AlfalfaGEDB | MsaG038885

M. sativa ssp. caerulea / MsaG038885

KEGG: -
GO: -
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038885	XP_024626785.1	75.658	152	35	2	1	151	1	151	2.09e-77	237

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038885	sp\|Q52QH4\|NAC68_ORYSJ	34.028	144	89	4	4	143	15	156	1.18e-19	87.0

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038885	tr\|A0A396H1U7\|A0A396H1U7_MEDTR	77.241	145	32	1	1	145	1	144	1.03e-76	235

TFs/TRs:

Gene ID	Type	Classification
MsaG038885	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG038885	0.828805	1.313033e-54	3.672613e-52
MsaG000412	MsaG038885	0.826836	3.884526e-54	1.028186e-51
MsaG000459	MsaG038885	0.858172	1.930702e-62	1.401122e-59
MsaG000605	MsaG038885	0.830454	5.236367e-55	1.535170e-52
MsaG000847	MsaG038885	0.897215	3.960031e-76	1.726300e-72
MsaG000977	MsaG038885	0.809561	3.040415e-50	5.137577e-48
MsaG001551	MsaG038885	0.826925	3.701021e-54	9.820560e-52
MsaG001878	MsaG038885	0.800299	2.571339e-48	3.500087e-46
MsaG001939	MsaG038885	0.839079	3.617703e-57	1.372194e-54
MsaG002043	MsaG038885	0.823396	2.502943e-53	6.027291e-51
MsaG002225	MsaG038885	0.814903	2.101594e-51	4.052664e-49
MsaG002379	MsaG038885	0.879021	3.678604e-69	6.346406e-66
MsaG002489	MsaG038885	0.868892	9.430806e-66	1.043471e-62
MsaG002558	MsaG038885	0.805316	2.394025e-49	3.656198e-47
MsaG002603	MsaG038885	0.824997	1.057050e-53	2.658786e-51
MsaG003329	MsaG038885	0.812756	6.214893e-51	1.135644e-48
MsaG003384	MsaG038885	0.824823	1.161327e-53	2.907233e-51
MsaG003422	MsaG038885	0.810238	2.176872e-50	3.739161e-48
MsaG003470	MsaG038885	0.841284	9.673044e-58	3.931990e-55
MsaG003665	MsaG038885	0.810840	1.615776e-50	2.816415e-48
MsaG003861	MsaG038885	0.839121	3.529291e-57	1.340327e-54
MsaG004107	MsaG038885	0.858526	1.516255e-62	1.115109e-59
MsaG004184	MsaG038885	0.813385	4.530209e-51	8.409184e-49
MsaG004452	MsaG038885	0.815429	1.607848e-51	3.142089e-49
MsaG004514	MsaG038885	0.830713	4.527472e-55	1.337231e-52
MsaG004531	MsaG038885	0.822834	3.379850e-53	8.016160e-51
MsaG004556	MsaG038885	0.804247	3.993796e-49	5.950111e-47
MsaG004819	MsaG038885	0.818106	4.062167e-52	8.502007e-50
MsaG005073	MsaG038885	0.839243	3.282962e-57	1.251491e-54
MsaG005060	MsaG038885	0.871845	1.024873e-66	1.284699e-63
MsaG005062	MsaG038885	0.862777	7.902837e-64	6.837345e-61
MsaG005100	MsaG038885	0.819524	1.941843e-52	4.217301e-50
MsaG005869	MsaG038885	0.810292	2.120341e-50	3.646739e-48
MsaG006471	MsaG038885	0.845459	7.521884e-59	3.499201e-56
MsaG006620	MsaG038885	0.801181	1.702091e-48	2.363505e-46
MsaG006809	MsaG038885	0.811429	1.206132e-50	2.132896e-48
MsaG006869	MsaG038885	0.808729	4.573705e-50	7.575179e-48
MsaG006924	MsaG038885	0.806630	1.271035e-49	2.002141e-47
MsaG007036	MsaG038885	0.815923	1.249538e-51	2.472636e-49
MsaG007091	MsaG038885	0.820891	9.471182e-53	2.132759e-50
MsaG007182	MsaG038885	0.822115	4.957105e-53	1.153119e-50
MsaG008561	MsaG038885	0.809813	2.685945e-50	4.566192e-48
MsaG008619	MsaG038885	0.827517	2.674148e-54	7.214280e-52
MsaG008678	MsaG038885	0.807168	9.790629e-50	1.561890e-47
MsaG009121	MsaG038885	0.806469	1.373388e-49	2.155257e-47
MsaG011873	MsaG038885	0.808211	5.894199e-50	9.640707e-48
MsaG012163	MsaG038885	0.876962	1.917813e-68	3.010976e-65
MsaG012224	MsaG038885	0.803035	7.105782e-49	1.029338e-46
MsaG012333	MsaG038885	0.842587	4.393567e-58	1.861835e-55
MsaG012294	MsaG038885	0.805250	2.470862e-49	3.767761e-47
MsaG042746	MsaG038885	0.841300	9.578731e-58	3.895626e-55
MsaG043371	MsaG038885	0.829784	7.617993e-55	2.191086e-52
MsaG043725	MsaG038885	0.853653	3.988804e-61	2.455900e-58
MsaG043817	MsaG038885	0.825781	6.906999e-54	1.775369e-51
MsaG044117	MsaG038885	0.820063	1.464485e-52	3.226380e-50
MsaG044200	MsaG038885	0.869560	5.735305e-66	6.525037e-63
MsaG044303	MsaG038885	0.813433	4.422176e-51	8.218635e-49
MsaG044337	MsaG038885	0.800719	2.113067e-48	2.903868e-46
MsaG044688	MsaG038885	0.840613	1.447931e-57	5.762113e-55
MsaG044864	MsaG038885	0.808377	5.434794e-50	8.924784e-48
MsaG045276	MsaG038885	0.816297	1.031831e-51	2.061384e-49
MsaG045284	MsaG038885	0.853536	4.309685e-61	2.642478e-58
MsaG045439	MsaG038885	0.801358	1.566637e-48	2.184158e-46
MsaG045778	MsaG038885	0.811904	9.519531e-51	1.703186e-48
MsaG045819	MsaG038885	0.823675	2.154490e-53	5.227843e-51
MsaG045969	MsaG038885	0.811902	9.528765e-51	1.704743e-48
MsaG046078	MsaG038885	0.842965	3.491256e-58	1.497395e-55
MsaG046123	MsaG038885	0.859074	1.041179e-62	7.816073e-60
MsaG046244	MsaG038885	0.806822	1.157991e-49	1.832283e-47
MsaG046155	MsaG038885	0.849139	7.435653e-60	3.913403e-57
MsaG046167	MsaG038885	0.800673	2.159823e-48	2.965000e-46
MsaG046173	MsaG038885	0.839303	3.167428e-57	1.209698e-54
MsaG046306	MsaG038885	0.846269	4.542968e-59	2.170984e-56
MsaG046364	MsaG038885	0.818834	2.782932e-52	5.935630e-50
MsaG046436	MsaG038885	0.808696	4.648712e-50	7.693257e-48
MsaG046503	MsaG038885	0.850214	3.735776e-60	2.039417e-57
MsaG046603	MsaG038885	0.862613	8.869395e-64	7.624448e-61
MsaG046975	MsaG038885	0.832664	1.503779e-55	4.700443e-53
MsaG047031	MsaG038885	0.814000	3.321578e-51	6.261440e-49
MsaG047097	MsaG038885	0.866355	6.078362e-65	6.062872e-62
MsaG002256	MsaG038885	0.818098	4.078328e-52	8.534028e-50
MsaG001975	MsaG038885	0.809908	2.562007e-50	4.365520e-48
MsaG004075	MsaG038885	0.814530	2.539719e-51	4.851621e-49
MsaG002309	MsaG038885	0.801797	1.274493e-48	1.794700e-46
MsaG001987	MsaG038885	0.805841	1.859549e-49	2.875025e-47
MsaG005167	MsaG038885	0.817501	5.554929e-52	1.144633e-49
MsaG002617	MsaG038885	0.802334	9.897766e-49	1.410970e-46
MsaG007986	MsaG038885	0.824312	1.530035e-53	3.777315e-51
MsaG006148	MsaG038885	0.809836	2.655652e-50	4.517266e-48
MsaG008445	MsaG038885	0.838892	4.042755e-57	1.524493e-54
MsaG014437	MsaG038885	0.805347	2.358847e-49	3.605114e-47
MsaG013025	MsaG038885	0.809780	2.728925e-50	4.635683e-48
MsaG012729	MsaG038885	0.847348	2.311363e-59	1.145087e-56
MsaG014052	MsaG038885	0.805378	2.323135e-49	3.553113e-47
MsaG012993	MsaG038885	0.801522	1.450496e-48	2.029770e-46
MsaG022889	MsaG038885	0.819725	1.747974e-52	3.816262e-50
MsaG020399	MsaG038885	0.813954	3.399680e-51	6.401496e-49
MsaG020128	MsaG038885	0.846950	2.966599e-59	1.450259e-56
MsaG019847	MsaG038885	0.804579	3.407536e-49	5.115764e-47
MsaG025092	MsaG038885	0.809207	3.618223e-50	6.061524e-48
MsaG024799	MsaG038885	0.812863	5.889262e-51	1.079014e-48
MsaG028857	MsaG038885	0.825693	7.247489e-54	1.858329e-51
MsaG026803	MsaG038885	0.822060	5.103887e-53	1.185519e-50
MsaG026407	MsaG038885	0.805181	2.553958e-49	3.888337e-47
MsaG028079	MsaG038885	0.852007	1.172036e-60	6.810838e-58
MsaG033602	MsaG038885	0.849833	4.769487e-60	2.570281e-57
MsaG031012	MsaG038885	0.805392	2.307584e-49	3.530451e-47
MsaG032525	MsaG038885	0.815643	1.441890e-51	2.833115e-49
MsaG031503	MsaG038885	0.813579	4.107787e-51	7.662288e-49
MsaG031242	MsaG038885	0.824695	1.244307e-53	3.104033e-51
MsaG032799	MsaG038885	0.846966	2.936694e-59	1.436461e-56
MsaG031246	MsaG038885	0.809652	2.907632e-50	4.923864e-48
MsaG031638	MsaG038885	0.802225	1.042134e-48	1.481824e-46
MsaG032252	MsaG038885	0.825566	7.762936e-54	1.983469e-51
MsaG031847	MsaG038885	0.826410	4.905088e-54	1.283024e-51
MsaG033778	MsaG038885	0.827392	2.863371e-54	7.698019e-52
MsaG033259	MsaG038885	0.820049	1.475272e-52	3.248934e-50
MsaG038885	MsaG036286	0.835916	2.318641e-56	7.982767e-54
MsaG038885	MsaG035600	0.801751	1.302454e-48	1.832132e-46
MsaG038885	MsaG037155	0.845371	7.944500e-59	3.685264e-56
MsaG038885	MsaG037531	0.849929	4.485421e-60	2.425132e-57
MsaG038885	MsaG037725	0.812059	8.808468e-51	1.581918e-48
MsaG038885	MsaG036685	0.841710	7.478698e-58	3.081305e-55
MsaG038885	MsaG035545	0.865459	1.163965e-64	1.119975e-61
MsaG038885	MsaG036758	0.858579	1.462285e-62	1.077478e-59
MsaG038885	MsaG037508	0.816418	9.696410e-52	1.943088e-49
MsaG038885	MsaG043366	0.801605	1.395349e-48	1.956285e-46
MsaG038885	MsaG041727	0.819234	2.259396e-52	4.869947e-50
MsaG038885	MsaG041442	0.841325	9.435446e-58	3.840304e-55
MsaG038885	MsaG044977	0.857390	3.284065e-62	2.315011e-59
MsaG038885	MsaG044531	0.831452	2.988072e-55	9.016305e-53
MsaG038885	MsaG042876	0.815124	1.878186e-51	3.641954e-49
MsaG038885	MsaG043822	0.813654	3.956012e-51	7.392934e-49
MsaG012723	MsaG038885	0.828522	1.535964e-54	4.262449e-52
MsaG014815	MsaG038885	0.834150	6.434778e-56	2.101190e-53
MsaG014848	MsaG038885	0.815338	1.684842e-51	3.284925e-49
MsaG015371	MsaG038885	0.803667	5.264624e-49	7.738537e-47
MsaG015493	MsaG038885	0.816308	1.026238e-51	2.050757e-49
MsaG015871	MsaG038885	0.851701	1.430012e-60	8.219533e-58
MsaG016209	MsaG038885	0.833835	7.706360e-56	2.493040e-53
MsaG016327	MsaG038885	0.889272	6.160103e-73	1.747888e-69
MsaG016471	MsaG038885	0.814972	2.029127e-51	3.919818e-49
MsaG016695	MsaG038885	0.849647	5.373311e-60	2.877635e-57
MsaG016772	MsaG038885	0.801423	1.519453e-48	2.121520e-46
MsaG016884	MsaG038885	0.802734	8.194317e-49	1.178806e-46
MsaG017009	MsaG038885	0.870238	3.453137e-66	4.041890e-63
MsaG017051	MsaG038885	0.827694	2.425464e-54	6.576117e-52
MsaG017644	MsaG038885	0.852999	6.129411e-61	3.688037e-58
MsaG017699	MsaG038885	0.851047	2.184321e-60	1.227420e-57
MsaG017827	MsaG038885	0.811004	1.489847e-50	2.607292e-48
MsaG017828	MsaG038885	0.837612	8.608587e-57	3.119920e-54
MsaG017954	MsaG038885	0.861095	2.572927e-63	2.085595e-60
MsaG017983	MsaG038885	0.854996	1.638941e-61	1.058651e-58
MsaG018025	MsaG038885	0.808729	4.573705e-50	7.575179e-48
MsaG018035	MsaG038885	0.815932	1.243917e-51	2.462073e-49
MsaG018054	MsaG038885	0.813657	3.949328e-51	7.381009e-49
MsaG018078	MsaG038885	0.829035	1.155818e-54	3.253874e-52
MsaG018116	MsaG038885	0.800965	1.883954e-48	2.603252e-46
MsaG018223	MsaG038885	0.820491	1.169397e-52	2.605575e-50
MsaG018286	MsaG038885	0.833214	1.099303e-55	3.492374e-53
MsaG018631	MsaG038885	0.802689	8.368239e-49	1.202629e-46
MsaG018701	MsaG038885	0.800326	2.539361e-48	3.458695e-46
MsaG019120	MsaG038885	0.850112	3.989423e-60	2.170184e-57
MsaG019171	MsaG038885	0.813066	5.319572e-51	9.796068e-49
MsaG019237	MsaG038885	0.830707	4.543736e-55	1.341774e-52
MsaG019527	MsaG038885	0.802109	1.100718e-48	1.560944e-46
MsaG019559	MsaG038885	0.828301	1.735334e-54	4.785745e-52
MsaG019597	MsaG038885	0.804803	3.061427e-49	4.620131e-47
MsaG019649	MsaG038885	0.853433	4.609583e-61	2.816291e-58
MsaG019672	MsaG038885	0.833176	1.123619e-55	3.565519e-53
MsaG019714	MsaG038885	0.811485	1.173078e-50	2.077311e-48
MsaG019720	MsaG038885	0.827517	2.674017e-54	7.213934e-52
MsaG019728	MsaG038885	0.812633	6.609319e-51	1.204013e-48
MsaG019770	MsaG038885	0.865328	1.278984e-64	1.224332e-61
MsaG019907	MsaG038885	0.823842	1.970324e-53	4.802366e-51
MsaG020021	MsaG038885	0.815014	1.986717e-51	3.841867e-49
MsaG020026	MsaG038885	0.800534	2.304140e-48	3.153196e-46
MsaG020240	MsaG038885	0.804863	2.975294e-49	4.496414e-47
MsaG020382	MsaG038885	0.831638	2.689725e-55	8.160944e-53
MsaG020430	MsaG038885	0.834312	5.860926e-56	1.923241e-53
MsaG020550	MsaG038885	0.868754	1.044480e-65	1.149078e-62
MsaG020591	MsaG038885	0.812733	6.288050e-51	1.148335e-48
MsaG020733	MsaG038885	0.846606	3.680031e-59	1.778365e-56
MsaG020992	MsaG038885	0.803648	5.310423e-49	7.802442e-47
MsaG021200	MsaG038885	0.807364	8.904116e-50	1.427062e-47
MsaG021222	MsaG038885	0.844490	1.370191e-58	6.173689e-56
MsaG021683	MsaG038885	0.822011	5.237171e-53	1.214905e-50
MsaG023188	MsaG038885	0.811553	1.133933e-50	2.011335e-48
MsaG023649	MsaG038885	0.823643	2.192030e-53	5.314364e-51
MsaG023711	MsaG038885	0.827474	2.738188e-54	7.377999e-52
MsaG023716	MsaG038885	0.821365	7.376532e-53	1.682007e-50
MsaG023718	MsaG038885	0.804124	4.234381e-49	6.290586e-47
MsaG023794	MsaG038885	0.844845	1.100529e-58	5.017549e-56
MsaG023834	MsaG038885	0.811178	1.366337e-50	2.401395e-48
MsaG023861	MsaG038885	0.824597	1.311790e-53	3.263667e-51
MsaG024134	MsaG038885	0.839882	2.242412e-57	8.721813e-55
MsaG024295	MsaG038885	0.825028	1.039529e-53	2.616995e-51
MsaG025143	MsaG038885	0.843295	2.852764e-58	1.236678e-55
MsaG025641	MsaG038885	0.802562	8.885962e-49	1.273362e-46
MsaG026607	MsaG038885	0.860146	4.975873e-63	3.890725e-60
MsaG026686	MsaG038885	0.842890	3.654376e-58	1.563646e-55
MsaG026786	MsaG038885	0.849462	6.049983e-60	3.219667e-57
MsaG027092	MsaG038885	0.812564	6.841825e-51	1.244282e-48
MsaG027198	MsaG038885	0.848062	1.472922e-59	7.474971e-57
MsaG027207	MsaG038885	0.847376	2.270292e-59	1.125830e-56
MsaG027210	MsaG038885	0.842389	4.955566e-58	2.086725e-55
MsaG027241	MsaG038885	0.826603	4.413695e-54	1.160690e-51
MsaG027376	MsaG038885	0.830083	6.446735e-55	1.870205e-52
MsaG027572	MsaG038885	0.810407	2.002663e-50	3.454210e-48
MsaG027738	MsaG038885	0.820957	9.150424e-53	2.064160e-50
MsaG027828	MsaG038885	0.819044	2.494304e-52	5.349590e-50
MsaG028119	MsaG038885	0.809391	3.305472e-50	5.562362e-48
MsaG028191	MsaG038885	0.806271	1.511241e-49	2.360484e-47
MsaG028193	MsaG038885	0.818307	3.659279e-52	7.698408e-50
MsaG028277	MsaG038885	0.911068	2.244888e-82	2.275107e-78
MsaG028531	MsaG038885	0.841423	8.894039e-58	3.631372e-55
MsaG028877	MsaG038885	0.801486	1.475443e-48	2.062964e-46
MsaG029053	MsaG038885	0.810346	2.063627e-50	3.554096e-48
MsaG029091	MsaG038885	0.844113	1.728440e-58	7.692657e-56
MsaG029213	MsaG038885	0.808832	4.349844e-50	7.222055e-48
MsaG029307	MsaG038885	0.816772	8.084837e-52	1.634970e-49
MsaG029546	MsaG038885	0.840175	1.882335e-57	7.388575e-55
MsaG029547	MsaG038885	0.802293	1.009254e-48	1.437343e-46
MsaG029579	MsaG038885	0.807058	1.032664e-49	1.643102e-47
MsaG029618	MsaG038885	0.857930	2.276050e-62	1.636985e-59
MsaG029953	MsaG038885	0.861510	1.924991e-63	1.585265e-60
MsaG029947	MsaG038885	0.826856	3.843124e-54	1.017813e-51
MsaG029928	MsaG038885	0.808169	6.013786e-50	9.826749e-48
MsaG030902	MsaG038885	0.809314	3.433222e-50	5.766286e-48
MsaG031248	MsaG038885	0.843555	2.434173e-58	1.064015e-55
MsaG032279	MsaG038885	0.811885	9.611745e-51	1.718875e-48
MsaG032616	MsaG038885	0.805015	2.765458e-49	4.194180e-47
MsaG032702	MsaG038885	0.813938	3.427105e-51	6.450524e-49
MsaG032848	MsaG038885	0.801745	1.306094e-48	1.837016e-46
MsaG032901	MsaG038885	0.887442	3.090924e-72	7.993805e-69
MsaG032915	MsaG038885	0.838968	3.863150e-57	1.460239e-54
MsaG033309	MsaG038885	0.842679	4.154413e-58	1.765688e-55
MsaG033670	MsaG038885	0.815951	1.232144e-51	2.439960e-49
MsaG034047	MsaG038885	0.808186	5.964468e-50	9.749965e-48
MsaG034217	MsaG038885	0.836434	1.715790e-56	6.000268e-54
MsaG034590	MsaG038885	0.802512	9.098398e-49	1.302292e-46
MsaG035156	MsaG038885	0.808512	5.087696e-50	8.382053e-48
MsaG035277	MsaG038885	0.823070	2.979046e-53	7.110833e-51
MsaG035657	MsaG038885	0.822683	3.663355e-53	8.652971e-51
MsaG038749	MsaG038885	0.839677	2.535371e-57	9.797429e-55
MsaG039468	MsaG038885	0.825508	8.014605e-54	2.044465e-51
MsaG039902	MsaG038885	0.836378	1.772618e-56	6.188552e-54
MsaG039981	MsaG038885	0.844790	1.138375e-58	5.180712e-56
MsaG040504	MsaG038885	0.814736	2.288539e-51	4.394452e-49
MsaG040577	MsaG038885	0.833770	7.997674e-56	2.582526e-53
MsaG041014	MsaG038885	0.809809	2.690803e-50	4.574061e-48
MsaG041229	MsaG038885	0.829794	7.574386e-55	2.179200e-52
MsaG041237	MsaG038885	0.862843	7.538853e-64	6.539155e-61
MsaG041721	MsaG038885	0.808644	4.767880e-50	7.880378e-48
MsaG041717	MsaG038885	0.807933	6.747713e-50	1.096384e-47
MsaG041754	MsaG038885	0.851917	1.243111e-60	7.200666e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038885	MtrunA17_Chr7g0251671	77.241	145	32	1	1	145	1	144	1.99e-80	235
MsaG038885	MtrunA17_Chr7g0251661	71.724	145	40	1	1	145	1	144	2.42e-74	219
MsaG038885	MtrunA17_Chr7g0251651	66.463	164	49	3	3	161	11	173	3.12e-72	216
MsaG038885	MtrunA17_Chr7g0252971	31.884	138	81	4	10	136	8	143	3.91e-19	82.8
MsaG038885	MtrunA17_Chr4g0042561	30.065	153	100	5	4	153	3	151	1.20e-18	80.5
MsaG038885	MtrunA17_Chr7g0214071	32.394	142	87	5	5	142	10	146	1.97e-18	79.7
MsaG038885	MtrunA17_Chr3g0124761	33.588	131	80	4	6	133	3	129	2.38e-18	79.7
MsaG038885	MtrunA17_Chr2g0309891	32.867	143	86	4	6	143	2	139	2.39e-18	80.5
MsaG038885	MtrunA17_Chr5g0417791	31.293	147	94	5	8	151	1	143	3.43e-18	79.0
MsaG038885	MtrunA17_Chr4g0047841	34.091	132	81	4	10	137	15	144	3.59e-18	80.1
MsaG038885	MtrunA17_Chr8g0384721	33.333	129	79	4	8	133	5	129	1.45e-17	77.8
MsaG038885	MtrunA17_Chr2g0326361	30.714	140	91	4	4	139	8	145	2.61e-17	77.4
MsaG038885	MtrunA17_Chr7g0263931	32.639	144	87	5	6	141	7	148	2.92e-17	77.4
MsaG038885	MtrunA17_Chr2g0318101	32.168	143	89	5	10	148	15	153	9.58e-17	76.3
MsaG038885	MtrunA17_Chr5g0442771	35.338	133	76	6	7	133	16	144	1.02e-16	75.9
MsaG038885	MtrunA17_Chr5g0417001	32.847	137	85	5	7	139	12	145	1.10e-16	76.3
MsaG038885	MtrunA17_Chr6g0481091	34.646	127	79	3	10	133	6	131	1.10e-16	74.7
MsaG038885	MtrunA17_Chr2g0311661	32.075	159	98	6	2	154	14	168	1.34e-16	75.1
MsaG038885	MtrunA17_Chr6g0453131	31.544	149	94	5	1	144	7	152	1.58e-16	75.9
MsaG038885	MtrunA17_Chr6g0461661	30.769	143	90	5	8	143	16	156	2.91e-16	75.1
MsaG038885	MtrunA17_Chr5g0433781	33.588	131	83	3	6	133	2	131	3.83e-16	75.1
MsaG038885	MtrunA17_Chr3g0109821	32.824	131	84	3	6	133	2	131	3.86e-16	75.1
MsaG038885	MtrunA17_Chr6g0453451	31.884	138	88	4	4	138	14	148	3.91e-16	74.3
MsaG038885	MtrunA17_Chr8g0359921	31.387	137	82	5	6	136	10	140	4.58e-16	73.9
MsaG038885	MtrunA17_Chr2g0311651	32.886	149	90	6	7	149	20	164	4.83e-16	73.9
MsaG038885	MtrunA17_Chr8g0361731	32.847	137	85	5	7	139	12	145	5.49e-16	74.3
MsaG038885	MtrunA17_Chr3g0130731	32.836	134	77	5	6	133	3	129	5.54e-16	73.6
MsaG038885	MtrunA17_Chr1g0147421	32.117	137	84	5	7	137	24	157	9.22e-16	73.6
MsaG038885	MtrunA17_Chr8g0385991	29.496	139	90	4	3	137	7	141	1.10e-15	71.6
MsaG038885	MtrunA17_Chr2g0316971	31.250	128	82	5	10	133	23	148	1.27e-15	73.2
MsaG038885	MtrunA17_Chr6g0484441	31.496	127	81	5	10	133	5	128	2.31e-15	72.0
MsaG038885	MtrunA17_Chr2g0318081	30.147	136	89	4	6	138	12	144	3.28e-15	72.0
MsaG038885	MtrunA17_Chr3g0091921	28.462	130	87	5	7	133	13	139	5.99e-15	70.9
MsaG038885	MtrunA17_Chr3g0139331	31.111	135	87	4	7	137	8	140	6.48e-15	70.9
MsaG038885	MtrunA17_Chr1g0197361	32.168	143	90	6	13	150	11	151	8.47e-15	71.2
MsaG038885	MtrunA17_Chr3g0144271	30.657	137	86	5	10	141	23	155	8.80e-15	70.9
MsaG038885	MtrunA17_Chr3g0128151	33.071	127	81	3	10	133	22	147	1.26e-14	70.5
MsaG038885	MtrunA17_Chr1g0183741	31.361	169	106	7	1	163	1	165	1.46e-14	69.3
MsaG038885	MtrunA17_Chr7g0253011	33.582	134	77	6	8	133	15	144	1.57e-14	70.1
MsaG038885	MtrunA17_Chr1g0200561	29.861	144	92	5	7	144	16	156	3.60e-14	68.9
MsaG038885	MtrunA17_Chr5g0428991	33.858	127	80	3	10	133	25	150	3.99e-14	69.3
MsaG038885	MtrunA17_Chr1g0201021	31.452	124	81	3	13	133	22	144	6.32e-14	68.6
MsaG038885	MtrunA17_Chr4g0060931	28.462	130	87	5	7	133	14	140	1.10e-13	67.4
MsaG038885	MtrunA17_Chr7g0217711	29.630	135	87	5	3	133	12	142	2.29e-13	64.7
MsaG038885	MtrunA17_Chr4g0018391	30.469	128	84	4	10	133	7	133	2.53e-13	66.6
MsaG038885	MtrunA17_Chr1g0197351	32.031	128	81	4	10	133	42	167	2.76e-13	66.6
MsaG038885	MtrunA17_Chr8g0345701	27.972	143	81	4	10	133	7	146	4.34e-13	63.9
MsaG038885	MtrunA17_Chr5g0405211	30.070	143	93	5	7	144	5	145	4.77e-13	65.9
MsaG038885	MtrunA17_Chr5g0398971	28.906	128	87	3	10	133	7	134	4.86e-13	65.9
MsaG038885	MtrunA17_Chr3g0131911	29.078	141	90	4	3	137	7	143	5.29e-13	64.7
MsaG038885	MtrunA17_Chr3g0092671	30.882	136	73	6	13	136	8	134	5.72e-13	65.9
MsaG038885	MtrunA17_Chr2g0312321	29.139	151	88	7	3	145	4	143	7.24e-13	65.1
MsaG038885	MtrunA17_Chr5g0400461	30.075	133	84	3	10	133	6	138	9.72e-13	64.7
MsaG038885	MtrunA17_Chr4g0076731	29.231	130	86	4	7	133	52	178	2.31e-12	63.9
MsaG038885	MtrunA17_Chr8g0345711	29.630	135	89	4	9	138	11	144	3.13e-12	61.6
MsaG038885	MtrunA17_Chr7g0261411	30.667	150	93	6	1	144	1	145	3.78e-12	62.8
MsaG038885	MtrunA17_Chr8g0372121	28.169	142	97	4	7	144	3	143	4.55e-12	62.8
MsaG038885	MtrunA17_Chr3g0128111	30.645	124	82	3	13	133	45	167	5.64e-12	62.0
MsaG038885	MtrunA17_Chr2g0309331	28.467	137	94	3	1	133	1	137	5.84e-12	62.4
MsaG038885	MtrunA17_Chr4g0056541	29.457	129	84	5	10	133	7	133	9.21e-12	62.0
MsaG038885	MtrunA17_Chr4g0054791	27.907	129	88	3	10	133	6	134	2.07e-11	60.8
MsaG038885	MtrunA17_Chr8g0345671	31.008	129	83	5	10	133	11	138	7.54e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG038885	AT5G13180.1	37.037	135	76	5	3	133	7	136	5.33e-20	84.0
MsaG038885	AT2G33480.2	33.582	134	80	4	8	138	13	140	3.57e-19	82.0
MsaG038885	AT2G33480.1	33.582	134	80	4	8	138	13	140	3.79e-19	82.0
MsaG038885	AT1G61110.1	34.646	127	78	4	10	133	16	140	4.07e-18	80.1
MsaG038885	AT1G77450.1	33.088	136	84	4	1	133	1	132	8.83e-18	78.2
MsaG038885	AT1G76420.1	33.594	128	79	4	10	133	22	147	1.01e-17	79.0
MsaG038885	AT5G39820.1	32.168	143	88	6	7	143	18	157	1.06e-17	79.0
MsaG038885	AT2G43000.1	35.766	137	79	6	7	139	16	147	1.29e-17	78.2
MsaG038885	AT1G65910.1	32.824	131	84	3	6	133	2	131	1.48e-17	79.3
MsaG038885	AT5G63790.1	32.824	131	81	4	6	133	46	172	1.65e-17	78.2
MsaG038885	AT3G10500.1	33.846	130	82	4	10	136	9	137	1.86e-17	79.0
MsaG038885	AT5G63790.2	32.824	131	81	4	6	133	56	182	1.97e-17	78.2
MsaG038885	AT5G08790.1	32.061	131	82	4	6	133	3	129	2.68e-17	77.4
MsaG038885	AT3G03200.1	33.803	142	88	4	6	143	2	141	3.44e-17	78.2
MsaG038885	AT1G69490.1	32.090	134	83	5	4	133	3	132	4.22e-17	76.6
MsaG038885	AT5G18270.1	33.071	127	80	4	10	133	21	145	5.58e-17	77.0
MsaG038885	AT3G04070.2	30.070	143	90	5	10	145	10	149	7.07e-17	76.6
MsaG038885	AT3G17730.1	34.615	130	83	2	6	133	2	131	7.38e-17	75.5
MsaG038885	AT3G04070.1	30.070	143	90	5	10	145	10	149	9.61e-17	76.6
MsaG038885	AT1G26870.1	33.333	132	79	6	7	133	14	141	1.45e-16	76.3
MsaG038885	AT5G04410.1	30.000	140	94	3	10	146	9	147	2.29e-16	75.9
MsaG038885	AT3G15170.1	31.298	131	84	5	7	133	17	145	2.30e-16	75.1
MsaG038885	AT2G24430.2	31.111	135	87	4	7	137	13	145	2.42e-16	75.1
MsaG038885	AT2G24430.1	31.111	135	87	4	7	137	13	145	2.42e-16	75.1
MsaG038885	AT5G18270.2	32.283	127	81	4	10	133	21	145	3.28e-16	74.7
MsaG038885	AT5G53950.1	32.812	128	80	5	10	133	17	142	3.91e-16	75.1
MsaG038885	AT3G04060.1	30.709	127	83	4	10	133	20	144	5.28e-16	74.3
MsaG038885	AT3G15500.1	32.836	134	84	4	6	136	10	140	6.09e-16	73.9
MsaG038885	AT5G17260.1	31.690	142	91	4	6	143	2	141	7.56e-16	74.3
MsaG038885	AT1G33060.2	33.858	127	80	4	10	133	24	149	9.71e-16	74.3
MsaG038885	AT1G33060.1	33.858	127	80	4	10	133	24	149	1.07e-15	73.9
MsaG038885	AT3G10490.1	30.935	139	90	4	2	136	19	155	1.09e-15	72.4
MsaG038885	AT3G15510.1	32.283	127	80	4	14	136	21	145	1.13e-15	73.6
MsaG038885	AT3G12910.1	33.121	157	84	6	8	157	20	162	1.18e-15	73.2
MsaG038885	AT1G52890.1	32.090	134	85	4	6	136	10	140	1.73e-15	72.8
MsaG038885	AT1G01720.1	32.576	132	81	5	6	133	2	129	1.87e-15	72.4
MsaG038885	AT5G07680.1	30.303	132	86	4	5	133	12	140	2.55e-15	72.4
MsaG038885	AT4G27410.2	30.597	134	87	4	6	136	10	140	3.09e-15	72.0
MsaG038885	AT5G07680.2	31.496	127	81	4	10	133	3	126	3.10e-15	72.0
MsaG038885	AT5G39610.1	32.283	127	80	5	10	133	20	143	4.11e-15	71.2
MsaG038885	AT4G35580.1	34.646	127	79	4	10	133	9	134	8.88e-15	71.2
MsaG038885	AT4G35580.3	34.646	127	79	4	10	133	9	134	8.98e-15	71.2
MsaG038885	AT4G35580.2	34.646	127	79	4	10	133	9	134	8.98e-15	71.2
MsaG038885	AT3G29035.1	30.070	143	89	5	10	144	24	163	9.11e-15	70.9
MsaG038885	AT3G10490.2	31.429	140	88	5	2	136	19	155	9.58e-15	71.2
MsaG038885	AT3G10480.2	30.216	139	91	4	2	136	19	155	1.26e-14	70.9
MsaG038885	AT5G61430.1	30.769	130	84	5	7	133	13	139	1.31e-14	70.5
MsaG038885	AT3G10480.1	30.216	139	91	4	2	136	19	155	1.35e-14	70.9
MsaG038885	AT3G18400.1	30.534	131	85	5	10	137	5	132	1.36e-14	70.1
MsaG038885	AT2G27300.1	33.333	138	85	7	1	135	7	140	1.37e-14	70.5
MsaG038885	AT3G44290.2	32.283	127	81	4	13	136	17	141	1.87e-14	68.9
MsaG038885	AT1G54330.1	34.307	137	74	4	6	133	2	131	1.93e-14	69.7
MsaG038885	AT4G17980.1	27.465	142	99	3	9	146	5	146	2.58e-14	68.9
MsaG038885	AT4G17980.2	27.465	142	99	3	9	146	5	146	5.14e-14	68.6
MsaG038885	AT1G34180.1	32.308	130	72	4	13	133	19	141	7.61e-14	68.6
MsaG038885	AT5G46590.1	28.906	128	88	2	9	133	5	132	7.74e-14	67.8
MsaG038885	AT3G44290.1	32.283	127	81	4	13	136	17	141	8.43e-14	68.2
MsaG038885	AT5G46590.2	28.906	128	88	2	9	133	5	132	9.10e-14	67.8
MsaG038885	AT4G01520.1	29.032	155	103	5	11	158	5	159	9.67e-14	67.8
MsaG038885	AT4G36160.2	28.859	149	99	5	1	144	5	151	1.64e-13	67.4
MsaG038885	AT3G12977.1	28.472	144	95	5	2	141	10	149	1.65e-13	67.0
MsaG038885	AT4G36160.1	28.859	149	99	5	1	144	1	147	1.79e-13	67.4
MsaG038885	AT4G36160.3	28.859	149	99	5	1	144	1	147	1.79e-13	67.4
MsaG038885	AT1G56010.2	29.655	145	94	5	2	142	11	151	1.90e-13	67.0
MsaG038885	AT5G62380.2	29.710	138	90	5	10	142	7	142	1.99e-13	67.0
MsaG038885	AT5G62380.1	29.710	138	90	5	10	142	7	142	1.99e-13	67.0
MsaG038885	AT1G79580.3	27.941	136	94	3	2	133	9	144	2.50e-13	67.0
MsaG038885	AT1G79580.5	27.941	136	94	3	2	133	9	144	2.50e-13	67.0
MsaG038885	AT1G79580.4	27.941	136	94	3	2	133	9	144	2.50e-13	67.0
MsaG038885	AT1G79580.2	27.941	136	94	3	2	133	9	144	2.50e-13	67.0
MsaG038885	AT1G79580.1	27.941	136	94	3	2	133	9	144	2.50e-13	67.0
MsaG038885	AT1G34190.1	30.769	130	74	4	13	133	19	141	3.05e-13	67.0
MsaG038885	AT1G71930.2	30.469	128	84	4	10	133	9	135	3.40e-13	66.2
MsaG038885	AT1G71930.1	30.469	128	84	4	10	133	9	135	3.40e-13	66.2
MsaG038885	AT1G34180.3	31.818	132	74	4	13	135	19	143	6.54e-13	65.9
MsaG038885	AT4G01540.1	27.922	154	104	5	12	158	6	159	8.08e-13	65.9
MsaG038885	AT4G01540.3	27.922	154	104	5	12	158	6	159	8.25e-13	65.5
MsaG038885	AT4G01540.2	27.922	154	104	5	12	158	6	159	8.60e-13	65.5
MsaG038885	AT5G24590.2	31.496	127	84	2	10	133	13	139	9.91e-13	65.5
MsaG038885	AT4G01540.4	27.922	154	104	5	12	158	6	159	1.17e-12	65.1
MsaG038885	AT5G14000.2	27.778	144	82	6	3	135	8	140	1.64e-12	62.4
MsaG038885	AT5G04395.1	28.743	167	98	7	1	150	19	181	1.85e-12	62.8
MsaG038885	AT5G66300.1	29.323	133	89	4	10	138	12	143	1.95e-12	63.9
MsaG038885	AT2G02450.1	28.682	129	86	4	8	133	50	175	7.05e-12	62.8
MsaG038885	AT2G18060.3	29.286	140	92	5	10	144	9	146	7.78e-12	62.8
MsaG038885	AT2G18060.1	29.286	140	92	5	10	144	9	146	7.78e-12	62.8
MsaG038885	AT5G14000.1	27.778	144	82	6	3	135	8	140	7.92e-12	61.2
MsaG038885	AT4G28530.1	28.758	153	87	4	1	133	1	151	8.08e-12	62.8
MsaG038885	AT2G02450.2	28.682	129	86	4	8	133	50	175	9.15e-12	62.4
MsaG038885	AT5G50820.1	29.286	140	89	3	2	138	9	141	9.54e-12	60.8
MsaG038885	AT3G44350.1	29.630	135	89	3	10	138	5	139	3.41e-11	58.9
MsaG038885	AT5G09330.5	32.143	140	91	4	10	146	6	144	3.53e-11	60.8
MsaG038885	AT5G09330.2	32.143	140	91	4	10	146	6	144	3.53e-11	60.8
MsaG038885	AT5G09330.4	32.143	140	91	4	10	146	6	144	3.53e-11	60.8
MsaG038885	AT5G09330.3	32.143	140	91	4	10	146	6	144	3.53e-11	60.8
MsaG038885	AT5G09330.1	32.143	140	91	4	10	146	6	144	3.53e-11	60.8
MsaG038885	AT1G32870.1	31.200	125	84	2	10	133	10	133	4.75e-11	60.5
MsaG038885	AT1G32870.3	31.200	125	84	2	10	133	46	169	5.30e-11	60.5
MsaG038885	AT1G32870.2	31.200	125	84	2	10	133	10	133	5.62e-11	60.5

Find 45 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAAGAACACATTTGTTTAC+TGG	0.271032	7:-81969770	MsaT038885.1:CDS
AGTACTATTTCTTTGATATC+AGG	0.279804	7:-81969899	MsaT038885.1:CDS
AGGTGCCTATCGGATATTTA+AGG	0.283056	7:-81969454	MsaT038885.1:CDS
CTTTCACACAATCTATTGAT+TGG	0.327245	7:-81969795	MsaT038885.1:CDS
GAACCGTAGATTCGACAATA+TGG	0.390872	7:-81969877	MsaT038885.1:CDS
TTTCACACAATCTATTGATT+GGG	0.415597	7:-81969794	MsaT038885.1:CDS
ATTGTATTCATTACCCTAGC+TGG	0.431951	7:+81969672	None:intergenic
ACACATTTGTTTACTGGATA+GGG	0.438722	7:-81969764	MsaT038885.1:CDS
GGATCAAACTTGTATCCAAC+AGG	0.462546	7:+81970417	None:intergenic
GCTGAGCTTCTTCTACCTGT+TGG	0.469612	7:-81970432	MsaT038885.1:CDS
AACACATTTGTTTACTGGAT+AGG	0.480417	7:-81969765	MsaT038885.1:CDS
AAACCTCTTGGCAGCCTCCA+TGG	0.486538	7:+81970297	None:intergenic
GAAGAGCTGGAGATGGTGAA+TGG	0.497231	7:-81969848	MsaT038885.1:CDS
CATCCATATTGTCGAATCTA+CGG	0.499210	7:+81969874	None:intergenic
ATGATCCATGGAGAGGGAGG+AGG	0.506432	7:+81969402	None:intergenic
CAAACGAAACTTATGATCCA+TGG	0.513882	7:+81969390	None:intergenic
TCGAATTCAAACAAGTGAGT+TGG	0.514689	7:+81970336	None:intergenic
ATCGGATATTTAAGGTATGA+AGG	0.524239	7:-81969446	MsaT038885.1:CDS
CTTGTTGAGTACTACCTGAC+GGG	0.535841	7:-81970381	MsaT038885.1:CDS
AATATGGATGCAAGAAGAGC+TGG	0.538144	7:-81969861	MsaT038885.1:CDS
AGGTGGCAAAACTGAGAAGA+AGG	0.540768	7:-81969426	MsaT038885.1:CDS
TTTGTTTACTGGATAGGGCA+AGG	0.546149	7:-81969759	MsaT038885.1:CDS
GTGAATGGAGAATAGTTGAA+TGG	0.546179	7:-81969833	MsaT038885.1:CDS
GTACAATTCATCATCCAGCT+AGG	0.552549	7:-81969686	MsaT038885.1:CDS
AAGGCCCTCCTCCCTCTCCA+TGG	0.555355	7:-81969407	MsaT038885.1:CDS
TCAACAAGCTCGTGATCAGT+TGG	0.555838	7:+81970396	None:intergenic
TCAAACAAGTGAGTTGGAAG+AGG	0.558737	7:+81970342	None:intergenic
GAGAATAGTTGAATGGAATG+AGG	0.563671	7:-81969826	MsaT038885.1:CDS
ATGTGTTTCAAACTGAGCCA+TGG	0.569635	7:-81970314	MsaT038885.1:CDS
TACAATTCATCATCCAGCTA+GGG	0.576583	7:-81969685	MsaT038885.1:intron
AGACAGCTGTAGGTGCCTAT+CGG	0.582547	7:-81969464	MsaT038885.1:intron
CTTATGATCCATGGAGAGGG+AGG	0.583949	7:+81969399	None:intergenic
TGATCCATGGAGAGGGAGGA+GGG	0.600410	7:+81969403	None:intergenic
GCTTGTTGAGTACTACCTGA+CGG	0.620029	7:-81970382	MsaT038885.1:CDS
AAACTTATGATCCATGGAGA+GGG	0.624096	7:+81969396	None:intergenic
GATGCAAGAAGAGCTGGAGA+TGG	0.639988	7:-81969855	MsaT038885.1:CDS
TCATACCTTAAATATCCGAT+AGG	0.640099	7:+81969449	None:intergenic
ACAAGTGAGTTGGAAGAGGT+AGG	0.647632	7:+81970346	None:intergenic
GAAACTTATGATCCATGGAG+AGG	0.651589	7:+81969395	None:intergenic
ATCAAGCTCTGATGACACAA+TGG	0.656016	7:-81969734	MsaT038885.1:CDS
GAGCCATGGAGGCTGCCAAG+AGG	0.670912	7:-81970300	MsaT038885.1:intron
TTGTTGAGTACTACCTGACG+GGG	0.672691	7:-81970380	MsaT038885.1:CDS
AAGCTCTGATGACACAATGG+TGG	0.675163	7:-81969731	MsaT038885.1:CDS
GGATATTTAAGGTATGAAGG+TGG	0.706296	7:-81969443	MsaT038885.1:CDS
TGTTTCAAACTGAGCCATGG+AGG	0.716472	7:-81970311	MsaT038885.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	81969400	81970469	81969400	ID=MsaG038885
Chr7	mRNA	81969400	81970469	81969400	ID=MsaT038885.1;Parent=MsaG038885
Chr7	exon	81969400	81969474	81969400	ID=MsaT038885.1.exon3;Parent=MsaT038885.1
Chr7	CDS	81969400	81969474	81969400	ID=cds.MsaT038885.1;Parent=MsaT038885.1
Chr7	exon	81969686	81969948	81969686	ID=MsaT038885.1.exon2;Parent=MsaT038885.1
Chr7	CDS	81969686	81969948	81969686	ID=cds.MsaT038885.1;Parent=MsaT038885.1
Chr7	exon	81970301	81970469	81970301	ID=MsaT038885.1.exon1;Parent=MsaT038885.1
Chr7	CDS	81970301	81970469	81970301	ID=cds.MsaT038885.1;Parent=MsaT038885.1

Gene Sequence

>MsaT038885.1

ATGGCTGTAGCTAATGCTGAGCTTCTTCTACCTGTTGGATACAAGTTTGATCCAACTGATCACGAGCTTGTTGAGTACTACCTGACGGGGAAAATTCTCAACCTACCTCTTCCAACTCACTTGTTTGAATTCGATGTGTTTCAAACTGAGCCATGGAGGCTGCCAAGAGATGATAGGTTTTCTTTGGAGCATAGGAAGTACTATTTCTTTGATATCAGGAACCGTAGATTCGACAATATGGATGCAAGAAGAGCTGGAGATGGTGAATGGAGAATAGTTGAATGGAATGAGGATTTTGCTCTTTCACACAATCTATTGATTGGGAGAAAGAACACATTTGTTTACTGGATAGGGCAAGGAAATCAAGCTCTGATGACACAATGGTGGATGCACGAATTCTTCATCATCAGTACAATTCATCATCCAGCTAGGGTGCCTATCGGATATTTAAGGTATGAAGGTGGCAAAACTGAGAAGAAGGCCCTCCTCCCTCTCCATGGATCATAA

Protein sequence

>MsaT038885.1

MAVANAELLLPVGYKFDPTDHELVEYYLTGKILNLPLPTHLFEFDVFQTEPWRLPRDDRFSLEHRKYYFFDIRNRRFDNMDARRAGDGEWRIVEWNEDFALSHNLLIGRKNTFVYWIGQGNQALMTQWWMHEFFIISTIHHPARVPIGYLRYEGGKTEKKALLPLHGS*