Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038911 | XP_003624489.2 | 97.521 | 484 | 3 | 5 | 1 | 484 | 1 | 475 | 0.0 | 949 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038911 | sp|Q9LSE2|ICE1_ARATH | 55.102 | 392 | 138 | 11 | 119 | 483 | 113 | 493 | 7.85e-116 | 352 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038911 | tr|G7KX83|G7KX83_MEDTR | 97.521 | 484 | 3 | 5 | 1 | 484 | 1 | 475 | 0.0 | 949 |
Gene ID | Type | Classification |
---|---|---|
MsaG038911 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000213 | MsaG038911 | 0.805514 | 2.176198e-49 | 3.338814e-47 |
MsaG000151 | MsaG038911 | 0.804369 | 3.767761e-49 | 5.629202e-47 |
MsaG000344 | MsaG038911 | 0.837005 | 1.229125e-56 | 4.372654e-54 |
MsaG000378 | MsaG038911 | 0.803150 | 6.729831e-49 | 9.774633e-47 |
MsaG001037 | MsaG038911 | 0.849066 | 7.789315e-60 | 4.089363e-57 |
MsaG001038 | MsaG038911 | 0.835050 | 3.829586e-56 | 1.284726e-53 |
MsaG002062 | MsaG038911 | 0.818869 | 2.732514e-52 | 5.833436e-50 |
MsaG002146 | MsaG038911 | 0.839781 | 2.382915e-57 | 9.238577e-55 |
MsaG002646 | MsaG038911 | 0.806196 | 1.566998e-49 | 2.443193e-47 |
MsaG002727 | MsaG038911 | 0.807595 | 7.955315e-50 | 1.282054e-47 |
MsaG003070 | MsaG038911 | 0.817416 | 5.804742e-52 | 1.193518e-49 |
MsaG003373 | MsaG038911 | 0.804498 | 3.542123e-49 | 5.307874e-47 |
MsaG003436 | MsaG038911 | 0.815764 | 1.355805e-51 | 2.671987e-49 |
MsaG003568 | MsaG038911 | 0.815053 | 1.947304e-51 | 3.769308e-49 |
MsaG003658 | MsaG038911 | 0.807739 | 7.419729e-50 | 1.199900e-47 |
MsaG003688 | MsaG038911 | 0.813710 | 3.845337e-51 | 7.196269e-49 |
MsaG003778 | MsaG038911 | 0.808417 | 5.329743e-50 | 8.760702e-48 |
MsaG003891 | MsaG038911 | 0.805078 | 2.683668e-49 | 4.075946e-47 |
MsaG003908 | MsaG038911 | 0.820255 | 1.323906e-52 | 2.931673e-50 |
MsaG003914 | MsaG038911 | 0.829023 | 1.163482e-54 | 3.274407e-52 |
MsaG003975 | MsaG038911 | 0.803577 | 5.494517e-49 | 8.059557e-47 |
MsaG004045 | MsaG038911 | 0.808594 | 4.887850e-50 | 8.068745e-48 |
MsaG004303 | MsaG038911 | 0.815678 | 1.416039e-51 | 2.784797e-49 |
MsaG004430 | MsaG038911 | 0.806136 | 1.613172e-49 | 2.511525e-47 |
MsaG004476 | MsaG038911 | 0.811239 | 1.325378e-50 | 2.332947e-48 |
MsaG004654 | MsaG038911 | 0.851001 | 2.250775e-60 | 1.262661e-57 |
MsaG005078 | MsaG038911 | 0.812491 | 7.098746e-51 | 1.288637e-48 |
MsaG005420 | MsaG038911 | 0.805099 | 2.656179e-49 | 4.036198e-47 |
MsaG005728 | MsaG038911 | 0.814168 | 3.051422e-51 | 5.776431e-49 |
MsaG005730 | MsaG038911 | 0.805065 | 2.700797e-49 | 4.100752e-47 |
MsaG005843 | MsaG038911 | 0.830778 | 4.366608e-55 | 1.292154e-52 |
MsaG005995 | MsaG038911 | 0.820707 | 1.043609e-52 | 2.338490e-50 |
MsaG005937 | MsaG038911 | 0.805650 | 2.039076e-49 | 3.138460e-47 |
MsaG006143 | MsaG038911 | 0.818322 | 3.631822e-52 | 7.643600e-50 |
MsaG006200 | MsaG038911 | 0.801592 | 1.403536e-48 | 1.967175e-46 |
MsaG006263 | MsaG038911 | 0.837510 | 9.140449e-57 | 3.302523e-54 |
MsaG006550 | MsaG038911 | 0.832218 | 1.937444e-55 | 5.978017e-53 |
MsaG006669 | MsaG038911 | 0.808793 | 4.433687e-50 | 7.354186e-48 |
MsaG007030 | MsaG038911 | 0.801466 | 1.489551e-48 | 2.081756e-46 |
MsaG007500 | MsaG038911 | 0.805197 | 2.535153e-49 | 3.861075e-47 |
MsaG007584 | MsaG038911 | 0.817070 | 6.936127e-52 | 1.413496e-49 |
MsaG007742 | MsaG038911 | 0.807137 | 9.938421e-50 | 1.584284e-47 |
MsaG007891 | MsaG038911 | 0.849151 | 7.377964e-60 | 3.884675e-57 |
MsaG007949 | MsaG038911 | 0.819486 | 1.980796e-52 | 4.297742e-50 |
MsaG008052 | MsaG038911 | 0.823970 | 1.838834e-53 | 4.497600e-51 |
MsaG008155 | MsaG038911 | 0.814341 | 2.794869e-51 | 5.313948e-49 |
MsaG008603 | MsaG038911 | 0.803456 | 5.819472e-49 | 8.512378e-47 |
MsaG009117 | MsaG038911 | 0.826033 | 6.022864e-54 | 1.559047e-51 |
MsaG009738 | MsaG038911 | 0.839084 | 3.606343e-57 | 1.368102e-54 |
MsaG009860 | MsaG038911 | 0.810683 | 1.746687e-50 | 3.032868e-48 |
MsaG010644 | MsaG038911 | 0.835653 | 2.702156e-56 | 9.229773e-54 |
MsaG010831 | MsaG038911 | 0.825149 | 9.736800e-54 | 2.459287e-51 |
MsaG010890 | MsaG038911 | 0.807501 | 8.328074e-50 | 1.339143e-47 |
MsaG010955 | MsaG038911 | 0.851587 | 1.540180e-60 | 8.816737e-58 |
MsaG011134 | MsaG038911 | 0.804903 | 2.917645e-49 | 4.413451e-47 |
MsaG011239 | MsaG038911 | 0.800837 | 1.999877e-48 | 2.755541e-46 |
MsaG011395 | MsaG038911 | 0.801154 | 1.724303e-48 | 2.392853e-46 |
MsaG011881 | MsaG038911 | 0.800649 | 2.183820e-48 | 2.996349e-46 |
MsaG011942 | MsaG038911 | 0.813397 | 4.502967e-51 | 8.361137e-49 |
MsaG012046 | MsaG038911 | 0.809270 | 3.508531e-50 | 5.886656e-48 |
MsaG012101 | MsaG038911 | 0.827484 | 2.722199e-54 | 7.337042e-52 |
MsaG012208 | MsaG038911 | 0.829104 | 1.112076e-54 | 3.136883e-52 |
MsaG012237 | MsaG038911 | 0.820573 | 1.119914e-52 | 2.500713e-50 |
MsaG012501 | MsaG038911 | 0.826404 | 4.921297e-54 | 1.287046e-51 |
MsaG012529 | MsaG038911 | 0.852069 | 1.125649e-60 | 6.555079e-58 |
MsaG012639 | MsaG038911 | 0.813260 | 4.824705e-51 | 8.927655e-49 |
MsaG013264 | MsaG038911 | 0.812328 | 7.701291e-51 | 1.392336e-48 |
MsaG013884 | MsaG038911 | 0.807511 | 8.289340e-50 | 1.333233e-47 |
MsaG014290 | MsaG038911 | 0.800644 | 2.189255e-48 | 3.003411e-46 |
MsaG015331 | MsaG038911 | 0.803772 | 5.007778e-49 | 7.378933e-47 |
MsaG016433 | MsaG038911 | 0.837929 | 7.141142e-57 | 2.613440e-54 |
MsaG016512 | MsaG038911 | 0.832558 | 1.597108e-55 | 4.976931e-53 |
MsaG016529 | MsaG038911 | 0.826848 | 3.860553e-54 | 1.022194e-51 |
MsaG016591 | MsaG038911 | 0.803342 | 6.141546e-49 | 8.959986e-47 |
MsaG017003 | MsaG038911 | 0.818451 | 3.395836e-52 | 7.170977e-50 |
MsaG017023 | MsaG038911 | 0.803622 | 5.377136e-49 | 7.895651e-47 |
MsaG017119 | MsaG038911 | 0.813203 | 4.965742e-51 | 9.175660e-49 |
MsaG017271 | MsaG038911 | 0.835050 | 3.829586e-56 | 1.284726e-53 |
MsaG017348 | MsaG038911 | 0.806552 | 1.319840e-49 | 2.075179e-47 |
MsaG017463 | MsaG038911 | 0.800747 | 2.085991e-48 | 2.868399e-46 |
MsaG017504 | MsaG038911 | 0.801630 | 1.379165e-48 | 1.934680e-46 |
MsaG017551 | MsaG038911 | 0.801278 | 1.626568e-48 | 2.263556e-46 |
MsaG017683 | MsaG038911 | 0.804762 | 3.121637e-49 | 4.706535e-47 |
MsaG017796 | MsaG038911 | 0.861753 | 1.623727e-63 | 1.349774e-60 |
MsaG017839 | MsaG038911 | 0.811983 | 9.149664e-51 | 1.640179e-48 |
MsaG017846 | MsaG038911 | 0.841934 | 6.529544e-58 | 2.709763e-55 |
MsaG017870 | MsaG038911 | 0.806259 | 1.520036e-49 | 2.373531e-47 |
MsaG018005 | MsaG038911 | 0.800753 | 2.080489e-48 | 2.861212e-46 |
MsaG018082 | MsaG038911 | 0.852031 | 1.154052e-60 | 6.711652e-58 |
MsaG018466 | MsaG038911 | 0.817724 | 4.950689e-52 | 1.025969e-49 |
MsaG018425 | MsaG038911 | 0.811154 | 1.383183e-50 | 2.429527e-48 |
MsaG018552 | MsaG038911 | 0.801630 | 1.378702e-48 | 1.934069e-46 |
MsaG018861 | MsaG038911 | 0.801092 | 1.774798e-48 | 2.459460e-46 |
MsaG019188 | MsaG038911 | 0.813512 | 4.250098e-51 | 7.914391e-49 |
MsaG020149 | MsaG038911 | 0.810123 | 2.304743e-50 | 3.947629e-48 |
MsaG020255 | MsaG038911 | 0.809986 | 2.466244e-50 | 4.210164e-48 |
MsaG020287 | MsaG038911 | 0.801463 | 1.491373e-48 | 2.084185e-46 |
MsaG020418 | MsaG038911 | 0.810833 | 1.621483e-50 | 2.825912e-48 |
MsaG020732 | MsaG038911 | 0.813904 | 3.487680e-51 | 6.558867e-49 |
MsaG020716 | MsaG038911 | 0.821105 | 8.462287e-53 | 1.916349e-50 |
MsaG020798 | MsaG038911 | 0.815542 | 1.518491e-51 | 2.975826e-49 |
MsaG021401 | MsaG038911 | 0.807714 | 7.509602e-50 | 1.213730e-47 |
MsaG022007 | MsaG038911 | 0.839883 | 2.241706e-57 | 8.719290e-55 |
MsaG022362 | MsaG038911 | 0.830717 | 4.519194e-55 | 1.334919e-52 |
MsaG022627 | MsaG038911 | 0.826946 | 3.657370e-54 | 9.710557e-52 |
MsaG023264 | MsaG038911 | 0.807107 | 1.008761e-49 | 1.606913e-47 |
MsaG023502 | MsaG038911 | 0.804578 | 3.409455e-49 | 5.118513e-47 |
MsaG023537 | MsaG038911 | 0.810845 | 1.611875e-50 | 2.809970e-48 |
MsaG023645 | MsaG038911 | 0.802419 | 9.508109e-49 | 1.358055e-46 |
MsaG023676 | MsaG038911 | 0.812569 | 6.825120e-51 | 1.241395e-48 |
MsaG023813 | MsaG038911 | 0.807996 | 6.544140e-50 | 1.064890e-47 |
MsaG024120 | MsaG038911 | 0.816776 | 8.071103e-52 | 1.632332e-49 |
MsaG024871 | MsaG038911 | 0.801194 | 1.692090e-48 | 2.350286e-46 |
MsaG025367 | MsaG038911 | 0.800836 | 2.001216e-48 | 2.757309e-46 |
MsaG025882 | MsaG038911 | 0.824544 | 1.350140e-53 | 3.354313e-51 |
MsaG026689 | MsaG038911 | 0.824237 | 1.593248e-53 | 3.925157e-51 |
MsaG026820 | MsaG038911 | 0.814328 | 2.814283e-51 | 5.348897e-49 |
MsaG026931 | MsaG038911 | 0.801650 | 1.366040e-48 | 1.917157e-46 |
MsaG027248 | MsaG038911 | 0.844867 | 1.085491e-58 | 4.952763e-56 |
MsaG027482 | MsaG038911 | 0.801720 | 1.321917e-48 | 1.858178e-46 |
MsaG027557 | MsaG038911 | 0.805126 | 2.622413e-49 | 3.987442e-47 |
MsaG027725 | MsaG038911 | 0.811318 | 1.274902e-50 | 2.248410e-48 |
MsaG027757 | MsaG038911 | 0.806377 | 1.435938e-49 | 2.248448e-47 |
MsaG028107 | MsaG038911 | 0.838246 | 5.925733e-57 | 2.189810e-54 |
MsaG028515 | MsaG038911 | 0.800300 | 2.570854e-48 | 3.499451e-46 |
MsaG028480 | MsaG038911 | 0.808732 | 4.567892e-50 | 7.566024e-48 |
MsaG028649 | MsaG038911 | 0.800151 | 2.754709e-48 | 3.737238e-46 |
MsaG028680 | MsaG038911 | 0.805239 | 2.483658e-49 | 3.786392e-47 |
MsaG028802 | MsaG038911 | 0.837581 | 8.765228e-57 | 3.173653e-54 |
MsaG029580 | MsaG038911 | 0.851873 | 1.279094e-60 | 7.397232e-58 |
MsaG029742 | MsaG038911 | 0.804990 | 2.799510e-49 | 4.243215e-47 |
MsaG030445 | MsaG038911 | 0.810016 | 2.429632e-50 | 4.150689e-48 |
MsaG030595 | MsaG038911 | 0.812814 | 6.037953e-51 | 1.104882e-48 |
MsaG031007 | MsaG038911 | 0.805195 | 2.537125e-49 | 3.863960e-47 |
MsaG031640 | MsaG038911 | 0.817898 | 4.524282e-52 | 9.418270e-50 |
MsaG031781 | MsaG038911 | 0.802030 | 1.142345e-48 | 1.617092e-46 |
MsaG032000 | MsaG038911 | 0.808062 | 6.336670e-50 | 1.032756e-47 |
MsaG032180 | MsaG038911 | 0.821166 | 8.195355e-53 | 1.858985e-50 |
MsaG032399 | MsaG038911 | 0.805470 | 2.223665e-49 | 3.408112e-47 |
MsaG032764 | MsaG038911 | 0.805310 | 2.400632e-49 | 3.665764e-47 |
MsaG033640 | MsaG038911 | 0.814238 | 2.945700e-51 | 5.586177e-49 |
MsaG034225 | MsaG038911 | 0.800796 | 2.038711e-48 | 2.806538e-46 |
MsaG034364 | MsaG038911 | 0.811561 | 1.129449e-50 | 2.003767e-48 |
MsaG035163 | MsaG038911 | 0.806723 | 1.214599e-49 | 1.917448e-47 |
MsaG035390 | MsaG038911 | 0.818459 | 3.382201e-52 | 7.143562e-50 |
MsaG035391 | MsaG038911 | 0.828255 | 1.780305e-54 | 4.903263e-52 |
MsaG035835 | MsaG038911 | 0.812703 | 6.382504e-51 | 1.164745e-48 |
MsaG035933 | MsaG038911 | 0.811245 | 1.321993e-50 | 2.327260e-48 |
MsaG036055 | MsaG038911 | 0.817604 | 5.266721e-52 | 1.088112e-49 |
MsaG036061 | MsaG038911 | 0.826813 | 3.934255e-54 | 1.040676e-51 |
MsaG036122 | MsaG038911 | 0.822609 | 3.811122e-53 | 8.984157e-51 |
MsaG036204 | MsaG038911 | 0.812807 | 6.056452e-51 | 1.108105e-48 |
MsaG036455 | MsaG038911 | 0.803012 | 7.183188e-49 | 1.040014e-46 |
MsaG036549 | MsaG038911 | 0.810525 | 1.889302e-50 | 3.267976e-48 |
MsaG036935 | MsaG038911 | 0.815217 | 1.792004e-51 | 3.483178e-49 |
MsaG038682 | MsaG038911 | 0.830755 | 4.422818e-55 | 1.307929e-52 |
MsaG038911 | MsaG040027 | 0.824762 | 1.200384e-53 | 2.999914e-51 |
MsaG038911 | MsaG040028 | 0.812554 | 6.877518e-51 | 1.250450e-48 |
MsaG038911 | MsaG040207 | 0.818647 | 3.066833e-52 | 6.509395e-50 |
MsaG038911 | MsaG040261 | 0.815840 | 1.303969e-51 | 2.574880e-49 |
MsaG038911 | MsaG040573 | 0.811066 | 1.444425e-50 | 2.531730e-48 |
MsaG038911 | MsaG040720 | 0.811519 | 1.153504e-50 | 2.044299e-48 |
MsaG038911 | MsaG041183 | 0.826540 | 4.566868e-54 | 1.198883e-51 |
MsaG038911 | MsaG041985 | 0.808875 | 4.258111e-50 | 7.077190e-48 |
MsaG038911 | MsaG041972 | 0.823743 | 2.078131e-53 | 5.051684e-51 |
MsaG038911 | MsaG042456 | 0.800523 | 2.315861e-48 | 3.168406e-46 |
MsaG038911 | MsaG042509 | 0.813587 | 4.092690e-51 | 7.635603e-49 |
MsaG038911 | MsaG042686 | 0.808286 | 5.680128e-50 | 9.307562e-48 |
MsaG038911 | MsaG043850 | 0.805901 | 1.807144e-49 | 2.797874e-47 |
MsaG038911 | MsaG043981 | 0.805128 | 2.620450e-49 | 3.984587e-47 |
MsaG038911 | MsaG044743 | 0.818464 | 3.373700e-52 | 7.126538e-50 |
MsaG038911 | MsaG044874 | 0.819573 | 1.892525e-52 | 4.115404e-50 |
MsaG038911 | MsaG044940 | 0.805835 | 1.865542e-49 | 2.883837e-47 |
MsaG038911 | MsaG045505 | 0.860268 | 4.570361e-63 | 3.590728e-60 |
MsaG038911 | MsaG045510 | 0.830633 | 4.735475e-55 | 1.395448e-52 |
MsaG038911 | MsaG045953 | 0.803750 | 5.060278e-49 | 7.452591e-47 |
MsaG038911 | MsaG046558 | 0.823308 | 2.622686e-53 | 6.300624e-51 |
MsaG038911 | MsaG046611 | 0.803726 | 5.117379e-49 | 7.532594e-47 |
MsaG038911 | MsaG046643 | 0.800847 | 1.990248e-48 | 2.742886e-46 |
MsaG038911 | MsaG046981 | 0.806181 | 1.578324e-49 | 2.459926e-47 |
MsaG038911 | MsaG047181 | 0.816674 | 8.503261e-52 | 1.715178e-49 |
MsaG038911 | MsaG002430 | 0.810572 | 1.845872e-50 | 3.196483e-48 |
MsaG038911 | MsaG000283 | 0.830619 | 4.774289e-55 | 1.406299e-52 |
MsaG038911 | MsaG001341 | 0.801801 | 1.272096e-48 | 1.791501e-46 |
MsaG038911 | MsaG009468 | 0.802893 | 7.597836e-49 | 1.097029e-46 |
MsaG038911 | MsaG007367 | 0.831016 | 3.819346e-55 | 1.137982e-52 |
MsaG038911 | MsaG007379 | 0.807232 | 9.490717e-50 | 1.516289e-47 |
MsaG038911 | MsaG008804 | 0.807504 | 8.317954e-50 | 1.337599e-47 |
MsaG038911 | MsaG009124 | 0.847268 | 2.430382e-59 | 1.200872e-56 |
MsaG038911 | MsaG010582 | 0.802852 | 7.749552e-49 | 1.117835e-46 |
MsaG038911 | MsaG011637 | 0.801381 | 1.549915e-48 | 2.161987e-46 |
MsaG038911 | MsaG013069 | 0.814390 | 2.726660e-51 | 5.190644e-49 |
MsaG038911 | MsaG012061 | 0.828182 | 1.853329e-54 | 5.094205e-52 |
MsaG038911 | MsaG013316 | 0.813047 | 5.369537e-51 | 9.883427e-49 |
MsaG038911 | MsaG021762 | 0.806323 | 1.474404e-49 | 2.305696e-47 |
MsaG038911 | MsaG027436 | 0.844939 | 1.038443e-58 | 4.749732e-56 |
MsaG038911 | MsaG027840 | 0.849928 | 4.489801e-60 | 2.427397e-57 |
MsaG038911 | MsaG027599 | 0.816043 | 1.175548e-51 | 2.333252e-49 |
MsaG038911 | MsaG033973 | 0.813060 | 5.334909e-51 | 9.822949e-49 |
MsaG038911 | MsaG032991 | 0.844011 | 1.840019e-58 | 8.161022e-56 |
MsaG038911 | MsaG031602 | 0.820642 | 1.080149e-52 | 2.416286e-50 |
MsaG038911 | MsaG030025 | 0.821564 | 6.637893e-53 | 1.521627e-50 |
MsaG038911 | MsaG033035 | 0.810195 | 2.223964e-50 | 3.815923e-48 |
MsaG038911 | MsaG034519 | 0.805006 | 2.777094e-49 | 4.210952e-47 |
MsaG038911 | MsaG036960 | 0.822672 | 3.685023e-53 | 8.701663e-51 |
MsaG038911 | MsaG036898 | 0.800010 | 2.941756e-48 | 3.978522e-46 |
MsaG038911 | MsaG037527 | 0.802368 | 9.742206e-49 | 1.389844e-46 |
MsaG038911 | MsaG042683 | 0.844582 | 1.294423e-58 | 5.850130e-56 |
MsaG038911 | MsaG042887 | 0.840602 | 1.457684e-57 | 5.799002e-55 |
MsaG038911 | MsaG043209 | 0.802552 | 8.929362e-49 | 1.279276e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038911 | MtrunA17_Chr7g0252041 | 97.521 | 484 | 3 | 5 | 1 | 484 | 1 | 475 | 0.0 | 949 |
MsaG038911 | MtrunA17_Chr3g0131691 | 46.228 | 517 | 179 | 18 | 21 | 483 | 12 | 483 | 3.94e-119 | 358 |
MsaG038911 | MtrunA17_Chr3g0141091 | 44.724 | 199 | 82 | 5 | 285 | 482 | 163 | 334 | 5.64e-40 | 147 |
MsaG038911 | MtrunA17_Chr5g0411541 | 44.878 | 205 | 86 | 5 | 282 | 482 | 141 | 322 | 1.00e-37 | 140 |
MsaG038911 | MtrunA17_Chr1g0211081 | 34.742 | 213 | 118 | 5 | 282 | 476 | 304 | 513 | 7.94e-31 | 125 |
MsaG038911 | MtrunA17_Chr3g0089131 | 67.241 | 58 | 19 | 0 | 400 | 457 | 5 | 62 | 5.68e-21 | 87.4 |
MsaG038911 | MtrunA17_Chr8g0365711 | 29.787 | 188 | 123 | 3 | 288 | 475 | 237 | 415 | 1.14e-18 | 88.2 |
MsaG038911 | MtrunA17_Chr2g0298751 | 33.163 | 196 | 118 | 6 | 286 | 474 | 43 | 232 | 1.63e-18 | 85.1 |
MsaG038911 | MtrunA17_Chr1g0185621 | 34.463 | 177 | 104 | 5 | 285 | 457 | 465 | 633 | 2.50e-18 | 88.2 |
MsaG038911 | MtrunA17_Chr3g0135471 | 69.767 | 43 | 13 | 0 | 415 | 457 | 1 | 43 | 3.08e-15 | 70.5 |
MsaG038911 | MtrunA17_Chr5g0400671 | 29.412 | 187 | 110 | 5 | 295 | 475 | 154 | 324 | 1.45e-14 | 74.7 |
MsaG038911 | MtrunA17_Chr5g0400661 | 26.263 | 198 | 135 | 4 | 288 | 475 | 138 | 334 | 1.88e-14 | 74.3 |
MsaG038911 | MtrunA17_Chr2g0318461 | 67.442 | 43 | 14 | 0 | 415 | 457 | 1 | 43 | 2.35e-14 | 67.8 |
MsaG038911 | MtrunA17_Chr4g0002801 | 29.787 | 188 | 112 | 7 | 297 | 475 | 154 | 330 | 4.41e-14 | 73.2 |
MsaG038911 | MtrunA17_Chr2g0280161 | 28.931 | 159 | 98 | 3 | 297 | 453 | 179 | 324 | 7.05e-14 | 72.8 |
MsaG038911 | MtrunA17_Chr8g0346161 | 57.895 | 57 | 24 | 0 | 293 | 349 | 289 | 345 | 7.97e-14 | 73.6 |
MsaG038911 | MtrunA17_Chr2g0320291 | 28.758 | 153 | 94 | 1 | 283 | 435 | 121 | 258 | 8.46e-14 | 72.4 |
MsaG038911 | MtrunA17_Chr7g0275821 | 45.977 | 87 | 44 | 1 | 293 | 376 | 250 | 336 | 1.01e-13 | 73.2 |
MsaG038911 | MtrunA17_Chr4g0028071 | 51.562 | 64 | 31 | 0 | 288 | 351 | 142 | 205 | 1.01e-13 | 72.4 |
MsaG038911 | MtrunA17_Chr4g0052841 | 25.510 | 196 | 133 | 4 | 286 | 476 | 283 | 470 | 1.07e-13 | 73.2 |
MsaG038911 | MtrunA17_Chr8g0346151 | 60.000 | 55 | 22 | 0 | 293 | 347 | 277 | 331 | 1.38e-13 | 72.8 |
MsaG038911 | MtrunA17_Chr3g0089121 | 50.000 | 80 | 29 | 2 | 324 | 401 | 1 | 71 | 2.81e-13 | 66.2 |
MsaG038911 | MtrunA17_Chr4g0049331 | 25.352 | 213 | 121 | 5 | 272 | 466 | 107 | 299 | 3.12e-13 | 70.5 |
MsaG038911 | MtrunA17_Chr8g0366751 | 33.133 | 166 | 96 | 4 | 293 | 451 | 460 | 617 | 3.91e-13 | 71.6 |
MsaG038911 | MtrunA17_Chr4g0052821 | 27.551 | 196 | 125 | 5 | 288 | 476 | 283 | 468 | 4.34e-13 | 71.2 |
MsaG038911 | MtrunA17_Chr4g0002781 | 28.856 | 201 | 123 | 8 | 282 | 475 | 162 | 349 | 6.55e-13 | 70.1 |
MsaG038911 | MtrunA17_Chr7g0260841 | 42.045 | 88 | 44 | 1 | 270 | 350 | 323 | 410 | 1.07e-12 | 70.1 |
MsaG038911 | MtrunA17_Chr4g0033391 | 28.293 | 205 | 128 | 5 | 270 | 473 | 125 | 311 | 1.62e-12 | 68.6 |
MsaG038911 | MtrunA17_Chr5g0411341 | 29.231 | 195 | 119 | 5 | 293 | 479 | 491 | 674 | 1.71e-12 | 69.7 |
MsaG038911 | MtrunA17_Chr3g0089111 | 42.982 | 114 | 54 | 4 | 221 | 324 | 113 | 225 | 1.81e-12 | 67.0 |
MsaG038911 | MtrunA17_Chr4g0054571 | 28.169 | 142 | 97 | 2 | 297 | 438 | 152 | 288 | 8.05e-12 | 66.6 |
MsaG038911 | MtrunA17_Chr5g0400621 | 30.189 | 159 | 97 | 4 | 296 | 453 | 158 | 303 | 9.72e-12 | 66.2 |
MsaG038911 | MtrunA17_Chr7g0225901 | 27.461 | 193 | 111 | 5 | 270 | 453 | 62 | 234 | 1.25e-11 | 65.1 |
MsaG038911 | MtrunA17_Chr8g0336681 | 26.752 | 157 | 110 | 3 | 297 | 453 | 158 | 309 | 1.71e-11 | 65.5 |
MsaG038911 | MtrunA17_Chr2g0307131 | 27.184 | 206 | 126 | 6 | 270 | 470 | 156 | 342 | 2.15e-11 | 65.5 |
MsaG038911 | MtrunA17_Chr5g0404921 | 63.462 | 104 | 18 | 1 | 53 | 156 | 1 | 84 | 2.77e-11 | 60.5 |
MsaG038911 | MtrunA17_Chr2g0333621 | 25.248 | 202 | 134 | 4 | 281 | 476 | 122 | 312 | 4.00e-11 | 64.3 |
MsaG038911 | MtrunA17_Chr4g0033291 | 27.273 | 220 | 139 | 6 | 256 | 473 | 119 | 319 | 4.30e-11 | 64.3 |
MsaG038911 | MtrunA17_Chr0c01g0489461 | 28.571 | 217 | 116 | 9 | 264 | 447 | 157 | 367 | 7.63e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG038911 | AT3G26744.1 | 55.102 | 392 | 138 | 11 | 119 | 483 | 113 | 493 | 7.98e-117 | 352 |
MsaG038911 | AT3G26744.4 | 55.102 | 392 | 138 | 11 | 119 | 483 | 113 | 493 | 7.98e-117 | 352 |
MsaG038911 | AT3G26744.2 | 55.102 | 392 | 138 | 11 | 119 | 483 | 113 | 493 | 7.98e-117 | 352 |
MsaG038911 | AT1G12860.1 | 56.676 | 367 | 111 | 10 | 128 | 483 | 120 | 449 | 5.47e-112 | 338 |
MsaG038911 | AT3G26744.6 | 54.098 | 366 | 130 | 11 | 119 | 457 | 113 | 467 | 2.11e-100 | 310 |
MsaG038911 | AT1G12860.2 | 55.357 | 336 | 112 | 10 | 128 | 457 | 120 | 423 | 3.47e-95 | 295 |
MsaG038911 | AT5G65640.1 | 44.175 | 206 | 95 | 4 | 280 | 482 | 160 | 348 | 7.97e-38 | 142 |
MsaG038911 | AT5G10570.1 | 42.927 | 205 | 87 | 4 | 280 | 482 | 136 | 312 | 1.72e-33 | 129 |
MsaG038911 | AT2G16910.1 | 40.102 | 197 | 99 | 6 | 294 | 476 | 313 | 504 | 5.32e-31 | 126 |
MsaG038911 | AT5G65640.2 | 70.270 | 74 | 19 | 1 | 280 | 350 | 160 | 233 | 2.09e-21 | 94.7 |
MsaG038911 | AT1G12860.3 | 38.725 | 204 | 95 | 8 | 128 | 326 | 120 | 298 | 1.23e-18 | 87.0 |
MsaG038911 | AT5G57150.1 | 32.240 | 183 | 115 | 4 | 293 | 472 | 52 | 228 | 1.24e-17 | 82.8 |
MsaG038911 | AT3G26744.5 | 36.752 | 234 | 112 | 10 | 119 | 325 | 113 | 337 | 5.12e-17 | 82.8 |
MsaG038911 | AT4G29930.2 | 30.323 | 155 | 88 | 3 | 294 | 448 | 53 | 187 | 2.37e-16 | 78.6 |
MsaG038911 | AT4G29930.5 | 30.323 | 155 | 88 | 3 | 294 | 448 | 53 | 187 | 7.43e-16 | 77.4 |
MsaG038911 | AT5G57150.3 | 33.125 | 160 | 98 | 4 | 293 | 449 | 53 | 206 | 7.99e-16 | 77.0 |
MsaG038911 | AT5G57150.2 | 33.333 | 159 | 97 | 4 | 293 | 448 | 53 | 205 | 1.06e-15 | 76.6 |
MsaG038911 | AT5G57150.5 | 33.333 | 159 | 97 | 4 | 293 | 448 | 52 | 204 | 1.27e-15 | 76.3 |
MsaG038911 | AT4G29930.6 | 30.323 | 155 | 91 | 4 | 294 | 448 | 53 | 190 | 2.68e-15 | 75.5 |
MsaG038911 | AT2G28160.1 | 36.283 | 113 | 59 | 2 | 239 | 351 | 88 | 187 | 2.72e-15 | 77.4 |
MsaG038911 | AT2G28160.2 | 36.283 | 113 | 59 | 2 | 239 | 351 | 88 | 187 | 3.24e-15 | 77.0 |
MsaG038911 | AT5G57150.4 | 33.333 | 159 | 97 | 4 | 293 | 448 | 53 | 205 | 6.67e-15 | 75.1 |
MsaG038911 | AT2G46510.1 | 46.914 | 81 | 35 | 1 | 278 | 350 | 370 | 450 | 7.94e-15 | 77.4 |
MsaG038911 | AT4G29930.4 | 47.761 | 67 | 35 | 0 | 294 | 360 | 53 | 119 | 1.63e-14 | 72.4 |
MsaG038911 | AT4G09820.1 | 33.333 | 153 | 67 | 4 | 288 | 437 | 353 | 473 | 2.08e-14 | 75.9 |
MsaG038911 | AT4G29930.1 | 47.761 | 67 | 35 | 0 | 294 | 360 | 53 | 119 | 3.47e-14 | 72.8 |
MsaG038911 | AT4G29930.3 | 47.059 | 68 | 36 | 0 | 293 | 360 | 52 | 119 | 4.98e-14 | 72.8 |
MsaG038911 | AT4G29930.7 | 47.059 | 68 | 36 | 0 | 293 | 360 | 52 | 119 | 4.98e-14 | 72.8 |
MsaG038911 | AT1G01260.1 | 40.650 | 123 | 56 | 3 | 242 | 359 | 392 | 502 | 1.06e-13 | 73.9 |
MsaG038911 | AT1G01260.2 | 40.650 | 123 | 56 | 3 | 242 | 359 | 392 | 502 | 1.06e-13 | 73.9 |
MsaG038911 | AT1G01260.3 | 40.650 | 123 | 56 | 3 | 242 | 359 | 392 | 502 | 1.06e-13 | 73.9 |
MsaG038911 | AT4G17880.1 | 30.159 | 189 | 114 | 6 | 293 | 479 | 414 | 586 | 1.86e-13 | 73.2 |
MsaG038911 | AT5G46760.1 | 31.707 | 164 | 94 | 5 | 293 | 451 | 413 | 563 | 3.98e-13 | 72.0 |
MsaG038911 | AT1G32640.1 | 29.744 | 195 | 108 | 6 | 293 | 479 | 450 | 623 | 5.39e-13 | 71.6 |
MsaG038911 | AT4G00870.1 | 47.761 | 67 | 33 | 1 | 288 | 352 | 240 | 306 | 2.53e-12 | 68.9 |
MsaG038911 | AT1G10610.3 | 41.379 | 87 | 46 | 1 | 271 | 352 | 138 | 224 | 3.15e-12 | 68.2 |
MsaG038911 | AT2G22760.2 | 23.669 | 169 | 118 | 4 | 286 | 453 | 110 | 268 | 3.96e-12 | 67.4 |
MsaG038911 | AT1G10610.2 | 41.379 | 87 | 46 | 1 | 271 | 352 | 205 | 291 | 4.64e-12 | 68.2 |
MsaG038911 | AT5G46830.1 | 31.250 | 192 | 96 | 8 | 293 | 470 | 341 | 510 | 6.24e-12 | 68.2 |
MsaG038911 | AT1G10610.1 | 41.379 | 87 | 46 | 1 | 271 | 352 | 235 | 321 | 6.79e-12 | 67.8 |
MsaG038911 | AT2G22760.1 | 23.669 | 169 | 118 | 4 | 286 | 453 | 110 | 268 | 1.16e-11 | 65.9 |
MsaG038911 | AT2G22770.1 | 26.752 | 157 | 110 | 3 | 286 | 438 | 123 | 278 | 4.73e-11 | 64.3 |
MsaG038911 | AT4G16430.1 | 41.975 | 81 | 40 | 1 | 277 | 350 | 295 | 375 | 5.28e-11 | 65.1 |
MsaG038911 | AT2G22750.5 | 27.273 | 143 | 97 | 2 | 296 | 438 | 151 | 286 | 8.22e-11 | 63.9 |
Find 138 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCCATTTCAAATGGGTTAT+TGG | 0.117688 | 7:-82268281 | None:intergenic |
GTTTGAAAATGGATTCTTTA+TGG | 0.140965 | 7:+82268303 | MsaT038911.1:CDS |
TTTGAAATGGGGTTTGAAAA+TGG | 0.212995 | 7:+82268292 | MsaT038911.1:CDS |
AATCTATGGTGTTTGTGTTT+TGG | 0.283895 | 7:-82268195 | None:intergenic |
TCAGGTTCGGGTTGTGGTTC+GGG | 0.284310 | 7:-82268088 | None:intergenic |
TTTGAAAATGGATTCTTTAT+GGG | 0.287664 | 7:+82268304 | MsaT038911.1:CDS |
TAGAAGTTGTTGTTGTTATC+AGG | 0.296637 | 7:-82268106 | None:intergenic |
ATCAGGTTCGGGTTGTGGTT+CGG | 0.308632 | 7:-82268089 | None:intergenic |
TTGTGTTTAGGTTCGGAGTT+AGG | 0.321519 | 7:-82268001 | None:intergenic |
ACCAATAACCCATTTGAAAT+GGG | 0.328953 | 7:+82268280 | MsaT038911.1:CDS |
TCAGCCATCAAATTCTTTGC+AGG | 0.331079 | 7:-82268766 | None:intergenic |
GTTGTTGTTGTTATCAGGTT+CGG | 0.335301 | 7:-82268101 | None:intergenic |
TACCAATAACCCATTTGAAA+TGG | 0.336052 | 7:+82268279 | MsaT038911.1:CDS |
TGGATTTGAAATTGAATCTA+TGG | 0.348162 | 7:-82268209 | None:intergenic |
AGAGAAAGGTGGAGAAGAGC+TGG | 0.362560 | 7:+82268590 | MsaT038911.1:CDS |
TTGTTGTTGTTATCAGGTTC+GGG | 0.363227 | 7:-82268100 | None:intergenic |
GCTATCTACCATGAGGGCTT+TGG | 0.366010 | 7:+82269941 | MsaT038911.1:CDS |
TCAAATGGGACTGTTGTTAC+TGG | 0.376369 | 7:+82268709 | MsaT038911.1:CDS |
AACAAGAATCACCTTCTTCA+TGG | 0.390694 | 7:+82267972 | MsaT038911.1:CDS |
TACAGGTGGAAGTTAGAGTA+AGG | 0.391657 | 7:+82269865 | MsaT038911.1:intron |
AGGGACCCACCCATGAAAAC+AGG | 0.394342 | 7:-82268349 | None:intergenic |
TTGTTATCAGGTTCGGGTTG+TGG | 0.401185 | 7:-82268094 | None:intergenic |
TGTGGTTCGGGTTTGAAGAA+AGG | 0.402846 | 7:-82268076 | None:intergenic |
AATGATTTGAATAATTCAAA+TGG | 0.403338 | 7:+82268694 | MsaT038911.1:CDS |
CGCTGTTTCAGAAGCGTCGT+GGG | 0.407593 | 7:+82268524 | MsaT038911.1:CDS |
GCTGTTATCAGTTGTTTCAA+TGG | 0.414184 | 7:+82269990 | MsaT038911.1:CDS |
GTGGTTGTTGTGTTTAGGTT+CGG | 0.421630 | 7:-82268008 | None:intergenic |
TGTTCGTGGTTGTTGTGTTT+AGG | 0.423157 | 7:-82268013 | None:intergenic |
TGATGATGTTGTTGTGGTTG+TGG | 0.425371 | 7:-82268466 | None:intergenic |
GCAGCAATGCAGAGAAGGTC+AGG | 0.429129 | 7:+82270251 | MsaT038911.1:intron |
ATGAACTTGTTGAGGTGGTA+AGG | 0.429477 | 7:-82267909 | None:intergenic |
TAATAATCTTCATAATGAAC+TGG | 0.430336 | 7:+82269495 | MsaT038911.1:CDS |
GAAGGTTGCAGCAGTGAGCC+AGG | 0.431678 | 7:-82269529 | None:intergenic |
GCTTCCTGCAAAGAATTTGA+TGG | 0.433280 | 7:+82268762 | MsaT038911.1:CDS |
CAGCACTGCTTTAATTTGCT+CGG | 0.447013 | 7:-82270283 | None:intergenic |
TAGATCCTCTTTGACTCGAC+AGG | 0.449537 | 7:-82269599 | None:intergenic |
GTGGTTCGGGTTTGAAGAAA+GGG | 0.450268 | 7:-82268075 | None:intergenic |
AGCACTGCTTTAATTTGCTC+GGG | 0.451779 | 7:-82270282 | None:intergenic |
GAAGAAGGAAGTGGTGGTGG+TGG | 0.454840 | 7:+82268616 | MsaT038911.1:CDS |
GCAATAGCTATTGCTATGGC+TGG | 0.459874 | 7:+82268043 | MsaT038911.1:CDS |
TATCATTGAGTTTCTTCCTC+CGG | 0.461791 | 7:-82268795 | None:intergenic |
CCTTGGATTGGATGTTCAGC+AGG | 0.462769 | 7:+82269968 | MsaT038911.1:CDS |
GAAGGAAGTGGTGGTGGTGG+TGG | 0.463647 | 7:+82268619 | MsaT038911.1:CDS |
ATGATAGGTTGTATATGCTT+AGG | 0.465770 | 7:+82268812 | MsaT038911.1:CDS |
GGCTTTGGATAACCTTGGAT+TGG | 0.469562 | 7:+82269956 | MsaT038911.1:CDS |
TTCCCCACGGTCTCCAACCT+CGG | 0.472317 | 7:-82268559 | None:intergenic |
GAGAAGAGCTGGGAAGAAGA+AGG | 0.472684 | 7:+82268601 | MsaT038911.1:CDS |
AATTATGATTCTGATGAGAA+TGG | 0.474232 | 7:+82268670 | MsaT038911.1:CDS |
GGCGTTGGAGATTCCGAGGT+TGG | 0.477216 | 7:+82268546 | MsaT038911.1:CDS |
TCGGTGGAGTGGGTGTCAAC+GGG | 0.480196 | 7:-82269570 | None:intergenic |
ATGATTTGAATAATTCAAAT+GGG | 0.485439 | 7:+82268695 | MsaT038911.1:CDS |
GCAAATTAAAGCAGTGCTGT+TGG | 0.486197 | 7:+82270287 | MsaT038911.1:CDS |
CATGAGAAAATTGTCTGGTA+AGG | 0.488924 | 7:-82268170 | None:intergenic |
TTTGGGGCTTAGCAAGTCAC+CGG | 0.489029 | 7:-82269626 | None:intergenic |
TTTCAAACCCCATTTCAAAT+GGG | 0.490689 | 7:-82268288 | None:intergenic |
CTATTGCAATGTCTTGTTCG+TGG | 0.492928 | 7:-82268027 | None:intergenic |
ACAAAACATATGAATGTTGA+CGG | 0.497241 | 7:-82269898 | None:intergenic |
TTGGATTCAGCGGGCTACCA+TGG | 0.497757 | 7:+82270306 | MsaT038911.1:CDS |
TCAGAAGCGTCGTGGGGCGT+TGG | 0.498023 | 7:+82268531 | MsaT038911.1:CDS |
CGCTTCTGAAACAGCGTCGT+GGG | 0.499455 | 7:-82268517 | None:intergenic |
GTCGGTGGAGTGGGTGTCAA+CGG | 0.499586 | 7:-82269571 | None:intergenic |
ATGAGGGCTTTGGATAACCT+TGG | 0.500549 | 7:+82269951 | MsaT038911.1:CDS |
AGGAAACTCAGAAGCTGAAA+GGG | 0.502922 | 7:-82268368 | None:intergenic |
GAAGAAGAAGGAAGTGGTGG+TGG | 0.503536 | 7:+82268613 | MsaT038911.1:CDS |
GAGAAAGGTGGAGAAGAGCT+GGG | 0.504559 | 7:+82268591 | MsaT038911.1:CDS |
TGTTGTTGTGGTTCAGTCCA+AGG | 0.506094 | 7:-82267947 | None:intergenic |
ATGGACAGGGCTTCAATACT+CGG | 0.509966 | 7:+82269433 | MsaT038911.1:CDS |
GAAGCACTGAAAGGTGGTAC+TGG | 0.513909 | 7:-82268415 | None:intergenic |
GGAGGAAGAAACTCAATGAT+AGG | 0.514773 | 7:+82268797 | MsaT038911.1:CDS |
AGCTGGGAAGAAGAAGGAAG+TGG | 0.518800 | 7:+82268607 | MsaT038911.1:CDS |
TCTCTTCTTCTTGTTCCCCA+CGG | 0.521728 | 7:-82268572 | None:intergenic |
TGGTGCATGAGAAAATTGTC+TGG | 0.522663 | 7:-82268175 | None:intergenic |
ATTATGATTCTGATGAGAAT+GGG | 0.525864 | 7:+82268671 | MsaT038911.1:CDS |
ATTTGATGGCTGAGAGGCGC+CGG | 0.526012 | 7:+82268776 | MsaT038911.1:CDS |
CAGGGAAGAGTCGGTGGAGT+GGG | 0.527264 | 7:-82269580 | None:intergenic |
GTCAAAGAGGATCTATATCC+CGG | 0.532043 | 7:+82269607 | MsaT038911.1:CDS |
GAGGAAACTCAGAAGCTGAA+AGG | 0.532923 | 7:-82268369 | None:intergenic |
TCAGAAGGGGAAGAAGAAGA+AGG | 0.533310 | 7:+82268738 | MsaT038911.1:CDS |
TGAACTTGTTGAGGTGGTAA+GGG | 0.534290 | 7:-82267908 | None:intergenic |
ATAATACTCTCACTATACCT+TGG | 0.539865 | 7:+82267930 | MsaT038911.1:CDS |
ACAGGTGGAAGTTAGAGTAA+GGG | 0.540261 | 7:+82269866 | MsaT038911.1:intron |
AGCAGTGCTGTTGGATTCAG+CGG | 0.541017 | 7:+82270296 | MsaT038911.1:CDS |
CAGAAGGGGAAGAAGAAGAA+GGG | 0.544979 | 7:+82268739 | MsaT038911.1:CDS |
GTGGAAGTTAGAGTAAGGGA+AGG | 0.547671 | 7:+82269870 | MsaT038911.1:CDS |
GATTCCGAGGTTGGAGACCG+TGG | 0.550901 | 7:+82268555 | MsaT038911.1:CDS |
CCAATAACCCATTTGAAATG+GGG | 0.552722 | 7:+82268281 | MsaT038911.1:CDS |
AGATGCAGTTGACTACTTGA+AGG | 0.553444 | 7:+82269456 | MsaT038911.1:CDS |
TCTTAGCAGCAATGCAGAGA+AGG | 0.556860 | 7:+82270246 | MsaT038911.1:intron |
ACGCTGTTTCAGAAGCGTCG+TGG | 0.560372 | 7:+82268523 | MsaT038911.1:CDS |
TGAAAGCTTGCACTTGCAGA+AGG | 0.560535 | 7:-82269547 | None:intergenic |
CATTGCAATAGCTATTGCTA+TGG | 0.561250 | 7:+82268039 | MsaT038911.1:CDS |
AAGGTTATCCAAAGCCCTCA+TGG | 0.562752 | 7:-82269949 | None:intergenic |
TTTAGGTTCGGAGTTAGGTG+TGG | 0.567779 | 7:-82267996 | None:intergenic |
TGATGATGATGATGTTGTTG+TGG | 0.568352 | 7:-82268472 | None:intergenic |
ATTCCGAGGTTGGAGACCGT+GGG | 0.568857 | 7:+82268556 | MsaT038911.1:CDS |
TGTTACTGGTGGAGATCAGA+AGG | 0.571281 | 7:+82268723 | MsaT038911.1:CDS |
TGGAAGTTAGAGTAAGGGAA+GGG | 0.572558 | 7:+82269871 | MsaT038911.1:CDS |
TGTGGTTGAGCTAGCTCAAG+AGG | 0.578961 | 7:-82268448 | None:intergenic |
ATGAGAAAATTGTCTGGTAA+GGG | 0.579342 | 7:-82268169 | None:intergenic |
GAACAAGAAGAAGAGAAAGG+TGG | 0.581110 | 7:+82268579 | MsaT038911.1:CDS |
TGGGAAGAAGAAGGAAGTGG+TGG | 0.581705 | 7:+82268610 | MsaT038911.1:CDS |
TTAGGTGTGGACCATGAAGA+AGG | 0.581820 | 7:-82267983 | None:intergenic |
GTATTATGAACTTGTTGAGG+TGG | 0.581897 | 7:-82267914 | None:intergenic |
TTGTTGTGAAAGAAAGAGTG+TGG | 0.583509 | 7:-82268229 | None:intergenic |
TCTTCCCTGTCGAGTCAAAG+AGG | 0.586826 | 7:+82269594 | MsaT038911.1:CDS |
GGGACCCACCCATGAAAACA+GGG | 0.591270 | 7:-82268348 | None:intergenic |
AGAAGGGGAAGAAGAAGAAG+GGG | 0.595564 | 7:+82268740 | MsaT038911.1:CDS |
AATGGGACTGTTGTTACTGG+TGG | 0.595592 | 7:+82268712 | MsaT038911.1:CDS |
TTGACTCGACAGGGAAGAGT+CGG | 0.596564 | 7:-82269589 | None:intergenic |
TGATGGCTGAGAGGCGCCGG+AGG | 0.599553 | 7:+82268779 | MsaT038911.1:CDS |
ACTTGAAGGAGCTGCTGCAG+CGG | 0.611585 | 7:+82269470 | MsaT038911.1:CDS |
ACTCGACAGGGAAGAGTCGG+TGG | 0.612573 | 7:-82269586 | None:intergenic |
CAAAGAATTTGATGGCTGAG+AGG | 0.613701 | 7:+82268770 | MsaT038911.1:CDS |
ACAGGGAAGAGTCGGTGGAG+TGG | 0.614037 | 7:-82269581 | None:intergenic |
ATTAGATGTGTTCAGAGCTG+AGG | 0.615420 | 7:+82270019 | MsaT038911.1:CDS |
ATGGTAGATAGCAAAAGTCC+TGG | 0.618329 | 7:-82269930 | None:intergenic |
ATAGAAAACGAAGCACTGAA+AGG | 0.618637 | 7:-82268424 | None:intergenic |
GAACTGGAATCAACTCCACC+TGG | 0.619030 | 7:+82269511 | MsaT038911.1:CDS |
GGGGAACAAGAAGAAGAGAA+AGG | 0.621823 | 7:+82268576 | MsaT038911.1:CDS |
ACTTCATTCAATTCAAACCA+TGG | 0.624434 | 7:-82270323 | None:intergenic |
GTTACTGGTGGAGATCAGAA+GGG | 0.630933 | 7:+82268724 | MsaT038911.1:CDS |
TGTTGTGCCTAAAATTAGCA+AGG | 0.631769 | 7:+82268837 | MsaT038911.1:CDS |
TTGGGGCTTAGCAAGTCACC+GGG | 0.636110 | 7:-82269625 | None:intergenic |
GTGGGGCGTTGGAGATTCCG+AGG | 0.636781 | 7:+82268542 | MsaT038911.1:CDS |
GAAAACGAAGCACTGAAAGG+TGG | 0.640228 | 7:-82268421 | None:intergenic |
CCTGCTGAACATCCAATCCA+AGG | 0.640256 | 7:-82269968 | None:intergenic |
ACGCTTCTGAAACAGCGTCG+TGG | 0.647570 | 7:-82268518 | None:intergenic |
GCAGTGCTGTTGGATTCAGC+GGG | 0.652187 | 7:+82270297 | MsaT038911.1:CDS |
AGATCCTCTTTGACTCGACA+GGG | 0.653087 | 7:-82269598 | None:intergenic |
GCACTGCTTTAATTTGCTCG+GGG | 0.667619 | 7:-82270281 | None:intergenic |
TTACTGGTGGAGATCAGAAG+GGG | 0.669179 | 7:+82268725 | MsaT038911.1:CDS |
GGTTGCAGCAGTGAGCCAGG+TGG | 0.670958 | 7:-82269526 | None:intergenic |
GCTGTTTCAGAAGCGTCGTG+GGG | 0.673826 | 7:+82268525 | MsaT038911.1:CDS |
AGAGTATTATGAACTTGTTG+AGG | 0.689686 | 7:-82267917 | None:intergenic |
TTCCGAGGTTGGAGACCGTG+GGG | 0.692226 | 7:+82268557 | MsaT038911.1:CDS |
GGACCCACCCATGAAAACAG+GGG | 0.693712 | 7:-82268347 | None:intergenic |
GCAGCATCGAGTTCAAGACT+CGG | 0.694688 | 7:-82268391 | None:intergenic |
GCATCGAGTTCAAGACTCGG+AGG | 0.717250 | 7:-82268388 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 82267890 | 82270338 | 82267890 | ID=MsaG038911 |
Chr7 | mRNA | 82267890 | 82270338 | 82267890 | ID=MsaT038911.1;Parent=MsaG038911 |
Chr7 | exon | 82267890 | 82268858 | 82267890 | ID=MsaT038911.1.exon1;Parent=MsaT038911.1 |
Chr7 | CDS | 82267890 | 82268858 | 82267890 | ID=cds.MsaT038911.1;Parent=MsaT038911.1 |
Chr7 | exon | 82269433 | 82269663 | 82269433 | ID=MsaT038911.1.exon2;Parent=MsaT038911.1 |
Chr7 | CDS | 82269433 | 82269663 | 82269433 | ID=cds.MsaT038911.1;Parent=MsaT038911.1 |
Chr7 | exon | 82269870 | 82270040 | 82269870 | ID=MsaT038911.1.exon3;Parent=MsaT038911.1 |
Chr7 | CDS | 82269870 | 82270040 | 82269870 | ID=cds.MsaT038911.1;Parent=MsaT038911.1 |
Chr7 | exon | 82270255 | 82270338 | 82270255 | ID=MsaT038911.1.exon4;Parent=MsaT038911.1 |
Chr7 | CDS | 82270255 | 82270338 | 82270255 | ID=cds.MsaT038911.1;Parent=MsaT038911.1 |
Gene Sequence |
Protein sequence |