AlfalfaGEDB | MsaG039448

M. sativa ssp. caerulea / MsaG039448

KEGG: -
GO: -
PFAM: PF02536.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039448	XP_039684024.1	83.826	575	44	6	1	530	1	571	0.0	922

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039448	sp\|Q9M219\|MTEFH_ARATH	25.451	554	337	18	26	520	10	546	1.48e-40	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039448	tr\|G7KVB8\|G7KVB8_MEDTR	83.826	575	44	6	1	530	1	571	0.0	922

TFs/TRs:

Gene ID	Type	Classification
MsaG039448	TR	mTERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000083	MsaG039448	0.801828	1.256170e-48	1.770154e-46
MsaG000140	MsaG039448	0.801470	1.486763e-48	2.078039e-46
MsaG000643	MsaG039448	0.807575	8.035959e-50	1.294421e-47
MsaG000712	MsaG039448	0.810412	1.997612e-50	3.445924e-48
MsaG001192	MsaG039448	0.822396	4.267882e-53	1.000344e-50
MsaG001514	MsaG039448	0.816268	1.047615e-51	2.091338e-49
MsaG001826	MsaG039448	0.806717	1.218254e-49	1.922922e-47
MsaG001827	MsaG039448	0.825403	8.484811e-54	2.158089e-51
MsaG002121	MsaG039448	0.808307	5.622901e-50	9.218242e-48
MsaG002414	MsaG039448	0.813479	4.321583e-51	8.040725e-49
MsaG002681	MsaG039448	0.829811	7.500957e-55	2.159110e-52
MsaG002691	MsaG039448	0.802580	8.812124e-49	1.263282e-46
MsaG002878	MsaG039448	0.827877	2.193574e-54	5.977897e-52
MsaG002906	MsaG039448	0.827405	2.843212e-54	7.646455e-52
MsaG002929	MsaG039448	0.817266	6.269414e-52	1.284128e-49
MsaG003105	MsaG039448	0.817982	4.331623e-52	9.037067e-50
MsaG003684	MsaG039448	0.822660	3.708281e-53	8.753706e-51
MsaG003721	MsaG039448	0.812572	6.814825e-51	1.239620e-48
MsaG003792	MsaG039448	0.809942	2.519655e-50	4.296789e-48
MsaG003810	MsaG039448	0.817804	4.748857e-52	9.862149e-50
MsaG003882	MsaG039448	0.806834	1.151344e-49	1.822240e-47
MsaG003915	MsaG039448	0.800724	2.108238e-48	2.897551e-46
MsaG004157	MsaG039448	0.810209	2.208996e-50	3.791503e-48
MsaG004277	MsaG039448	0.814364	2.763189e-51	5.256766e-49
MsaG004428	MsaG039448	0.801184	1.699895e-48	2.360600e-46
MsaG005035	MsaG039448	0.817159	6.627393e-52	1.353675e-49
MsaG005138	MsaG039448	0.817612	5.244206e-52	1.083671e-49
MsaG005235	MsaG039448	0.820706	1.044598e-52	2.340608e-50
MsaG005246	MsaG039448	0.807467	8.469440e-50	1.360739e-47
MsaG005368	MsaG039448	0.801746	1.305889e-48	1.836741e-46
MsaG005560	MsaG039448	0.809560	3.042250e-50	5.140530e-48
MsaG005564	MsaG039448	0.823893	1.916996e-53	4.678797e-51
MsaG005626	MsaG039448	0.815083	1.917664e-51	3.714751e-49
MsaG005775	MsaG039448	0.814999	2.002275e-51	3.870479e-49
MsaG005866	MsaG039448	0.802530	9.022290e-49	1.291937e-46
MsaG006145	MsaG039448	0.817924	4.462853e-52	9.296973e-50
MsaG006178	MsaG039448	0.818809	2.819040e-52	6.008718e-50
MsaG006517	MsaG039448	0.815945	1.235868e-51	2.446960e-49
MsaG006576	MsaG039448	0.810815	1.636433e-50	2.850641e-48
MsaG006548	MsaG039448	0.803575	5.499650e-49	8.066760e-47
MsaG006633	MsaG039448	0.824982	1.065537e-53	2.679109e-51
MsaG006710	MsaG039448	0.804931	2.879115e-49	4.357963e-47
MsaG006759	MsaG039448	0.809096	3.820513e-50	6.383755e-48
MsaG006788	MsaG039448	0.829800	7.549375e-55	2.172357e-52
MsaG007033	MsaG039448	0.800141	2.767618e-48	3.753886e-46
MsaG007291	MsaG039448	0.807579	8.017422e-50	1.291571e-47
MsaG008033	MsaG039448	0.802639	8.570304e-49	1.230275e-46
MsaG008442	MsaG039448	0.809651	2.909137e-50	4.926270e-48
MsaG008430	MsaG039448	0.806993	1.065666e-49	1.693021e-47
MsaG008682	MsaG039448	0.820507	1.159763e-52	2.585161e-50
MsaG008712	MsaG039448	0.800454	2.391611e-48	3.266994e-46
MsaG008815	MsaG039448	0.838620	4.750152e-57	1.776052e-54
MsaG008888	MsaG039448	0.818530	3.259915e-52	6.898046e-50
MsaG008877	MsaG039448	0.817848	4.643411e-52	9.653864e-50
MsaG009057	MsaG039448	0.822697	3.636277e-53	8.592370e-51
MsaG009178	MsaG039448	0.851070	2.151905e-60	1.210134e-57
MsaG009193	MsaG039448	0.818004	4.281709e-52	8.938228e-50
MsaG009532	MsaG039448	0.811216	1.341042e-50	2.359128e-48
MsaG009749	MsaG039448	0.809218	3.598498e-50	6.030079e-48
MsaG009765	MsaG039448	0.814735	2.289343e-51	4.395947e-49
MsaG009852	MsaG039448	0.804776	3.100472e-49	4.676116e-47
MsaG009911	MsaG039448	0.800391	2.463009e-48	3.359739e-46
MsaG009926	MsaG039448	0.802123	1.093273e-48	1.550907e-46
MsaG010075	MsaG039448	0.803583	5.478592e-49	8.037374e-47
MsaG010274	MsaG039448	0.811103	1.418674e-50	2.488798e-48
MsaG010331	MsaG039448	0.816566	8.991218e-52	1.808605e-49
MsaG010594	MsaG039448	0.802700	8.326572e-49	1.196917e-46
MsaG010887	MsaG039448	0.802450	9.368639e-49	1.339087e-46
MsaG011213	MsaG039448	0.804385	3.738442e-49	5.587492e-47
MsaG011257	MsaG039448	0.812966	5.594364e-51	1.027618e-48
MsaG011335	MsaG039448	0.800138	2.772349e-48	3.759980e-46
MsaG011341	MsaG039448	0.806187	1.574018e-49	2.453566e-47
MsaG011467	MsaG039448	0.801901	1.213863e-48	1.713383e-46
MsaG011559	MsaG039448	0.835213	3.486939e-56	1.175417e-53
MsaG011764	MsaG039448	0.818801	2.832006e-52	6.035015e-50
MsaG011825	MsaG039448	0.814194	3.012143e-51	5.705768e-49
MsaG011796	MsaG039448	0.811902	9.526189e-51	1.704315e-48
MsaG011996	MsaG039448	0.809219	3.596624e-50	6.027090e-48
MsaG012130	MsaG039448	0.820480	1.176462e-52	2.620549e-50
MsaG012188	MsaG039448	0.803082	6.949410e-49	1.007790e-46
MsaG012354	MsaG039448	0.821568	6.626281e-53	1.519075e-50
MsaG012492	MsaG039448	0.808853	4.304362e-50	7.150252e-48
MsaG012754	MsaG039448	0.810617	1.805435e-50	3.129893e-48
MsaG013155	MsaG039448	0.843872	2.003584e-58	8.847053e-56
MsaG013156	MsaG039448	0.867971	1.863639e-65	1.985379e-62
MsaG013182	MsaG039448	0.814403	2.709507e-51	5.159595e-49
MsaG013327	MsaG039448	0.802502	9.143965e-49	1.308503e-46
MsaG013901	MsaG039448	0.815065	1.935370e-51	3.747414e-49
MsaG013970	MsaG039448	0.820682	1.057370e-52	2.367806e-50
MsaG014062	MsaG039448	0.838109	6.423721e-57	2.363885e-54
MsaG014149	MsaG039448	0.811993	9.104585e-51	1.632499e-48
MsaG014369	MsaG039448	0.800079	2.849722e-48	3.859865e-46
MsaG014494	MsaG039448	0.804100	4.282913e-49	6.359347e-47
MsaG014508	MsaG039448	0.837374	9.899372e-57	3.561651e-54
MsaG014534	MsaG039448	0.824978	1.067877e-53	2.684657e-51
MsaG015166	MsaG039448	0.808261	5.752122e-50	9.419770e-48
MsaG015441	MsaG039448	0.803747	5.066933e-49	7.461972e-47
MsaG015564	MsaG039448	0.806341	1.461383e-49	2.286322e-47
MsaG015846	MsaG039448	0.812190	8.252096e-51	1.486817e-48
MsaG015930	MsaG039448	0.803152	6.722096e-49	9.763962e-47
MsaG016121	MsaG039448	0.809774	2.737346e-50	4.649232e-48
MsaG016250	MsaG039448	0.814258	2.915259e-51	5.531245e-49
MsaG016366	MsaG039448	0.809794	2.711108e-50	4.606922e-48
MsaG016584	MsaG039448	0.800400	2.453033e-48	3.346817e-46
MsaG016721	MsaG039448	0.801410	1.529012e-48	2.134221e-46
MsaG017063	MsaG039448	0.800221	2.666934e-48	3.623786e-46
MsaG017271	MsaG039448	0.802248	1.030978e-48	1.466721e-46
MsaG017281	MsaG039448	0.814604	2.446253e-51	4.681722e-49
MsaG018069	MsaG039448	0.801782	1.283995e-48	1.807380e-46
MsaG018150	MsaG039448	0.802239	1.035274e-48	1.472529e-46
MsaG018256	MsaG039448	0.807462	8.489010e-50	1.363747e-47
MsaG018355	MsaG039448	0.846033	5.263820e-59	2.495781e-56
MsaG018406	MsaG039448	0.808600	4.872393e-50	8.044360e-48
MsaG018431	MsaG039448	0.839523	2.778426e-57	1.068468e-54
MsaG018488	MsaG039448	0.828676	1.410172e-54	3.930085e-52
MsaG018502	MsaG039448	0.819515	1.951435e-52	4.237119e-50
MsaG018613	MsaG039448	0.803275	6.341647e-49	9.237641e-47
MsaG018780	MsaG039448	0.814812	2.201964e-51	4.236455e-49
MsaG018876	MsaG039448	0.800797	2.037888e-48	2.805441e-46
MsaG019473	MsaG039448	0.806538	1.328340e-49	2.087910e-47
MsaG019479	MsaG039448	0.804182	4.118836e-49	6.127099e-47
MsaG019540	MsaG039448	0.801006	1.848074e-48	2.556059e-46
MsaG019596	MsaG039448	0.802881	7.643041e-49	1.103243e-46
MsaG019716	MsaG039448	0.800447	2.400187e-48	3.278155e-46
MsaG019772	MsaG039448	0.816384	9.871517e-52	1.976444e-49
MsaG019783	MsaG039448	0.809577	3.016967e-50	5.099953e-48
MsaG020289	MsaG039448	0.823681	2.147517e-53	5.211759e-51
MsaG020449	MsaG039448	0.824000	1.809515e-53	4.429463e-51
MsaG020650	MsaG039448	0.808090	6.253119e-50	1.019818e-47
MsaG020697	MsaG039448	0.810401	2.008253e-50	3.463353e-48
MsaG020775	MsaG039448	0.802331	9.911913e-49	1.412888e-46
MsaG020862	MsaG039448	0.801984	1.167482e-48	1.650964e-46
MsaG021032	MsaG039448	0.809995	2.455233e-50	4.192342e-48
MsaG021085	MsaG039448	0.806740	1.204724e-49	1.902624e-47
MsaG021273	MsaG039448	0.802724	8.233134e-49	1.184127e-46
MsaG021293	MsaG039448	0.800266	2.611907e-48	3.552614e-46
MsaG021379	MsaG039448	0.828429	1.616659e-54	4.474743e-52
MsaG021484	MsaG039448	0.817862	4.609498e-52	9.586856e-50
MsaG021781	MsaG039448	0.825128	9.847066e-54	2.485749e-51
MsaG021783	MsaG039448	0.844628	1.258404e-58	5.696477e-56
MsaG021836	MsaG039448	0.837683	8.254383e-57	2.997979e-54
MsaG022048	MsaG039448	0.811517	1.154470e-50	2.045937e-48
MsaG022095	MsaG039448	0.823703	2.122645e-53	5.154471e-51
MsaG022548	MsaG039448	0.815081	1.919650e-51	3.718410e-49
MsaG022609	MsaG039448	0.845173	8.983902e-59	4.139788e-56
MsaG022706	MsaG039448	0.811050	1.456439e-50	2.551739e-48
MsaG022981	MsaG039448	0.829873	7.249315e-55	2.090455e-52
MsaG023246	MsaG039448	0.808053	6.364486e-50	1.037071e-47
MsaG023225	MsaG039448	0.801693	1.338416e-48	1.880234e-46
MsaG023230	MsaG039448	0.835936	2.291874e-56	7.895431e-54
MsaG023590	MsaG039448	0.810025	2.418860e-50	4.133183e-48
MsaG023849	MsaG039448	0.801024	1.832212e-48	2.535157e-46
MsaG023896	MsaG039448	0.802483	9.223949e-49	1.319386e-46
MsaG024313	MsaG039448	0.812056	8.821554e-51	1.584158e-48
MsaG024417	MsaG039448	0.803861	4.800383e-49	7.087884e-47
MsaG024454	MsaG039448	0.820910	9.380602e-53	2.113422e-50
MsaG024535	MsaG039448	0.805294	2.419313e-49	3.692906e-47
MsaG024752	MsaG039448	0.816658	8.572821e-52	1.728504e-49
MsaG025276	MsaG039448	0.828867	1.268349e-54	3.553871e-52
MsaG025330	MsaG039448	0.815220	1.788779e-51	3.477223e-49
MsaG025331	MsaG039448	0.820729	1.031871e-52	2.313547e-50
MsaG025489	MsaG039448	0.825357	8.696217e-54	2.209150e-51
MsaG025500	MsaG039448	0.803059	7.026244e-49	1.018378e-46
MsaG025584	MsaG039448	0.822360	4.351994e-53	1.019082e-50
MsaG025776	MsaG039448	0.814316	2.831135e-51	5.379388e-49
MsaG025908	MsaG039448	0.808303	5.633575e-50	9.234909e-48
MsaG026292	MsaG039448	0.802756	8.110249e-49	1.167312e-46
MsaG026465	MsaG039448	0.835062	3.804831e-56	1.276866e-53
MsaG026614	MsaG039448	0.818508	3.297130e-52	6.972862e-50
MsaG026937	MsaG039448	0.821018	8.861924e-53	2.002344e-50
MsaG026897	MsaG039448	0.820097	1.438317e-52	3.171641e-50
MsaG026901	MsaG039448	0.807923	6.783584e-50	1.101927e-47
MsaG027323	MsaG039448	0.804611	3.355767e-49	5.041713e-47
MsaG027588	MsaG039448	0.800207	2.683743e-48	3.645494e-46
MsaG027690	MsaG039448	0.828489	1.564154e-54	4.336672e-52
MsaG027991	MsaG039448	0.819093	2.432013e-52	5.222646e-50
MsaG028072	MsaG039448	0.800798	2.037242e-48	2.804607e-46
MsaG028204	MsaG039448	0.801885	1.222808e-48	1.725391e-46
MsaG028303	MsaG039448	0.825931	6.367505e-54	1.643606e-51
MsaG028306	MsaG039448	0.826026	6.046929e-54	1.564934e-51
MsaG028308	MsaG039448	0.838143	6.295397e-57	2.319117e-54
MsaG028370	MsaG039448	0.828102	1.936679e-54	5.311391e-52
MsaG028328	MsaG039448	0.807869	6.963054e-50	1.129607e-47
MsaG028345	MsaG039448	0.801184	1.699710e-48	2.360371e-46
MsaG028417	MsaG039448	0.836212	1.952584e-56	6.782595e-54
MsaG028423	MsaG039448	0.802536	8.998238e-49	1.288672e-46
MsaG028603	MsaG039448	0.826136	5.695179e-54	1.478443e-51
MsaG028604	MsaG039448	0.836118	2.062121e-56	7.143112e-54
MsaG028742	MsaG039448	0.813894	3.504090e-51	6.588136e-49
MsaG028760	MsaG039448	0.805362	2.341064e-49	3.579182e-47
MsaG028821	MsaG039448	0.823997	1.812242e-53	4.435796e-51
MsaG028999	MsaG039448	0.800149	2.757223e-48	3.740499e-46
MsaG029083	MsaG039448	0.809221	3.593031e-50	6.021396e-48
MsaG029311	MsaG039448	0.843684	2.248273e-58	9.868781e-56
MsaG029341	MsaG039448	0.813981	3.354337e-51	6.320231e-49
MsaG029613	MsaG039448	0.807180	9.733844e-50	1.553267e-47
MsaG029781	MsaG039448	0.808005	6.517522e-50	1.060778e-47
MsaG029894	MsaG039448	0.812321	7.729034e-51	1.397095e-48
MsaG030194	MsaG039448	0.800432	2.416554e-48	3.299421e-46
MsaG030265	MsaG039448	0.842477	4.696909e-58	1.983468e-55
MsaG030237	MsaG039448	0.807047	1.038338e-49	1.651689e-47
MsaG030578	MsaG039448	0.802070	1.121070e-48	1.588457e-46
MsaG030605	MsaG039448	0.812780	6.139258e-51	1.122490e-48
MsaG031017	MsaG039448	0.805330	2.377952e-49	3.632827e-47
MsaG032196	MsaG039448	0.808090	6.250367e-50	1.019389e-47
MsaG032298	MsaG039448	0.801113	1.757737e-48	2.436986e-46
MsaG032726	MsaG039448	0.803958	4.582836e-49	6.782064e-47
MsaG032764	MsaG039448	0.800415	2.435933e-48	3.324592e-46
MsaG032860	MsaG039448	0.854976	1.661869e-61	1.072628e-58
MsaG032914	MsaG039448	0.826292	5.229584e-54	1.363420e-51
MsaG033165	MsaG039448	0.801689	1.341345e-48	1.884145e-46
MsaG034005	MsaG039448	0.800287	2.585497e-48	3.518398e-46
MsaG034107	MsaG039448	0.809953	2.505677e-50	4.274176e-48
MsaG034145	MsaG039448	0.806981	1.072097e-49	1.702735e-47
MsaG034839	MsaG039448	0.808797	4.423550e-50	7.338246e-48
MsaG035173	MsaG039448	0.802693	8.355627e-49	1.200902e-46
MsaG035165	MsaG039448	0.804613	3.352895e-49	5.037604e-47
MsaG035219	MsaG039448	0.813870	3.547321e-51	6.665410e-49
MsaG035456	MsaG039448	0.800870	1.969858e-48	2.716132e-46
MsaG035731	MsaG039448	0.821215	7.982844e-53	1.813121e-50
MsaG035940	MsaG039448	0.806399	1.421133e-49	2.226368e-47
MsaG036421	MsaG039448	0.821353	7.424594e-53	1.692421e-50
MsaG036428	MsaG039448	0.801922	1.201908e-48	1.697281e-46
MsaG037736	MsaG039448	0.820849	9.687689e-53	2.178961e-50
MsaG037868	MsaG039448	0.849843	4.739995e-60	2.555223e-57
MsaG038166	MsaG039448	0.806095	1.645544e-49	2.559445e-47
MsaG038466	MsaG039448	0.805978	1.740864e-49	2.700155e-47
MsaG038499	MsaG039448	0.810518	1.895858e-50	3.278751e-48
MsaG038828	MsaG039448	0.823994	1.815667e-53	4.443721e-51
MsaG038991	MsaG039448	0.850857	2.469892e-60	1.378768e-57
MsaG039106	MsaG039448	0.813673	3.917686e-51	7.324918e-49
MsaG038999	MsaG039448	0.808789	4.440909e-50	7.365653e-48
MsaG039175	MsaG039448	0.800523	2.316639e-48	3.169429e-46
MsaG039397	MsaG039448	0.814176	3.038879e-51	5.753907e-49
MsaG039448	MsaG039760	0.800058	2.877642e-48	3.895907e-46
MsaG039448	MsaG040019	0.808673	4.700949e-50	7.775430e-48
MsaG039448	MsaG040162	0.813504	4.266741e-51	7.943652e-49
MsaG039448	MsaG040249	0.812869	5.871542e-51	1.075938e-48
MsaG039448	MsaG040266	0.804073	4.338892e-49	6.438395e-47
MsaG039448	MsaG040310	0.805252	2.468818e-49	3.764811e-47
MsaG039448	MsaG040354	0.810590	1.829403e-50	3.169341e-48
MsaG039448	MsaG040545	0.831844	2.394585e-55	7.309328e-53
MsaG039448	MsaG040572	0.800016	2.933995e-48	3.968499e-46
MsaG039448	MsaG040673	0.806773	1.185768e-49	1.874130e-47
MsaG039448	MsaG041010	0.807416	8.679514e-50	1.392824e-47
MsaG039448	MsaG040950	0.816741	8.217450e-52	1.660429e-49
MsaG039448	MsaG041066	0.803806	4.926399e-49	7.264783e-47
MsaG039448	MsaG041135	0.824448	1.422167e-53	3.523952e-51
MsaG039448	MsaG041437	0.803201	6.566542e-49	9.548993e-47
MsaG039448	MsaG041434	0.816409	9.742451e-52	1.951859e-49
MsaG039448	MsaG041495	0.805486	2.206284e-49	3.382749e-47
MsaG039448	MsaG041793	0.809046	3.915329e-50	6.534318e-48
MsaG039448	MsaG042050	0.831992	2.202385e-55	6.751451e-53
MsaG039448	MsaG042575	0.808574	4.935869e-50	8.144147e-48
MsaG039448	MsaG042732	0.803415	5.934217e-49	8.672006e-47
MsaG039448	MsaG042799	0.846303	4.448774e-59	2.128329e-56
MsaG039448	MsaG043390	0.826448	4.802290e-54	1.257561e-51
MsaG039448	MsaG043499	0.817494	5.576234e-52	1.148811e-49
MsaG039448	MsaG044119	0.827713	2.401126e-54	6.513480e-52
MsaG039448	MsaG044189	0.829018	1.166749e-54	3.283109e-52
MsaG039448	MsaG044305	0.802161	1.073755e-48	1.524561e-46
MsaG039448	MsaG044311	0.801561	1.424308e-48	1.994837e-46
MsaG039448	MsaG044313	0.833655	8.542305e-56	2.749121e-53
MsaG039448	MsaG044532	0.829404	9.414059e-55	2.678293e-52
MsaG039448	MsaG044566	0.804016	4.458891e-49	6.607558e-47
MsaG039448	MsaG044946	0.835873	2.377239e-56	8.173866e-54
MsaG039448	MsaG044960	0.810730	1.707099e-50	2.967542e-48
MsaG039448	MsaG045212	0.808764	4.496160e-50	7.452848e-48
MsaG039448	MsaG045303	0.822532	3.970705e-53	9.340850e-51
MsaG039448	MsaG045314	0.853910	3.368375e-61	2.092993e-58
MsaG039448	MsaG045958	0.817138	6.699911e-52	1.367756e-49
MsaG039448	MsaG046084	0.800233	2.651793e-48	3.604235e-46
MsaG039448	MsaG046281	0.813569	4.129000e-51	7.699959e-49
MsaG039448	MsaG046289	0.800412	2.439791e-48	3.329622e-46
MsaG039448	MsaG047166	0.800031	2.914277e-48	3.943031e-46
MsaG039448	MsaG001943	0.801790	1.279188e-48	1.800958e-46
MsaG039448	MsaG004516	0.815967	1.221803e-51	2.420476e-49
MsaG039448	MsaG007532	0.809595	2.989769e-50	5.056022e-48
MsaG039448	MsaG008820	0.800470	2.374466e-48	3.244668e-46
MsaG039448	MsaG009083	0.800110	2.808905e-48	3.807181e-46
MsaG039448	MsaG008314	0.811301	1.285605e-50	2.266349e-48
MsaG039448	MsaG008728	0.807270	9.317576e-50	1.489983e-47
MsaG039448	MsaG009150	0.823137	2.874819e-53	6.874308e-51
MsaG039448	MsaG007436	0.831927	2.284082e-55	6.988930e-53
MsaG039448	MsaG013410	0.806989	1.068196e-49	1.696869e-47
MsaG039448	MsaG011818	0.813180	5.023097e-51	9.276385e-49
MsaG039448	MsaG012254	0.841928	6.555136e-58	2.719876e-55
MsaG039448	MsaG013067	0.822906	3.253020e-53	7.730118e-51
MsaG039448	MsaG022818	0.829173	1.070151e-54	3.024443e-52
MsaG039448	MsaG019389	0.804542	3.468594e-49	5.203033e-47
MsaG039448	MsaG018949	0.804103	4.277929e-49	6.352323e-47
MsaG039448	MsaG019154	0.856045	8.134482e-62	5.458129e-59
MsaG039448	MsaG020214	0.817835	4.673662e-52	9.713760e-50
MsaG039448	MsaG019742	0.809897	2.576093e-50	4.388347e-48
MsaG039448	MsaG024064	0.841006	1.143726e-57	4.608207e-55
MsaG039448	MsaG024920	0.818040	4.204216e-52	8.784194e-50
MsaG039448	MsaG027496	0.808979	4.046932e-50	6.742929e-48
MsaG039448	MsaG028769	0.816727	8.277147e-52	1.671867e-49
MsaG039448	MsaG025429	0.801306	1.605309e-48	2.235432e-46
MsaG039448	MsaG033142	0.801415	1.525608e-48	2.129713e-46
MsaG039448	MsaG032519	0.811888	9.594849e-51	1.715991e-48
MsaG039448	MsaG033056	0.818972	2.589947e-52	5.544223e-50
MsaG039448	MsaG034192	0.803309	6.239753e-49	9.096268e-47
MsaG039448	MsaG033413	0.808882	4.243231e-50	7.053720e-48
MsaG039448	MsaG034578	0.801647	1.367955e-48	1.919723e-46
MsaG039448	MsaG033779	0.800719	2.113153e-48	2.903981e-46
MsaG039448	MsaG036708	0.812562	6.849652e-51	1.245635e-48
MsaG039448	MsaG039944	0.816517	9.219907e-52	1.852255e-49
MsaG039448	MsaG042682	0.801481	1.478742e-48	2.067358e-46
MsaG039448	MsaG044505	0.812736	6.278735e-51	1.146718e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039448	MtrunA17_Chr7g0258521	85.472	530	18	3	1	530	1	471	0.0	874
MsaG039448	MtrunA17_Chr5g0438661	34.120	551	299	11	25	522	72	611	1.67e-89	287
MsaG039448	MtrunA17_Chr8g0335121	35.079	191	116	3	33	221	22	206	6.19e-23	102
MsaG039448	MtrunA17_Chr8g0335121	26.543	162	116	3	361	520	394	554	9.82e-15	77.0
MsaG039448	MtrunA17_Chr7g0249711	30.208	192	131	2	27	217	31	220	8.04e-19	89.7
MsaG039448	MtrunA17_Chr7g0249711	30.303	165	109	4	361	520	411	574	1.10e-15	80.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039448	AT4G19650.2	36.641	524	271	10	48	523	79	589	1.86e-110	341
MsaG039448	AT5G06810.1	35.614	570	289	13	20	523	23	580	4.27e-110	340
MsaG039448	AT5G06811.1	38.287	572	267	16	20	523	23	576	9.72e-106	328
MsaG039448	AT4G19650.1	35.887	496	257	10	76	523	90	572	1.92e-99	312
MsaG039448	AT5G45113.1	31.294	425	228	9	149	523	1	411	6.17e-61	206
MsaG039448	AT3G60400.1	25.451	554	337	18	26	520	10	546	1.51e-41	157

Find 103 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGATGAGGTTTCTTGTAAT+TGG	0.139207	7:-89158326	MsaT039448.1:CDS
AGAAATGGATTGGGCGTTTA+AGG	0.166970	7:-89157775	MsaT039448.1:CDS
CTTAACTCTTGGAGATTTAT+AGG	0.169215	7:+89157548	None:intergenic
AAGGGTTCAAATTCGTTAAT+AGG	0.178407	7:+89158732	None:intergenic
TGCAGCTTGGGCTTCTTTAA+TGG	0.216279	7:+89158917	None:intergenic
TGCTGTAAGTCCAGGGATTC+TGG	0.230492	7:-89158457	MsaT039448.1:CDS
ATCCGTCTGGCCTTCAAGTT+TGG	0.231486	7:-89157407	MsaT039448.1:CDS
CAAACCCAAACTCTCGAAAA+AGG	0.236170	7:+89158713	None:intergenic
GGATGAGGTTTCTTGTAATT+GGG	0.245427	7:-89158325	MsaT039448.1:CDS
TGGTGTTCCTCGATCCAAAA+TGG	0.255150	7:-89158595	MsaT039448.1:CDS
TAAATTTGAAAATGGGGTTT+TGG	0.276379	7:-89158541	MsaT039448.1:CDS
GATTAAGGCTTATGAAGATT+TGG	0.277999	7:-89158511	MsaT039448.1:CDS
GAAATGAAGAACTGGGTTCT+TGG	0.309862	7:-89157903	MsaT039448.1:CDS
ATTAAGGCTTATGAAGATTT+GGG	0.321396	7:-89158510	MsaT039448.1:CDS
AGGTAAGGGAGCTGAGCTTC+AGG	0.325160	7:-89157745	MsaT039448.1:CDS
TTAAGCCTATGGTTGGCTTA+AGG	0.351833	7:-89157872	MsaT039448.1:CDS
ATCCTCTTGAAATGAAGAAC+TGG	0.352452	7:-89157911	MsaT039448.1:CDS
TTAGGTTGTCAATGTATAAC+TGG	0.352925	7:-89157524	MsaT039448.1:CDS
TAAGCCTATGGTTGGCTTAA+GGG	0.353016	7:-89157871	MsaT039448.1:CDS
GTTTAGAGAGGGTTTAAGAT+TGG	0.359706	7:+89159010	None:intergenic
TCCGTCTGGCCTTCAAGTTT+GGG	0.365084	7:-89157406	MsaT039448.1:CDS
ATTATCTGTGCATGCGATAA+TGG	0.370221	7:+89157458	None:intergenic
AGGGTTCAAATTCGTTAATA+GGG	0.372587	7:+89158733	None:intergenic
GCAACTCTTCCCAAACTTGA+AGG	0.394707	7:+89157397	None:intergenic
TACCACAGTCTGTGTAACTA+TGG	0.396798	7:-89158615	MsaT039448.1:CDS
ATATTCTAACAATGCAGCTT+GGG	0.419910	7:+89158905	None:intergenic
ATTGAGTATCTTGTAAAGAA+AGG	0.421238	7:-89157612	MsaT039448.1:CDS
GAGGAAAGACACTCGATGAT+TGG	0.427453	7:-89158197	MsaT039448.1:CDS
GACCACGGGGCTGTGAATCC+CGG	0.428840	7:-89157495	MsaT039448.1:CDS
GGTGTTCCTCGATCCAAAAT+GGG	0.437198	7:-89158594	MsaT039448.1:CDS
TTCTTAATCAGAACACAGAT+AGG	0.440115	7:-89157647	MsaT039448.1:CDS
TTCGCTGTGTTGTAAAATCT+AGG	0.443690	7:+89158987	None:intergenic
TATGGTTGGCTTAAGGGATC+TGG	0.446200	7:-89157865	MsaT039448.1:CDS
GATGAGGTTTCTTGTAATTG+GGG	0.448648	7:-89158324	MsaT039448.1:CDS
TGTGGAAAACACGAAAGAAA+TGG	0.448745	7:-89157790	MsaT039448.1:CDS
CTTGTTGCGCTTAGGTTATG+TGG	0.449939	7:-89157808	MsaT039448.1:CDS
TTGTGCTTGCTTTCGAATGT+TGG	0.450865	7:-89158285	MsaT039448.1:CDS
GTTTAAGGCGTTCAGAGGTA+AGG	0.457273	7:-89157760	MsaT039448.1:CDS
TGTTAATGTTGAATTTGTTA+AGG	0.462584	7:-89158427	MsaT039448.1:CDS
GTTGCTTGAATGTAGGTAAG+AGG	0.469865	7:-89157959	MsaT039448.1:intron
TCGCTGTGTTGTAAAATCTA+GGG	0.474371	7:+89158988	None:intergenic
CGAGAAACAAGAGGGCAATC+TGG	0.474907	7:+89158144	None:intergenic
TATGTAAAACGCCATCCGTC+TGG	0.479613	7:-89157420	MsaT039448.1:CDS
GACAACCTAAGCTTAACTCT+TGG	0.480332	7:+89157537	None:intergenic
AATCTCCAAGAGTTAAGCTT+AGG	0.484339	7:-89157542	MsaT039448.1:CDS
GTAAAATCTAGGGTTTAGAG+AGG	0.484384	7:+89158998	None:intergenic
AAAACACGAAAGAAATGGAT+TGG	0.486098	7:-89157785	MsaT039448.1:CDS
GATATTCTAACAATGCAGCT+TGG	0.491273	7:+89158904	None:intergenic
ACAGAGTTCTTGTTGCGCTT+AGG	0.497883	7:-89157816	MsaT039448.1:CDS
TTGATAGTGGTTGGATTCAG+TGG	0.501005	7:-89158356	MsaT039448.1:CDS
ACCACGGGGCTGTGAATCCC+GGG	0.505110	7:-89157494	MsaT039448.1:CDS
TGGAATAAGAGTTAAGCCTA+TGG	0.513478	7:-89157883	MsaT039448.1:CDS
ACCCAGTTCTTCATTTCAAG+AGG	0.514113	7:+89157909	None:intergenic
TTGAAGAATATTGTTGCAAA+GGG	0.516097	7:-89158393	MsaT039448.1:CDS
GATTTATAGGAAAGATATGA+TGG	0.516794	7:+89157561	None:intergenic
TGGTAATTCGCCATCAAAAG+AGG	0.520777	7:+89158633	None:intergenic
AATGGTGCTCAAAGCAAGCC+CGG	0.524340	7:+89157476	None:intergenic
ATTGTTGCAAAGGGTGGTGA+TGG	0.524388	7:-89158384	MsaT039448.1:CDS
AGAAATCGATTAACACGAAA+CGG	0.527963	7:-89158782	MsaT039448.1:CDS
TGGCTTAAGGGATCTGGAAG+AGG	0.530600	7:-89157859	MsaT039448.1:CDS
AAACACGAAAGAAATGGATT+GGG	0.533185	7:-89157784	MsaT039448.1:CDS
GAAGAGGAGAAATCGAGGGT+GGG	0.535364	7:-89157843	MsaT039448.1:CDS
ACATCACCAACCAGAATCCC+TGG	0.536336	7:+89158447	None:intergenic
ACTGCAAGCTTCTTGTGGAA+TGG	0.539414	7:+89158880	None:intergenic
CGAGTTTCCACAGATTTCGA+TGG	0.543091	7:-89158123	MsaT039448.1:CDS
CAGTTGGCTGAGATTATTCG+TGG	0.547737	7:-89158249	MsaT039448.1:CDS
ATAAGAGTTAAGCCTATGGT+TGG	0.547914	7:-89157879	MsaT039448.1:CDS
AGCAAAGATTCATATTCAGA+AGG	0.550210	7:+89158687	None:intergenic
AGATCCCTTAAGCCAACCAT+AGG	0.552682	7:+89157867	None:intergenic
AAGAATATTGTTGCAAAGGG+TGG	0.552691	7:-89158390	MsaT039448.1:CDS
GCGTCTATGTAGCATACTGC+AGG	0.554692	7:-89157937	MsaT039448.1:CDS
AAGAGGAGAAATCGAGGGTG+GGG	0.556838	7:-89157842	MsaT039448.1:CDS
CGTTAATAGGGTTGTAACGA+AGG	0.566099	7:+89158745	None:intergenic
GTTGAAGAATATTGTTGCAA+AGG	0.570077	7:-89158394	MsaT039448.1:CDS
AATGCTGTTGCTGTAAGTCC+AGG	0.570515	7:-89158465	MsaT039448.1:CDS
TTTAAGGCGTTCAGAGGTAA+GGG	0.573608	7:-89157759	MsaT039448.1:CDS
GGAAGAGGAGAAATCGAGGG+TGG	0.579631	7:-89157844	MsaT039448.1:CDS
ATAACTGGCTCGTAGACCAC+GGG	0.581712	7:-89157509	MsaT039448.1:CDS
TCCCAAACTTGAAGGCCAGA+CGG	0.582508	7:+89157405	None:intergenic
CTGAAGACACACCCTCAAGT+TGG	0.586419	7:+89158088	None:intergenic
ATCTGGAAGAGGAGAAATCG+AGG	0.593033	7:-89157848	MsaT039448.1:CDS
TCCTCTTGAAATGAAGAACT+GGG	0.593818	7:-89157910	MsaT039448.1:CDS
TGGGCGTTTAAGGCGTTCAG+AGG	0.599598	7:-89157765	MsaT039448.1:CDS
AAACTTGAAGGCCAGACGGA+TGG	0.607382	7:+89157409	None:intergenic
TCTTAATCAGAACACAGATA+GGG	0.611252	7:-89157646	MsaT039448.1:CDS
TAAAATCTAGGGTTTAGAGA+GGG	0.617900	7:+89158999	None:intergenic
TATAACTGGCTCGTAGACCA+CGG	0.623871	7:-89157510	MsaT039448.1:CDS
GTAAGTCCAGGGATTCTGGT+TGG	0.632171	7:-89158453	MsaT039448.1:CDS
ATGGTGCTCAAAGCAAGCCC+GGG	0.635036	7:+89157477	None:intergenic
GTGTTCTGATTAAGAATCTG+AGG	0.641643	7:+89157654	None:intergenic
GTGGAAACTCGAGAAACAAG+AGG	0.644988	7:+89158135	None:intergenic
TGGTTTCAGTGAGAAACAGT+TGG	0.649810	7:-89158265	MsaT039448.1:CDS
TGGAAACTCGAGAAACAAGA+GGG	0.652528	7:+89158136	None:intergenic
TAATAGGGTTGTAACGAAGG+TGG	0.654329	7:+89158748	None:intergenic
GTGTTCCTCGATCCAAAATG+GGG	0.658605	7:-89158593	MsaT039448.1:CDS
CACCATAGTTACACAGACTG+TGG	0.658934	7:+89158613	None:intergenic
TCAAAAGAGGATCATCGTTG+AGG	0.659008	7:+89158646	None:intergenic
TTGAGGAAAATCAAATCACG+TGG	0.663073	7:+89158663	None:intergenic
GCCCGGGATTCACAGCCCCG+TGG	0.676521	7:+89157493	None:intergenic
ATGCTGTTGCTGTAAGTCCA+GGG	0.682252	7:-89158464	MsaT039448.1:CDS
AACTTGACCATCGAAATCTG+TGG	0.684694	7:+89158116	None:intergenic
TCTGGAAGAGGAGAAATCGA+GGG	0.689277	7:-89157847	MsaT039448.1:CDS
TAACTGGCTCGTAGACCACG+GGG	0.784650	7:-89157508	MsaT039448.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	89157368	89159093	89157368	ID=MsaG039448
Chr7	mRNA	89157368	89159093	89157368	ID=MsaT039448.1;Parent=MsaG039448
Chr7	exon	89157368	89157966	89157368	ID=MsaT039448.1.exon2;Parent=MsaT039448.1
Chr7	CDS	89157368	89157966	89157368	ID=cds.MsaT039448.1;Parent=MsaT039448.1
Chr7	exon	89158100	89159093	89158100	ID=MsaT039448.1.exon1;Parent=MsaT039448.1
Chr7	CDS	89158100	89159093	89158100	ID=cds.MsaT039448.1;Parent=MsaT039448.1

Gene Sequence

>MsaT039448.1

ATGATCGACCTTAGAAAACTGAGATTAACATTCACATTTTTCAATCTCACCAAAAATCACACCAATCTTAAACCCTCTCTAAACCCTAGATTTTACAACACAGCGAAAAACCCAATTCAATTAGTTTCAAAACCTAAAATTCTCTCAAAATCAACCATTAAAGAAGCCCAAGCTGCATTGTTAGAATATCTCCATTCCACAAGAAGCTTGCAGTTTTTAGATGCAGATAACATGTGCAAAAACTCGCCTTTTTTCCTTCAAAATCTCGTCCACAAAACCCTAAAAAACGAGAAATCGATTAACACGAAACGGTTAATATCTCGCCACCTTCGTTACAACCCTATTAACGAATTTGAACCCTTTTTCGAGAGTTTGGGTTTGAAGCCTTCTGAATATGAATCTTTGCTTCCACGTGATTTGATTTTCCTCAACGATGATCCTCTTTTGATGGCGAATTACCACAGTCTGTGTAACTATGGTGTTCCTCGATCCAAAATGGGGAAAATTTTCAAACAAACGCCGCAAGTTTTTAAATTTGAAAATGGGGTTTTGGTTTCGAAGATTAAGGCTTATGAAGATTTGGGTATTTCGACTTCGATTTTAGTGAATGCTGTTGCTGTAAGTCCAGGGATTCTGGTTGGTGATGTTAATGTTGAATTTGTTAAGGTTGTTGAGATGTTGAAGAATATTGTTGCAAAGGGTGGTGATGGTGATTTTGATAGTGGTTGGATTCAGTGGCATTTTTTGGATGAGGTTTCTTGTAATTGGGGTTTAATGCTTGAGCTATTGTGCTTGCTTTCGAATGTTGGTTTCAGTGAGAAACAGTTGGCTGAGATTATTCGTGGTAGTCCTTGTATTATTTTTGAAGAATCAGGAGGAAAGACACTCGATGATTGGTTTTTTGGTCAAATTTGGATTGTCTGTGAACCAGATTGCCCTCTTGTTTCTCGAGTTTCCACAGATTTCGATGGTCAAGTTTTTTGCCAACTTGAGGGTAAGAGGCGTCTATGTAGCATACTGCAGGATAATCCTCTTGAAATGAAGAACTGGGTTCTTGGAATAAGAGTTAAGCCTATGGTTGGCTTAAGGGATCTGGAAGAGGAGAAATCGAGGGTGGGGAAGACAGAGTTCTTGTTGCGCTTAGGTTATGTGGAAAACACGAAAGAAATGGATTGGGCGTTTAAGGCGTTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGATTTGATTTTATTGTTAATACTGGATTGACACGTGATGAAGTTCGTAGAATGATTAGAGTTTCACCTCAGATTCTTAATCAGAACACAGATAGGGTCAAGATGAAAATTGAGTATCTTGTAAAGAAAGGATTTTCTGTATCAGATTTAGTGAGTTTTCCATCATATCTTTCCTATAAATCTCCAAGAGTTAAGCTTAGGTTGTCAATGTATAACTGGCTCGTAGACCACGGGGCTGTGAATCCCGGGCTTGCTTTGAGCACCATTATCGCATGCACAGATAATTTATTCTTACAAAGTTATGTAAAACGCCATCCGTCTGGCCTTCAAGTTTGGGAAGAGTTGCAAAAAGAAATTCATTCTGAAGATTCATGA

Protein sequence

>MsaT039448.1

MIDLRKLRLTFTFFNLTKNHTNLKPSLNPRFYNTAKNPIQLVSKPKILSKSTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVHKTLKNEKSINTKRLISRHLRYNPINEFEPFFESLGLKPSEYESLLPRDLIFLNDDPLLMANYHSLCNYGVPRSKMGKIFKQTPQVFKFENGVLVSKIKAYEDLGISTSILVNAVAVSPGILVGDVNVEFVKVVEMLKNIVAKGGDGDFDSGWIQWHFLDEVSCNWGLMLELLCLLSNVGFSEKQLAEIIRGSPCIIFEESGGKTLDDWFFGQIWIVCEPDCPLVSRVSTDFDGQVFCQLEGKRRLCSILQDNPLEMKNWVLGIRVKPMVGLRDLEEEKSRVGKTEFLLRLGYVENTKEMDWAFKAFRGKGAELQERFDFIVNTGLTRDEVRRMIRVSPQILNQNTDRVKMKIEYLVKKGFSVSDLVSFPSYLSYKSPRVKLRLSMYNWLVDHGAVNPGLALSTIIACTDNLFLQSYVKRHPSGLQVWEELQKEIHSEDS*