AlfalfaGEDB | MsaG039793

M. sativa ssp. caerulea / MsaG039793

KEGG: -
GO: GO:0000156 GO:0000160 GO:0003674 GO:0003824 GO:0004721 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0080090 GO:0101006 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00072.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039793	XP_003625416.1	95.000	140	5	1	1	138	1	140	1.37e-88	264

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039793	sp\|F4JZT3\|ARR24_ARATH	59.167	120	48	1	13	131	11	130	2.17e-44	145

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039793	tr\|G7KYH3\|G7KYH3_MEDTR	95.000	140	5	1	1	138	1	140	6.54e-89	264

TFs/TRs:

Gene ID	Type	Classification
MsaG039793	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000117	MsaG039793	0.806247	1.529295e-49	2.387260e-47
MsaG000128	MsaG039793	0.812008	9.036236e-51	1.620823e-48
MsaG000198	MsaG039793	0.834613	4.929219e-56	1.632138e-53
MsaG000206	MsaG039793	0.849908	4.547091e-60	2.456580e-57
MsaG000308	MsaG039793	0.800606	2.228677e-48	3.054845e-46
MsaG000352	MsaG039793	0.852491	8.549074e-61	5.052097e-58
MsaG000514	MsaG039793	0.827704	2.411890e-54	6.541159e-52
MsaG000550	MsaG039793	0.800422	2.428617e-48	3.315086e-46
MsaG000665	MsaG039793	0.816032	1.181804e-51	2.345032e-49
MsaG000759	MsaG039793	0.842770	3.931943e-58	1.675966e-55
MsaG001660	MsaG039793	0.870075	3.900945e-66	4.535196e-63
MsaG001911	MsaG039793	0.802589	8.773048e-49	1.257944e-46
MsaG003161	MsaG039793	0.831046	3.755118e-55	1.119820e-52
MsaG003327	MsaG039793	0.826679	4.234598e-54	1.115947e-51
MsaG003423	MsaG039793	0.802027	1.143757e-48	1.618987e-46
MsaG003529	MsaG039793	0.821455	7.032846e-53	1.607459e-50
MsaG003728	MsaG039793	0.827382	2.879034e-54	7.737902e-52
MsaG003901	MsaG039793	0.839111	3.550021e-57	1.347789e-54
MsaG003912	MsaG039793	0.832032	2.152117e-55	6.605273e-53
MsaG003964	MsaG039793	0.846604	3.684243e-59	1.780280e-56
MsaG004271	MsaG039793	0.862985	6.817940e-64	5.947296e-61
MsaG004290	MsaG039793	0.844928	1.045132e-58	4.778790e-56
MsaG004370	MsaG039793	0.806567	1.309811e-49	2.060175e-47
MsaG004361	MsaG039793	0.827480	2.729448e-54	7.355600e-52
MsaG004427	MsaG039793	0.815637	1.445978e-51	2.840715e-49
MsaG004431	MsaG039793	0.814124	3.120512e-51	5.900647e-49
MsaG004544	MsaG039793	0.831178	3.487056e-55	1.043803e-52
MsaG004648	MsaG039793	0.803825	4.883136e-49	7.204008e-47
MsaG004744	MsaG039793	0.807775	7.290533e-50	1.180030e-47
MsaG004745	MsaG039793	0.809946	2.514488e-50	4.288422e-48
MsaG004801	MsaG039793	0.813955	3.398200e-51	6.398796e-49
MsaG004937	MsaG039793	0.821123	8.382533e-53	1.899218e-50
MsaG004939	MsaG039793	0.803353	6.109550e-49	8.915696e-47
MsaG004990	MsaG039793	0.811014	1.482224e-50	2.594613e-48
MsaG005273	MsaG039793	0.874852	1.010873e-67	1.444582e-64
MsaG005276	MsaG039793	0.831046	3.755118e-55	1.119820e-52
MsaG005289	MsaG039793	0.807574	8.038177e-50	1.294753e-47
MsaG005354	MsaG039793	0.806958	1.083957e-49	1.720631e-47
MsaG005584	MsaG039793	0.819308	2.174223e-52	4.695429e-50
MsaG005827	MsaG039793	0.811588	1.114374e-50	1.978345e-48
MsaG005770	MsaG039793	0.834699	4.692007e-56	1.557578e-53
MsaG006339	MsaG039793	0.827905	2.159601e-54	5.890043e-52
MsaG006350	MsaG039793	0.833996	7.027954e-56	2.284386e-53
MsaG006423	MsaG039793	0.852026	1.157709e-60	6.731803e-58
MsaG006430	MsaG039793	0.801749	1.303960e-48	1.834144e-46
MsaG006440	MsaG039793	0.830843	4.209412e-55	1.247971e-52
MsaG006469	MsaG039793	0.817724	4.951397e-52	1.026098e-49
MsaG006590	MsaG039793	0.824589	1.317993e-53	3.278270e-51
MsaG006558	MsaG039793	0.822600	3.829694e-53	9.025602e-51
MsaG006736	MsaG039793	0.835994	2.216583e-56	7.649006e-54
MsaG006889	MsaG039793	0.817822	4.705809e-52	9.777299e-50
MsaG006898	MsaG039793	0.818942	2.630585e-52	5.626722e-50
MsaG006942	MsaG039793	0.809761	2.754949e-50	4.677584e-48
MsaG006988	MsaG039793	0.815938	1.240358e-51	2.455383e-49
MsaG007537	MsaG039793	0.815535	1.523390e-51	2.984953e-49
MsaG007543	MsaG039793	0.814658	2.380876e-51	4.562755e-49
MsaG007565	MsaG039793	0.825174	9.605736e-54	2.427913e-51
MsaG007568	MsaG039793	0.821989	5.299336e-53	1.228593e-50
MsaG007600	MsaG039793	0.815442	1.597595e-51	3.123018e-49
MsaG007652	MsaG039793	0.809462	3.191768e-50	5.380497e-48
MsaG007655	MsaG039793	0.815931	1.244416e-51	2.463003e-49
MsaG008069	MsaG039793	0.804303	3.888656e-49	5.800978e-47
MsaG008166	MsaG039793	0.819498	1.968430e-52	4.272227e-50
MsaG008250	MsaG039793	0.807854	7.014460e-50	1.137532e-47
MsaG009179	MsaG039793	0.845613	6.836407e-59	3.196656e-56
MsaG009781	MsaG039793	0.841693	7.558028e-58	3.112240e-55
MsaG009787	MsaG039793	0.811717	1.044975e-50	1.860999e-48
MsaG010213	MsaG039793	0.824430	1.435557e-53	3.555391e-51
MsaG010328	MsaG039793	0.806069	1.666085e-49	2.589797e-47
MsaG010768	MsaG039793	0.820473	1.180813e-52	2.629739e-50
MsaG011018	MsaG039793	0.806218	1.550637e-49	2.418959e-47
MsaG011405	MsaG039793	0.813875	3.539206e-51	6.650863e-49
MsaG011468	MsaG039793	0.851699	1.431989e-60	8.230277e-58
MsaG011586	MsaG039793	0.803491	5.722101e-49	8.376822e-47
MsaG011605	MsaG039793	0.836263	1.894778e-56	6.592349e-54
MsaG011783	MsaG039793	0.859393	8.363423e-63	6.354477e-60
MsaG011997	MsaG039793	0.807468	8.463536e-50	1.359833e-47
MsaG012023	MsaG039793	0.830178	6.113344e-55	1.778258e-52
MsaG012169	MsaG039793	0.808379	5.429026e-50	8.915695e-48
MsaG012204	MsaG039793	0.834893	4.194880e-56	1.400641e-53
MsaG012289	MsaG039793	0.833467	9.514135e-56	3.044945e-53
MsaG041926	MsaG039793	0.815184	1.822057e-51	3.538622e-49
MsaG042222	MsaG039793	0.846626	3.634505e-59	1.757482e-56
MsaG042241	MsaG039793	0.828137	1.899638e-54	5.215020e-52
MsaG042321	MsaG039793	0.817999	4.292571e-52	8.959704e-50
MsaG042327	MsaG039793	0.847812	1.725120e-59	8.681941e-57
MsaG042557	MsaG039793	0.823121	2.899576e-53	6.930433e-51
MsaG042700	MsaG039793	0.811052	1.454709e-50	2.548852e-48
MsaG043133	MsaG039793	0.804010	4.470185e-49	6.623452e-47
MsaG043225	MsaG039793	0.857160	3.837523e-62	2.682012e-59
MsaG043506	MsaG039793	0.800192	2.702616e-48	3.669924e-46
MsaG043571	MsaG039793	0.827715	2.398358e-54	6.506337e-52
MsaG044227	MsaG039793	0.813316	4.689722e-51	8.690089e-49
MsaG044863	MsaG039793	0.833021	1.227153e-55	3.876139e-53
MsaG045179	MsaG039793	0.843235	2.960761e-58	1.280916e-55
MsaG045285	MsaG039793	0.840359	1.686356e-57	6.657797e-55
MsaG045732	MsaG039793	0.819348	2.128306e-52	4.601367e-50
MsaG045788	MsaG039793	0.801530	1.444966e-48	2.022393e-46
MsaG045873	MsaG039793	0.837432	9.565173e-57	3.447730e-54
MsaG045917	MsaG039793	0.807700	7.562064e-50	1.221783e-47
MsaG045950	MsaG039793	0.807067	1.028363e-49	1.636587e-47
MsaG045974	MsaG039793	0.806247	1.529295e-49	2.387260e-47
MsaG045997	MsaG039793	0.813495	4.285780e-51	7.977190e-49
MsaG045984	MsaG039793	0.810779	1.665554e-50	2.898855e-48
MsaG046247	MsaG039793	0.824968	1.073699e-53	2.698524e-51
MsaG046268	MsaG039793	0.826704	4.175834e-54	1.101264e-51
MsaG046277	MsaG039793	0.835533	2.897037e-56	9.860158e-54
MsaG046470	MsaG039793	0.836315	1.839203e-56	6.408597e-54
MsaG046473	MsaG039793	0.809596	2.987887e-50	5.053008e-48
MsaG046936	MsaG039793	0.810589	1.830283e-50	3.170774e-48
MsaG047118	MsaG039793	0.840478	1.570476e-57	6.223417e-55
MsaG047160	MsaG039793	0.801363	1.562782e-48	2.179045e-46
MsaG047135	MsaG039793	0.843913	1.954127e-58	8.640059e-56
MsaG002231	MsaG039793	0.830419	5.341851e-55	1.564577e-52
MsaG002466	MsaG039793	0.804064	4.357961e-49	6.465288e-47
MsaG002575	MsaG039793	0.827430	2.805224e-54	7.549358e-52
MsaG001460	MsaG039793	0.809546	3.062067e-50	5.172271e-48
MsaG001947	MsaG039793	0.818454	3.390668e-52	7.160507e-50
MsaG002307	MsaG039793	0.827878	2.191772e-54	5.973269e-52
MsaG009633	MsaG039793	0.861705	1.679244e-63	1.393251e-60
MsaG007871	MsaG039793	0.805085	2.675004e-49	4.063449e-47
MsaG008766	MsaG039793	0.810897	1.571249e-50	2.742547e-48
MsaG013586	MsaG039793	0.822862	3.330448e-53	7.904910e-51
MsaG011837	MsaG039793	0.806917	1.105647e-49	1.753362e-47
MsaG013008	MsaG039793	0.805175	2.561430e-49	3.899183e-47
MsaG016152	MsaG039793	0.831828	2.416018e-55	7.371397e-53
MsaG017401	MsaG039793	0.803297	6.274729e-49	9.144717e-47
MsaG012156	MsaG039793	0.804983	2.807901e-49	4.255293e-47
MsaG014865	MsaG039793	0.831077	3.690892e-55	1.101618e-52
MsaG012735	MsaG039793	0.830316	5.659047e-55	1.652587e-52
MsaG021945	MsaG039793	0.829806	7.524685e-55	2.165573e-52
MsaG024279	MsaG039793	0.829382	9.531059e-55	2.709848e-52
MsaG023443	MsaG039793	0.810088	2.344534e-50	4.012369e-48
MsaG019319	MsaG039793	0.820029	1.490328e-52	3.280401e-50
MsaG019753	MsaG039793	0.811636	1.087745e-50	1.933336e-48
MsaG027101	MsaG039793	0.822776	3.486098e-53	8.255309e-51
MsaG029395	MsaG039793	0.830770	4.385163e-55	1.297365e-52
MsaG027109	MsaG039793	0.803567	5.520797e-49	8.096232e-47
MsaG032460	MsaG039793	0.847489	2.115058e-59	1.052861e-56
MsaG031626	MsaG039793	0.805086	2.673669e-49	4.061502e-47
MsaG033433	MsaG039793	0.830883	4.116770e-55	1.221913e-52
MsaG034520	MsaG039793	0.843021	3.372702e-58	1.449198e-55
MsaG032451	MsaG039793	0.810577	1.840733e-50	3.187984e-48
MsaG031649	MsaG039793	0.843951	1.908671e-58	8.449150e-56
MsaG031628	MsaG039793	0.824805	1.172949e-53	2.934801e-51
MsaG030000	MsaG039793	0.823716	2.107860e-53	5.120330e-51
MsaG031699	MsaG039793	0.840207	1.847030e-57	7.257080e-55
MsaG034989	MsaG039793	0.841044	1.117910e-57	4.509663e-55
MsaG040619	MsaG039793	0.821217	7.974273e-53	1.811259e-50
MsaG038711	MsaG039793	0.808049	6.377006e-50	1.039002e-47
MsaG036540	MsaG039793	0.800432	2.417059e-48	3.300048e-46
MsaG036936	MsaG039793	0.804798	3.068379e-49	4.630033e-47
MsaG040778	MsaG039793	0.826478	4.725189e-54	1.238356e-51
MsaG037024	MsaG039793	0.821852	5.698009e-53	1.316209e-50
MsaG035918	MsaG039793	0.821192	8.082635e-53	1.834657e-50
MsaG036732	MsaG039793	0.826226	5.420869e-54	1.410683e-51
MsaG037888	MsaG039793	0.800594	2.240683e-48	3.070490e-46
MsaG039793	MsaG036743	0.835749	2.556041e-56	8.755607e-54
MsaG039793	MsaG038223	0.832818	1.377674e-55	4.325658e-53
MsaG039793	MsaG044907	0.809061	3.887085e-50	6.489454e-48
MsaG039793	MsaG043681	0.824467	1.407167e-53	3.488599e-51
MsaG039793	MsaG043534	0.824857	1.140209e-53	2.857006e-51
MsaG039793	MsaG044529	0.810277	2.135467e-50	3.671465e-48
MsaG039793	MsaG042078	0.801133	1.741075e-48	2.414993e-46
MsaG039793	MsaG047040	0.801007	1.847357e-48	2.555101e-46
MsaG012778	MsaG039793	0.825590	7.663567e-54	1.959308e-51
MsaG013245	MsaG039793	0.806300	1.490190e-49	2.329160e-47
MsaG013338	MsaG039793	0.816263	1.049845e-51	2.095542e-49
MsaG013321	MsaG039793	0.847710	1.840037e-59	9.227680e-57
MsaG013849	MsaG039793	0.822233	4.655028e-53	1.086278e-50
MsaG013916	MsaG039793	0.802690	8.367169e-49	1.202481e-46
MsaG014078	MsaG039793	0.813225	4.910150e-51	9.078136e-49
MsaG014194	MsaG039793	0.810092	2.340102e-50	4.005174e-48
MsaG014215	MsaG039793	0.841831	6.952938e-58	2.875726e-55
MsaG014368	MsaG039793	0.854757	1.921369e-61	1.230554e-58
MsaG014542	MsaG039793	0.853832	3.544211e-61	2.196224e-58
MsaG014725	MsaG039793	0.827449	2.775836e-54	7.474270e-52
MsaG015294	MsaG039793	0.835179	3.555704e-56	1.197386e-53
MsaG015623	MsaG039793	0.800003	2.952581e-48	3.992419e-46
MsaG015807	MsaG039793	0.822985	3.117200e-53	7.423540e-51
MsaG015844	MsaG039793	0.802799	7.945542e-49	1.144727e-46
MsaG016078	MsaG039793	0.806375	1.437807e-49	2.251217e-47
MsaG017088	MsaG039793	0.807633	7.811605e-50	1.260030e-47
MsaG017105	MsaG039793	0.827658	2.473725e-54	6.700165e-52
MsaG017354	MsaG039793	0.837349	1.004290e-56	3.610520e-54
MsaG017376	MsaG039793	0.818015	4.258625e-52	8.892356e-50
MsaG017464	MsaG039793	0.858325	1.738791e-62	1.269126e-59
MsaG017473	MsaG039793	0.847625	1.940516e-59	9.703572e-57
MsaG017589	MsaG039793	0.832246	1.907049e-55	5.888959e-53
MsaG017614	MsaG039793	0.809065	3.879782e-50	6.477816e-48
MsaG018103	MsaG039793	0.816823	7.877267e-52	1.595050e-49
MsaG018135	MsaG039793	0.843711	2.211750e-58	9.716472e-56
MsaG018190	MsaG039793	0.815074	1.926826e-51	3.731622e-49
MsaG018212	MsaG039793	0.805144	2.599377e-49	3.954098e-47
MsaG018240	MsaG039793	0.824889	1.120691e-53	2.810548e-51
MsaG018263	MsaG039793	0.819847	1.640080e-52	3.592400e-50
MsaG018465	MsaG039793	0.813076	5.291878e-51	9.747525e-49
MsaG018417	MsaG039793	0.824087	1.727395e-53	4.238317e-51
MsaG018560	MsaG039793	0.852965	6.269595e-61	3.767599e-58
MsaG018655	MsaG039793	0.802862	7.713613e-49	1.112908e-46
MsaG019018	MsaG039793	0.804007	4.476274e-49	6.631994e-47
MsaG019084	MsaG039793	0.808965	4.074162e-50	6.786029e-48
MsaG019159	MsaG039793	0.832457	1.692052e-55	5.257230e-53
MsaG019215	MsaG039793	0.801214	1.676610e-48	2.329767e-46
MsaG019221	MsaG039793	0.815979	1.214693e-51	2.407053e-49
MsaG019287	MsaG039793	0.815893	1.269042e-51	2.509277e-49
MsaG019354	MsaG039793	0.810199	2.220058e-50	3.809563e-48
MsaG019422	MsaG039793	0.814416	2.690957e-51	5.126024e-49
MsaG020062	MsaG039793	0.834153	6.421829e-56	2.097193e-53
MsaG020296	MsaG039793	0.815713	1.391389e-51	2.738660e-49
MsaG020402	MsaG039793	0.861527	1.903250e-63	1.568332e-60
MsaG020566	MsaG039793	0.840072	2.002839e-57	7.836029e-55
MsaG020616	MsaG039793	0.822924	3.220982e-53	7.657878e-51
MsaG020787	MsaG039793	0.826948	3.653711e-54	9.701347e-52
MsaG021973	MsaG039793	0.835020	3.896599e-56	1.306052e-53
MsaG022116	MsaG039793	0.851272	1.888343e-60	1.069329e-57
MsaG022227	MsaG039793	0.832782	1.406009e-55	4.410219e-53
MsaG022437	MsaG039793	0.803587	5.467423e-49	8.021749e-47
MsaG023153	MsaG039793	0.814695	2.336531e-51	4.481984e-49
MsaG023396	MsaG039793	0.841737	7.356442e-58	3.033501e-55
MsaG023474	MsaG039793	0.850231	3.695448e-60	2.018595e-57
MsaG023570	MsaG039793	0.816863	7.718792e-52	1.564536e-49
MsaG023609	MsaG039793	0.831281	3.289613e-55	9.876541e-53
MsaG023680	MsaG039793	0.802743	8.159667e-49	1.174066e-46
MsaG023753	MsaG039793	0.844525	1.341015e-58	6.049113e-56
MsaG023991	MsaG039793	0.820723	1.035028e-52	2.320256e-50
MsaG024271	MsaG039793	0.808227	5.847592e-50	9.568129e-48
MsaG027243	MsaG039793	0.845125	9.253340e-59	4.257446e-56
MsaG027292	MsaG039793	0.803826	4.880168e-49	7.199851e-47
MsaG027416	MsaG039793	0.826085	5.856475e-54	1.518143e-51
MsaG027749	MsaG039793	0.867612	2.425782e-65	2.547052e-62
MsaG028142	MsaG039793	0.817658	5.120988e-52	1.059456e-49
MsaG028250	MsaG039793	0.802658	8.491585e-49	1.219516e-46
MsaG028263	MsaG039793	0.813171	5.046249e-51	9.316873e-49
MsaG028487	MsaG039793	0.818864	2.739538e-52	5.847667e-50
MsaG028488	MsaG039793	0.823950	1.859141e-53	4.544598e-51
MsaG028688	MsaG039793	0.816828	7.856923e-52	1.591129e-49
MsaG028713	MsaG039793	0.811635	1.088437e-50	1.934508e-48
MsaG028862	MsaG039793	0.861855	1.512193e-63	1.261907e-60
MsaG028937	MsaG039793	0.818117	4.038999e-52	8.455856e-50
MsaG028908	MsaG039793	0.807156	9.847024e-50	1.570417e-47
MsaG028990	MsaG039793	0.811513	1.157001e-50	2.050191e-48
MsaG029132	MsaG039793	0.867086	3.567707e-65	3.666774e-62
MsaG029232	MsaG039793	0.807279	9.277890e-50	1.483956e-47
MsaG029360	MsaG039793	0.820202	1.361388e-52	3.010377e-50
MsaG029361	MsaG039793	0.841005	1.143990e-57	4.609187e-55
MsaG029470	MsaG039793	0.816165	1.104101e-51	2.198336e-49
MsaG030267	MsaG039793	0.839407	2.976560e-57	1.140523e-54
MsaG030331	MsaG039793	0.832099	2.072647e-55	6.373665e-53
MsaG030510	MsaG039793	0.812796	6.090148e-51	1.113956e-48
MsaG030548	MsaG039793	0.800812	2.023134e-48	2.786039e-46
MsaG030804	MsaG039793	0.812123	8.531830e-51	1.534648e-48
MsaG032716	MsaG039793	0.808502	5.113048e-50	8.421799e-48
MsaG032815	MsaG039793	0.804801	3.064403e-49	4.624411e-47
MsaG033134	MsaG039793	0.819586	1.879770e-52	4.089076e-50
MsaG033540	MsaG039793	0.808707	4.623416e-50	7.653421e-48
MsaG034220	MsaG039793	0.800576	2.259485e-48	3.095016e-46
MsaG034605	MsaG039793	0.808737	4.557361e-50	7.549434e-48
MsaG034861	MsaG039793	0.800001	2.954338e-48	3.994690e-46
MsaG035051	MsaG039793	0.827356	2.921777e-54	7.846686e-52
MsaG035190	MsaG039793	0.848232	1.322580e-59	6.749727e-57
MsaG035238	MsaG039793	0.803464	5.795487e-49	8.479022e-47
MsaG036426	MsaG039793	0.843057	3.299881e-58	1.419529e-55
MsaG036429	MsaG039793	0.841607	7.959272e-58	3.268645e-55
MsaG036444	MsaG039793	0.848521	1.101411e-59	5.675525e-57
MsaG036642	MsaG039793	0.815529	1.528362e-51	2.994214e-49
MsaG038528	MsaG039793	0.801688	1.342108e-48	1.885166e-46
MsaG039946	MsaG039793	0.854699	1.997839e-61	1.276853e-58
MsaG040474	MsaG039793	0.803022	7.147488e-49	1.035085e-46
MsaG040909	MsaG039793	0.811532	1.146013e-50	2.031681e-48
MsaG041572	MsaG039793	0.800685	2.147680e-48	2.949149e-46
MsaG041703	MsaG039793	0.836912	1.297272e-56	4.602286e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039793	MtrunA17_Chr7g0262351	95.000	140	5	1	1	138	1	140	1.26e-92	264
MsaG039793	MtrunA17_Chr8g0364781	58.594	128	50	1	14	138	6	133	1.31e-43	140
MsaG039793	MtrunA17_Chr6g0472261	78.947	76	16	0	11	86	1	76	9.17e-38	123
MsaG039793	MtrunA17_Chr7g0262671	58.025	81	34	0	12	92	3	83	2.75e-28	100
MsaG039793	MtrunA17_Chr6g0451941	32.743	113	75	1	12	123	25	137	2.53e-16	70.9
MsaG039793	MtrunA17_Chr7g0262681	54.098	61	27	1	78	137	5	65	1.09e-12	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039793	AT5G26594.1	59.167	120	48	1	13	131	11	130	2.21e-45	145
MsaG039793	AT3G04280.1	47.934	121	56	3	20	133	22	142	6.42e-29	103
MsaG039793	AT3G04280.2	47.934	121	56	3	20	133	22	142	6.42e-29	103
MsaG039793	AT3G04280.3	47.934	121	56	3	20	133	22	142	6.42e-29	103

Find 28 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAATGGAACCTCAAAATTC+AGG	0.370359	7:-93136043	MsaT039793.1:CDS
TAACATCATTCTCATGGATA+AGG	0.382325	7:-93135876	MsaT039793.1:CDS
AGGGAAAGGGAAAGGGATAA+TGG	0.389184	7:-93136059	MsaT039793.1:CDS
ACCCATCGATCGCAGTTTCT+TGG	0.391435	7:+93135646	None:intergenic
AAACAAGAATTTATGGAAGC+AGG	0.424926	7:-93135578	MsaT039793.1:CDS
AAGGAAATGCCTATCATGAA+TGG	0.455972	7:-93135857	MsaT039793.1:CDS
AAATGGAAGATCAAGGGAAA+GGG	0.458192	7:-93136072	MsaT039793.1:CDS
AAGATTTAACATCATTCTCA+TGG	0.473978	7:-93135882	MsaT039793.1:CDS
ACCTCAATCCCATTCATGAT+AGG	0.485829	7:+93135848	None:intergenic
TTAAGCACACCAATGGTCAA+TGG	0.495806	7:+93135533	None:intergenic
TTGTACAAAATGGAAGATCA+AGG	0.500428	7:-93136079	None:intergenic
AAGATCAAGGGAAAGGGAAA+GGG	0.503589	7:-93136066	MsaT039793.1:CDS
AGGAAATGCCTATCATGAAT+GGG	0.507526	7:-93135856	MsaT039793.1:CDS
TAAATCTTTGACCATTGCAA+TGG	0.518192	7:+93135897	None:intergenic
AACAAGAATTTATGGAAGCA+GGG	0.519897	7:-93135577	MsaT039793.1:CDS
GCCTATCATGAATGGGATTG+AGG	0.520152	7:-93135849	MsaT039793.1:intron
GAAGATCAAGGGAAAGGGAA+AGG	0.522711	7:-93136067	MsaT039793.1:CDS
AACCAAGAAACTGCGATCGA+TGG	0.533042	7:-93135648	MsaT039793.1:CDS
CTTGTTCGAATGATTCATCA+AGG	0.541897	7:-93135983	MsaT039793.1:CDS
CAAGGTCTATTGAAAAGAGC+TGG	0.545224	7:-93135965	MsaT039793.1:CDS
ACCAAGAAACTGCGATCGAT+GGG	0.549417	7:-93135647	MsaT039793.1:CDS
CAAGTGAAACCATTGACCAT+TGG	0.555088	7:-93135542	MsaT039793.1:CDS
GGTATCCGTAGCATGATTGT+TGG	0.563539	7:-93135626	MsaT039793.1:CDS
AAAATGGAAGATCAAGGGAA+AGG	0.568166	7:-93136073	MsaT039793.1:CDS
ACACACCAACAATCATGCTA+CGG	0.608934	7:+93135621	None:intergenic
TGTACAAAATGGAAGATCAA+GGG	0.616219	7:-93136078	None:intergenic
AATCGAATTAAGCACACCAA+TGG	0.617947	7:+93135526	None:intergenic
GCTGTAGATATCCATTGCAA+TGG	0.620859	7:-93135908	MsaT039793.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	93135499	93136092	93135499	ID=MsaG039793
Chr7	mRNA	93135499	93136092	93135499	ID=MsaT039793.1;Parent=MsaG039793
Chr7	exon	93135499	93135672	93135499	ID=MsaT039793.1.exon2;Parent=MsaT039793.1
Chr7	CDS	93135499	93135672	93135499	ID=cds.MsaT039793.1;Parent=MsaT039793.1
Chr7	exon	93135850	93136092	93135850	ID=MsaT039793.1.exon1;Parent=MsaT039793.1
Chr7	CDS	93135850	93136092	93135850	ID=cds.MsaT039793.1;Parent=MsaT039793.1

Gene Sequence

>MsaT039793.1

ATGGAAGATCAAGGGAAAGGGAAAGGGATAATGGAACCTCAAAATTCAGGAACTGAATTAACAGCACTTATTGTAGATGATGATAAGCTTGTTCGAATGATTCATCAAGGTCTATTGAAAAGAGCTGGTGTGAAAAGTGAAGCTGTAAAAAATGGTAAAGAAGCTGTAGATATCCATTGCAATGGTCAAAGATTTAACATCATTCTCATGGATAAGGAAATGCCTATCATGAATGGGATTGAGGCAACCAAGAAACTGCGATCGATGGGTATCCGTAGCATGATTGTTGGTGTGTCATCGTGTACTGAAGCAGAAAAACAAGAATTTATGGAAGCAGGGCTAAATGATTATCAAGTGAAACCATTGACCATTGGTGTGCTTAATTCGATTCTTGATGCTGTTAAAGCTAGCAAGTAG

Protein sequence

>MsaT039793.1

MEDQGKGKGIMEPQNSGTELTALIVDDDKLVRMIHQGLLKRAGVKSEAVKNGKEAVDIHCNGQRFNIILMDKEMPIMNGIEATKKLRSMGIRSMIVGVSSCTEAEKQEFMEAGLNDYQVKPLTIGVLNSILDAVKASK*