AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG039213

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG039213 MtrunA17_Chr7g0255821 96.238 824 28 2 126 948 1 822 0.0 1640
MsaG039213 MtrunA17_Chr2g0320751 30.664 874 485 21 178 946 158 1015 1.44e-117 384
MsaG039213 MtrunA17_Chr1g0168031 34.018 682 361 15 320 924 463 1132 4.85e-116 383
MsaG039213 MtrunA17_Chr2g0281601 28.180 802 372 17 313 946 536 1301 1.15e-93 323
MsaG039213 MtrunA17_Chr1g0212331 31.670 521 288 11 490 946 522 1038 4.19e-75 267
MsaG039213 MtrunA17_Chr4g0024921 30.495 505 272 11 495 946 455 933 1.74e-61 226
MsaG039213 MtrunA17_Chr4g0024921 31.667 120 78 1 377 492 260 379 1.62e-14 78.2
MsaG039213 MtrunA17_Chr3g0083491 22.998 587 343 17 421 920 729 1293 2.37e-31 133
MsaG039213 MtrunA17_Chr4g0040301 23.980 613 336 20 385 948 18 549 7.09e-31 130
MsaG039213 MtrunA17_Chr7g0248031 25.540 556 262 19 378 904 1015 1447 1.63e-24 111
MsaG039213 MtrunA17_Chr4g0066741 28.169 284 169 8 378 655 209 463 2.13e-23 107
MsaG039213 MtrunA17_Chr4g0066741 36.242 149 92 2 771 919 485 630 4.76e-19 93.2
MsaG039213 MtrunA17_Chr7g0257101 36.364 198 109 6 728 922 1152 1335 4.85e-23 106
MsaG039213 MtrunA17_Chr7g0257101 25.581 301 176 9 378 655 599 874 2.03e-20 97.8
MsaG039213 MtrunA17_Chr4g0017211 28.520 277 162 7 378 633 1471 1732 9.85e-23 105
MsaG039213 MtrunA17_Chr4g0017211 34.074 135 80 3 795 924 1830 1960 1.61e-16 85.1
MsaG039213 MtrunA17_Chr2g0286291 27.562 283 172 7 378 655 212 466 4.48e-22 102
MsaG039213 MtrunA17_Chr2g0286291 38.889 126 76 1 794 919 509 633 5.12e-18 89.7
MsaG039213 MtrunA17_Chr1g0175191 28.082 292 169 10 377 655 541 804 1.35e-21 101
MsaG039213 MtrunA17_Chr1g0175191 30.734 218 128 6 722 922 994 1205 7.90e-21 99.4
MsaG039213 MtrunA17_Chr8g0384531 40.833 120 69 2 797 916 760 877 2.39e-21 100
MsaG039213 MtrunA17_Chr3g0137091 32.973 185 120 3 759 942 595 776 9.10e-21 99.0
MsaG039213 MtrunA17_Chr3g0137091 24.110 365 208 11 326 661 265 589 7.44e-17 86.3
MsaG039213 MtrunA17_Chr1g0205891 36.875 160 97 3 767 925 677 833 2.55e-20 97.4
MsaG039213 MtrunA17_Chr1g0205891 25.850 294 174 9 378 655 397 662 5.97e-14 76.6
MsaG039213 MtrunA17_Chr5g0394201 36.774 155 95 2 771 925 668 819 4.59e-20 96.3
MsaG039213 MtrunA17_Chr5g0394201 24.658 292 180 8 378 655 384 649 3.97e-14 77.0
MsaG039213 MtrunA17_Chr5g0428401 30.808 198 109 4 421 590 487 684 7.88e-20 95.9
MsaG039213 MtrunA17_Chr5g0428401 25.490 306 167 9 700 947 1352 1654 4.48e-16 83.6
MsaG039213 MtrunA17_Chr5g0442141 40.268 149 86 2 771 919 929 1074 1.26e-19 95.1
MsaG039213 MtrunA17_Chr5g0442141 25.256 293 172 9 379 655 639 900 3.30e-17 87.4
MsaG039213 MtrunA17_Chr3g0095091 39.597 149 87 2 771 919 883 1028 2.00e-19 94.7
MsaG039213 MtrunA17_Chr3g0095091 25.172 290 176 7 379 655 593 854 2.55e-17 87.8
MsaG039213 MtrunA17_Chr1g0183681 33.553 152 97 2 774 925 734 881 3.92e-18 90.1
MsaG039213 MtrunA17_Chr1g0163011 24.815 270 163 7 375 627 214 460 1.36e-17 88.2
MsaG039213 MtrunA17_Chr1g0163011 32.192 146 95 2 774 919 569 710 2.45e-15 80.9
MsaG039213 MtrunA17_Chr7g0232121 28.000 200 127 3 762 946 352 549 1.96e-17 87.8
MsaG039213 MtrunA17_Chr7g0232121 24.129 373 189 16 324 662 35 347 3.57e-14 77.0
MsaG039213 MtrunA17_Chr7g0231521 28.000 200 127 3 762 946 273 470 2.04e-17 87.4
MsaG039213 MtrunA17_Chr7g0231521 26.531 245 102 11 324 546 35 223 1.90e-11 68.2
MsaG039213 MtrunA17_Chr5g0403921 38.655 119 72 1 795 913 524 641 5.89e-17 85.9
MsaG039213 MtrunA17_Chr5g0403921 22.591 301 184 9 378 655 205 479 1.46e-16 84.7
MsaG039213 MtrunA17_Chr5g0393461 32.203 177 114 3 771 943 534 708 6.67e-17 85.9
MsaG039213 MtrunA17_Chr5g0393461 25.581 301 183 8 375 655 208 487 1.26e-13 75.5
MsaG039213 MtrunA17_Chr4g0066651 38.525 122 72 2 799 919 1330 1449 1.38e-16 85.5
MsaG039213 MtrunA17_Chr4g0066651 25.839 298 172 9 378 655 1010 1278 2.84e-16 84.3
MsaG039213 MtrunA17_Chr7g0233001 39.552 134 75 2 795 923 339 471 3.65e-16 82.8
MsaG039213 MtrunA17_Chr2g0320781 40.984 122 66 2 795 911 111 231 4.48e-16 79.0
MsaG039213 MtrunA17_Chr4g0047081 38.060 134 77 2 795 923 1054 1186 8.72e-16 82.8
MsaG039213 MtrunA17_Chr4g0052341 35.294 153 90 4 797 942 1080 1230 1.25e-15 82.4
MsaG039213 MtrunA17_Chr4g0052341 21.607 361 213 11 317 662 734 1039 5.60e-13 73.6
MsaG039213 MtrunA17_Chr7g0225791 38.060 134 77 2 795 923 1104 1236 1.72e-15 81.6
MsaG039213 MtrunA17_Chr1g0190381 35.714 168 94 2 770 925 183 348 2.12e-15 80.5
MsaG039213 MtrunA17_Chr7g0232991 36.090 133 80 2 795 923 479 610 5.35e-14 76.3
MsaG039213 MtrunA17_Chr8g0348721 34.337 166 102 4 771 936 1309 1467 3.86e-13 74.3
MsaG039213 MtrunA17_Chr8g0348721 24.752 303 183 6 378 655 1008 1290 5.33e-13 73.6
MsaG039213 MtrunA17_Chr7g0233021 39.167 120 65 3 795 909 1052 1168 2.01e-12 71.6
MsaG039213 MtrunA17_Chr7g0232971 36.885 122 70 2 795 910 1115 1235 2.63e-12 71.2
MsaG039213 MtrunA17_Chr7g0233031 37.037 135 76 3 795 923 1064 1195 4.84e-12 70.5
MsaG039213 MtrunA17_Chr4g0069451 33.898 118 76 1 795 912 488 603 7.23e-12 69.3
MsaG039213 MtrunA17_Chr2g0296421 34.014 147 88 4 770 911 843 985 1.82e-11 68.6
MsaG039213 MtrunA17_Chr3g0114161 30.822 146 92 4 770 910 1045 1186 2.35e-11 68.2
MsaG039213 MtrunA17_Chr8g0352361 36.220 127 74 3 790 911 712 836 3.05e-11 67.8
MsaG039213 MtrunA17_Chr7g0224051 29.940 167 108 4 749 910 893 1055 3.38e-11 67.8
MsaG039213 MtrunA17_Chr1g0191141 39.362 94 56 1 817 910 949 1041 4.03e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG039213 AT5G05130.1 57.913 853 304 10 126 942 42 875 0.0 972
MsaG039213 AT5G22750.1 36.063 696 355 15 327 946 347 1028 8.60e-122 396
MsaG039213 AT5G43530.1 35.736 666 359 15 315 924 604 1256 4.87e-118 391
MsaG039213 AT1G11100.5 31.929 736 351 19 318 946 389 1081 1.21e-99 337
MsaG039213 AT1G11100.1 31.929 736 351 19 318 946 532 1224 7.26e-99 337
MsaG039213 AT1G61140.3 27.764 814 400 18 281 946 345 1118 1.15e-91 315
MsaG039213 AT1G61140.1 27.764 814 400 18 281 946 503 1276 6.47e-91 315
MsaG039213 AT3G16600.1 28.638 646 328 16 320 931 45 591 9.26e-79 270
MsaG039213 AT1G11100.3 33.460 526 273 11 489 946 609 1125 3.59e-76 271
MsaG039213 AT1G11100.2 33.460 526 273 11 489 946 751 1267 7.12e-76 271
MsaG039213 AT1G11100.4 33.460 526 273 11 489 946 752 1268 7.71e-76 271
MsaG039213 AT1G50410.2 31.358 523 284 11 490 946 466 979 1.73e-71 256
MsaG039213 AT1G50410.2 28.704 216 74 7 320 483 218 405 3.33e-15 80.9
MsaG039213 AT1G50410.1 31.358 523 284 11 490 946 466 979 1.73e-71 256
MsaG039213 AT1G50410.1 28.704 216 74 7 320 483 218 405 3.33e-15 80.9
MsaG039213 AT1G50410.3 31.358 523 284 11 490 946 466 979 1.73e-71 256
MsaG039213 AT1G50410.3 28.704 216 74 7 320 483 218 405 3.33e-15 80.9
MsaG039213 AT3G20010.2 31.845 515 289 11 489 946 245 754 1.95e-71 252
MsaG039213 AT3G20010.3 31.845 515 289 11 489 946 270 779 4.58e-71 251
MsaG039213 AT1G02670.6 30.051 589 305 13 375 922 115 637 5.85e-71 248
MsaG039213 AT1G02670.3 30.051 589 305 13 375 922 142 664 1.82e-70 248
MsaG039213 AT3G20010.1 31.915 517 286 12 489 946 536 1045 3.82e-70 253
MsaG039213 AT3G20010.5 31.915 517 286 12 489 946 536 1045 3.82e-70 253
MsaG039213 AT3G20010.7 31.915 517 286 12 489 946 536 1045 3.82e-70 253
MsaG039213 AT1G02670.7 29.350 569 308 15 377 922 144 641 3.28e-64 229
MsaG039213 AT1G02670.1 29.247 571 310 15 375 922 153 652 3.92e-64 229
MsaG039213 AT1G02670.5 29.152 566 294 13 375 899 115 614 1.03e-62 224
MsaG039213 AT1G02670.2 29.078 564 297 12 375 899 142 641 2.11e-62 224
MsaG039213 AT1G05120.1 29.175 497 288 8 495 946 354 831 2.90e-62 227
MsaG039213 AT1G05120.1 30.769 182 82 5 312 491 124 263 2.05e-17 88.2
MsaG039213 AT1G05120.2 29.175 497 288 8 495 946 397 874 6.91e-62 227
MsaG039213 AT1G05120.2 30.769 182 82 5 312 491 167 306 2.12e-17 88.2
MsaG039213 AT1G61140.2 27.311 476 219 9 281 655 510 959 3.81e-47 183
MsaG039213 AT1G50410.4 30.657 411 220 9 490 839 466 872 2.49e-45 177
MsaG039213 AT1G50410.4 27.652 264 101 9 320 531 218 443 2.56e-15 81.3
MsaG039213 AT3G20010.4 30.882 408 220 10 489 839 536 938 2.21e-44 174
MsaG039213 AT3G20010.6 30.882 408 220 10 489 839 536 938 2.21e-44 174
MsaG039213 AT3G20010.8 30.882 408 220 10 489 839 536 938 2.21e-44 174
MsaG039213 AT1G03750.1 24.924 662 374 21 317 948 129 697 1.30e-37 152
MsaG039213 AT2G02090.1 26.937 568 321 18 375 919 232 728 1.54e-36 149
MsaG039213 AT1G02670.4 29.874 318 169 6 375 653 142 444 4.51e-36 144
MsaG039213 AT3G54460.2 22.759 580 347 18 421 917 456 1017 1.45e-30 130
MsaG039213 AT3G54460.1 22.759 580 347 18 421 917 753 1314 1.46e-30 130
MsaG039213 AT2G40770.2 29.682 283 150 9 421 656 499 779 5.79e-25 113
MsaG039213 AT2G40770.2 26.911 327 208 9 632 933 1278 1598 2.71e-19 94.7
MsaG039213 AT2G40770.1 29.682 283 150 9 421 656 499 779 5.79e-25 113
MsaG039213 AT2G40770.1 26.911 327 208 9 632 933 1278 1598 2.71e-19 94.7
MsaG039213 AT2G40770.3 29.682 283 150 9 421 656 499 779 5.79e-25 113
MsaG039213 AT2G40770.3 26.911 327 208 9 632 933 1278 1598 2.71e-19 94.7
MsaG039213 AT3G54280.1 28.520 277 166 7 378 635 1472 1735 8.40e-25 112
MsaG039213 AT3G54280.1 32.164 171 96 4 770 924 1796 1962 1.56e-17 89.0
MsaG039213 AT3G54280.2 28.520 277 166 7 378 635 1503 1766 1.07e-24 112
MsaG039213 AT3G54280.2 32.164 171 96 4 770 924 1827 1993 1.57e-17 89.0
MsaG039213 AT3G57300.1 36.869 198 108 6 728 922 1166 1349 1.49e-22 105
MsaG039213 AT3G57300.1 24.422 303 177 9 378 655 607 882 9.72e-18 89.4
MsaG039213 AT3G57300.4 36.869 198 108 6 728 922 1166 1349 1.49e-22 105
MsaG039213 AT3G57300.4 24.422 303 177 9 378 655 607 882 9.72e-18 89.4
MsaG039213 AT3G57300.2 36.869 198 108 6 728 922 1199 1382 1.57e-22 105
MsaG039213 AT3G57300.2 22.024 336 177 9 378 655 607 915 7.61e-14 77.0
MsaG039213 AT5G18620.1 28.873 284 167 9 378 655 215 469 3.52e-22 103
MsaG039213 AT5G18620.1 38.889 126 76 1 794 919 512 636 1.10e-18 92.4
MsaG039213 AT5G18620.2 28.873 284 167 9 378 655 215 469 3.81e-22 103
MsaG039213 AT5G18620.2 38.889 126 76 1 794 919 512 636 1.11e-18 92.4
MsaG039213 AT5G63950.1 41.667 120 68 2 797 916 752 869 1.46e-21 101
MsaG039213 AT5G63950.2 41.667 120 68 2 797 916 735 852 1.52e-21 101
MsaG039213 AT3G06400.2 28.169 284 169 8 378 655 210 464 2.45e-21 100
MsaG039213 AT3G06400.2 38.889 126 76 1 794 919 507 631 3.34e-18 90.9
MsaG039213 AT3G06400.1 28.169 284 169 8 378 655 210 464 2.47e-21 100
MsaG039213 AT3G06400.1 38.889 126 76 1 794 919 507 631 3.31e-18 90.9
MsaG039213 AT3G06400.3 28.169 284 169 8 378 655 210 464 2.63e-21 100
MsaG039213 AT3G06400.3 38.889 126 76 1 794 919 507 631 3.26e-18 90.9
MsaG039213 AT2G13370.1 40.816 147 84 2 773 919 937 1080 1.01e-20 99.4
MsaG039213 AT2G13370.1 24.606 317 191 9 379 680 647 930 1.74e-16 85.5
MsaG039213 AT2G13370.2 40.816 147 84 2 773 919 937 1080 1.01e-20 99.4
MsaG039213 AT2G13370.2 24.606 317 191 9 379 680 647 930 1.74e-16 85.5
MsaG039213 AT2G13370.3 40.816 147 84 2 773 919 937 1080 1.01e-20 99.4
MsaG039213 AT2G13370.3 24.606 317 191 9 379 680 647 930 1.74e-16 85.5
MsaG039213 AT3G06010.1 38.994 159 91 4 769 925 706 860 1.05e-20 99.0
MsaG039213 AT3G06010.1 22.970 431 244 14 286 693 361 726 8.54e-15 79.7
MsaG039213 AT3G12810.1 27.986 293 168 10 377 655 556 819 1.29e-20 99.0
MsaG039213 AT3G12810.1 33.495 206 110 7 736 922 1021 1218 2.03e-19 95.1
MsaG039213 AT3G12810.2 27.986 293 168 10 377 655 552 815 1.34e-20 99.0
MsaG039213 AT3G12810.2 33.495 206 110 7 736 922 1017 1214 1.83e-19 95.1
MsaG039213 AT5G19310.2 37.736 159 93 4 769 925 424 578 1.40e-19 95.1
MsaG039213 AT5G19310.2 23.267 404 235 14 306 693 100 444 4.91e-14 77.0
MsaG039213 AT5G19310.1 37.736 159 93 4 769 925 688 842 2.10e-19 94.7
MsaG039213 AT5G19310.1 23.267 404 235 14 306 693 364 708 5.62e-14 77.0
MsaG039213 AT4G31900.2 32.704 159 104 2 761 919 469 624 1.03e-18 92.4
MsaG039213 AT4G31900.2 26.756 299 169 10 379 666 206 465 9.21e-18 89.4
MsaG039213 AT4G31900.3 32.704 159 104 2 761 919 510 665 1.20e-18 92.4
MsaG039213 AT4G31900.3 26.756 299 169 10 379 666 247 506 9.41e-18 89.4
MsaG039213 AT4G31900.1 32.704 159 104 2 761 919 510 665 1.23e-18 92.4
MsaG039213 AT4G31900.1 26.756 299 169 10 379 666 247 506 9.28e-18 89.4
MsaG039213 AT2G18760.3 34.868 152 95 2 774 925 785 932 1.89e-18 91.7
MsaG039213 AT2G18760.4 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G18760.1 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G18760.2 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G18760.7 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G18760.5 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G18760.6 37.984 129 78 1 797 925 747 873 2.38e-18 91.3
MsaG039213 AT2G25170.2 32.919 161 105 2 762 922 599 756 4.52e-18 90.5
MsaG039213 AT2G25170.2 23.985 271 150 7 379 620 312 555 1.51e-13 75.9
MsaG039213 AT2G28290.1 36.842 152 91 3 769 919 1067 1214 4.53e-18 90.9
MsaG039213 AT2G28290.1 25.843 356 186 12 320 655 746 1043 2.89e-17 88.2
MsaG039213 AT2G25170.1 32.919 161 105 2 762 922 582 739 4.73e-18 90.5
MsaG039213 AT2G25170.1 22.222 306 176 8 379 655 295 567 1.70e-13 75.5
MsaG039213 AT2G25170.4 32.919 161 105 2 762 922 582 739 4.73e-18 90.5
MsaG039213 AT2G25170.4 22.222 306 176 8 379 655 295 567 1.70e-13 75.5
MsaG039213 AT2G28290.5 36.842 152 91 3 769 919 1068 1215 4.80e-18 90.9
MsaG039213 AT2G28290.5 25.843 356 186 12 320 655 747 1044 2.99e-17 88.2
MsaG039213 AT2G25170.3 32.919 161 105 2 762 922 608 765 4.81e-18 90.5
MsaG039213 AT2G25170.3 23.985 271 150 7 379 620 321 564 1.69e-13 75.5
MsaG039213 AT2G28290.3 36.842 152 91 3 769 919 1067 1214 4.92e-18 90.9
MsaG039213 AT2G28290.3 25.843 356 186 12 320 655 746 1043 3.45e-17 87.8
MsaG039213 AT2G28290.4 36.842 152 91 3 769 919 1067 1214 4.92e-18 90.9
MsaG039213 AT2G28290.4 25.843 356 186 12 320 655 746 1043 3.45e-17 87.8
MsaG039213 AT2G28290.2 36.842 152 91 3 769 919 1067 1214 4.96e-18 90.9
MsaG039213 AT2G28290.2 25.843 356 186 12 320 655 746 1043 3.60e-17 87.8
MsaG039213 AT2G28290.6 36.842 152 91 3 769 919 1068 1215 4.96e-18 90.9
MsaG039213 AT2G28290.6 25.843 356 186 12 320 655 747 1044 3.42e-17 87.8
MsaG039213 AT2G44980.1 31.551 187 123 3 762 946 355 538 7.22e-18 89.4
MsaG039213 AT2G44980.1 25.914 301 176 12 382 662 77 350 1.03e-16 85.9
MsaG039213 AT2G44980.3 32.143 196 120 4 762 946 363 556 1.02e-17 89.0
MsaG039213 AT2G44980.3 25.559 313 177 13 379 662 73 358 5.28e-16 83.6
MsaG039213 AT2G44980.2 32.143 196 120 4 762 946 364 557 1.06e-17 89.0
MsaG039213 AT2G44980.2 25.806 310 174 13 382 662 77 359 1.51e-15 82.0
MsaG039213 AT3G57300.3 24.422 303 177 9 378 655 607 882 1.12e-17 89.4
MsaG039213 AT5G66750.1 40.336 119 70 1 795 913 542 659 1.20e-17 88.6
MsaG039213 AT5G66750.1 24.092 303 177 11 378 655 223 497 5.75e-13 73.6
MsaG039213 AT5G44800.1 32.961 179 109 5 771 942 1000 1174 6.24e-16 84.0
MsaG039213 AT5G44800.1 22.067 358 209 12 320 662 681 983 4.90e-12 70.9
MsaG039213 AT3G19210.3 31.638 177 115 3 771 943 530 704 6.73e-16 83.2
MsaG039213 AT3G19210.2 31.638 177 115 3 771 943 528 702 7.73e-16 83.2
MsaG039213 AT3G19210.1 31.638 177 115 3 771 943 530 704 7.81e-16 83.2
MsaG039213 AT1G08600.1 34.146 164 94 2 774 925 1093 1254 2.10e-14 78.6
MsaG039213 AT1G08600.4 34.146 164 94 2 774 925 1114 1275 2.12e-14 78.6
MsaG039213 AT1G08600.3 34.146 164 94 2 774 925 1114 1275 2.12e-14 78.6
MsaG039213 AT1G08600.2 34.146 164 94 2 774 925 1114 1275 2.12e-14 78.6
MsaG039213 AT1G05490.1 38.060 134 77 2 795 923 1217 1349 3.40e-14 77.8
MsaG039213 AT3G24340.1 36.567 134 79 2 795 923 945 1077 3.64e-14 77.8
MsaG039213 AT2G46020.2 36.145 166 99 4 771 936 1304 1462 5.32e-14 77.4
MsaG039213 AT2G46020.3 36.145 166 99 4 771 936 1304 1462 5.32e-14 77.4
MsaG039213 AT2G46020.4 36.145 166 99 4 771 936 1304 1462 5.32e-14 77.4
MsaG039213 AT2G46020.5 36.145 166 99 4 771 936 1303 1461 5.65e-14 77.4
MsaG039213 AT2G46020.5 24.335 263 159 6 378 621 1002 1243 3.83e-11 68.2
MsaG039213 AT2G46020.1 36.145 166 99 4 771 936 1303 1461 5.65e-14 77.4
MsaG039213 AT2G46020.1 24.335 263 159 6 378 621 1002 1243 3.83e-11 68.2
MsaG039213 AT2G46020.6 36.145 166 99 4 771 936 1303 1461 5.65e-14 77.4
MsaG039213 AT2G46020.6 24.335 263 159 6 378 621 1002 1243 3.83e-11 68.2
MsaG039213 AT1G48310.3 38.136 118 71 1 795 912 486 601 3.16e-13 74.3
MsaG039213 AT1G48310.1 38.136 118 71 1 795 912 486 601 3.47e-13 74.3
MsaG039213 AT1G48310.2 38.136 118 71 1 795 912 491 606 3.52e-13 73.9
MsaG039213 AT5G20420.1 38.947 95 55 2 817 910 1107 1199 3.75e-11 67.8
MsaG039213 AT3G42670.2 37.234 94 58 1 817 910 1101 1193 5.09e-11 67.4
MsaG039213 AT3G42670.3 37.234 94 58 1 817 910 1101 1193 5.09e-11 67.4
MsaG039213 AT3G42670.1 37.234 94 58 1 817 910 1101 1193 5.09e-11 67.4
MsaG039213 AT3G42670.4 37.234 94 58 1 817 910 1103 1195 5.22e-11 67.4

Find 226 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATGTTTGCAGCAATTC+AGG 0.201076 7:+86096825 None:intergenic
AATTGCTGCAAACATTAATT+AGG 0.224811 7:-86096821 MsaT039213.1:CDS
TTGAAGGTTTATATGTATTA+TGG 0.243058 7:-86099908 MsaT039213.1:CDS
GCCCAAGGTCACCATGGTTT+TGG 0.253558 7:-86102071 None:intergenic
CTTTATCAAAGTAGCGATTT+TGG 0.258385 7:+86096545 None:intergenic
TCATCAGTCTTGAAAGATTC+AGG 0.261462 7:+86096615 None:intergenic
TTTGCGGACGGGATGGGATT+AGG 0.262324 7:-86100115 MsaT039213.1:CDS
CTGATGATTTACCGCCGTTT+TGG 0.262594 7:-86100219 MsaT039213.1:CDS
CCCCACCAATGCAGTGTCTT+TGG 0.276924 7:+86099277 None:intergenic
GGATACTCCTGTGAAGAAAT+TGG 0.280994 7:-86099795 MsaT039213.1:CDS
TTGGTAGATGACCTTACTTC+TGG 0.293841 7:+86096564 None:intergenic
TTGCAGCAATTCAGGGTTCT+TGG 0.303442 7:+86096833 None:intergenic
CTGGAGTCGTATGGGTTTAA+AGG 0.312062 7:+86100739 None:intergenic
TGACAAGTCTCAACAATCTT+AGG 0.342045 7:+86099248 None:intergenic
TGCCTCCAGAGTGTACTTAA+TGG 0.342639 7:-86096274 MsaT039213.1:CDS
GAAACCGGCGAGGTAGGTTT+CGG 0.351950 7:+86100840 None:intergenic
TTGCGGACGGGATGGGATTA+GGG 0.354547 7:-86100114 MsaT039213.1:CDS
TGTGAGTCTTCCATGGTGAT+TGG 0.363361 7:+86100886 None:intergenic
GATACTCCTGTGAAGAAATT+GGG 0.364943 7:-86099794 MsaT039213.1:CDS
GGTAGGTTTCGGATTGGGAT+TGG 0.365722 7:+86100851 None:intergenic
CGAGTTTGAAAATTTGATCT+AGG 0.366948 7:+86100368 None:intergenic
CGGTTCAGAAACTAGGGTTT+TGG 0.367071 7:+86100327 None:intergenic
ACAATTACAAGCCGAGGATC+TGG 0.367171 7:-86096108 MsaT039213.1:CDS
TTTATATGTATTATGGTGAT+AGG 0.371908 7:-86099901 MsaT039213.1:CDS
GATAAAATGAAAATGAAAAG+TGG 0.372811 7:-86100058 MsaT039213.1:CDS
TGCGCGGCCGGAGCCTCTCT+CGG 0.374792 7:-86100146 MsaT039213.1:CDS
AGGGCACACGTTTAAATCTA+TGG 0.392764 7:+86101913 None:intergenic
GGGGTGGAGGAGGATTGTTT+TGG 0.395962 7:-86099774 MsaT039213.1:CDS
GTAGGTTTCGGATTGGGATT+GGG 0.396664 7:+86100852 None:intergenic
TGTTAATGCGGGACAGAGTC+AGG 0.398787 7:-86099729 MsaT039213.1:CDS
AGGAGCGAGAGCGGCGGCGA+CGG 0.400378 7:+86100663 None:intergenic
GGCGAGGTAGGTTTCGGATT+GGG 0.403200 7:+86100846 None:intergenic
AAGAGGAGATGGGCTGTTAC+GGG 0.409943 7:-86099686 MsaT039213.1:CDS
TTCGACATGGATAACTCAAT+TGG 0.410437 7:-86099954 MsaT039213.1:CDS
GGTTTAACGGTTCAGAAACT+AGG 0.413284 7:+86100320 None:intergenic
AATAACCTGAGCCCTTTGTT+TGG 0.413400 7:+86096383 None:intergenic
GTCAGCGCGTGTTTCTTTAA+CGG 0.413934 7:+86100438 None:intergenic
GGGAGCTGAGTTGCGGTGTT+CGG 0.416851 7:-86099816 MsaT039213.1:CDS
ATTCCAGTTGTCCACTTTGT+CGG 0.417033 7:-86096674 MsaT039213.1:CDS
GTGAGTCTTCCATGGTGATT+GGG 0.417921 7:+86100887 None:intergenic
ATGTAATTACAATATCTGTT+GGG 0.418594 7:+86096751 None:intergenic
TGGAGCTCTATACTCATTTA+CGG 0.421811 7:+86101940 None:intergenic
TTCGGATTGGGATTGGGAGA+AGG 0.428738 7:+86100858 None:intergenic
TACTTTGATAAAGCTTCTTA+CGG 0.433519 7:-86096535 MsaT039213.1:CDS
TCATAAGAACCATTCTGAAT+AGG 0.433793 7:+86099659 None:intergenic
GAAGAACCTTTAAAAGCAGC+TGG 0.435178 7:-86096441 MsaT039213.1:CDS
GACCGGGATGAGTCGATTGC+AGG 0.436131 7:-86099540 MsaT039213.1:intron
ATGCTAGAAGGAGGGTTTAA+CGG 0.438865 7:+86100307 None:intergenic
TTAAAACATTGCGTCTTGAC+GGG 0.446540 7:-86096416 MsaT039213.1:CDS
TTAACGTTGCTATCGTTGAT+TGG 0.448424 7:-86100085 MsaT039213.1:CDS
GCGCCGACAAAGTGGACAAC+TGG 0.449021 7:+86096671 None:intergenic
TAAAGCTTCTTACGGAATCA+AGG 0.449329 7:-86096527 MsaT039213.1:CDS
GAAGAGGAGATGGGCTGTTA+CGG 0.450082 7:-86099687 MsaT039213.1:CDS
AGACTTGCAAGCAGAATCAT+TGG 0.451486 7:+86096330 None:intergenic
CTTTGAATGCGAAGAGGAGA+TGG 0.451636 7:-86099697 MsaT039213.1:CDS
TCTGATTTAATAATGCTAGA+AGG 0.452942 7:+86100295 None:intergenic
ATCCCTCCCGAGAGAGGCTC+CGG 0.453624 7:+86100139 None:intergenic
TTAGCATCAAAATCATTGTA+TGG 0.455695 7:+86102031 None:intergenic
CAATAACTCTTAATAGAAAA+CGG 0.456175 7:+86099602 None:intergenic
GATGTTGGCCATTACGAAAC+CGG 0.457398 7:+86100825 None:intergenic
GCGCGGCCGGAGCCTCTCTC+GGG 0.458130 7:-86100145 MsaT039213.1:CDS
GTTCAGCAACCTCTTAATCA+AGG 0.458966 7:-86099569 MsaT039213.1:CDS
GGGATATTTGCGGACGGGAT+GGG 0.460336 7:-86100121 MsaT039213.1:CDS
TTGATCTTCTCCCAGATCCT+CGG 0.464060 7:+86096097 None:intergenic
TTGAGTGTTGAGGACTTTGA+TGG 0.469309 7:+86100714 None:intergenic
CTCCACCCCAATTTCTTCAC+AGG 0.470263 7:+86099788 None:intergenic
TTTAAAACATTGCGTCTTGA+CGG 0.470638 7:-86096417 MsaT039213.1:CDS
TTGATGGCGCTGGAGTCGTA+TGG 0.472237 7:+86100730 None:intergenic
ATTGCTTGTTCTTCAACGGC+AGG 0.474516 7:+86096237 None:intergenic
CACTACTCCGGCACCATCAC+CGG 0.474897 7:-86100790 MsaT039213.1:CDS
TAGGGGTAGTGTAGAGAGGG+TGG 0.476445 7:-86100023 MsaT039213.1:CDS
GAGGATTTCGCGGCCGGTGA+TGG 0.480465 7:+86100777 None:intergenic
TAGAATCATACTTAGTATAG+TGG 0.481589 7:+86099118 None:intergenic
AATGTTTATCCTCTACATGA+AGG 0.481652 7:-86101863 MsaT039213.1:intron
TCGGATTGGGATTGGGAGAA+GGG 0.481945 7:+86100859 None:intergenic
GAAGATATAAGTGACATATT+CGG 0.483653 7:-86101674 MsaT039213.1:CDS
TAAGCCGAGGATTTCGCGGC+CGG 0.485440 7:+86100771 None:intergenic
CCCTCTTTCTCCTCCCAAAA+CGG 0.487569 7:+86100205 None:intergenic
TTCGCGGCCGGTGATGGTGC+CGG 0.488545 7:+86100783 None:intergenic
GTTGAGGACTTTGATGGCGC+TGG 0.488869 7:+86100720 None:intergenic
CTAACAACAGCAGCATCTTA+CGG 0.489301 7:+86096463 None:intergenic
TACTAACCGTGGCACGTTGA+AGG 0.489496 7:-86099924 MsaT039213.1:CDS
CTCAAGATGCTGAGGAGTTG+AGG 0.490043 7:-86099874 MsaT039213.1:CDS
TAAGAGTTATTGGCAAAGCT+TGG 0.490157 7:-86099591 MsaT039213.1:CDS
CATGTAATTACAATATCTGT+TGG 0.491515 7:+86096750 None:intergenic
AGTCTCAGAGCTTCGAGTAC+AGG 0.493512 7:-86096312 MsaT039213.1:CDS
TTGACTACTTATGCTACATT+GGG 0.494687 7:-86099836 MsaT039213.1:CDS
TTAATGTTTGCAGCAATTCA+GGG 0.504494 7:+86096826 None:intergenic
AAAATATCTTCTTCAAAGGA+AGG 0.505516 7:+86101893 None:intergenic
ATGGATCGTGTCCACCGCAT+TGG 0.507107 7:-86096216 MsaT039213.1:CDS
CGGCGAGGTAGGTTTCGGAT+TGG 0.508795 7:+86100845 None:intergenic
GACAATGAATGCCAAACAAA+GGG 0.509108 7:-86096394 MsaT039213.1:CDS
CAATTACAAGCCGAGGATCT+GGG 0.510262 7:-86096107 MsaT039213.1:CDS
ACTGTATGATGAGGTTAAAG+AGG 0.511501 7:-86099198 MsaT039213.1:CDS
GTTGACTACTTATGCTACAT+TGG 0.511870 7:-86099837 MsaT039213.1:CDS
TTAATTAGGATGCTAAAAGA+TGG 0.512719 7:-86096807 MsaT039213.1:CDS
AGCGCTGATTCTGTAACAAC+CGG 0.513980 7:-86100409 MsaT039213.1:CDS
AACCAAAGACACTGCATTGG+TGG 0.514527 7:-86099279 MsaT039213.1:CDS
GGATTAAGCCGAGGATTTCG+CGG 0.515048 7:+86100767 None:intergenic
CTACCTCGCCGGTTTCGTAA+TGG 0.515519 7:-86100833 MsaT039213.1:CDS
AGTGGGAAGAAAAGAGGTAG+GGG 0.516027 7:-86100040 MsaT039213.1:CDS
CGCGTTCGATGTAACCGACT+TGG 0.516483 7:+86100686 None:intergenic
TAATTAGGATGCTAAAAGAT+GGG 0.517236 7:-86096806 MsaT039213.1:CDS
TCTGGTGTGCACGGCTCAGT+AGG 0.518306 7:+86096582 None:intergenic
TGATGGCGCTGGAGTCGTAT+GGG 0.518754 7:+86100731 None:intergenic
AAGTGGGAAGAAAAGAGGTA+GGG 0.519183 7:-86100041 MsaT039213.1:CDS
AGGGATATTTGCGGACGGGA+TGG 0.519906 7:-86100122 MsaT039213.1:CDS
TGAAGAAATTGGGGTGGAGG+AGG 0.522236 7:-86099784 MsaT039213.1:CDS
TCTATTCTCCTAAAACAAAA+CGG 0.522601 7:+86096043 None:intergenic
CGGCCGGAGCCTCTCTCGGG+AGG 0.523817 7:-86100142 MsaT039213.1:CDS
ATAAAATGAAAATGAAAAGT+GGG 0.525475 7:-86100057 MsaT039213.1:CDS
ATGAAAAGTGGGAAGAAAAG+AGG 0.526742 7:-86100046 MsaT039213.1:CDS
GTCGAGGAGAGGAGCGAGAG+CGG 0.527363 7:+86100654 None:intergenic
TATGAATCTGACAAGGGATA+CGG 0.528146 7:+86100569 None:intergenic
ATCACCGGCCGCGAAATCCT+CGG 0.528188 7:-86100775 MsaT039213.1:CDS
CTGTGAAGAAATTGGGGTGG+AGG 0.528357 7:-86099787 MsaT039213.1:CDS
AGCCGTGCACACCAGAAGTA+AGG 0.529401 7:-86096575 MsaT039213.1:CDS
TGTAATTACAATATCTGTTG+GGG 0.529594 7:+86096752 None:intergenic
ATCAAAGGATATCGCTGGCA+TGG 0.529770 7:-86096079 MsaT039213.1:CDS
GAAGATTTACGTGACATTGA+GGG 0.529957 7:-86101764 MsaT039213.1:CDS
TTCGTAATGGCCAACATCGT+CGG 0.530765 7:-86100820 MsaT039213.1:CDS
GACCTTACTTCTGGTGTGCA+CGG 0.530787 7:+86096573 None:intergenic
CTCCTTCTGTGATTTCGACA+TGG 0.531528 7:-86099967 MsaT039213.1:CDS
GCGTGTTTCTTTAACGGCGG+CGG 0.532351 7:+86100444 None:intergenic
CTTGGAGTGTTTGAGTGTTG+AGG 0.532776 7:+86100704 None:intergenic
TTGTTAGAGCGAGTGTTGGT+AGG 0.534364 7:+86100601 None:intergenic
TGAAGATTTACGTGACATTG+AGG 0.535279 7:-86101765 MsaT039213.1:CDS
ATCCATTGCTTGTTCTTCAA+CGG 0.535288 7:+86096233 None:intergenic
ATAGCCACGTTTAAGTCGAT+TGG 0.539880 7:+86101968 None:intergenic
CTCTTTGAAGATGAAGCTAT+CGG 0.539883 7:-86101794 MsaT039213.1:intron
TTATCAAACTAATGCGCGGC+CGG 0.540005 7:-86100158 MsaT039213.1:CDS
GTCGAAAATATCTTCTTCAA+AGG 0.542175 7:+86101889 None:intergenic
AGGTAGGGGTAGTGTAGAGA+GGG 0.545313 7:-86100026 MsaT039213.1:CDS
ATACGAAATGAAATGAACAT+TGG 0.545733 7:+86100495 None:intergenic
GTGTTTAATGCCGACGATGT+TGG 0.546373 7:+86100810 None:intergenic
GAGGTAGGGGTAGTGTAGAG+AGG 0.546579 7:-86100027 MsaT039213.1:CDS
CTTCTTTCTGTCCAATGCGG+TGG 0.546584 7:+86096205 None:intergenic
AAAGTGGGAAGAAAAGAGGT+AGG 0.547195 7:-86100042 MsaT039213.1:CDS
CATCAGTCTTGAAAGATTCA+GGG 0.547708 7:+86096616 None:intergenic
GAATGCCAAACAAAGGGCTC+AGG 0.547980 7:-86096388 MsaT039213.1:CDS
TGGCTTCGACGTGGATGATG+TGG 0.548217 7:+86100629 None:intergenic
GTTTAACGGTTCAGAAACTA+GGG 0.551674 7:+86100321 None:intergenic
GGCCGGAGCCTCTCTCGGGA+GGG 0.552185 7:-86100141 MsaT039213.1:CDS
TCAAAGGATATCGCTGGCAT+GGG 0.553941 7:-86096078 MsaT039213.1:CDS
CGTATGGGTTTAAAGGTTCG+CGG 0.555958 7:+86100746 None:intergenic
TGCCGTTGAAGAACAAGCAA+TGG 0.556188 7:-86096235 MsaT039213.1:CDS
CTTAATCAAGGAAAACAGAC+CGG 0.556797 7:-86099557 MsaT039213.1:CDS
ACCAAAGACACTGCATTGGT+GGG 0.558464 7:-86099278 MsaT039213.1:CDS
TACCTGCAATCGACTCATCC+CGG 0.558747 7:+86099538 None:intergenic
CATTACGAAACCGGCGAGGT+AGG 0.559895 7:+86100834 None:intergenic
GCAAATATCCCTCCCGAGAG+AGG 0.560537 7:+86100133 None:intergenic
GGGTTCTTGTGAGTCTTCCA+TGG 0.560574 7:+86100879 None:intergenic
ACGGGGACGCCTATTCAGAA+TGG 0.563434 7:-86099668 MsaT039213.1:CDS
GACATGGATAACTCAATTGG+AGG 0.564551 7:-86099951 MsaT039213.1:CDS
TATCGCTGGCATGGGCATTG+AGG 0.566281 7:-86096070 MsaT039213.1:CDS
CCAAACTAACCTTCATGTAG+AGG 0.568513 7:+86101854 None:intergenic
AGCGCGTGTTTCTTTAACGG+CGG 0.569465 7:+86100441 None:intergenic
TTGCTTGTTCTTCAACGGCA+GGG 0.573200 7:+86096238 None:intergenic
AAAGCTTCTTACGGAATCAA+GGG 0.574359 7:-86096526 MsaT039213.1:CDS
ATTTAATAATGCTAGAAGGA+GGG 0.574890 7:+86100299 None:intergenic
GATTTAATAATGCTAGAAGG+AGG 0.575245 7:+86100298 None:intergenic
ATGATGTGGGCGTCGAGGAG+AGG 0.576729 7:+86100643 None:intergenic
CGGGAGGGATATTTGCGGAC+GGG 0.579950 7:-86100126 MsaT039213.1:CDS
GAGGAGAGGAGCGAGAGCGG+CGG 0.582518 7:+86100657 None:intergenic
AAATATCTTCTTCAAAGGAA+GGG 0.588568 7:+86101894 None:intergenic
ATATGTATTATGGTGATAGG+AGG 0.588645 7:-86099898 MsaT039213.1:CDS
AGAAGATCAAAGGATATCGC+TGG 0.588810 7:-86096084 MsaT039213.1:CDS
ACGTTTAAATCTATGGCTAG+TGG 0.590475 7:+86101920 None:intergenic
ACGATCAAGAATGTTAATGC+GGG 0.594066 7:-86099740 MsaT039213.1:CDS
GAGAGGGAGCGCCGACAAAG+TGG 0.597466 7:+86096663 None:intergenic
AAGAAAACAATTACAAGCCG+AGG 0.602063 7:-86096114 MsaT039213.1:CDS
AGGGTGGAGAGTGAGACAAA+TGG 0.602442 7:-86100007 MsaT039213.1:CDS
GGACAATGAATGCCAAACAA+AGG 0.604051 7:-86096395 MsaT039213.1:CDS
CGGCTCCATTAAGTACACTC+TGG 0.605928 7:+86096269 None:intergenic
TGTTACAGAATCAGCGCTGA+CGG 0.605972 7:+86100414 None:intergenic
TATAAACCTTCAACGTGCCA+CGG 0.606128 7:+86099918 None:intergenic
GGCTTCGACGTGGATGATGT+GGG 0.608683 7:+86100630 None:intergenic
CAAGTCTCAACAATCTTAGG+TGG 0.610314 7:+86099251 None:intergenic
AGGATCTGGGAGAAGATCAA+AGG 0.613802 7:-86096094 MsaT039213.1:CDS
ATCCATGTCGAAATCACAGA+AGG 0.617581 7:+86099965 None:intergenic
GAATAACTCAGATTCTGAGA+GGG 0.617790 7:+86096647 None:intergenic
TTTGAATGCGAAGAGGAGAT+GGG 0.618382 7:-86099696 MsaT039213.1:CDS
GCGAAGATATGAATCTGACA+AGG 0.618949 7:+86100562 None:intergenic
CTTCTTCTTTCTGTCCAATG+CGG 0.619370 7:+86096202 None:intergenic
AAGAACCAAAGACACTGCAT+TGG 0.621297 7:-86099282 MsaT039213.1:CDS
TTAATCAAGGAAAACAGACC+GGG 0.621325 7:-86099556 MsaT039213.1:CDS
CAATCCGAAACCTACCTCGC+CGG 0.623218 7:-86100844 MsaT039213.1:CDS
AATTAGGATGCTAAAAGATG+GGG 0.623229 7:-86096805 MsaT039213.1:CDS
ATAAGTGACATATTCGGTGA+AGG 0.627026 7:-86101668 MsaT039213.1:intron
ATCAGTCTTGAAAGATTCAG+GGG 0.628464 7:+86096617 None:intergenic
ATACTCCTGTGAAGAAATTG+GGG 0.629443 7:-86099793 MsaT039213.1:CDS
GTTATTGTTAGAGCGAGTGT+TGG 0.630463 7:+86100597 None:intergenic
CTCCTGTGAAGAAATTGGGG+TGG 0.632108 7:-86099790 MsaT039213.1:CDS
TCAACGGCAGGGTTCCACCA+CGG 0.633364 7:+86096249 None:intergenic
CGTGGATGATGTGGGCGTCG+AGG 0.633689 7:+86100638 None:intergenic
CCAAAGACACTGCATTGGTG+GGG 0.634211 7:-86099277 MsaT039213.1:CDS
TCTCTCGGGAGGGATATTTG+CGG 0.634363 7:-86100131 MsaT039213.1:CDS
CAAGTCAATAACCAAAACCA+TGG 0.634398 7:+86102060 None:intergenic
TCGGGAGGGATATTTGCGGA+CGG 0.634657 7:-86100127 MsaT039213.1:CDS
TACGATCAAGAATGTTAATG+CGG 0.642076 7:-86099741 MsaT039213.1:CDS
TAGGAGGACTCAAGATGCTG+AGG 0.643252 7:-86099882 MsaT039213.1:CDS
CTACATTGGGAGCTGAGTTG+CGG 0.644145 7:-86099823 MsaT039213.1:CDS
GCGAGTGTTGGTAGGAACGA+TGG 0.644260 7:+86100609 None:intergenic
TGTACTTAATGGAGCCGTGG+TGG 0.645030 7:-86096263 MsaT039213.1:CDS
AGAGGAGATGGGCTGTTACG+GGG 0.645108 7:-86099685 MsaT039213.1:CDS
GAGTGTACTTAATGGAGCCG+TGG 0.649923 7:-86096266 MsaT039213.1:CDS
GTCGGCATTAAACACTACTC+CGG 0.651569 7:-86100802 MsaT039213.1:CDS
CTCCATTAAGTACACTCTGG+AGG 0.653720 7:+86096272 None:intergenic
AAGGTTCGCGGATTAAGCCG+AGG 0.655327 7:+86100758 None:intergenic
AACACTCAAACACTCCAAGT+CGG 0.656074 7:-86100700 MsaT039213.1:CDS
AGAATAACTCAGATTCTGAG+AGG 0.657077 7:+86096646 None:intergenic
CATGTCGAAATCACAGAAGG+AGG 0.664824 7:+86099968 None:intergenic
AGACACGACTTGAAATCCAA+AGG 0.665373 7:+86099059 None:intergenic
AGAACGTAAACTGTATGATG+AGG 0.665949 7:-86099207 MsaT039213.1:CDS
CGAAGATATGAATCTGACAA+GGG 0.668320 7:+86100563 None:intergenic
TCTTACAATCCCAATCACCA+TGG 0.669748 7:-86100896 MsaT039213.1:CDS
TAGGAACGATGGCTTCGACG+TGG 0.673914 7:+86100620 None:intergenic
TGATTGCTTTGAATGCGAAG+AGG 0.688442 7:-86099703 MsaT039213.1:CDS
TTGGAGGAACATACTAACCG+TGG 0.701328 7:-86099935 MsaT039213.1:CDS
GTAATTACAATATCTGTTGG+GGG 0.701393 7:+86096753 None:intergenic
TGGCCATTACGAAACCGGCG+AGG 0.702379 7:+86100830 None:intergenic
AACACCAATCGACTTAAACG+TGG 0.708962 7:-86101972 MsaT039213.1:CDS
CGAATTATCAAACTAATGCG+CGG 0.709330 7:-86100162 MsaT039213.1:CDS
TCTTTCTCCTCCCAAAACGG+CGG 0.713897 7:+86100208 None:intergenic
GAATGAGAAAGAGTAAACGA+AGG 0.718846 7:+86100466 None:intergenic
TCAGTCTTGAAAGATTCAGG+GGG 0.730552 7:+86096618 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 86096044 86102080 86096044 ID=MsaG039213
Chr7 mRNA 86096044 86102080 86096044 ID=MsaT039213.1;Parent=MsaG039213
Chr7 exon 86096044 86096861 86096044 ID=MsaT039213.1.exon5;Parent=MsaT039213.1
Chr7 CDS 86096044 86096861 86096044 ID=cds.MsaT039213.1;Parent=MsaT039213.1
Chr7 exon 86099036 86099330 86099036 ID=MsaT039213.1.exon4;Parent=MsaT039213.1
Chr7 CDS 86099036 86099330 86099036 ID=cds.MsaT039213.1;Parent=MsaT039213.1
Chr7 exon 86099541 86100919 86099541 ID=MsaT039213.1.exon3;Parent=MsaT039213.1
Chr7 CDS 86099541 86100919 86099541 ID=cds.MsaT039213.1;Parent=MsaT039213.1
Chr7 exon 86101669 86101806 86101669 ID=MsaT039213.1.exon2;Parent=MsaT039213.1
Chr7 CDS 86101669 86101806 86101669 ID=cds.MsaT039213.1;Parent=MsaT039213.1
Chr7 exon 86101864 86102080 86101864 ID=MsaT039213.1.exon1;Parent=MsaT039213.1
Chr7 CDS 86101864 86102080 86101864 ID=cds.MsaT039213.1;Parent=MsaT039213.1
Gene Sequence

>MsaT039213.1

ATGGTTTTGGTTATTGACTTGAATGAACCATACAATGATTTTGATGCTAATGATGGTGCATCGACACTAAACGAAGACAGAGCACTAACACCAATCGACTTAAACGTGGCTATGTCGTCCGTAAATGAGTATAGAGCTCCACTAGCCATAGATTTAAACGTGTGCCCTTCCTTTGAAGAAGATATTTTCGACTTGAATGTTTATCCTCTACATGAAGATGAAGCTATCGGAGAAGATGAAGATTTACGTGACATTGAGGGTGAATATGAATATTTTAATGACATTGGTGGAGAATATGAAGATTTAAGTGACATTCATGTTGAAGATGAAGATATAAGTGACATATTCGGTGAAGATCTTACAATCCCAATCACCATGGAAGACTCACAAGAACCCTTCTCCCAATCCCAATCCGAAACCTACCTCGCCGGTTTCGTAATGGCCAACATCGTCGGCATTAAACACTACTCCGGCACCATCACCGGCCGCGAAATCCTCGGCTTAATCCGCGAACCTTTAAACCCATACGACTCCAGCGCCATCAAAGTCCTCAACACTCAAACACTCCAAGTCGGTTACATCGAACGCGCCGTCGCCGCCGCTCTCGCTCCTCTCCTCGACGCCCACATCATCCACGTCGAAGCCATCGTTCCTACCAACACTCGCTCTAACAATAACAAATTCCGTATCCCTTGTCAGATTCATATCTTCGCTCATCAATCTGCTTTTGACGCTGTTCATGACGCTTTTAACGGTTCCAATGTTCATTTCATTTCGTATAGTGATCCTTCGTTTACTCTTTCTCATTCCGCCGCCGTTAAAGAAACACGCGCTGACACCGTCAGCGCTGATTCTGTAACAACCGGTAATAATAATAGTAAAAACCTAGATCAAATTTTCAAACTCGTTCGAGAAAACCTAGCTTCCAAAACCCTAGTTTCTGAACCGTTAAACCCTCCTTCTAGCATTATTAAATCAGAGCTTCTGCAGCACCAAAAAGAAGCACTAGGATGGCTTTATCATCGTGAAAGTGCTGATGATTTACCGCCGTTTTGGGAGGAGAAAGAGGGGAATTTTGTTAATGTGTTGACGAATTATCAAACTAATGCGCGGCCGGAGCCTCTCTCGGGAGGGATATTTGCGGACGGGATGGGATTAGGGAAGACGTTAACGTTGCTATCGTTGATTGGTTATGATAAAATGAAAATGAAAAGTGGGAAGAAAAGAGGTAGGGGTAGTGTAGAGAGGGTGGAGAGTGAGACAAATGGTACATTGATTGTTTGTCCTCCTTCTGTGATTTCGACATGGATAACTCAATTGGAGGAACATACTAACCGTGGCACGTTGAAGGTTTATATGTATTATGGTGATAGGAGGACTCAAGATGCTGAGGAGTTGAGGAAGTATGATATTGTGTTGACTACTTATGCTACATTGGGAGCTGAGTTGCGGTGTTCGGATACTCCTGTGAAGAAATTGGGGTGGAGGAGGATTGTTTTGGATGAGGCGCATACGATCAAGAATGTTAATGCGGGACAGAGTCAGGCTGTGATTGCTTTGAATGCGAAGAGGAGATGGGCTGTTACGGGGACGCCTATTCAGAATGGTTCTTATGACTTGTTTTCTCTTATGGCTTTTTTGCATTTTGAGCCGTTTTCTATTAAGAGTTATTGGCAAAGCTTGGTTCAGCAACCTCTTAATCAAGGAAAACAGACCGGGATGAGTCGATTGCAGGTTTTGATGTCGGCAATATCATTGCGAAGAACCAAAGACACTGCATTGGTGGGGCTTCCACCTAAGATTGTTGAGACTTGTCATGTTGAACTTTCATTTGAAGAACGTAAACTGTATGATGAGGTTAAAGAGGAAATAAAGTCACTTATGATGCATCATAACAGCAATGACAGACTAGTATCTAGTTATTCCACTATACTAAGTATGATTCTAAGACTTCGTCAGATCTGTGCTGATTTTTCGATGGTTCCTTTGGATTTCAAGTCGTGTCTATTTTCTTCAACTGATATTGAAGATGTTTCCAAGAACCCTGAATTGCTGCAAACATTAATTAGGATGCTAAAAGATGGGGAAGATTTTGATTGTCCAATTTGTTTATCTCCCCCAACAGATATTGTAATTACATGCTGTGCTCATATTTTCTGCCGAGAATGTATTCTGAAAACTCTTCAGCGCAGCAATTCCAGTTGTCCACTTTGTCGGCGCTCCCTCTCAGAATCTGAGTTATTCTCAGCACCCCCTGAATCTTTCAAGACTGATGATACTGATGATCCTACTGAGCCGTGCACACCAGAAGTAAGGTCATCTACCAAAATCGCTACTTTGATAAAGCTTCTTACGGAATCAAGGGATCAAAATCCAGCTACAAAATCAGTTGTATTTTCACAATTCCGTAAGATGCTGCTGTTGTTAGAAGAACCTTTAAAAGCAGCTGGCTTTAAAACATTGCGTCTTGACGGGACAATGAATGCCAAACAAAGGGCTCAGGTTATTGAACAATTTCAACTCTCAGAAGTTGATGAGCCAATGATTCTGCTTGCAAGTCTCAGAGCTTCGAGTACAGGAATAAATCTTACTGCTGCCTCCAGAGTGTACTTAATGGAGCCGTGGTGGAACCCTGCCGTTGAAGAACAAGCAATGGATCGTGTCCACCGCATTGGACAGAAAGAAGAAGTGAAGATTGTTAGACTGATTGCAAAAAACAGCATCGAAGAGAAAATACTAATGTTGCAAGAAAAGAAGAAAACAATTACAAGCCGAGGATCTGGGAGAAGATCAAAGGATATCGCTGGCATGGGCATTGAGGATCTCCGTTTTGTTTTAGGAGAATAG
Protein sequence

>MsaT039213.1

MVLVIDLNEPYNDFDANDGASTLNEDRALTPIDLNVAMSSVNEYRAPLAIDLNVCPSFEEDIFDLNVYPLHEDEAIGEDEDLRDIEGEYEYFNDIGGEYEDLSDIHVEDEDISDIFGEDLTIPITMEDSQEPFSQSQSETYLAGFVMANIVGIKHYSGTITGREILGLIREPLNPYDSSAIKVLNTQTLQVGYIERAVAAALAPLLDAHIIHVEAIVPTNTRSNNNKFRIPCQIHIFAHQSAFDAVHDAFNGSNVHFISYSDPSFTLSHSAAVKETRADTVSADSVTTGNNNSKNLDQIFKLVRENLASKTLVSEPLNPPSSIIKSELLQHQKEALGWLYHRESADDLPPFWEEKEGNFVNVLTNYQTNARPEPLSGGIFADGMGLGKTLTLLSLIGYDKMKMKSGKKRGRGSVERVESETNGTLIVCPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEELRKYDIVLTTYATLGAELRCSDTPVKKLGWRRIVLDEAHTIKNVNAGQSQAVIALNAKRRWAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYWQSLVQQPLNQGKQTGMSRLQVLMSAISLRRTKDTALVGLPPKIVETCHVELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTILSMILRLRQICADFSMVPLDFKSCLFSSTDIEDVSKNPELLQTLIRMLKDGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSSCPLCRRSLSESELFSAPPESFKTDDTDDPTEPCTPEVRSSTKIATLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMNAKQRAQVIEQFQLSEVDEPMILLASLRASSTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKKTITSRGSGRRSKDIAGMGIEDLRFVLGE*