AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG039721

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG039721 MtrunA17_Chr7g0261401 92.848 825 53 3 331 1153 10 830 0.0 1571
MsaG039721 MtrunA17_Chr1g0189211 50.416 601 276 6 403 1000 116 697 0.0 622
MsaG039721 MtrunA17_Chr7g0261411 98.587 283 4 0 1 283 1 283 0.0 594
MsaG039721 MtrunA17_Chr2g0303101 44.262 610 318 10 419 1026 34 623 1.45e-148 472
MsaG039721 MtrunA17_Chr1g0183741 76.842 285 46 8 1 283 1 267 1.71e-143 433
MsaG039721 MtrunA17_Chr8g0380981 42.014 576 319 6 419 994 25 585 8.00e-143 458
MsaG039721 MtrunA17_Chr2g0312321 62.893 159 50 3 6 159 7 161 1.36e-62 215
MsaG039721 MtrunA17_Chr3g0139331 43.426 251 124 5 9 246 10 255 2.19e-57 202
MsaG039721 MtrunA17_Chr2g0316971 56.250 160 64 1 8 161 21 180 2.20e-54 194
MsaG039721 MtrunA17_Chr1g0147421 47.549 204 99 3 2 197 19 222 5.71e-54 192
MsaG039721 MtrunA17_Chr5g0397501 33.176 425 232 9 559 973 301 683 8.08e-54 206
MsaG039721 MtrunA17_Chr5g0397501 45.349 86 41 2 437 522 28 107 3.56e-13 74.7
MsaG039721 MtrunA17_Chr4g0060931 55.844 154 60 3 10 157 17 168 5.08e-52 187
MsaG039721 MtrunA17_Chr6g0484441 55.629 151 63 2 9 157 4 152 6.39e-51 182
MsaG039721 MtrunA17_Chr5g0405211 50.000 174 80 4 10 178 8 179 1.91e-50 182
MsaG039721 MtrunA17_Chr7g0253011 42.754 276 114 10 5 240 12 283 2.44e-50 183
MsaG039721 MtrunA17_Chr3g0091921 55.195 154 61 3 10 157 16 167 5.92e-50 179
MsaG039721 MtrunA17_Chr6g0453451 47.236 199 81 5 10 196 20 206 6.19e-50 179
MsaG039721 MtrunA17_Chr4g0018391 53.247 154 65 3 8 156 5 156 1.56e-49 179
MsaG039721 MtrunA17_Chr6g0461661 53.503 157 67 2 10 160 18 174 4.76e-49 179
MsaG039721 MtrunA17_Chr1g0200561 52.866 157 67 4 5 156 14 168 5.28e-49 178
MsaG039721 MtrunA17_Chr4g0017921 48.649 185 77 4 8 176 6 188 5.29e-49 178
MsaG039721 MtrunA17_Chr4g0056541 41.597 238 109 8 8 231 5 226 8.34e-49 178
MsaG039721 MtrunA17_Chr8g0372121 49.711 173 77 5 10 174 6 176 2.60e-48 174
MsaG039721 MtrunA17_Chr5g0398971 52.564 156 65 4 8 156 5 158 5.27e-48 175
MsaG039721 MtrunA17_Chr2g0309891 54.487 156 62 3 9 157 5 158 1.29e-47 174
MsaG039721 MtrunA17_Chr6g0481091 52.564 156 66 3 8 157 4 157 2.77e-47 169
MsaG039721 MtrunA17_Chr3g0144271 54.483 145 62 2 10 153 23 164 1.23e-46 173
MsaG039721 MtrunA17_Chr7g0252971 36.332 289 141 8 8 253 6 294 1.55e-46 171
MsaG039721 MtrunA17_Chr2g0318101 50.000 164 67 2 9 157 14 177 1.71e-46 171
MsaG039721 MtrunA17_Chr4g0047841 46.369 179 69 2 10 161 15 193 3.44e-46 169
MsaG039721 MtrunA17_Chr4g0042561 44.886 176 86 4 8 175 7 179 4.09e-45 164
MsaG039721 MtrunA17_Chr3g0109821 54.777 157 62 3 8 157 4 158 4.71e-45 174
MsaG039721 MtrunA17_Chr2g0309331 51.634 153 68 4 9 156 9 160 6.58e-45 166
MsaG039721 MtrunA17_Chr8g0384721 46.667 180 84 3 10 181 7 182 7.31e-45 164
MsaG039721 MtrunA17_Chr7g0214071 50.993 151 69 2 10 158 15 162 8.08e-45 162
MsaG039721 MtrunA17_Chr7g0217721 36.842 266 115 6 13 237 22 275 9.44e-45 166
MsaG039721 MtrunA17_Chr3g0130731 48.824 170 74 4 10 170 7 172 5.64e-44 161
MsaG039721 MtrunA17_Chr5g0433781 54.430 158 60 4 8 157 4 157 5.68e-44 170
MsaG039721 MtrunA17_Chr3g0124761 51.299 154 65 2 10 156 7 157 5.90e-44 161
MsaG039721 MtrunA17_Chr7g0263931 35.739 291 137 7 10 276 11 275 1.09e-43 162
MsaG039721 MtrunA17_Chr5g0417791 42.938 177 87 3 10 174 3 177 1.62e-43 159
MsaG039721 MtrunA17_Chr5g0400461 49.123 171 79 4 7 169 3 173 1.83e-43 161
MsaG039721 MtrunA17_Chr2g0326361 43.000 200 101 3 9 195 13 212 3.47e-43 160
MsaG039721 MtrunA17_Chr2g0318081 47.879 165 76 3 1 157 3 165 2.73e-42 159
MsaG039721 MtrunA17_Chr8g0346001 34.050 279 152 6 8 263 13 282 5.28e-42 160
MsaG039721 MtrunA17_Chr8g0359921 48.387 155 72 2 9 157 13 165 4.82e-41 154
MsaG039721 MtrunA17_Chr7g0217711 51.938 129 60 1 10 138 19 145 8.29e-41 148
MsaG039721 MtrunA17_Chr3g0092671 50.000 152 68 4 12 157 7 156 3.77e-39 154
MsaG039721 MtrunA17_Chr8g0361731 40.828 169 87 1 2 157 6 174 4.37e-39 150
MsaG039721 MtrunA17_Chr1g0197351 47.205 161 71 3 9 157 41 199 8.09e-39 152
MsaG039721 MtrunA17_Chr4g0054791 48.148 162 73 4 7 159 3 162 1.90e-38 146
MsaG039721 MtrunA17_Chr5g0417001 41.772 158 80 1 12 157 16 173 1.24e-37 146
MsaG039721 MtrunA17_Chr6g0453131 42.857 161 78 3 10 157 15 174 6.94e-37 144
MsaG039721 MtrunA17_Chr1g0197361 50.000 152 68 5 12 157 10 159 8.53e-37 147
MsaG039721 MtrunA17_Chr3g0128111 40.541 185 100 4 13 189 45 227 1.43e-36 139
MsaG039721 MtrunA17_Chr4g0076731 46.104 154 78 3 12 162 56 207 3.36e-36 143
MsaG039721 MtrunA17_Chr3g0130101 45.695 151 74 3 12 156 9 157 4.43e-36 140
MsaG039721 MtrunA17_Chr3g0116441 27.885 416 218 7 437 844 18 359 1.33e-35 147
MsaG039721 MtrunA17_Chr5g0428991 48.077 156 73 3 10 159 25 178 1.54e-35 144
MsaG039721 MtrunA17_Chr3g0128151 46.497 157 76 3 9 159 21 175 2.63e-35 143
MsaG039721 MtrunA17_Chr5g0410721 28.280 343 227 9 661 995 237 568 1.42e-34 143
MsaG039721 MtrunA17_Chr8g0364791 43.137 153 79 3 10 156 6 156 2.05e-34 138
MsaG039721 MtrunA17_Chr1g0164731 25.458 546 302 14 433 966 41 493 8.07e-34 138
MsaG039721 MtrunA17_Chr4g0038751 42.953 149 79 3 12 157 17 162 1.09e-33 132
MsaG039721 MtrunA17_Chr5g0442771 41.104 163 74 3 12 156 20 178 1.92e-33 131
MsaG039721 MtrunA17_Chr8g0345671 46.259 147 74 4 10 153 11 155 2.86e-33 133
MsaG039721 MtrunA17_Chr1g0201021 45.395 152 75 3 12 157 21 170 7.13e-33 135
MsaG039721 MtrunA17_Chr8g0384201 41.176 153 82 3 10 156 6 156 1.24e-31 130
MsaG039721 MtrunA17_Chr2g0311651 42.073 164 77 4 12 157 24 187 1.72e-31 126
MsaG039721 MtrunA17_Chr2g0311661 40.244 164 80 3 12 157 23 186 2.74e-31 125
MsaG039721 MtrunA17_Chr8g0385991 41.290 155 80 3 8 153 12 164 5.41e-31 122
MsaG039721 MtrunA17_Chr8g0345691 43.537 147 78 4 10 153 12 156 5.65e-31 127
MsaG039721 MtrunA17_Chr3g0131911 41.718 163 81 3 8 158 12 172 7.14e-30 119
MsaG039721 MtrunA17_Chr4g0050701 36.747 166 85 3 10 164 11 167 3.79e-29 115
MsaG039721 MtrunA17_Chr2g0321631 41.401 157 78 5 11 154 5 160 4.45e-29 117
MsaG039721 MtrunA17_Chr3g0113001 38.571 210 103 10 43 237 1 199 4.95e-29 118
MsaG039721 MtrunA17_Chr4g0026141 38.365 159 81 5 10 154 5 160 1.52e-27 113
MsaG039721 MtrunA17_Chr8g0345711 43.411 129 69 3 10 135 12 139 3.05e-27 109
MsaG039721 MtrunA17_Chr1g0199511 34.946 186 109 2 661 840 295 474 3.99e-27 120
MsaG039721 MtrunA17_Chr7g0266701 35.152 165 91 5 9 158 3 166 1.87e-26 109
MsaG039721 MtrunA17_Chr1g0164761 31.359 287 173 10 689 966 166 437 2.33e-26 115
MsaG039721 MtrunA17_Chr8g0345721 35.882 170 71 4 4 136 24 192 8.52e-25 103
MsaG039721 MtrunA17_Chr8g0345701 38.356 146 70 5 8 136 5 147 8.71e-25 102
MsaG039721 MtrunA17_Chr8g0345731 40.458 131 73 3 10 135 24 154 3.59e-23 97.8
MsaG039721 MtrunA17_Chr7g0243371 53.750 80 37 0 65 144 19 98 3.68e-23 95.9
MsaG039721 MtrunA17_Chr3g0113031 37.778 180 90 7 73 237 3 175 1.99e-22 98.6
MsaG039721 MtrunA17_Chr2g0321741 40.411 146 78 5 30 171 12 152 4.00e-22 99.8
MsaG039721 MtrunA17_Chr8g0345741 34.416 154 92 4 21 171 2 149 5.37e-21 90.9
MsaG039721 MtrunA17_Chr8g0384351 38.255 149 74 5 10 158 10 140 1.12e-20 90.9
MsaG039721 MtrunA17_Chr7g0251651 30.968 155 86 6 7 158 15 151 3.29e-16 78.6
MsaG039721 MtrunA17_Chr7g0251671 34.000 150 83 5 1 143 1 141 3.31e-16 77.4
MsaG039721 MtrunA17_Chr3g0130321 31.034 174 78 7 10 158 7 163 3.57e-15 75.9
MsaG039721 MtrunA17_Chr7g0251661 29.932 147 97 4 1 145 1 143 4.23e-14 71.2
MsaG039721 MtrunA17_Chr2g0282871 30.120 166 97 6 9 158 52 214 1.67e-11 67.0
MsaG039721 MtrunA17_Chr3g0113011 51.064 47 23 0 10 56 19 65 2.85e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG039721 AT1G08620.2 47.302 630 314 5 399 1023 108 724 2.68e-174 546
MsaG039721 AT1G08620.4 47.302 630 314 5 399 1023 108 724 2.68e-174 546
MsaG039721 AT1G08620.1 47.302 630 314 5 399 1023 108 724 2.68e-174 546
MsaG039721 AT1G08620.3 47.302 630 314 5 399 1023 122 738 4.30e-174 546
MsaG039721 AT4G20400.1 42.832 565 307 5 419 983 38 586 4.42e-146 464
MsaG039721 AT1G30810.3 41.491 617 326 10 377 989 7 592 2.52e-144 456
MsaG039721 AT1G30810.2 41.491 617 326 10 377 989 7 592 2.52e-144 456
MsaG039721 AT1G30810.1 41.491 617 326 10 377 989 7 592 2.52e-144 456
MsaG039721 AT2G38950.1 38.082 709 353 16 310 1011 10 639 6.70e-143 448
MsaG039721 AT2G34880.1 41.068 599 311 14 393 982 15 580 8.78e-135 430
MsaG039721 AT4G20400.2 41.744 539 298 4 445 983 7 529 2.36e-134 431
MsaG039721 AT4G28530.1 73.143 175 31 2 1 159 1 175 1.91e-84 279
MsaG039721 AT1G56010.2 47.009 234 100 5 6 231 15 232 2.39e-58 204
MsaG039721 AT1G63490.1 33.573 417 240 9 559 973 45 426 4.34e-57 216
MsaG039721 AT1G63490.2 33.573 417 240 9 559 973 298 679 5.67e-57 217
MsaG039721 AT1G63490.2 43.023 86 43 2 437 522 31 110 2.45e-12 72.4
MsaG039721 AT1G63490.4 33.573 417 240 9 559 973 298 679 5.83e-57 216
MsaG039721 AT1G63490.4 43.023 86 43 2 437 522 31 110 2.43e-12 72.4
MsaG039721 AT3G12977.1 56.688 157 61 3 6 157 14 168 8.56e-56 195
MsaG039721 AT1G76420.1 56.688 157 65 1 9 162 21 177 1.59e-55 197
MsaG039721 AT2G24430.2 54.902 153 66 1 9 158 15 167 8.21e-55 194
MsaG039721 AT2G24430.1 54.902 153 66 1 9 158 15 167 8.21e-55 194
MsaG039721 AT4G28530.2 54.286 175 27 3 1 159 1 138 3.89e-53 189
MsaG039721 AT5G07680.2 56.494 154 59 3 10 157 3 154 9.52e-53 188
MsaG039721 AT5G61430.1 57.143 154 58 3 10 157 16 167 1.11e-52 188
MsaG039721 AT5G07680.1 56.494 154 59 3 10 157 17 168 1.42e-52 188
MsaG039721 AT5G53950.1 56.494 154 61 2 10 157 17 170 1.71e-52 189
MsaG039721 AT3G18400.1 55.921 152 62 3 9 157 4 153 2.16e-52 187
MsaG039721 AT4G36160.1 48.718 195 90 6 5 194 5 194 8.78e-51 184
MsaG039721 AT4G36160.3 48.718 195 90 6 5 194 5 194 8.78e-51 184
MsaG039721 AT4G36160.2 48.718 195 90 6 5 194 9 198 1.01e-50 184
MsaG039721 AT5G39610.1 55.556 153 60 3 10 156 20 170 2.17e-50 180
MsaG039721 AT2G18060.3 47.120 191 91 5 9 194 8 193 2.82e-50 182
MsaG039721 AT2G18060.1 47.120 191 91 5 9 194 8 193 2.82e-50 182
MsaG039721 AT1G71930.2 41.975 243 111 6 6 243 5 222 2.82e-50 181
MsaG039721 AT1G71930.1 41.975 243 111 6 6 243 5 222 2.82e-50 181
MsaG039721 AT3G15170.1 50.617 162 74 1 10 165 20 181 1.05e-49 179
MsaG039721 AT4G10350.1 46.535 202 82 6 8 185 7 206 2.85e-49 179
MsaG039721 AT3G29035.1 48.936 188 74 4 10 191 24 195 3.62e-49 177
MsaG039721 AT3G04060.1 54.545 154 63 3 10 157 20 172 4.81e-49 178
MsaG039721 AT1G12260.2 53.247 154 65 3 8 156 5 156 4.95e-49 178
MsaG039721 AT5G18270.1 54.487 156 64 3 8 157 19 173 5.98e-49 177
MsaG039721 AT5G18270.2 54.487 156 64 3 8 157 19 173 7.04e-49 177
MsaG039721 AT1G12260.1 53.247 154 65 3 8 156 5 156 1.10e-48 179
MsaG039721 AT5G66300.1 52.830 159 67 4 4 156 6 162 1.24e-48 175
MsaG039721 AT1G33280.1 48.087 183 84 4 8 181 6 186 4.82e-48 174
MsaG039721 AT3G04070.2 47.619 168 74 2 4 157 4 171 7.62e-48 175
MsaG039721 AT1G62700.1 52.597 154 66 3 8 156 5 156 2.72e-47 175
MsaG039721 AT1G62700.2 52.597 154 66 3 8 156 5 156 2.72e-47 175
MsaG039721 AT5G62380.2 52.147 163 71 4 8 165 5 165 6.02e-47 172
MsaG039721 AT5G62380.1 52.147 163 71 4 8 165 5 165 6.02e-47 172
MsaG039721 AT3G17730.1 51.923 156 67 3 8 157 4 157 8.62e-47 168
MsaG039721 AT3G03200.1 53.846 156 63 3 8 156 4 157 6.05e-46 173
MsaG039721 AT5G17260.1 52.564 156 65 3 8 156 4 157 1.32e-45 172
MsaG039721 AT3G04070.1 43.316 187 76 2 1 157 1 187 1.44e-45 169
MsaG039721 AT1G54330.1 55.263 152 63 3 9 157 5 154 1.50e-45 167
MsaG039721 AT3G15510.1 41.117 197 100 3 14 195 21 216 2.92e-44 165
MsaG039721 AT1G79580.3 51.974 152 68 3 9 156 16 166 4.38e-44 165
MsaG039721 AT1G79580.5 51.974 152 68 3 9 156 16 166 4.38e-44 165
MsaG039721 AT1G79580.4 51.974 152 68 3 9 156 16 166 4.38e-44 165
MsaG039721 AT1G79580.2 51.974 152 68 3 9 156 16 166 4.38e-44 165
MsaG039721 AT1G79580.1 51.974 152 68 3 9 156 16 166 4.38e-44 165
MsaG039721 AT1G61110.1 47.486 179 74 4 1 160 4 181 1.15e-43 162
MsaG039721 AT1G32770.1 45.181 166 72 3 8 156 14 177 1.71e-43 162
MsaG039721 AT1G01720.1 43.590 195 97 3 10 196 7 196 3.49e-43 159
MsaG039721 AT5G08790.1 43.523 193 97 2 9 192 6 195 3.60e-43 159
MsaG039721 AT1G65910.1 53.125 160 67 3 8 161 4 161 4.93e-43 167
MsaG039721 AT2G46770.1 44.379 169 72 3 8 156 14 180 5.39e-43 161
MsaG039721 AT5G46910.2 27.580 562 301 18 432 986 98 560 5.51e-43 167
MsaG039721 AT3G61910.1 41.951 205 95 4 8 190 9 211 7.24e-43 160
MsaG039721 AT3G10480.1 50.000 158 70 3 7 157 24 179 7.61e-43 163
MsaG039721 AT1G69490.1 46.497 157 74 2 8 156 7 161 1.29e-42 157
MsaG039721 AT4G27410.2 48.485 165 75 4 1 157 1 163 1.34e-42 158
MsaG039721 AT3G10490.1 47.239 163 77 3 2 157 19 179 1.49e-42 156
MsaG039721 AT3G15500.1 48.780 164 74 3 1 156 1 162 2.15e-42 158
MsaG039721 AT1G52890.1 46.199 171 86 2 9 175 13 181 2.28e-42 158
MsaG039721 AT5G46590.1 42.130 216 109 6 6 213 1 208 2.86e-42 157
MsaG039721 AT5G63790.1 49.045 157 68 2 9 156 49 202 3.66e-42 157
MsaG039721 AT5G46910.1 27.758 562 300 19 432 986 98 560 4.01e-42 167
MsaG039721 AT5G63790.2 49.045 157 68 2 9 156 59 212 5.40e-42 157
MsaG039721 AT4G35580.1 45.050 202 101 4 9 202 8 207 6.88e-42 162
MsaG039721 AT3G10480.2 50.955 157 69 4 7 157 24 178 7.68e-42 160
MsaG039721 AT1G77450.1 48.428 159 70 3 7 156 5 160 1.19e-41 154
MsaG039721 AT4G35580.3 45.050 202 101 4 9 202 8 207 1.33e-41 161
MsaG039721 AT4G35580.2 45.050 202 101 4 9 202 8 207 1.34e-41 161
MsaG039721 AT3G10490.2 47.239 163 77 3 2 157 19 179 1.42e-41 159
MsaG039721 AT5G04410.1 49.677 155 70 3 9 157 8 160 4.28e-41 160
MsaG039721 AT1G33060.1 51.299 154 67 3 9 156 23 174 9.68e-41 161
MsaG039721 AT1G33060.2 51.299 154 67 3 9 156 23 174 1.13e-40 160
MsaG039721 AT5G13180.1 35.484 248 138 4 10 253 14 243 1.98e-40 150
MsaG039721 AT3G10500.1 49.032 155 71 3 9 157 8 160 9.53e-40 156
MsaG039721 AT1G56010.1 46.961 181 73 4 58 231 1 165 1.44e-39 148
MsaG039721 AT4G17980.1 48.171 164 72 4 6 158 1 162 2.10e-39 147
MsaG039721 AT1G32510.1 46.667 165 76 3 6 158 2 166 2.28e-39 148
MsaG039721 AT5G46590.2 52.593 135 60 3 6 137 1 134 2.62e-39 148
MsaG039721 AT4G27410.3 45.055 182 73 6 1 157 1 180 2.65e-39 149
MsaG039721 AT4G17980.2 48.171 164 72 4 6 158 1 162 3.87e-39 148
MsaG039721 AT5G39820.1 35.169 236 109 4 12 208 22 252 8.44e-39 148
MsaG039721 AT2G33480.2 47.097 155 75 3 10 162 15 164 7.47e-38 143
MsaG039721 AT2G33480.1 46.497 157 75 3 10 162 15 166 9.63e-38 143
MsaG039721 AT2G02450.1 41.436 181 85 4 12 174 53 230 2.01e-37 145
MsaG039721 AT3G12977.2 60.185 108 36 3 55 157 10 115 3.75e-37 140
MsaG039721 AT2G02450.2 41.436 181 85 4 12 174 53 230 5.03e-37 145
MsaG039721 AT3G10480.3 41.885 191 69 4 7 157 24 212 5.71e-37 147
MsaG039721 AT1G26870.1 40.741 162 81 2 10 157 16 176 8.06e-37 145
MsaG039721 AT2G43000.1 43.312 157 80 3 12 162 20 173 8.74e-37 140
MsaG039721 AT5G24590.2 47.742 155 74 3 8 156 11 164 2.18e-36 144
MsaG039721 AT3G49530.2 44.805 154 78 3 9 156 12 164 3.37e-35 140
MsaG039721 AT2G27300.1 46.259 147 73 3 8 153 12 153 5.10e-35 137
MsaG039721 AT3G49530.1 44.805 154 78 3 9 156 12 164 6.75e-35 140
MsaG039721 AT1G52880.1 43.860 171 74 4 14 169 21 184 8.20e-35 136
MsaG039721 AT2G17040.1 42.953 149 79 3 12 157 8 153 4.60e-34 132
MsaG039721 AT5G09330.5 44.444 153 77 3 10 156 6 156 6.99e-34 137
MsaG039721 AT5G09330.2 44.444 153 77 3 10 156 6 156 6.99e-34 137
MsaG039721 AT5G09330.4 44.444 153 77 3 10 156 6 156 6.99e-34 137
MsaG039721 AT5G09330.3 44.444 153 77 3 10 156 6 156 6.99e-34 137
MsaG039721 AT5G09330.1 44.444 153 77 3 10 156 6 156 6.99e-34 137
MsaG039721 AT5G61430.2 59.434 106 35 3 58 157 1 104 1.51e-33 131
MsaG039721 AT1G34180.3 42.105 152 80 3 12 157 18 167 1.94e-33 135
MsaG039721 AT4G10350.2 48.252 143 51 5 64 185 19 159 5.46e-33 130
MsaG039721 AT1G34180.1 42.105 152 80 3 12 157 18 167 9.07e-33 135
MsaG039721 AT1G34190.1 42.105 152 80 3 12 157 18 167 1.27e-32 135
MsaG039721 AT1G34180.4 39.024 164 80 3 12 157 18 179 2.27e-31 129
MsaG039721 AT3G12910.1 43.636 165 73 5 12 157 23 186 6.55e-31 124
MsaG039721 AT1G34180.2 39.024 164 80 3 12 157 18 179 9.41e-31 129
MsaG039721 AT5G64060.1 39.355 155 86 3 9 157 5 157 2.60e-30 124
MsaG039721 AT1G32870.1 44.242 165 80 4 1 157 1 161 3.66e-30 127
MsaG039721 AT1G32870.2 44.242 165 80 4 1 157 1 161 4.42e-30 126
MsaG039721 AT5G04395.1 43.357 143 67 2 9 137 27 169 8.07e-30 117
MsaG039721 AT1G32870.3 44.242 165 80 4 1 157 37 197 8.23e-30 126
MsaG039721 AT5G04240.1 34.694 196 126 2 646 840 248 442 1.10e-29 129
MsaG039721 AT5G22290.1 38.012 171 95 5 4 168 10 175 7.62e-29 119
MsaG039721 AT1G63490.3 33.040 227 139 4 747 973 7 220 1.31e-28 125
MsaG039721 AT3G44290.2 44.000 125 67 2 12 135 16 138 6.12e-28 113
MsaG039721 AT3G48430.1 37.569 181 109 2 662 840 205 383 1.50e-27 122
MsaG039721 AT3G44350.2 35.648 216 116 8 6 205 1 209 4.04e-27 111
MsaG039721 AT3G44290.1 40.559 143 79 3 12 153 16 153 5.30e-27 114
MsaG039721 AT4G01550.1 33.197 244 137 8 13 244 7 236 4.20e-26 113
MsaG039721 AT3G44350.1 41.912 136 73 3 6 136 1 135 1.81e-24 101
MsaG039721 AT5G64530.1 32.240 183 92 4 9 171 2 172 2.33e-24 102
MsaG039721 AT2G33480.3 49.020 102 46 2 65 162 10 109 4.38e-24 102
MsaG039721 AT5G22380.1 37.013 154 84 5 13 154 8 160 2.40e-22 97.8
MsaG039721 AT4G01520.1 37.013 154 89 6 11 158 5 156 3.93e-22 99.0
MsaG039721 AT5G64530.2 36.434 129 70 2 9 137 2 118 3.90e-21 92.0
MsaG039721 AT1G02230.1 36.364 154 90 5 11 159 4 154 4.85e-21 97.1
MsaG039721 AT4G01540.3 36.842 152 88 6 13 158 7 156 7.66e-21 97.4
MsaG039721 AT4G01540.1 36.842 152 88 6 13 158 7 156 8.37e-21 97.8
MsaG039721 AT4G01540.2 36.842 152 88 6 13 158 7 156 9.13e-21 97.1
MsaG039721 AT4G01540.4 36.842 152 88 6 13 158 7 156 1.04e-20 96.3
MsaG039721 AT2G18060.2 56.944 72 27 3 87 156 1 70 2.94e-20 92.8
MsaG039721 AT3G04420.2 33.333 150 93 4 11 156 4 150 5.37e-19 89.4
MsaG039721 AT3G04420.1 33.333 150 93 4 11 156 4 150 6.11e-19 90.1
MsaG039721 AT3G10490.4 52.500 80 31 2 83 157 2 79 5.94e-18 87.4
MsaG039721 AT3G10490.3 52.500 80 31 2 83 157 2 79 5.94e-18 87.4
MsaG039721 AT1G01010.1 34.177 158 89 6 13 159 6 159 8.96e-17 84.7
MsaG039721 AT2G43000.2 42.857 98 47 3 71 162 1 95 2.85e-16 79.0
MsaG039721 AT1G02250.1 32.432 148 92 4 11 153 4 148 8.47e-16 81.3
MsaG039721 AT5G50820.1 37.226 137 62 5 10 137 17 138 2.13e-15 76.3
MsaG039721 AT1G02220.1 31.081 148 92 5 11 154 4 145 1.40e-14 77.8
MsaG039721 AT3G04430.1 35.507 138 75 5 16 141 6 141 1.98e-14 73.9
MsaG039721 AT3G56530.1 27.815 151 102 4 9 154 51 199 3.82e-13 72.4
MsaG039721 AT3G55210.1 27.607 163 102 4 6 154 7 167 4.06e-12 68.6
MsaG039721 AT1G28470.1 31.325 166 95 7 9 158 76 238 4.14e-11 66.2

Find 284 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAACAATTACTGCATTT+TGG 0.161845 7:+92234056 None:intergenic
GAAAATTTCTGTGCAGCTTC+AGG 0.197788 7:+92232886 None:intergenic
AACTAAGTGCAGTCTATAAA+TGG 0.202723 7:-92230704 MsaT039721.1:CDS
TGTTTCTCCACCAAAGAATT+TGG 0.204908 7:+92230519 None:intergenic
GTAACCGTGCTATTATTATT+TGG 0.209937 7:+92242548 None:intergenic
TAAGGATAAGAATAAGATTA+TGG 0.215631 7:-92233280 MsaT039721.1:CDS
ACTTCACTGCCAGTTGTAAA+AGG 0.230547 7:-92230908 MsaT039721.1:CDS
AAAAGTACTTCAACTAATAA+TGG 0.231367 7:-92233405 MsaT039721.1:CDS
GAAGAAACTTCAGAAACTTT+TGG 0.238244 7:+92230249 None:intergenic
CTTCCAAAAGGGACCAAATA+TGG 0.238729 7:-92234083 MsaT039721.1:CDS
CTGTTGACTTTGAAACAATT+TGG 0.245122 7:-92232628 MsaT039721.1:CDS
CTCATTATATTACATGCATT+TGG 0.245461 7:-92232690 MsaT039721.1:CDS
GAGTTTGTTCTTGTCTTTCC+TGG 0.259269 7:-92231553 MsaT039721.1:CDS
CATCCATATTTGGTCCCTTT+TGG 0.264250 7:+92234080 None:intergenic
CCTCTTGAGTGGTTGCTTCA+TGG 0.276894 7:-92231472 MsaT039721.1:CDS
CTGAAGCCACACCATCTTCT+AGG 0.277699 7:+92242459 None:intergenic
AATGCTTGTTGCAGCAGATT+TGG 0.282959 7:+92230356 None:intergenic
GCATCCTCCTATGACTAAAT+TGG 0.292585 7:-92235267 MsaT039721.1:intron
CAAGATCCCATTTCTTTGAT+AGG 0.293387 7:+92231294 None:intergenic
TCTTCTGTTGGACGGAAAAT+AGG 0.293809 7:+92233894 None:intergenic
TCCCCAATTGCCTTGCTATC+AGG 0.296863 7:+92230303 None:intergenic
AAAATTACCAATTTAGTCAT+AGG 0.309535 7:+92235260 None:intergenic
AGTTAAACCAAGATCTTCTT+TGG 0.311186 7:+92230680 None:intergenic
TTTGATTTCTGGGAGGCAAC+TGG 0.312468 7:+92230651 None:intergenic
GGATGCAAGAAGAGAAGTTC+TGG 0.317535 7:-92233925 MsaT039721.1:CDS
TATCCTGAATATTTAAAATC+TGG 0.319460 7:-92232964 MsaT039721.1:CDS
TTCATACGACAAGCTGTTAC+TGG 0.325874 7:-92231401 MsaT039721.1:CDS
GGAAATTTACTTAGAATGTT+TGG 0.326643 7:-92241341 MsaT039721.1:CDS
GGGATTTGGTGTTTCAAGAT+TGG 0.328935 7:-92242243 MsaT039721.1:CDS
CACAAATGAGGAAGTTCTTA+AGG 0.329369 7:-92246222 MsaT039721.1:CDS
ATGCTTGTTGCAGCAGATTT+GGG 0.334186 7:+92230357 None:intergenic
ACCAGATTATCATGCATATC+TGG 0.335186 7:+92232563 None:intergenic
TTTCCTGGAACATATCATTC+AGG 0.336680 7:-92231538 MsaT039721.1:CDS
CTTTACTACAAGAGAACATT+TGG 0.337778 7:-92230200 MsaT039721.1:CDS
AAGAATAAGATTATGGGTTC+TGG 0.338061 7:-92233273 MsaT039721.1:CDS
GCAGGCAACACCAAATTCTT+TGG 0.343316 7:-92230529 MsaT039721.1:CDS
ACAAACAGAGCAACTATATC+TGG 0.343800 7:-92243910 MsaT039721.1:CDS
AAAGATGCCTATCAAAGAAA+TGG 0.345096 7:-92231301 MsaT039721.1:CDS
ATGGTATTTCTTTAGCTTCC+GGG 0.345420 7:-92243959 MsaT039721.1:CDS
GGTCAAAGCTAAAGAGAAAA+TGG 0.347194 7:-92230385 MsaT039721.1:CDS
AACAGCTTTGTTCTTGTCCT+TGG 0.347232 7:-92230797 MsaT039721.1:CDS
GAGCAACTATATCTGGATAT+TGG 0.349161 7:-92243903 MsaT039721.1:CDS
TTCTCTTCTGTTCACTATAT+AGG 0.352412 7:+92231434 None:intergenic
GGATTTGGTGTTTCAAGATT+GGG 0.352450 7:-92242242 MsaT039721.1:CDS
TGTAATATAATGAGTATAAT+TGG 0.352936 7:+92232699 None:intergenic
GCTCCAAATGGTATCAAAAC+AGG 0.356435 7:-92243790 MsaT039721.1:CDS
TCATCATGGAAGAATTGTTT+TGG 0.356600 7:+92242600 None:intergenic
TGTGAACCATGGCAGCTTCC+AGG 0.356905 7:-92246170 MsaT039721.1:intron
GATCCAGTACTTCAACTATA+AGG 0.361511 7:-92233298 MsaT039721.1:CDS
GGATCAGAAATCGCTGGAAT+TGG 0.361921 7:+92233003 None:intergenic
ATTCTTGTGGAACATGGATT+TGG 0.363780 7:-92242492 MsaT039721.1:CDS
TCATTATATTACATGCATTT+GGG 0.367391 7:-92232689 MsaT039721.1:CDS
TCTGGATATTGGAAAGCAAC+TGG 0.367759 7:-92243892 MsaT039721.1:CDS
CTCCCATTGCTGTTGATGTC+TGG 0.368048 7:+92233239 None:intergenic
CGTTCCGAAGCAGAACCTTA+TGG 0.368325 7:-92233654 MsaT039721.1:CDS
ATCTTTACATGTTATGTTGT+CGG 0.370917 7:+92231318 None:intergenic
GAGATGATGACATCAAAGTT+AGG 0.374943 7:+92242711 None:intergenic
GGTTTAGTCGATGTGGGGAT+TGG 0.377588 7:+92235389 None:intergenic
CCTACAACCTCTTGTGTGAT+TGG 0.380585 7:+92243847 None:intergenic
TTATCCAAGTGATGAGGAAT+TGG 0.381621 7:-92246270 MsaT039721.1:CDS
AAGTCAACAGAACATCTTCC+TGG 0.381852 7:+92232641 None:intergenic
GAATTGTTGTGTGTTGAGTT+TGG 0.385310 7:+92242757 None:intergenic
GGCAAAGGCACATGCTAGAT+TGG 0.386789 7:-92242264 MsaT039721.1:CDS
TGGGACACCATACCATACTT+TGG 0.389184 7:+92232661 None:intergenic
TGCTGTGACACTTTGGAGGC+TGG 0.391434 7:-92233045 MsaT039721.1:CDS
GCTCAAATTCAGCGAATTGA+TGG 0.393112 7:-92233546 MsaT039721.1:CDS
TCCAAAGGTGATGATGGATA+TGG 0.397088 7:-92242515 MsaT039721.1:CDS
AATGGTATTTCTTTAGCTTC+CGG 0.397370 7:-92243960 MsaT039721.1:CDS
CCGTTATGAAATCAGTGAAT+TGG 0.398301 7:-92230754 MsaT039721.1:CDS
GCCAGATATGCATGATAATC+TGG 0.402570 7:-92232564 MsaT039721.1:intron
AAAGTACTTCAACTAATAAT+GGG 0.403187 7:-92233404 MsaT039721.1:CDS
TACTAGGGATCCGCTTGGCT+TGG 0.406774 7:+92230481 None:intergenic
AAATGGGCCAAAGAAGATCT+TGG 0.407779 7:-92230687 MsaT039721.1:CDS
GCACATGCTAGATTGGGATT+TGG 0.410171 7:-92242257 MsaT039721.1:CDS
AAGGATAAGAATAAGATTAT+GGG 0.410951 7:-92233279 MsaT039721.1:CDS
ATTTGGGTGAACCCAAAGTA+TGG 0.415501 7:-92232673 MsaT039721.1:CDS
TTCTTTGAAGTCACAAAAGA+TGG 0.415550 7:-92230937 MsaT039721.1:CDS
GGGACACCATACCATACTTT+GGG 0.416059 7:+92232662 None:intergenic
GGAGGTTCTTCATCAAGCTT+TGG 0.416994 7:-92230733 MsaT039721.1:CDS
TATAGCCACTAGGGATGGTT+TGG 0.417138 7:+92242678 None:intergenic
GGGATGGTTTGGTAATTTGT+TGG 0.418314 7:+92242689 None:intergenic
TATCCTTATAGTTGAAGTAC+TGG 0.420342 7:+92233295 None:intergenic
TAAATCCAGTTGCATATTTG+CGG 0.420581 7:+92243935 None:intergenic
AAACCTGATAGCAAGGCAAT+TGG 0.421871 7:-92230306 MsaT039721.1:CDS
TTTGGAAGAGAACACTTTGT+AGG 0.423810 7:+92234098 None:intergenic
TGTGCTCTTCATACATATAT+CGG 0.424711 7:+92231342 None:intergenic
TCCATATCCATCATCACCTT+TGG 0.424892 7:+92242514 None:intergenic
TCTTTACATGTTATGTTGTC+GGG 0.425268 7:+92231319 None:intergenic
GAAAGACATTGGTGTTCTAT+AGG 0.425789 7:-92243819 MsaT039721.1:CDS
AACCTGATAGCAAGGCAATT+GGG 0.428288 7:-92230305 MsaT039721.1:CDS
AATCCTGAATGATATGTTCC+AGG 0.433145 7:+92231535 None:intergenic
GTTTAGTCGATGTGGGGATT+GGG 0.434106 7:+92235390 None:intergenic
CTTCCGGTGCATACTGAACT+TGG 0.435200 7:+92233520 None:intergenic
TATACCTCAATTTCATCAGT+TGG 0.436860 7:+92233168 None:intergenic
CTTGGATGCAATAAGATTTG+AGG 0.438363 7:-92242435 MsaT039721.1:intron
TCGCGCGCCGACTGTAATAT+AGG 0.438484 7:+92230582 None:intergenic
CTTTGTTCTTGTCCTTGGAC+AGG 0.440380 7:-92230792 MsaT039721.1:CDS
ACATATATCGGTTTCCCATC+GGG 0.442559 7:+92231354 None:intergenic
CGGGACCGCAAATATGCAAC+TGG 0.444721 7:-92243940 MsaT039721.1:CDS
GAGAATATTGAGGGTGAATA+CGG 0.446734 7:-92233207 MsaT039721.1:CDS
GATTTATTCCTGTCTGCTGT+TGG 0.450518 7:-92230864 MsaT039721.1:CDS
TTTGTTGATCACAGGAGGAC+TGG 0.451819 7:-92242838 MsaT039721.1:intron
TTGGAAGAGAACACTTTGTA+GGG 0.454423 7:+92234099 None:intergenic
CAGTTGCATATTTGCGGTCC+CGG 0.454823 7:+92243941 None:intergenic
AAAATTTCTGTGCAGCTTCA+GGG 0.455912 7:+92232887 None:intergenic
ACTAGGGATCCGCTTGGCTT+GGG 0.459280 7:+92230482 None:intergenic
CCTCTGTGTAGTCTCGTATC+AGG 0.460658 7:-92230992 MsaT039721.1:intron
CCAATCACACAAGAGGTTGT+AGG 0.461134 7:-92243847 MsaT039721.1:CDS
TTAGGACCAGGCTCAGGCTC+GGG 0.461474 7:+92233426 None:intergenic
GAAGTATTGCCATCCATCTC+AGG 0.463056 7:+92235368 None:intergenic
ATTAGTTCCAAAGGTGATGA+TGG 0.463352 7:-92242521 MsaT039721.1:CDS
GGTTCTCTGCTGTGACACTT+TGG 0.464231 7:-92233052 MsaT039721.1:CDS
GTTATCCTGCTCAGTATTGA+AGG 0.465862 7:-92231617 MsaT039721.1:CDS
ACTAAGTGCAGTCTATAAAT+GGG 0.469259 7:-92230703 MsaT039721.1:CDS
CACTGATTTCATAACGGTAA+AGG 0.470026 7:+92230760 None:intergenic
ACAAAGTGTTCTCTTCCAAA+AGG 0.471003 7:-92234095 MsaT039721.1:CDS
AAGGAGCCCGAGCCTGAGCC+TGG 0.473613 7:-92233432 MsaT039721.1:CDS
AATAATATGCGTTCACTCCC+AGG 0.476422 7:-92232931 MsaT039721.1:CDS
ACTTCTCTTCTTGCATCCTC+AGG 0.476635 7:+92233930 None:intergenic
TGTGACAAGGAGCCTGAGCC+TGG 0.477456 7:-92233369 MsaT039721.1:CDS
TTTAGGACCAGGCTCAGGCT+CGG 0.479497 7:+92233425 None:intergenic
TGTTTGGTTTCAATGAAAAG+TGG 0.483072 7:-92241325 MsaT039721.1:CDS
GAAGTTTCTTCATCAACTCC+AGG 0.483405 7:-92230237 MsaT039721.1:CDS
CACACCAATTCCTCATCACT+TGG 0.483760 7:+92246266 None:intergenic
AGCCAGACATCAACAGCAAT+GGG 0.484436 7:-92233241 MsaT039721.1:CDS
AAAGACAAGAAACGTGAGCC+TGG 0.484937 7:+92230219 None:intergenic
AAGATGCCTATCAAAGAAAT+GGG 0.487313 7:-92231300 MsaT039721.1:CDS
CTTGGATAAAATCGAAATCC+AGG 0.488698 7:+92246284 None:intergenic
GGACTACTGTGAGTACTACT+AGG 0.489601 7:+92230465 None:intergenic
AGCTAGTAGGAGGGACAATA+CGG 0.495876 7:+92233625 None:intergenic
TTGTTGATCACAGGAGGACT+GGG 0.497348 7:-92242837 MsaT039721.1:intron
CTTCACTGCCAGTTGTAAAA+GGG 0.498787 7:-92230907 MsaT039721.1:CDS
GGTAAAGGAAGTAATTCTGC+TGG 0.499869 7:-92230333 MsaT039721.1:CDS
GCAAAGGCACATGCTAGATT+GGG 0.500518 7:-92242263 MsaT039721.1:CDS
AAATCCAACTGATGAAATTG+AGG 0.504435 7:-92233172 MsaT039721.1:intron
AAATCTGCTGCAACAAGCAT+TGG 0.504588 7:-92230354 MsaT039721.1:CDS
CAGGGCTGTCAAAGGAAAGA+AGG 0.504964 7:+92232905 None:intergenic
TACATATATCGGTTTCCCAT+CGG 0.505837 7:+92231353 None:intergenic
ACAAATGAGGAAGTTCTTAA+GGG 0.506795 7:-92246221 MsaT039721.1:CDS
AGGGATCCGCTTGGCTTGGG+AGG 0.506797 7:+92230485 None:intergenic
CTCTCCCTTCAATACTGAGC+AGG 0.508006 7:+92231612 None:intergenic
TCTCTGCTGTGACACTTTGG+AGG 0.508464 7:-92233049 MsaT039721.1:CDS
CTGTTTCACGAGAATATTGA+AGG 0.508957 7:+92242573 None:intergenic
GGTGGAGAAACAGAGCGAAA+TGG 0.509394 7:-92230508 MsaT039721.1:CDS
GCTGTTACTGGGAGCAGCTA+GGG 0.511571 7:-92231389 MsaT039721.1:CDS
CTCAAATTCAGCGAATTGAT+GGG 0.516662 7:-92233545 MsaT039721.1:CDS
GATTTGGTGTTTCAAGATTG+GGG 0.519428 7:-92242241 MsaT039721.1:intron
AGATGATGACATCAAAGTTA+GGG 0.519573 7:+92242712 None:intergenic
CATAGAAAACTCACCTTAGG+AGG 0.520840 7:+92243727 None:intergenic
TTGATTTCTGGGAGGCAACT+GGG 0.523006 7:+92230652 None:intergenic
ACCTGATAGCAAGGCAATTG+GGG 0.524360 7:-92230304 MsaT039721.1:CDS
GTTCTTCATCAAGCTTTGGA+TGG 0.524369 7:-92230729 MsaT039721.1:CDS
CAATCACACAAGAGGTTGTA+GGG 0.525240 7:-92243846 MsaT039721.1:CDS
CTGAATATTTAAAATCTGGA+TGG 0.526616 7:-92232960 MsaT039721.1:CDS
AATTCCATAAGGTTCTGCTT+CGG 0.530224 7:+92233650 None:intergenic
CAAAGTGTTCTCTTCCAAAA+GGG 0.531336 7:-92234094 MsaT039721.1:CDS
ATCTCAGGTTTAGTCGATGT+GGG 0.531947 7:+92235383 None:intergenic
TGAGAGCTAGTCATAACTTC+CGG 0.532651 7:+92233504 None:intergenic
ATAGGAGCTTCACTACCTCC+TGG 0.533290 7:-92246302 MsaT039721.1:CDS
AAAGTATGGTATGGTGTCCC+AGG 0.535009 7:-92232659 MsaT039721.1:CDS
GGCGGTTTCCAGCTAGTAGG+AGG 0.535578 7:+92233615 None:intergenic
ATTACCAATTTAGTCATAGG+AGG 0.537272 7:+92235263 None:intergenic
GTATTGTCCCTCCTACTAGC+TGG 0.537758 7:-92233623 MsaT039721.1:CDS
CTCTGGTCGGATATTATCCA+TGG 0.540007 7:+92235320 None:intergenic
CCAATTCACTGATTTCATAA+CGG 0.540819 7:+92230754 None:intergenic
TATCATTCAGGATTTGATTG+TGG 0.542048 7:-92231526 MsaT039721.1:CDS
GTGGTAGGTACCTCTTCTGT+TGG 0.542721 7:+92233882 None:intergenic
CCCTCAATATTCTCAACAGA+TGG 0.545292 7:+92233216 None:intergenic
CGCGCGATGCATACAACAAG+TGG 0.545626 7:-92230566 MsaT039721.1:CDS
CTGGATATTGGAAAGCAACT+GGG 0.545781 7:-92243891 MsaT039721.1:CDS
CTGAATTTAGGACCAGGCTC+AGG 0.547456 7:+92233357 None:intergenic
TAAATGATGAAGTGTTGTCA+TGG 0.547733 7:+92242631 None:intergenic
AGATGGTGTGGCTTCAGACT+TGG 0.547899 7:-92242453 MsaT039721.1:CDS
TATATACCTGGAAGCTGCCA+TGG 0.548318 7:+92246164 None:intergenic
GTGGAAACAGCGTAAATCGC+AGG 0.548981 7:-92230547 MsaT039721.1:CDS
CCATCTGTTGAGAATATTGA+GGG 0.549278 7:-92233216 MsaT039721.1:CDS
CAAGTTTGTTATAGCCACTA+GGG 0.549346 7:+92242669 None:intergenic
TCAAAGGAAAGAAGGGAACC+TGG 0.549860 7:+92232913 None:intergenic
TGCAGCTTCAGGGCTGTCAA+AGG 0.551585 7:+92232897 None:intergenic
ACAATACGGCAAATTCCATA+AGG 0.551943 7:+92233639 None:intergenic
TTATGAAATCAGTGAATTGG+AGG 0.552346 7:-92230751 MsaT039721.1:CDS
AGCTGTTACTGGGAGCAGCT+AGG 0.552409 7:-92231390 MsaT039721.1:CDS
CTCACAATTTCAAAGAAAGT+AGG 0.553553 7:-92230276 MsaT039721.1:CDS
GAAGAAAATAGCCTAGAAGA+TGG 0.553895 7:-92242470 MsaT039721.1:CDS
CAAAGCTTAATGCAAATGAA+TGG 0.555762 7:-92243978 MsaT039721.1:CDS
TGGAAGAGAACACTTTGTAG+GGG 0.556256 7:+92234100 None:intergenic
GGCAACACCAAATTCTTTGG+TGG 0.557509 7:-92230526 MsaT039721.1:CDS
ATTAGATTTCTAGTCCTCAT+CGG 0.557913 7:+92230149 None:intergenic
TTCAGAGGATCAGAAATCGC+TGG 0.559363 7:+92232997 None:intergenic
CAGCCAGACATCAACAGCAA+TGG 0.559438 7:-92233242 MsaT039721.1:CDS
TCATACGACAAGCTGTTACT+GGG 0.559948 7:-92231400 MsaT039721.1:CDS
ATATGGATTCTTGTGGAACA+TGG 0.561084 7:-92242498 MsaT039721.1:CDS
GGGAAGCTGTGAGGACCCGA+TGG 0.561086 7:-92231369 MsaT039721.1:CDS
AAATGATGAAGTGTTGTCAT+GGG 0.565391 7:+92242632 None:intergenic
AGCGATTTCTGATCCTCTGA+AGG 0.565492 7:-92232995 MsaT039721.1:CDS
GACACCACACATGCCTCCTA+AGG 0.568201 7:-92243740 MsaT039721.1:intron
CACATTCCCACATGTACCCT+AGG 0.568981 7:+92232862 None:intergenic
GCCATCTGTTGAGAATATTG+AGG 0.570248 7:-92233217 MsaT039721.1:CDS
TTTGTTATAGCCACTAGGGA+TGG 0.575379 7:+92242673 None:intergenic
CATCTCAGGTTTAGTCGATG+TGG 0.575846 7:+92235382 None:intergenic
GTTACTCAAATTAGTTCCAA+AGG 0.576717 7:-92242530 MsaT039721.1:CDS
CACATCGACTAAACCTGAGA+TGG 0.577188 7:-92235381 MsaT039721.1:CDS
ACGGACAACCAACAGCAGAC+AGG 0.578818 7:+92230856 None:intergenic
GGAGTGCGAGATATGTATGC+AGG 0.580170 7:-92232590 MsaT039721.1:CDS
ATTTGGAAGAAGTATCTCGT+TGG 0.581237 7:-92232611 MsaT039721.1:CDS
GTCATGGGTTTGAGAGACAT+AGG 0.581509 7:-92246320 MsaT039721.1:CDS
GCTGCAACAAGCATTGGTAA+AGG 0.581987 7:-92230348 MsaT039721.1:CDS
AGCAACTGGGAAAGATCGTA+TGG 0.583285 7:-92243878 MsaT039721.1:CDS
AGTCAACAGAACATCTTCCT+GGG 0.584474 7:+92232642 None:intergenic
TGCTCAGTATTGAAGGGAGA+GGG 0.585190 7:-92231610 MsaT039721.1:CDS
CCATGAAGCAACCACTCAAG+AGG 0.586905 7:+92231472 None:intergenic
GGATAAGTGCATGCCTTCAG+AGG 0.587408 7:+92232982 None:intergenic
TCAAGTTTGTTATAGCCACT+AGG 0.587656 7:+92242668 None:intergenic
GACTACTGTGAGTACTACTA+GGG 0.587660 7:+92230466 None:intergenic
TCATTCAGCAATATCAAATG+AGG 0.587936 7:-92230406 MsaT039721.1:CDS
TATAGGAATAGAGCTCCAAA+TGG 0.588028 7:-92243802 MsaT039721.1:CDS
TGTAGGGATGAGAAAGACAT+TGG 0.588790 7:-92243830 MsaT039721.1:CDS
CATGGCGGTTTCCAGCTAGT+AGG 0.590626 7:+92233612 None:intergenic
AACAGCAAGGTGGCGTCCTG+AGG 0.591615 7:-92233946 MsaT039721.1:CDS
AGGGCTGTCAAAGGAAAGAA+GGG 0.592701 7:+92232906 None:intergenic
AGGAGAATTCTGCCTGTCCA+AGG 0.593390 7:+92230780 None:intergenic
AAAGGATGACAATGTTAAGT+CGG 0.595966 7:-92235414 MsaT039721.1:intron
GATGACATCAAAGTTAGGGA+TGG 0.596756 7:+92242716 None:intergenic
CTGCTCAGTATTGAAGGGAG+AGG 0.597882 7:-92231611 MsaT039721.1:CDS
GTAAAGGAAGTAATTCTGCT+GGG 0.598380 7:-92230332 MsaT039721.1:CDS
AGCTCTGATCTGCTGCGACG+CGG 0.599973 7:+92236175 None:intergenic
ACATTCCCACATGTACCCTA+GGG 0.600704 7:+92232863 None:intergenic
CTCCAAATGGTATCAAAACA+GGG 0.600706 7:-92243789 MsaT039721.1:CDS
CCTACCTGTGTTGTCAATGT+CGG 0.600822 7:+92236141 None:intergenic
TGCTGCGACGCGGTTATCTG+CGG 0.605013 7:+92236185 None:intergenic
TGGGATCAAACCTGATAGCA+AGG 0.606044 7:-92230313 MsaT039721.1:CDS
TACTGAATACACCGATACAC+TGG 0.607962 7:+92231583 None:intergenic
AGATTTGTGCACTACGGCCA+TGG 0.610861 7:-92235337 MsaT039721.1:CDS
TTGAGACTGAATTTAGGACC+AGG 0.613583 7:+92233351 None:intergenic
AAAGCTAAAGAGAAAATGGT+GGG 0.613758 7:-92230381 MsaT039721.1:CDS
GACATCAAAGTTAGGGATGG+AGG 0.613884 7:+92242719 None:intergenic
AGGCTCGGGCTCCTTGTCCG+TGG 0.615204 7:+92233440 None:intergenic
AAAAGAACCTATATTACAGT+CGG 0.616159 7:-92230589 MsaT039721.1:CDS
ATATTGAAGGAGATTCATCA+TGG 0.619903 7:+92242586 None:intergenic
TACTTCAACTAATAATGGGA+AGG 0.620636 7:-92233400 MsaT039721.1:CDS
CTCACCTTAGGAGGCATGTG+TGG 0.621337 7:+92243736 None:intergenic
GAGAGGGTATACCAGTGTAT+CGG 0.623299 7:-92231594 MsaT039721.1:CDS
AAATAGCCTAGAAGATGGTG+TGG 0.624894 7:-92242465 MsaT039721.1:CDS
GATGAAAGTAGCCACGGACA+AGG 0.625493 7:-92233451 MsaT039721.1:CDS
GCCATGGTTCACATATGTGA+AGG 0.625702 7:+92246180 None:intergenic
AAGACACACAAACTTGTCAT+CGG 0.626742 7:+92230830 None:intergenic
TTGTGGTTTCAACTGTTCTG+AGG 0.627086 7:-92231509 MsaT039721.1:CDS
GGAAGCTGTGAGGACCCGAT+GGG 0.628302 7:-92231368 MsaT039721.1:CDS
GCACCAAGTTCAGTATGCAC+CGG 0.628932 7:-92233523 MsaT039721.1:CDS
ACAAACTTGTCATCGGAGCA+CGG 0.629702 7:+92230837 None:intergenic
TTATCCTGCTCAGTATTGAA+GGG 0.633909 7:-92231616 MsaT039721.1:CDS
TCAGGAGTGAAAGTTTGAAG+AGG 0.636631 7:-92230974 MsaT039721.1:CDS
TCGACTAAACCTGAGATGGA+TGG 0.637166 7:-92235377 MsaT039721.1:CDS
GGAAGAGAACACTTTGTAGG+GGG 0.638236 7:+92234101 None:intergenic
TAGGTACCTCTTCTGTTGGA+CGG 0.638827 7:+92233886 None:intergenic
CAAAGGAAAGAAGGGAACCT+GGG 0.640625 7:+92232914 None:intergenic
TCTCAGGTTTAGTCGATGTG+GGG 0.642919 7:+92235384 None:intergenic
AAAAGTGATGAAAGTAGCCA+CGG 0.644146 7:-92233457 MsaT039721.1:CDS
GGTGAACCCAAAGTATGGTA+TGG 0.647828 7:-92232668 MsaT039721.1:CDS
ATGATGGATATGGATTCTTG+TGG 0.648298 7:-92242505 MsaT039721.1:CDS
AGATCCAAATAATAATAGCA+CGG 0.654615 7:-92242552 MsaT039721.1:CDS
ATAAACAGATTTGTGCACTA+CGG 0.655577 7:-92235343 MsaT039721.1:CDS
AGTACTACTAGGGATCCGCT+TGG 0.655954 7:+92230476 None:intergenic
GTTAGATCCAATCACACAAG+AGG 0.657130 7:-92243854 MsaT039721.1:CDS
AATGATGAAGTGTTGTCATG+GGG 0.659787 7:+92242633 None:intergenic
ATGATGAAGTGTTGTCATGG+GGG 0.660202 7:+92242634 None:intergenic
GCGGTTTCCAGCTAGTAGGA+GGG 0.665415 7:+92233616 None:intergenic
ACCTTCACATATGTGAACCA+TGG 0.672346 7:-92246181 MsaT039721.1:CDS
TGCACCGACATTGACAACAC+AGG 0.679889 7:-92236145 MsaT039721.1:intron
CAAAGCTAAAGAGAAAATGG+TGG 0.686433 7:-92230382 MsaT039721.1:CDS
AAATGGCCTCCCAAGCCAAG+CGG 0.688657 7:-92230491 MsaT039721.1:CDS
AATTACCAAACCATCCCTAG+TGG 0.692848 7:-92242683 MsaT039721.1:CDS
CCAGAGCAAGTGTAAAACTG+AGG 0.699405 7:-92235303 MsaT039721.1:CDS
TCTGGAACCAGGTAACAGCA+AGG 0.702176 7:-92233959 MsaT039721.1:intron
TAGTTCTTCAGAATCCGATG+AGG 0.708240 7:-92230163 MsaT039721.1:CDS
AATGGCATTACCCATCTGAG+AGG 0.718338 7:+92232832 None:intergenic
AAGACAAGAACAAACTCACG+AGG 0.728244 7:+92231559 None:intergenic
CAAATGGTATCAAAACAGGG+TGG 0.731036 7:-92243786 MsaT039721.1:CDS
GGATAAAATCGAAATCCAGG+AGG 0.731687 7:+92246287 None:intergenic
GAAGGTTAAAGACTGTGACA+AGG 0.732117 7:-92233382 MsaT039721.1:CDS
AAGCTAAAGAGAAAATGGTG+GGG 0.744347 7:-92230380 MsaT039721.1:CDS
GGAACCAGGTAACAGCAAGG+TGG 0.748113 7:-92233956 MsaT039721.1:intron
CATTCCCACATGTACCCTAG+GGG 0.752220 7:+92232864 None:intergenic
GAGCAGCTAGGGAAGCTGTG+AGG 0.761413 7:-92231378 MsaT039721.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 92230158 92246339 92230158 ID=MsaG039721
Chr7 mRNA 92230158 92246339 92230158 ID=MsaT039721.1;Parent=MsaG039721
Chr7 exon 92230158 92231003 92230158 ID=MsaT039721.1.exon14;Parent=MsaT039721.1
Chr7 CDS 92230158 92231003 92230158 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92231279 92231647 92231279 ID=MsaT039721.1.exon13;Parent=MsaT039721.1
Chr7 CDS 92231279 92231647 92231279 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92232565 92232735 92232565 ID=MsaT039721.1.exon12;Parent=MsaT039721.1
Chr7 CDS 92232565 92232735 92232565 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92232843 92233073 92232843 ID=MsaT039721.1.exon11;Parent=MsaT039721.1
Chr7 CDS 92232843 92233073 92232843 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92233173 92233712 92233173 ID=MsaT039721.1.exon10;Parent=MsaT039721.1
Chr7 CDS 92233173 92233712 92233173 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92233893 92233970 92233893 ID=MsaT039721.1.exon9;Parent=MsaT039721.1
Chr7 CDS 92233893 92233970 92233893 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92234055 92234126 92234055 ID=MsaT039721.1.exon8;Parent=MsaT039721.1
Chr7 CDS 92234055 92234126 92234055 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92235268 92235432 92235268 ID=MsaT039721.1.exon7;Parent=MsaT039721.1
Chr7 CDS 92235268 92235432 92235268 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92236146 92236214 92236146 ID=MsaT039721.1.exon6;Parent=MsaT039721.1
Chr7 CDS 92236146 92236214 92236146 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92241312 92241363 92241312 ID=MsaT039721.1.exon5;Parent=MsaT039721.1
Chr7 CDS 92241312 92241363 92241312 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92242242 92242294 92242242 ID=MsaT039721.1.exon4;Parent=MsaT039721.1
Chr7 CDS 92242242 92242294 92242242 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92242436 92242846 92242436 ID=MsaT039721.1.exon3;Parent=MsaT039721.1
Chr7 CDS 92242436 92242846 92242436 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92243741 92244006 92243741 ID=MsaT039721.1.exon2;Parent=MsaT039721.1
Chr7 CDS 92243741 92244006 92243741 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Chr7 exon 92246171 92246339 92246171 ID=MsaT039721.1.exon1;Parent=MsaT039721.1
Chr7 CDS 92246171 92246339 92246171 ID=cds.MsaT039721.1;Parent=MsaT039721.1
Gene Sequence

>MsaT039721.1

ATGGGTTTGAGAGACATAGGAGCTTCACTACCTCCTGGATTTCGATTTTATCCAAGTGATGAGGAATTGGTGTGTCACTATCTTTACAAAAAGATCACAAATGAGGAAGTTCTTAAGGGTACTTTGATTGAAATTGACCTTCACATATGTGAACCATGGCAGCTTCCAGAGGTGGCAAAGCTTAATGCAAATGAATGGTATTTCTTTAGCTTCCGGGACCGCAAATATGCAACTGGATTTAGAACAAACAGAGCAACTATATCTGGATATTGGAAAGCAACTGGGAAAGATCGTATGGTGTTAGATCCAATCACACAAGAGGTTGTAGGGATGAGAAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATCAAAACAGGGTGGATTATGCATGAATTTCGCTTAGAGACACCACACATGCCTCCTAAGGAGGACTGGGTATTGTGTAGAGTCTTTCACAAAAGCAAAGAAGAGAACAACAACAACAATAATAGTTCCAAACTCAACACACAACAATTCATGTATGAGACAACACCTCCATCCCTAACTTTGATGTCATCATCTCCAACAAATTACCAAACCATCCCTAGTGGCTATAACAAACTTGATTCTTTTTCTTCCCCCATGACAACACTTCATCATTTAAATCCAAACCAAAACAATTCTTCCATGATGAATCTCCTTCAATATTCTCGTGAAACAGATCCAAATAATAATAGCACGGTTACTCAAATTAGTTCCAAAGGTGATGATGGATATGGATTCTTGTGGAACATGGATTTGGAAGAAAATAGCCTAGAAGATGGTGTGGCTTCAGACTTGGATGCAATAAGATTTGAGCTTTTAGTGGCAAAGGCACATGCTAGATTGGGATTTGGTGTTTCAAGATTGGGGGAAATTTACTTAGAATGTTTGGTTTCAATGAAAAGTGGAAATAATGACGATGGCAACGCCGCAGATAACCGCGTCGCAGCAGATCAGAGCTTCGCTTCTGCACCGACATTGACAACACAGGATGACAATGTTAAGTCGGACCCAATCCCCACATCGACTAAACCTGAGATGGATGGCAATACTTCTAATAAACAGATTTGTGCACTACGGCCATGGATAATATCCGACCAGAGCAAGTGTAAAACTGAGGAATCTCGCACTGAGCATCCTCCTATGACTAAATTGAAACCCCCTACAAAGTGTTCTCTTCCAAAAGGGACCAAATATGGATGTCCAAAATGCAGTAATTGTTTTAAGGTAACAGCAAGGTGGCGTCCTGAGGATGCAAGAAGAGAAGTTCTGGAAGAAGCTCCTATTTTCCGTCCAACAGAAGAGGAATTCAAAGACACGATTAACTATATCGCAAGCATACGTTCCGAAGCAGAACCTTATGGAATTTGCCGTATTGTCCCTCCTACTAGCTGGAAACCGCCATGTACTCTTGAAAAAAAGAATGTATGGGAAAACTCTGAATTTATTGCTCAAATTCAGCGAATTGATGGGCACCAAGTTCAGTATGCACCGGAAGTTATGACTAGCTCTCATGATACTACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCACGGACAAGGAGCCCGAGCCTGAGCCTGGTCCTAAAAGTACTTCAACTAATAATGGGAAGGTTAAAGACTGTGACAAGGAGCCTGAGCCTGGTCCTAAATTCAGTCTCAAAACTTTTAAGAAATTGGCAGATGAATTCAAGATCCAGTACTTCAACTATAAGGATAAGAATAAGATTATGGGTTCTGGTAAAAATTCAGCCAGACATCAACAGCAATGGGAGCCATCTGTTGAGAATATTGAGGGTGAATACGGACGAATTGCTCAAAATCCAACTGATGAAATTGAGGTTCTCTGCTGTGACACTTTGGAGGCTGGAGATTTTAGCAGTGGATTTCCAATTCCAGCGATTTCTGATCCTCTGAAGGCATGCACTTATCCTGAATATTTAAAATCTGGATGGAACTTAAATAATATGCGTTCACTCCCAGGTTCCCTTCTTTCCTTTGACAGCCCTGAAGCTGCACAGAAATTTTCCCCTAGGGTACATGTGGGAATGTGCTTTTCACCTCTCAGATGGAAAGTTGAAGAGCACCAATTATACTCATTATATTACATGCATTTGGGTGAACCCAAAGTATGGTATGGTGTCCCAGGAAGATGTTCTGTTGACTTTGAAACAATTTGGAAGAAGTATCTCGTTGGAGTGCGAGATATGTATGCAGGACAGCCAGATATGCATGATAATCTGGTTATGCAGTTATCCTGCTCAGTATTGAAGGGAGAGGGTATACCAGTGTATCGGTGTATTCAGTATCCTCGTGAGTTTGTTCTTGTCTTTCCTGGAACATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAGGCAGCAAGTTTTGCTCCTCTTGAGTGGTTGCTTCATGGACAGAATGTTGTAGACCTATATAGTGAACAGAAGAGAAAAACTTTAATTTCATACGACAAGCTGTTACTGGGAGCAGCTAGGGAAGCTGTGAGGACCCGATGGGAAACCGATATATGTATGAAGAGCACACCCGACAACATAACATGTAAAGATGCCTATCAAAGAAATGGGATCTTGACAAAAGCTTTTAATTCTCGTATCAGGAGTGAAAGTTTGAAGAGGAAATTTATTTCCACTTCTTTGAAGTCACAAAAGATGGATGAAAACTTCACTGCCAGTTGTAAAAGGGAATGTAGCGTATGTCTGCGTGATTTATTCCTGTCTGCTGTTGGTTGTCCGTGCTCCGATGACAAGTTTGTGTGTCTTGATCATGCAAAACAGCTTTGTTCTTGTCCTTGGACAGGCAGAATTCTCCTTTACCGTTATGAAATCAGTGAATTGGAGGTTCTTCATCAAGCTTTGGATGGAAAACTAAGTGCAGTCTATAAATGGGCCAAAGAAGATCTTGGTTTAACTGTGCGCCCAGTTGCCTCCCAGAAATCAAAACAAACCCCAGAAAAAGTAAATGATTCAGAAGACTCGATAAAAGAACCTATATTACAGTCGGCGCGCGATGCATACAACAAGTGGAAACAGCGTAAATCGCAGGCAACACCAAATTCTTTGGTGGAGAAACAGAGCGAAATGGCCTCCCAAGCCAAGCGGATCCCTAGTAGTACTCACAGTAGTCCGTACGCCATTCACCCAAAAAAGAACACAACTTTACTTCATTCAGCAATATCAAATGAGGTCAAAGCTAAAGAGAAAATGGTGGGGCCCAAATCTGCTGCAACAAGCATTGGTAAAGGAAGTAATTCTGCTGGGATCAAACCTGATAGCAAGGCAATTGGGGATAAGCTCACAATTTCAAAGAAAGTAGGAGACCCAAAAGTTTCTGAAGTTTCTTCATCAACTCCAGGCTCACGTTTCTTGTCTTTACTACAAGAGAACATTTGGATTGATGTTTCATCTAGTTCTTCAGAATCCGATGAGGACTAG
Protein sequence

>MsaT039721.1

MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRMVLDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENNNNNNSSKLNTQQFMYETTPPSLTLMSSSPTNYQTIPSGYNKLDSFSSPMTTLHHLNPNQNNSSMMNLLQYSRETDPNNNSTVTQISSKGDDGYGFLWNMDLEENSLEDGVASDLDAIRFELLVAKAHARLGFGVSRLGEIYLECLVSMKSGNNDDGNAADNRVAADQSFASAPTLTTQDDNVKSDPIPTSTKPEMDGNTSNKQICALRPWIISDQSKCKTEESRTEHPPMTKLKPPTKCSLPKGTKYGCPKCSNCFKVTARWRPEDARREVLEEAPIFRPTEEEFKDTINYIASIRSEAEPYGICRIVPPTSWKPPCTLEKKNVWENSEFIAQIQRIDGHQVQYAPEVMTSSHDTTETKRRKVMKVATDKEPEPEPGPKSTSTNNGKVKDCDKEPEPGPKFSLKTFKKLADEFKIQYFNYKDKNKIMGSGKNSARHQQQWEPSVENIEGEYGRIAQNPTDEIEVLCCDTLEAGDFSSGFPIPAISDPLKACTYPEYLKSGWNLNNMRSLPGSLLSFDSPEAAQKFSPRVHVGMCFSPLRWKVEEHQLYSLYYMHLGEPKVWYGVPGRCSVDFETIWKKYLVGVRDMYAGQPDMHDNLVMQLSCSVLKGEGIPVYRCIQYPREFVLVFPGTYHSGFDCGFNCSEAASFAPLEWLLHGQNVVDLYSEQKRKTLISYDKLLLGAAREAVRTRWETDICMKSTPDNITCKDAYQRNGILTKAFNSRIRSESLKRKFISTSLKSQKMDENFTASCKRECSVCLRDLFLSAVGCPCSDDKFVCLDHAKQLCSCPWTGRILLYRYEISELEVLHQALDGKLSAVYKWAKEDLGLTVRPVASQKSKQTPEKVNDSEDSIKEPILQSARDAYNKWKQRKSQATPNSLVEKQSEMASQAKRIPSSTHSSPYAIHPKKNTTLLHSAISNEVKAKEKMVGPKSAATSIGKGSNSAGIKPDSKAIGDKLTISKKVGDPKVSEVSSSTPGSRFLSLLQENIWIDVSSSSSESDED*