACTGAGCCATGGAGGCTGCC+AGG	0.492712	7:-81955388	MsaT038883.1:CDS
ACATGACATTTGGAAAAGGT+TGG	0.502196	7:+81955431	None:intergenic
AAACCTCCTGGCAGCCTCCA+TGG	0.506870	7:+81955382	None:intergenic
AGCACATTTGTTTACTGGAG+TGG	0.509000	7:-81954892	MsaT038883.1:CDS
TGTCAGCTGTTGGTGCCTAT+CGG	0.513489	7:-81954627	MsaT038883.1:intron
AAATTCATGCATCCACCATC+GGG	0.513722	7:+81954846	None:intergenic
TTTGTTTACTGGAGTGGGCA+AGG	0.516244	7:-81954886	MsaT038883.1:CDS
GAGTTCATGGAGAGGGAGGA+GGG	0.516664	7:+81954532	None:intergenic
CAAATTCATGCATCCACCAT+CGG	0.517794	7:+81954845	None:intergenic
GCTGAGCTTGATCTACCTGC+TGG	0.518168	7:-81955517	MsaT038883.1:CDS
GACGAGCTGGAAATGGTGAA+TGG	0.521079	7:-81954975	MsaT038883.1:CDS
ATCGGATCTTTAAGATATGA+AGG	0.521757	7:-81954609	MsaT038883.1:CDS
ATAGGTACTCTTTGCAGCAC+AGG	0.524876	7:-81955050	MsaT038883.1:CDS
AGGTGGCAAAACTGAGAAGA+AGG	0.540768	7:-81954589	MsaT038883.1:CDS
AGTTCATGGAGAGGGAGGAG+GGG	0.541559	7:+81954533	None:intergenic
ATATATTTCAAACTGAGCCA+TGG	0.550284	7:-81955399	MsaT038883.1:CDS
TGCATCCTCCATTAGTGTGG+TGG	0.554338	7:+81954566	None:intergenic
TGAAACATGAGTTCATGGAG+AGG	0.563520	7:+81954524	None:intergenic
GAGAGTAGTTGAAAAGAACA+AGG	0.579351	7:-81954953	MsaT038883.1:CDS
TCTTTGATCTCAGGAACAGT+CGG	0.584323	7:-81955017	MsaT038883.1:CDS
GGATCAAACCTGAATCCAGC+AGG	0.586690	7:+81955502	None:intergenic
ATCGAGCTCTGATGACCCGA+TGG	0.606095	7:-81954861	MsaT038883.1:CDS
ACATGAGTTCATGGAGAGGG+AGG	0.614894	7:+81954528	None:intergenic
GAAACATGAGTTCATGGAGA+GGG	0.632009	7:+81954525	None:intergenic
TCAACAAGTTGACGATCGGT+CGG	0.636753	7:+81955481	None:intergenic
GAAGGCCACCACACTAATGG+AGG	0.652157	7:-81954571	MsaT038883.1:CDS
TCATATCTTAAAGATCCGAT+AGG	0.652337	7:+81954612	None:intergenic
GAGCTCTGATGACCCGATGG+TGG	0.653753	7:-81954858	MsaT038883.1:CDS
GCACTCAACAAGTTGACGAT+CGG	0.655422	7:+81955477	None:intergenic
TATTTCAAACTGAGCCATGG+AGG	0.675314	7:-81955396	MsaT038883.1:CDS
ACTTGCATCCTCCATTAGTG+TGG	0.678198	7:+81954563	None:intergenic
GAGCCATGGAGGCTGCCAGG+AGG	0.693460	7:-81955385	MsaT038883.1:intron
TGGATGCATGAATTTGTCAT+CGG	0.708626	7:-81954838	MsaT038883.1:CDS
GGATCTTTAAGATATGAAGG+TGG	0.724453	7:-81954606	MsaT038883.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	81954536	81955554	81954536	ID=MsaG038883
Chr7	mRNA	81954536	81955554	81954536	ID=MsaT038883.1;Parent=MsaG038883
Chr7	exon	81954536	81954643	81954536	ID=MsaT038883.1.exon3;Parent=MsaT038883.1
Chr7	CDS	81954536	81954643	81954536	ID=cds.MsaT038883.1;Parent=MsaT038883.1
Chr7	exon	81954816	81955075	81954816	ID=MsaT038883.1.exon2;Parent=MsaT038883.1
Chr7	CDS	81954816	81955075	81954816	ID=cds.MsaT038883.1;Parent=MsaT038883.1
Chr7	exon	81955386	81955554	81955386	ID=MsaT038883.1.exon1;Parent=MsaT038883.1
Chr7	CDS	81955386	81955554	81955386	ID=cds.MsaT038883.1;Parent=MsaT038883.1

Gene Sequence

>MsaT038883.1

ATGGCTGTAGCTAATGCTGAGCTTGATCTACCTGCTGGATTCAGGTTTGATCCGACCGATCGTCAACTTGTTGAGTGCTACCTGACGAAGAAAATCTGCAACCAACCTTTTCCAAATGTCATGTCTGAATTTGATATATTTCAAACTGAGCCATGGAGGCTGCCAGGAGGTAATAGGTACTCTTTGCAGCACAGGAAGTATTATTTCTTTGATCTCAGGAACAGTCGGTTCGAAAATATGGACGCAAGACGAGCTGGAAATGGTGAATGGAGAGTAGTTGAAAAGAACAAGGAGTATGCTCATTCAAACAATCAATTGATTGTGAGAAAGAGCACATTTGTTTACTGGAGTGGGCAAGGAAATCGAGCTCTGATGACCCGATGGTGGATGCATGAATTTGTCATCGGTAGAATTTTTGATCCAACTAGGCTGTTGGTGCCTATCGGATCTTTAAGATATGAAGGTGGCAAAACTGAGAAGAAGGCCACCACACTAATGGAGGATGCAAGTGTTTCTGCCCCTCCTCCCTCTCCATGA

Protein sequence

>MsaT038883.1

MAVANAELDLPAGFRFDPTDRQLVECYLTKKICNQPFPNVMSEFDIFQTEPWRLPGGNRYSLQHRKYYFFDLRNSRFENMDARRAGNGEWRVVEKNKEYAHSNNQLIVRKSTFVYWSGQGNRALMTRWWMHEFVIGRIFDPTRLLVPIGSLRYEGGKTEKKATTLMEDASVSAPPPSP*