AlfalfaGEDB | MsaG039921

M. sativa ssp. caerulea / MsaG039921

KEGG: -
GO: -
PFAM: PF04689.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039921	XP_013449980.1	100.000	73	0	0	1	73	1	73	8.19e-43	143

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039921	sp\|Q7XLX6\|S1FA2_ORYSJ	65.000	80	21	1	1	73	1	80	7.37e-15	65.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039921	tr\|A0A072U4F5\|A0A072U4F5_MEDTR	100.000	73	0	0	1	73	1	73	3.91e-43	143

TFs/TRs:

Gene ID	Type	Classification
MsaG039921	TF	S1Fa-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000004	MsaG039921	0.811317	1.275194e-50	2.248892e-48
MsaG000210	MsaG039921	0.850090	4.045421e-60	2.199027e-57
MsaG000180	MsaG039921	0.834902	4.173286e-56	1.393792e-53
MsaG000225	MsaG039921	0.803882	4.751313e-49	7.018843e-47
MsaG000326	MsaG039921	0.825183	9.555844e-54	2.415913e-51
MsaG000405	MsaG039921	0.815902	1.263063e-51	2.498053e-49
MsaG000431	MsaG039921	0.810333	2.077294e-50	3.576463e-48
MsaG000640	MsaG039921	0.823600	2.243513e-53	5.432638e-51
MsaG000646	MsaG039921	0.830328	5.620619e-55	1.641969e-52
MsaG000683	MsaG039921	0.840165	1.894206e-57	7.432796e-55
MsaG000687	MsaG039921	0.818190	3.889381e-52	8.157916e-50
MsaG000978	MsaG039921	0.838327	5.646820e-57	2.092034e-54
MsaG001009	MsaG039921	0.822248	4.617239e-53	1.077913e-50
MsaG001279	MsaG039921	0.816604	8.814130e-52	1.774711e-49
MsaG001432	MsaG039921	0.816414	9.717703e-52	1.947133e-49
MsaG002015	MsaG039921	0.897533	2.915928e-76	1.294412e-72
MsaG002027	MsaG039921	0.811065	1.445089e-50	2.532828e-48
MsaG002715	MsaG039921	0.801686	1.343295e-48	1.886767e-46
MsaG002866	MsaG039921	0.800337	2.526892e-48	3.442532e-46
MsaG003180	MsaG039921	0.849249	6.930610e-60	3.661358e-57
MsaG003214	MsaG039921	0.801528	1.446701e-48	2.024702e-46
MsaG003402	MsaG039921	0.838316	5.683694e-57	2.104980e-54
MsaG003514	MsaG039921	0.842987	3.443082e-58	1.477892e-55
MsaG003918	MsaG039921	0.800256	2.623373e-48	3.567494e-46
MsaG004039	MsaG039921	0.845760	6.239644e-59	2.931825e-56
MsaG004373	MsaG039921	0.814225	2.964999e-51	5.621000e-49
MsaG004500	MsaG039921	0.805836	1.864439e-49	2.882219e-47
MsaG004517	MsaG039921	0.804345	3.810677e-49	5.690236e-47
MsaG004534	MsaG039921	0.833558	9.029921e-56	2.897704e-53
MsaG004621	MsaG039921	0.867676	2.315107e-65	2.437178e-62
MsaG004890	MsaG039921	0.809590	2.997798e-50	5.069031e-48
MsaG005000	MsaG039921	0.812766	6.185151e-51	1.130457e-48
MsaG005114	MsaG039921	0.859932	5.766791e-63	4.471933e-60
MsaG005305	MsaG039921	0.801638	1.373495e-48	1.927109e-46
MsaG005435	MsaG039921	0.810529	1.885605e-50	3.261916e-48
MsaG005438	MsaG039921	0.808990	4.024091e-50	6.706756e-48
MsaG005506	MsaG039921	0.811038	1.465126e-50	2.566205e-48
MsaG005642	MsaG039921	0.805374	2.327770e-49	3.559844e-47
MsaG005660	MsaG039921	0.841166	1.038340e-57	4.205093e-55
MsaG005774	MsaG039921	0.813800	3.674202e-51	6.891816e-49
MsaG005806	MsaG039921	0.848516	1.104813e-59	5.692097e-57
MsaG005813	MsaG039921	0.842432	4.827405e-58	2.035558e-55
MsaG006046	MsaG039921	0.809811	2.688125e-50	4.569700e-48
MsaG006331	MsaG039921	0.806514	1.344350e-49	2.111813e-47
MsaG006468	MsaG039921	0.802859	7.722197e-49	1.114092e-46
MsaG006936	MsaG039921	0.823482	2.389571e-53	5.767582e-51
MsaG007326	MsaG039921	0.825749	7.028195e-54	1.804908e-51
MsaG007381	MsaG039921	0.825355	8.708631e-54	2.212135e-51
MsaG007353	MsaG039921	0.841076	1.096436e-57	4.427742e-55
MsaG007846	MsaG039921	0.812875	5.854210e-51	1.072922e-48
MsaG007744	MsaG039921	0.848836	9.013688e-60	4.694826e-57
MsaG007833	MsaG039921	0.846553	3.805247e-59	1.835576e-56
MsaG007834	MsaG039921	0.853561	4.237908e-61	2.600733e-58
MsaG008017	MsaG039921	0.801492	1.471212e-48	2.057322e-46
MsaG008218	MsaG039921	0.852789	7.037059e-61	4.202316e-58
MsaG008356	MsaG039921	0.801704	1.331929e-48	1.871551e-46
MsaG008552	MsaG039921	0.845801	6.081752e-59	2.861497e-56
MsaG008890	MsaG039921	0.802020	1.147894e-48	1.624556e-46
MsaG009078	MsaG039921	0.802063	1.124643e-48	1.593259e-46
MsaG009409	MsaG039921	0.819897	1.597148e-52	3.503110e-50
MsaG009578	MsaG039921	0.806147	1.604896e-49	2.499237e-47
MsaG009655	MsaG039921	0.857545	2.957459e-62	2.096688e-59
MsaG009843	MsaG039921	0.867402	2.831113e-65	2.946880e-62
MsaG010066	MsaG039921	0.820361	1.252079e-52	2.780283e-50
MsaG010394	MsaG039921	0.824902	1.112977e-53	2.792233e-51
MsaG010416	MsaG039921	0.830087	6.431450e-55	1.865973e-52
MsaG010460	MsaG039921	0.805640	2.048872e-49	3.152815e-47
MsaG010508	MsaG039921	0.822570	3.890745e-53	9.162062e-51
MsaG010906	MsaG039921	0.830541	4.987314e-55	1.465784e-52
MsaG010899	MsaG039921	0.800834	2.002511e-48	2.758999e-46
MsaG011139	MsaG039921	0.818559	3.211572e-52	6.800587e-50
MsaG011237	MsaG039921	0.849294	6.735716e-60	3.563743e-57
MsaG011363	MsaG039921	0.805846	1.855491e-49	2.869044e-47
MsaG011603	MsaG039921	0.800456	2.389630e-48	3.264439e-46
MsaG011659	MsaG039921	0.839760	2.412852e-57	9.348129e-55
MsaG011666	MsaG039921	0.822960	3.159164e-53	7.518430e-51
MsaG011664	MsaG039921	0.863731	4.015673e-64	3.607168e-61
MsaG011668	MsaG039921	0.841060	1.106787e-57	4.467297e-55
MsaG011685	MsaG039921	0.840864	1.245636e-57	4.996345e-55
MsaG011774	MsaG039921	0.840689	1.383931e-57	5.520506e-55
MsaG012020	MsaG039921	0.823608	2.234303e-53	5.411544e-51
MsaG012263	MsaG039921	0.825414	8.433146e-54	2.145570e-51
MsaG012422	MsaG039921	0.837398	9.757551e-57	3.513420e-54
MsaG012591	MsaG039921	0.855244	1.389440e-61	9.055866e-59
MsaG013085	MsaG039921	0.818284	3.703285e-52	7.786302e-50
MsaG013657	MsaG039921	0.807854	7.012693e-50	1.137260e-47
MsaG013962	MsaG039921	0.807359	8.924673e-50	1.430206e-47
MsaG013993	MsaG039921	0.803215	6.523493e-49	9.489368e-47
MsaG014439	MsaG039921	0.800138	2.771440e-48	3.758834e-46
MsaG014727	MsaG039921	0.843495	2.524523e-58	1.101409e-55
MsaG014856	MsaG039921	0.852471	8.661710e-61	5.115201e-58
MsaG014953	MsaG039921	0.837197	1.098268e-56	3.930132e-54
MsaG015176	MsaG039921	0.828208	1.827348e-54	5.026369e-52
MsaG015705	MsaG039921	0.852055	1.135775e-60	6.610937e-58
MsaG016058	MsaG039921	0.814421	2.683999e-51	5.113395e-49
MsaG016149	MsaG039921	0.822413	4.229651e-53	9.918312e-51
MsaG017209	MsaG039921	0.810778	1.666717e-50	2.900779e-48
MsaG017505	MsaG039921	0.829725	7.873831e-55	2.260860e-52
MsaG017480	MsaG039921	0.806203	1.561693e-49	2.435330e-47
MsaG017501	MsaG039921	0.830070	6.491010e-55	1.882368e-52
MsaG017702	MsaG039921	0.851666	1.463206e-60	8.399966e-58
MsaG018040	MsaG039921	0.853762	3.712316e-61	2.294662e-58
MsaG018243	MsaG039921	0.806390	1.427190e-49	2.235416e-47
MsaG018380	MsaG039921	0.841564	8.171069e-58	3.351110e-55
MsaG018498	MsaG039921	0.848301	1.266042e-59	6.475959e-57
MsaG018581	MsaG039921	0.813368	4.568142e-51	8.475865e-49
MsaG018593	MsaG039921	0.826940	3.669086e-54	9.740036e-52
MsaG018636	MsaG039921	0.817124	6.745427e-52	1.376566e-49
MsaG018644	MsaG039921	0.860443	4.050105e-63	3.203248e-60
MsaG018712	MsaG039921	0.801993	1.162491e-48	1.644228e-46
MsaG018966	MsaG039921	0.805157	2.583499e-49	3.931109e-47
MsaG019138	MsaG039921	0.811698	1.055005e-50	1.877996e-48
MsaG019356	MsaG039921	0.855553	1.130513e-61	7.451660e-59
MsaG019442	MsaG039921	0.825584	7.688045e-54	1.965264e-51
MsaG019577	MsaG039921	0.837426	9.601377e-57	3.460136e-54
MsaG019727	MsaG039921	0.807335	9.028019e-50	1.445938e-47
MsaG019731	MsaG039921	0.801227	1.666386e-48	2.316269e-46
MsaG019911	MsaG039921	0.820699	1.048344e-52	2.348557e-50
MsaG020033	MsaG039921	0.857906	2.313307e-62	1.662356e-59
MsaG020020	MsaG039921	0.888754	9.747386e-73	2.692805e-69
MsaG020078	MsaG039921	0.836763	1.415538e-56	4.999310e-54
MsaG020182	MsaG039921	0.814662	2.375739e-51	4.553440e-49
MsaG020486	MsaG039921	0.828631	1.446289e-54	4.025687e-52
MsaG020531	MsaG039921	0.846192	4.767930e-59	2.272592e-56
MsaG020580	MsaG039921	0.815652	1.435642e-51	2.821439e-49
MsaG020810	MsaG039921	0.825087	1.006840e-53	2.538751e-51
MsaG020843	MsaG039921	0.805332	2.376101e-49	3.630136e-47
MsaG020874	MsaG039921	0.819477	1.990264e-52	4.317266e-50
MsaG020875	MsaG039921	0.852945	6.350436e-61	3.813597e-58
MsaG021448	MsaG039921	0.880221	1.386022e-69	2.527044e-66
MsaG022804	MsaG039921	0.803629	5.358407e-49	7.869457e-47
MsaG023135	MsaG039921	0.802405	9.573637e-49	1.366967e-46
MsaG023578	MsaG039921	0.806947	1.089850e-49	1.729545e-47
MsaG023719	MsaG039921	0.801330	1.587636e-48	2.212032e-46
MsaG023761	MsaG039921	0.839527	2.770985e-57	1.065759e-54
MsaG023762	MsaG039921	0.873461	2.974396e-67	3.997810e-64
MsaG023778	MsaG039921	0.800413	2.438776e-48	3.328276e-46
MsaG023924	MsaG039921	0.855068	1.562688e-61	1.012010e-58
MsaG024010	MsaG039921	0.819162	2.345903e-52	5.046947e-50
MsaG024228	MsaG039921	0.837142	1.134024e-56	4.051335e-54
MsaG025287	MsaG039921	0.802995	7.242104e-49	1.048131e-46
MsaG026830	MsaG039921	0.814140	3.095040e-51	5.854830e-49
MsaG026985	MsaG039921	0.832662	1.505412e-55	4.705315e-53
MsaG027364	MsaG039921	0.809092	3.828951e-50	6.397158e-48
MsaG027681	MsaG039921	0.846938	2.989345e-59	1.460775e-56
MsaG027776	MsaG039921	0.807559	8.098343e-50	1.303978e-47
MsaG027977	MsaG039921	0.833047	1.209561e-55	3.823436e-53
MsaG028026	MsaG039921	0.833007	1.237021e-55	3.905614e-53
MsaG028234	MsaG039921	0.866499	5.477109e-65	5.495281e-62
MsaG028334	MsaG039921	0.839425	2.945047e-57	1.129076e-54
MsaG028503	MsaG039921	0.829727	7.862774e-55	2.257831e-52
MsaG028735	MsaG039921	0.813202	4.966766e-51	9.177403e-49
MsaG028698	MsaG039921	0.819323	2.157319e-52	4.660863e-50
MsaG028843	MsaG039921	0.878214	7.053630e-69	1.172486e-65
MsaG029017	MsaG039921	0.801647	1.367865e-48	1.919601e-46
MsaG029461	MsaG039921	0.848478	1.131918e-59	5.824178e-57
MsaG029801	MsaG039921	0.859903	5.886465e-63	4.559416e-60
MsaG029951	MsaG039921	0.822724	3.584869e-53	8.477110e-51
MsaG029990	MsaG039921	0.802099	1.105612e-48	1.567570e-46
MsaG030045	MsaG039921	0.815088	1.913101e-51	3.706341e-49
MsaG030471	MsaG039921	0.816377	9.905044e-52	1.982827e-49
MsaG030501	MsaG039921	0.819460	2.007729e-52	4.353264e-50
MsaG030546	MsaG039921	0.831252	3.344525e-55	1.003264e-52
MsaG031043	MsaG039921	0.843279	2.880950e-58	1.248161e-55
MsaG032046	MsaG039921	0.822049	5.133053e-53	1.191956e-50
MsaG032062	MsaG039921	0.813726	3.814594e-51	7.141582e-49
MsaG032148	MsaG039921	0.822642	3.743719e-53	8.833224e-51
MsaG032741	MsaG039921	0.838050	6.649444e-57	2.442502e-54
MsaG032928	MsaG039921	0.858082	2.052141e-62	1.484300e-59
MsaG032947	MsaG039921	0.807211	9.591433e-50	1.531603e-47
MsaG033022	MsaG039921	0.811809	9.981540e-51	1.781677e-48
MsaG033692	MsaG039921	0.821198	8.055409e-53	1.828767e-50
MsaG034147	MsaG039921	0.832109	2.061247e-55	6.340479e-53
MsaG034337	MsaG039921	0.825327	8.839966e-54	2.243789e-51
MsaG034741	MsaG039921	0.804742	3.151573e-49	4.749508e-47
MsaG034842	MsaG039921	0.817691	5.036140e-52	1.042775e-49
MsaG035015	MsaG039921	0.804434	3.652618e-49	5.465297e-47
MsaG035057	MsaG039921	0.832066	2.111501e-55	6.487032e-53
MsaG035463	MsaG039921	0.820188	1.371254e-52	3.031110e-50
MsaG035532	MsaG039921	0.865143	1.461319e-64	1.388579e-61
MsaG035533	MsaG039921	0.860530	3.811491e-63	3.024206e-60
MsaG035552	MsaG039921	0.866025	7.729302e-65	7.607823e-62
MsaG035682	MsaG039921	0.806404	1.417261e-49	2.220629e-47
MsaG036109	MsaG039921	0.804115	4.253087e-49	6.317070e-47
MsaG036241	MsaG039921	0.825415	8.426747e-54	2.144042e-51
MsaG036288	MsaG039921	0.817398	5.856789e-52	1.203664e-49
MsaG038016	MsaG039921	0.813330	4.656667e-51	8.631846e-49
MsaG038263	MsaG039921	0.829425	9.302083e-55	2.648152e-52
MsaG038421	MsaG039921	0.809294	3.467766e-50	5.821500e-48
MsaG039467	MsaG039921	0.800927	1.917891e-48	2.647866e-46
MsaG039487	MsaG039921	0.827069	3.420141e-54	9.111388e-52
MsaG039489	MsaG039921	0.804948	2.856437e-49	4.325247e-47
MsaG039599	MsaG039921	0.914014	7.781371e-84	9.607631e-80
MsaG039921	MsaG039833	0.815510	1.543498e-51	3.022353e-49
MsaG039921	MsaG040587	0.831971	2.228144e-55	6.826214e-53
MsaG039921	MsaG040649	0.810260	2.153430e-50	3.700853e-48
MsaG039921	MsaG040670	0.803479	5.756572e-49	8.424872e-47
MsaG039921	MsaG040704	0.836408	1.742133e-56	6.087557e-54
MsaG039921	MsaG040853	0.834840	4.324237e-56	1.441558e-53
MsaG039921	MsaG041116	0.826271	5.290275e-54	1.378411e-51
MsaG039921	MsaG041256	0.808043	6.396241e-50	1.041998e-47
MsaG039921	MsaG041271	0.829968	6.872986e-55	1.987315e-52
MsaG039921	MsaG041905	0.810758	1.683582e-50	2.928670e-48
MsaG039921	MsaG041949	0.808958	4.089506e-50	6.810353e-48
MsaG039921	MsaG041966	0.800103	2.817911e-48	3.818808e-46
MsaG039921	MsaG042408	0.803166	6.677648e-49	9.702703e-47
MsaG039921	MsaG042632	0.809415	3.266539e-50	5.500153e-48
MsaG039921	MsaG043000	0.814930	2.073585e-51	4.001284e-49
MsaG039921	MsaG043659	0.871274	1.581775e-66	1.934680e-63
MsaG039921	MsaG043663	0.801922	1.202207e-48	1.697686e-46
MsaG039921	MsaG043668	0.846484	3.971653e-59	1.911484e-56
MsaG039921	MsaG043772	0.815473	1.572813e-51	3.076909e-49
MsaG039921	MsaG043924	0.820760	1.014846e-52	2.277301e-50
MsaG039921	MsaG043926	0.825622	7.531773e-54	1.927317e-51
MsaG039921	MsaG044336	0.813421	4.448123e-51	8.264431e-49
MsaG039921	MsaG044471	0.844647	1.243640e-58	5.633014e-56
MsaG039921	MsaG044472	0.820859	9.636009e-53	2.167935e-50
MsaG039921	MsaG044663	0.809064	3.882215e-50	6.481687e-48
MsaG039921	MsaG044664	0.829546	8.695381e-55	2.484038e-52
MsaG039921	MsaG044888	0.901817	4.235235e-78	2.410392e-74
MsaG039921	MsaG044889	0.855903	8.945261e-62	5.970759e-59
MsaG039921	MsaG044919	0.807367	8.891356e-50	1.425108e-47
MsaG039921	MsaG045016	0.836357	1.794569e-56	6.261079e-54
MsaG039921	MsaG045067	0.827107	3.349418e-54	8.932869e-52
MsaG039921	MsaG045109	0.819361	2.114154e-52	4.572231e-50
MsaG039921	MsaG045729	0.809406	3.281938e-50	5.524719e-48
MsaG039921	MsaG045743	0.823436	2.449019e-53	5.903756e-51
MsaG039921	MsaG045824	0.801213	1.677108e-48	2.330435e-46
MsaG039921	MsaG046029	0.816574	8.953182e-52	1.801333e-49
MsaG039921	MsaG046040	0.823570	2.280043e-53	5.516452e-51
MsaG039921	MsaG046053	0.807782	7.262975e-50	1.175803e-47
MsaG039921	MsaG046488	0.805947	1.767547e-49	2.739532e-47
MsaG039921	MsaG046588	0.841795	7.104054e-58	2.934939e-55
MsaG039921	MsaG046657	0.813949	3.407795e-51	6.416015e-49
MsaG039921	MsaG046703	0.861494	1.946614e-63	1.602097e-60
MsaG039921	MsaG046816	0.817537	5.452337e-52	1.124519e-49
MsaG039921	MsaG047092	0.826729	4.119174e-54	1.087077e-51
MsaG039921	MsaG047133	0.807678	7.643473e-50	1.234252e-47
MsaG039921	MsaG002316	0.815713	1.391389e-51	2.738660e-49
MsaG039921	MsaG003734	0.814249	2.928968e-51	5.555928e-49
MsaG039921	MsaG001808	0.824058	1.754297e-53	4.301049e-51
MsaG039921	MsaG002984	0.831928	2.283597e-55	6.987477e-53
MsaG039921	MsaG001694	0.805420	2.276913e-49	3.485727e-47
MsaG039921	MsaG002251	0.827590	2.568002e-54	6.942412e-52
MsaG039921	MsaG007590	0.847985	1.546473e-59	7.827969e-57
MsaG039921	MsaG011672	0.833064	1.197600e-55	3.787627e-53
MsaG039921	MsaG013967	0.883659	7.968946e-71	1.710666e-67
MsaG039921	MsaG014180	0.826534	4.582297e-54	1.202721e-51
MsaG039921	MsaG014275	0.808328	5.566434e-50	9.130111e-48
MsaG039921	MsaG012091	0.808359	5.482649e-50	8.999443e-48
MsaG039921	MsaG014819	0.817970	4.358743e-52	9.090712e-50
MsaG039921	MsaG012695	0.803204	6.558561e-49	9.537940e-47
MsaG039921	MsaG019516	0.803906	4.697414e-49	6.943059e-47
MsaG039921	MsaG019914	0.806688	1.235326e-49	1.948591e-47
MsaG039921	MsaG018864	0.810011	2.435148e-50	4.159689e-48
MsaG039921	MsaG017934	0.801108	1.761423e-48	2.441838e-46
MsaG039921	MsaG018678	0.822499	4.039670e-53	9.494761e-51
MsaG039921	MsaG020038	0.826037	6.009228e-54	1.555692e-51
MsaG039921	MsaG024084	0.847012	2.853836e-59	1.398041e-56
MsaG039921	MsaG019165	0.804703	3.211941e-49	4.835929e-47
MsaG039921	MsaG029782	0.848739	9.587544e-60	4.977479e-57
MsaG039921	MsaG028289	0.824568	1.332761e-53	3.313243e-51
MsaG039921	MsaG028139	0.811534	1.144556e-50	2.029231e-48
MsaG039921	MsaG028903	0.864031	3.243649e-64	2.948308e-61
MsaG039921	MsaG032663	0.842214	5.512119e-58	2.307741e-55
MsaG039921	MsaG034613	0.815899	1.265200e-51	2.502061e-49
MsaG039921	MsaG032261	0.839960	2.140373e-57	8.345106e-55
MsaG039921	MsaG032935	0.803697	5.189223e-49	7.633060e-47
MsaG039921	MsaG032591	0.887338	3.386100e-72	8.710712e-69
MsaG039921	MsaG030863	0.814661	2.376250e-51	4.554346e-49
MsaG039921	MsaG032931	0.823623	2.215315e-53	5.367892e-51
MsaG039921	MsaG032384	0.807003	1.060715e-49	1.685538e-47
MsaG039921	MsaG032980	0.800608	2.225739e-48	3.051053e-46
MsaG039921	MsaG029957	0.811274	1.303037e-50	2.295508e-48
MsaG039921	MsaG034730	0.852836	6.822619e-61	4.081038e-58
MsaG039921	MsaG031188	0.800049	2.889152e-48	3.910683e-46
MsaG039921	MsaG031025	0.851680	1.450215e-60	8.329407e-58
MsaG039921	MsaG030874	0.803866	4.788811e-49	7.071627e-47
MsaG039921	MsaG032473	0.817012	7.147436e-52	1.454377e-49
MsaG039921	MsaG033504	0.835045	3.842343e-56	1.288766e-53
MsaG039921	MsaG037384	0.807144	9.908418e-50	1.579741e-47
MsaG039921	MsaG035090	0.801289	1.618527e-48	2.252936e-46
MsaG039921	MsaG036651	0.806995	1.064664e-49	1.691496e-47
MsaG039921	MsaG035294	0.803530	5.618853e-49	8.233059e-47
MsaG039921	MsaG036073	0.843370	2.725523e-58	1.184326e-55
MsaG039921	MsaG035272	0.838645	4.678910e-57	1.750790e-54
MsaG039921	MsaG043457	0.802274	1.018343e-48	1.449638e-46
MsaG039921	MsaG041378	0.841948	6.475589e-58	2.688543e-55
MsaG039921	MsaG042585	0.878040	8.110794e-69	1.337346e-65
MsaG039921	MsaG043047	0.826699	4.187522e-54	1.104190e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039921	MtrunA17_Chr7g0263871	100.000	73	0	0	1	73	1	73	7.53e-47	143
MsaG039921	MtrunA17_Chr7g0263831	85.897	78	6	1	1	73	7	84	2.20e-18	71.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG039921	AT2G37120.1	76.190	63	15	0	11	73	14	76	5.53e-15	63.2
MsaG039921	AT3G53370.1	80.000	60	12	0	14	73	17	76	1.77e-12	57.0

Find 16 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGATTGTTCTCCTGGTTAT+TGG	0.231388	7:-94469398	MsaT039921.1:CDS
CCCAGGCTTGATTGTTCTCC+TGG	0.358351	7:-94469405	MsaT039921.1:CDS
TGGGGAAATGTTTAGAATGC+TGG	0.422488	7:-94469443	MsaT039921.1:intron
GTTTAGAATGCTGGATCTCA+AGG	0.468079	7:-94469434	MsaT039921.1:intron
ACCAGGAGAACAATCAAGCC+TGG	0.470447	7:+94469404	None:intergenic
ATTGTTCTCCTGGTTATTGG+TGG	0.489076	7:-94469395	MsaT039921.1:CDS
TTGCTGTTGACATTTCTCAT+TGG	0.497549	7:-94469371	MsaT039921.1:CDS
AAGCAAGGAGTCTCTGCACC+TGG	0.518649	7:-94469257	MsaT039921.1:CDS
ATACAGTGCCTCTACTCTCC+AGG	0.531169	7:+94469239	None:intergenic
TTGTTCTCCTGGTTATTGGT+GGG	0.546594	7:-94469394	MsaT039921.1:CDS
GCTCTACGTTTATGCACAGA+AGG	0.594297	7:-94469339	MsaT039921.1:CDS
ACAGCAACCCACCAATAACC+AGG	0.598951	7:+94469387	None:intergenic
CCAGGAGAACAATCAAGCCT+GGG	0.608678	7:+94469405	None:intergenic
GGATCTCAAGGGTTCAACCC+AGG	0.613072	7:-94469422	MsaT039921.1:CDS
TTTAGAATGCTGGATCTCAA+GGG	0.619147	7:-94469433	MsaT039921.1:intron
TCTCTGCACCTGGAGAGTAG+AGG	0.653251	7:-94469247	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	94469250	94470578	94469250	ID=MsaG039921
Chr7	mRNA	94469250	94470578	94469250	ID=MsaT039921.1;Parent=MsaG039921
Chr7	exon	94469250	94469450	94469250	ID=MsaT039921.1.exon2;Parent=MsaT039921.1
Chr7	CDS	94469250	94469450	94469250	ID=cds.MsaT039921.1;Parent=MsaT039921.1
Chr7	exon	94470558	94470578	94470558	ID=MsaT039921.1.exon1;Parent=MsaT039921.1
Chr7	CDS	94470558	94470578	94470558	ID=cds.MsaT039921.1;Parent=MsaT039921.1

Gene Sequence	>MsaT039921.1 ATGGCCGATAAAGTCCCCCCGAATGCTGGATCTCAAGGGTTCAACCCAGGCTTGATTGTTCTCCTGGTTATTGGTGGGTTGCTGTTGACATTTCTCATTGGAAATTATGCGCTCTACGTTTATGCACAGAAGGCCCTCCCTCCTAGAAAAAAGAAGCCAGTCTCAAAAAAGAAGATGAAAAAGGAGAGGCTGAAGCAAGGAGTCTCTGCACCTGGAGAGTAG
Protein sequence	>MsaT039921.1 MADKVPPNAGSQGFNPGLIVLLVIGGLLLTFLIGNYALYVYAQKALPPRKKKPVSKKKMKKERLKQGVSAPGE*