AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG040104

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040104 MtrunA17_Chr7g0266031 97.146 876 25 0 1 876 1 876 0.0 1750
MsaG040104 MtrunA17_Chr1g0179101 71.348 883 222 13 1 876 1 859 0.0 1164
MsaG040104 MtrunA17_Chr3g0080101 51.361 882 343 19 1 876 1 802 0.0 739
MsaG040104 MtrunA17_Chr2g0290691 63.252 449 158 6 407 848 118 566 0.0 581
MsaG040104 MtrunA17_Chr7g0250631 58.798 466 177 8 383 843 259 714 0.0 558
MsaG040104 MtrunA17_Chr8g0335351 58.836 464 179 7 383 842 265 720 0.0 555
MsaG040104 MtrunA17_Chr7g0227331 68.668 383 114 3 467 843 207 589 0.0 554
MsaG040104 MtrunA17_Chr6g0449401 55.622 498 171 7 388 843 161 650 0.0 543
MsaG040104 MtrunA17_Chr2g0309421 58.654 416 164 6 437 848 120 531 5.23e-165 492
MsaG040104 MtrunA17_Chr8g0356291 51.072 513 207 13 347 848 4 483 8.18e-158 472
MsaG040104 MtrunA17_Chr4g0063311 54.177 395 162 7 466 843 65 457 1.27e-139 424
MsaG040104 MtrunA17_Chr2g0321101 53.543 381 150 6 471 836 66 434 6.27e-126 387
MsaG040104 MtrunA17_Chr8g0381091 49.250 400 166 10 460 843 45 423 6.74e-121 374
MsaG040104 MtrunA17_Chr2g0285711 49.231 390 164 9 467 843 57 425 2.27e-120 372
MsaG040104 MtrunA17_Chr2g0312641 46.366 399 177 9 451 842 51 419 3.81e-106 336
MsaG040104 MtrunA17_Chr4g0030361 46.011 376 155 4 467 842 282 609 1.51e-105 340
MsaG040104 MtrunA17_Chr8g0369091 44.415 376 164 3 467 842 572 902 3.16e-104 344
MsaG040104 MtrunA17_Chr2g0327561 45.646 379 163 3 467 842 601 939 3.05e-100 334
MsaG040104 MtrunA17_Chr4g0032761 39.572 374 201 7 489 847 10 373 2.67e-76 254
MsaG040104 MtrunA17_Chr8g0338741 37.280 397 207 10 489 869 15 385 3.48e-72 244
MsaG040104 MtrunA17_Chr2g0329011 38.133 375 191 8 489 859 12 349 1.87e-71 240
MsaG040104 MtrunA17_Chr7g0234641 37.534 373 201 8 484 844 1 353 4.39e-68 233
MsaG040104 MtrunA17_Chr5g0428981 37.427 342 168 8 491 831 760 1056 1.68e-57 214
MsaG040104 MtrunA17_Chr4g0018201 37.135 342 169 8 491 831 756 1052 4.80e-57 213
MsaG040104 MtrunA17_Chr6g0478601 38.053 339 165 8 494 831 111 405 7.00e-57 204
MsaG040104 MtrunA17_Chr3g0135951 30.238 420 249 12 418 831 25 406 1.66e-48 180
MsaG040104 MtrunA17_Chr1g0187581 31.620 389 216 12 481 856 104 455 3.67e-47 177
MsaG040104 MtrunA17_Chr1g0153321 30.458 371 214 9 470 834 84 416 9.65e-47 175
MsaG040104 MtrunA17_Chr7g0261491 31.217 378 211 12 481 847 107 446 4.45e-44 168
MsaG040104 MtrunA17_Chr1g0167351 31.266 387 205 12 489 856 105 449 5.56e-44 167
MsaG040104 MtrunA17_Chr2g0299781 29.670 364 223 10 472 831 91 425 2.09e-42 162
MsaG040104 MtrunA17_Chr1g0167311 30.220 364 211 9 489 847 110 435 9.04e-42 160
MsaG040104 MtrunA17_Chr1g0197721 30.423 355 176 10 491 842 48 334 7.51e-38 148
MsaG040104 MtrunA17_Chr7g0245031 39.216 153 91 1 489 641 143 293 2.03e-26 114
MsaG040104 MtrunA17_Chr7g0245031 45.946 111 57 2 722 831 301 409 1.21e-22 102
MsaG040104 MtrunA17_Chr4g0059751 36.527 167 92 4 484 641 80 241 5.12e-25 108
MsaG040104 MtrunA17_Chr4g0059751 41.071 112 63 2 722 832 249 358 1.86e-23 104
MsaG040104 MtrunA17_Chr1g0183651 33.750 160 104 1 481 640 107 264 1.08e-23 106
MsaG040104 MtrunA17_Chr1g0183651 41.406 128 68 4 725 847 317 442 2.74e-19 92.8
MsaG040104 MtrunA17_Chr3g0125381 41.964 112 61 1 716 827 100 207 1.27e-23 100
MsaG040104 MtrunA17_Chr3g0125381 36.634 101 60 2 544 643 2 99 2.77e-11 64.3
MsaG040104 MtrunA17_Chr8g0351491 41.509 106 58 1 722 827 167 268 2.97e-19 89.0
MsaG040104 MtrunA17_Chr8g0351491 34.437 151 95 2 494 643 16 163 6.55e-16 79.0
MsaG040104 MtrunA17_Chr3g0132671 26.702 382 164 14 491 840 16 313 1.61e-18 90.1
MsaG040104 MtrunA17_Chr3g0140631 36.364 154 92 2 491 642 34 183 2.32e-18 86.7
MsaG040104 MtrunA17_Chr3g0140631 38.318 107 62 1 719 825 185 287 2.51e-16 80.9
MsaG040104 MtrunA17_Chr8g0353621 40.385 104 58 1 722 825 161 260 2.40e-17 83.2
MsaG040104 MtrunA17_Chr8g0353621 34.211 152 94 2 494 643 10 157 6.38e-16 79.0
MsaG040104 MtrunA17_Chr4g0013131 33.548 155 100 2 487 641 5 156 3.37e-17 85.5
MsaG040104 MtrunA17_Chr3g0114511 34.839 155 96 1 487 641 25 174 3.71e-17 85.1
MsaG040104 MtrunA17_Chr6g0486661 37.209 129 73 4 719 842 909 1034 4.86e-17 86.3
MsaG040104 MtrunA17_Chr8g0379091 25.066 379 202 11 489 866 21 318 6.88e-17 84.7
MsaG040104 MtrunA17_Chr2g0284031 36.601 153 94 2 489 641 26 175 9.08e-17 84.3
MsaG040104 MtrunA17_Chr4g0008561 27.246 334 158 14 498 826 23 276 1.37e-16 84.7
MsaG040104 MtrunA17_Chr7g0244521 31.613 155 103 2 487 641 5 156 5.56e-16 81.6
MsaG040104 MtrunA17_Chr3g0107011 31.250 160 106 3 482 641 3 158 1.64e-15 80.1
MsaG040104 MtrunA17_Chr1g0205421 33.121 157 100 2 485 640 3 155 2.37e-15 79.7
MsaG040104 MtrunA17_Chr7g0272841 32.886 149 89 3 500 641 74 218 7.92e-15 79.0
MsaG040104 MtrunA17_Chr1g0188031 33.333 153 98 4 491 641 17 167 9.63e-15 77.8
MsaG040104 MtrunA17_Chr5g0432471 29.139 151 104 2 491 641 9 156 1.22e-14 77.4
MsaG040104 MtrunA17_Chr2g0304111 31.333 150 97 2 494 641 23 168 1.93e-14 77.0
MsaG040104 MtrunA17_Chr3g0107051 33.108 148 96 2 494 641 21 165 2.06e-14 76.6
MsaG040104 MtrunA17_Chr2g0286501 35.897 156 86 5 491 643 46 190 3.47e-14 77.4
MsaG040104 MtrunA17_Chr4g0000431 30.519 154 103 3 489 641 19 169 4.10e-14 76.6
MsaG040104 MtrunA17_Chr8g0346071 28.571 161 113 1 494 654 17 175 5.37e-14 75.1
MsaG040104 MtrunA17_Chr4g0074111 31.847 157 101 3 494 650 18 168 5.77e-14 74.7
MsaG040104 MtrunA17_Chr3g0091311 31.613 155 103 1 487 641 5 156 9.40e-14 72.4
MsaG040104 MtrunA17_Chr2g0284011 30.128 156 104 2 487 641 5 156 9.83e-14 74.7
MsaG040104 MtrunA17_Chr2g0302431 30.818 159 108 2 483 641 9 165 1.88e-13 73.9
MsaG040104 MtrunA17_Chr1g0150321 33.333 156 99 2 486 641 7 157 3.02e-13 72.8
MsaG040104 MtrunA17_Chr8g0346081 28.571 161 113 2 494 654 17 175 3.05e-13 72.8
MsaG040104 MtrunA17_Chr6g0450571 31.169 154 102 3 489 641 11 161 3.10e-13 73.6
MsaG040104 MtrunA17_Chr4g0001331 31.081 148 99 1 494 641 20 164 3.28e-13 72.8
MsaG040104 MtrunA17_Chr2g0317001 30.405 148 99 2 494 641 15 158 3.44e-13 73.6
MsaG040104 MtrunA17_Chr1g0202831 33.333 147 92 4 498 641 415 558 3.46e-13 73.9
MsaG040104 MtrunA17_Chr5g0419441 32.432 148 97 2 494 641 239 383 3.56e-13 73.6
MsaG040104 MtrunA17_Chr1g0176751 34.746 118 64 4 724 839 283 389 3.61e-13 73.2
MsaG040104 MtrunA17_Chr2g0330211 30.872 149 100 2 494 641 18 164 6.49e-13 72.4
MsaG040104 MtrunA17_Chr6g0453681 31.373 153 99 2 491 641 16 164 8.15e-13 72.0
MsaG040104 MtrunA17_Chr8g0386981 34.247 146 88 3 500 641 414 555 1.01e-12 72.4
MsaG040104 MtrunA17_Chr6g0468751 31.373 153 99 2 491 641 16 164 1.23e-12 71.2
MsaG040104 MtrunA17_Chr5g0428031 28.000 150 102 2 494 641 9 154 1.61e-12 70.9
MsaG040104 MtrunA17_Chr1g0190831 28.571 154 104 3 491 641 1 151 1.62e-12 71.2
MsaG040104 MtrunA17_Chr2g0321841 29.221 154 103 3 491 641 1 151 2.00e-12 71.2
MsaG040104 MtrunA17_Chr4g0025671 29.221 154 103 3 491 641 5 155 2.01e-12 71.2
MsaG040104 MtrunA17_Chr1g0170551 33.962 106 64 2 725 830 162 261 2.21e-12 71.2
MsaG040104 MtrunA17_Chr4g0061141 31.844 179 97 6 476 641 85 251 2.58e-12 70.9
MsaG040104 MtrunA17_Chr5g0441011 28.667 150 101 2 494 641 13 158 3.19e-12 69.7
MsaG040104 MtrunA17_Chr7g0267751 35.185 108 63 3 722 827 292 394 4.10e-12 70.1
MsaG040104 MtrunA17_Chr1g0166101 30.263 152 103 2 491 641 21 170 4.87e-12 68.9
MsaG040104 MtrunA17_Chr5g0432491 32.432 148 98 2 494 641 23 168 9.52e-12 68.2
MsaG040104 MtrunA17_Chr1g0188991 29.054 148 103 1 494 641 15 160 9.88e-12 68.9
MsaG040104 MtrunA17_Chr7g0257751 37.963 108 58 5 722 826 215 316 1.28e-11 68.2
MsaG040104 MtrunA17_Chr1g0203881 33.553 152 95 4 494 641 41 190 1.46e-11 67.8
MsaG040104 MtrunA17_Chr1g0200601 35.065 154 94 4 493 642 29 180 1.61e-11 67.8
MsaG040104 MtrunA17_Chr3g0130151 31.410 156 103 2 498 651 248 401 2.19e-11 67.8
MsaG040104 MtrunA17_Chr1g0205931 34.000 150 86 5 500 641 61 205 2.40e-11 67.4
MsaG040104 MtrunA17_Chr6g0453711 28.649 185 107 6 476 648 90 261 2.44e-11 67.4
MsaG040104 MtrunA17_Chr2g0276831 33.533 167 96 6 498 657 14 172 2.55e-11 66.6
MsaG040104 MtrunA17_Chr1g0190131 34.653 101 60 2 727 825 167 263 4.38e-11 64.7
MsaG040104 MtrunA17_Chr2g0333821 33.108 148 96 2 494 641 14 158 4.76e-11 66.2
MsaG040104 MtrunA17_Chr3g0133541 30.464 151 102 2 493 641 306 455 5.99e-11 66.2
MsaG040104 MtrunA17_Chr3g0132591 35.374 147 81 4 500 643 118 253 6.57e-11 65.9
MsaG040104 MtrunA17_Chr3g0091281 31.210 157 101 4 487 641 5 156 7.09e-11 63.5
MsaG040104 MtrunA17_Chr4g0063881 28.667 150 101 2 494 641 11 156 7.62e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040104 AT3G52890.2 51.767 962 350 29 1 876 1 934 0.0 838
MsaG040104 AT3G52890.4 51.767 962 350 29 1 876 1 934 0.0 838
MsaG040104 AT3G52890.1 51.767 962 350 29 1 876 1 934 0.0 838
MsaG040104 AT3G52890.3 51.767 962 350 29 1 876 1 934 0.0 838
MsaG040104 AT5G03640.2 47.363 967 377 26 1 876 1 926 0.0 739
MsaG040104 AT5G03640.1 47.363 967 377 26 1 876 1 926 0.0 739
MsaG040104 AT5G47750.1 59.381 485 181 7 407 876 103 586 0.0 582
MsaG040104 AT4G26610.1 55.577 511 206 5 371 876 12 506 0.0 560
MsaG040104 AT5G55910.2 59.307 462 169 9 427 876 44 498 0.0 538
MsaG040104 AT5G55910.1 59.307 462 169 9 427 876 44 498 0.0 538
MsaG040104 AT2G44830.2 54.600 500 188 11 407 876 275 765 1.22e-178 535
MsaG040104 AT2G44830.3 54.600 500 188 11 407 876 275 765 1.22e-178 535
MsaG040104 AT2G44830.1 54.600 500 188 11 407 876 275 765 1.22e-178 535
MsaG040104 AT5G40030.1 58.636 440 152 7 454 876 73 499 4.80e-176 518
MsaG040104 AT3G27580.2 64.450 391 117 7 467 844 153 534 6.39e-170 505
MsaG040104 AT3G27580.1 64.450 391 117 7 467 844 153 534 6.39e-170 505
MsaG040104 AT1G79250.1 61.519 395 142 3 460 848 112 502 1.50e-165 493
MsaG040104 AT1G79250.3 61.519 395 142 3 460 848 112 502 1.50e-165 493
MsaG040104 AT1G79250.2 61.519 395 142 3 460 848 112 502 1.50e-165 493
MsaG040104 AT1G79250.4 61.519 395 142 3 460 848 112 502 1.50e-165 493
MsaG040104 AT3G12690.1 61.692 402 144 5 458 858 148 540 1.15e-164 492
MsaG040104 AT3G12690.3 61.692 402 144 5 458 858 148 540 1.15e-164 492
MsaG040104 AT3G12690.2 61.692 402 144 5 458 858 148 540 1.15e-164 492
MsaG040104 AT1G16440.1 59.635 384 142 3 467 848 86 458 2.11e-155 465
MsaG040104 AT3G44610.1 55.000 360 130 7 499 836 74 423 1.02e-126 389
MsaG040104 AT2G26700.1 46.018 452 187 8 447 844 35 483 3.34e-126 390
MsaG040104 AT2G34650.1 52.713 387 148 8 467 843 50 411 4.22e-126 387
MsaG040104 AT5G58140.6 46.277 376 155 4 468 842 551 880 1.62e-106 350
MsaG040104 AT5G58140.7 46.277 376 155 4 468 842 551 880 1.62e-106 350
MsaG040104 AT5G58140.5 46.277 376 155 4 468 842 551 880 1.62e-106 350
MsaG040104 AT5G58140.2 46.277 376 155 4 468 842 551 880 1.62e-106 350
MsaG040104 AT5G58140.1 46.277 376 155 4 468 842 551 880 1.62e-106 350
MsaG040104 AT5G58140.3 46.341 369 151 4 468 835 551 873 2.65e-105 347
MsaG040104 AT3G14370.1 45.358 377 176 5 469 841 61 411 5.95e-104 331
MsaG040104 AT3G45780.2 43.351 376 170 3 467 842 636 968 2.02e-95 322
MsaG040104 AT3G45780.1 43.351 376 170 3 467 842 636 968 2.02e-95 322
MsaG040104 AT1G53700.1 44.855 379 176 6 469 842 66 416 7.36e-95 306
MsaG040104 AT1G51170.1 39.402 368 184 9 489 843 17 358 1.45e-71 242
MsaG040104 AT3G20830.1 39.946 368 186 10 488 843 15 359 3.48e-71 241
MsaG040104 AT4G13000.1 36.813 364 183 9 489 843 15 340 1.53e-63 219
MsaG040104 AT3G25250.1 36.412 379 198 8 483 849 6 353 2.28e-63 220
MsaG040104 AT5G62310.1 37.026 343 169 10 491 831 751 1048 7.89e-56 210
MsaG040104 AT1G48490.4 37.681 345 162 10 489 831 824 1117 1.76e-55 209
MsaG040104 AT1G48490.3 37.681 345 162 10 489 831 823 1116 1.80e-55 209
MsaG040104 AT1G48490.2 37.681 345 162 10 489 831 823 1116 1.80e-55 209
MsaG040104 AT1G48490.1 37.681 345 162 10 489 831 823 1116 1.80e-55 209
MsaG040104 AT3G17850.1 37.901 343 160 10 494 831 882 1176 1.03e-54 206
MsaG040104 AT1G45160.2 36.667 360 175 10 489 844 665 975 1.17e-51 197
MsaG040104 AT1G45160.1 37.396 361 171 12 489 844 665 975 2.39e-51 196
MsaG040104 AT1G30640.2 30.633 395 235 8 456 844 80 441 9.87e-50 185
MsaG040104 AT1G30640.1 30.633 395 235 8 456 844 80 441 9.87e-50 185
MsaG040104 AT1G30640.3 31.622 370 216 7 479 844 12 348 2.03e-49 182
MsaG040104 AT2G20470.3 30.914 372 212 8 481 847 111 442 4.90e-46 174
MsaG040104 AT2G20470.2 30.914 372 212 8 481 847 111 442 8.74e-46 174
MsaG040104 AT2G20470.1 30.914 372 212 8 481 847 111 442 8.74e-46 174
MsaG040104 AT4G14350.2 29.596 446 256 12 413 847 44 442 9.16e-46 173
MsaG040104 AT4G14350.1 29.596 446 256 12 413 847 44 442 9.16e-46 173
MsaG040104 AT4G14350.4 29.596 446 256 12 413 847 44 442 9.16e-46 173
MsaG040104 AT4G14350.3 29.596 446 256 12 413 847 44 442 1.13e-45 173
MsaG040104 AT3G23310.1 30.052 386 228 10 469 847 95 445 2.50e-45 172
MsaG040104 AT4G33080.2 29.219 397 242 11 460 847 60 426 3.67e-45 171
MsaG040104 AT5G09890.2 31.268 355 206 7 481 831 89 409 3.84e-45 171
MsaG040104 AT4G33080.1 29.219 397 242 11 460 847 60 426 3.93e-45 171
MsaG040104 AT5G09890.1 31.268 355 206 7 481 831 89 409 4.64e-45 171
MsaG040104 AT1G03920.1 30.352 369 219 8 481 847 124 456 2.12e-44 170
MsaG040104 AT1G03920.3 30.352 369 219 8 481 847 124 456 2.12e-44 170
MsaG040104 AT1G03920.2 30.352 369 219 8 481 847 11 343 5.70e-44 166
MsaG040104 AT5G04510.2 30.114 352 175 10 494 842 44 327 5.55e-41 156
MsaG040104 AT5G04510.1 30.114 352 175 10 494 842 44 327 5.76e-41 158
MsaG040104 AT2G19400.1 29.700 367 225 10 470 831 81 419 7.29e-39 152
MsaG040104 AT5G58140.4 44.275 131 73 0 468 598 551 681 2.77e-30 128
MsaG040104 AT2G36350.1 44.330 194 87 7 1 178 1 189 4.64e-29 125
MsaG040104 AT3G08720.1 40.000 155 91 1 487 641 133 285 3.00e-28 119
MsaG040104 AT3G08720.1 48.673 113 54 3 720 831 291 400 8.69e-26 112
MsaG040104 AT3G08720.3 40.000 155 91 1 487 641 133 285 3.00e-28 119
MsaG040104 AT3G08720.3 48.673 113 54 3 720 831 291 400 8.69e-26 112
MsaG040104 AT3G08720.4 40.000 155 91 1 487 641 133 285 3.00e-28 119
MsaG040104 AT3G08720.4 48.673 113 54 3 720 831 291 400 8.69e-26 112
MsaG040104 AT3G08720.2 40.000 155 91 1 487 641 133 285 3.00e-28 119
MsaG040104 AT3G08720.2 48.673 113 54 3 720 831 291 400 8.69e-26 112
MsaG040104 AT3G08730.1 39.355 155 92 1 487 641 127 279 1.40e-27 117
MsaG040104 AT3G08730.1 46.875 128 62 4 720 844 285 409 8.88e-27 115
MsaG040104 AT3G08730.2 39.355 155 92 1 487 641 127 279 1.40e-27 117
MsaG040104 AT3G08730.2 46.875 128 62 4 720 844 285 409 8.88e-27 115
MsaG040104 AT5G04510.3 38.776 147 84 2 494 638 44 186 8.40e-26 109
MsaG040104 AT3G10540.1 38.095 147 85 2 494 638 45 187 1.54e-24 108
MsaG040104 AT3G10540.1 34.058 138 85 3 706 842 196 328 7.22e-18 88.2
MsaG040104 AT2G25090.1 27.463 335 170 11 494 826 15 278 3.55e-22 101
MsaG040104 AT2G20050.2 43.966 116 59 3 722 834 931 1043 3.86e-20 97.1
MsaG040104 AT2G20050.1 43.966 116 59 3 722 834 934 1046 3.90e-20 97.1
MsaG040104 AT2G45490.1 42.308 104 56 1 722 825 173 272 2.88e-19 89.7
MsaG040104 AT2G45490.1 33.766 154 98 2 491 643 19 169 2.93e-16 80.9
MsaG040104 AT5G45820.1 33.758 157 101 2 485 641 3 156 5.51e-18 88.2
MsaG040104 AT2G34180.1 25.568 352 182 9 477 827 40 312 1.12e-17 87.8
MsaG040104 AT2G25880.2 40.187 107 60 1 719 825 141 243 1.50e-17 84.0
MsaG040104 AT5G18700.1 34.437 151 91 2 491 641 1 143 1.84e-17 88.6
MsaG040104 AT2G25880.1 40.187 107 60 1 719 825 173 275 1.90e-17 84.3
MsaG040104 AT2G25880.1 35.762 151 91 2 494 642 25 171 5.52e-16 80.1
MsaG040104 AT2G25880.4 40.187 107 60 1 719 825 186 288 2.26e-17 84.3
MsaG040104 AT2G25880.4 35.762 151 91 2 494 642 38 184 1.02e-15 79.3
MsaG040104 AT2G25880.3 40.187 107 60 1 719 825 234 336 5.31e-17 84.0
MsaG040104 AT2G25880.3 35.762 151 91 2 494 642 86 232 2.99e-15 78.6
MsaG040104 AT5G45810.1 33.951 162 104 2 480 641 14 172 8.47e-17 84.7
MsaG040104 AT4G18700.1 35.948 153 95 2 489 641 21 170 1.19e-16 84.3
MsaG040104 AT4G32830.1 38.318 107 62 1 719 825 179 281 1.88e-16 81.6
MsaG040104 AT4G32830.1 35.762 151 91 2 494 642 31 177 1.58e-15 78.6
MsaG040104 AT2G45490.2 33.766 154 98 2 491 643 19 169 3.34e-16 79.7
MsaG040104 AT2G45490.2 40.244 82 49 0 722 803 173 254 2.43e-13 71.6
MsaG040104 AT5G25110.1 33.108 148 96 1 494 641 43 187 3.69e-16 82.8
MsaG040104 AT1G12680.1 34.416 154 91 4 498 650 111 255 3.83e-16 82.8
MsaG040104 AT4G14580.1 33.333 156 101 3 487 641 14 167 1.20e-15 80.9
MsaG040104 AT1G29230.1 35.811 148 92 2 494 641 74 218 1.44e-15 81.3
MsaG040104 AT4G24400.1 30.675 163 107 2 494 654 9 167 3.88e-15 79.3
MsaG040104 AT4G24400.2 30.675 163 107 2 494 654 9 167 4.19e-15 79.0
MsaG040104 AT5G01810.1 34.416 154 97 3 488 641 7 156 6.75e-15 78.6
MsaG040104 AT5G01810.2 34.416 154 97 3 488 641 7 156 6.75e-15 78.6
MsaG040104 AT5G10930.1 35.762 151 89 6 494 641 12 157 6.78e-15 78.6
MsaG040104 AT5G10930.1 37.143 105 61 3 708 811 156 256 7.92e-11 65.9
MsaG040104 AT5G01810.3 34.416 154 97 3 488 641 7 156 1.05e-14 77.4
MsaG040104 AT1G09000.1 32.919 161 101 4 500 655 75 233 3.15e-14 77.4
MsaG040104 AT3G06030.1 36.486 148 85 5 500 641 74 218 3.66e-14 77.0
MsaG040104 AT1G09000.2 32.919 161 101 4 500 655 75 233 3.81e-14 77.0
MsaG040104 AT1G54960.1 32.692 156 98 3 500 650 74 227 3.83e-14 77.0
MsaG040104 AT1G54960.2 32.692 156 98 3 500 650 74 227 3.83e-14 77.0
MsaG040104 AT3G01090.2 30.693 202 113 5 446 641 7 187 9.75e-14 75.5
MsaG040104 AT3G23000.1 33.117 154 96 3 491 641 22 171 1.06e-13 74.7
MsaG040104 AT1G30270.1 33.333 150 94 4 494 641 31 176 1.60e-13 74.3
MsaG040104 AT3G29160.3 33.548 155 93 4 491 641 17 165 1.78e-13 73.6
MsaG040104 AT1G69220.1 31.788 151 94 3 494 641 249 393 2.41e-13 74.7
MsaG040104 AT1G30270.2 33.333 150 94 4 494 641 31 176 2.83e-13 73.6
MsaG040104 AT3G29160.1 33.548 155 93 4 491 641 17 165 3.10e-13 73.6
MsaG040104 AT3G29160.2 33.548 155 93 4 491 641 17 165 3.10e-13 73.6
MsaG040104 AT4G30960.1 35.065 154 95 3 490 641 18 168 3.11e-13 73.6
MsaG040104 AT1G70430.3 30.719 153 104 1 489 641 11 161 3.38e-13 73.9
MsaG040104 AT1G50240.3 35.922 103 60 2 725 827 161 257 3.38e-13 74.3
MsaG040104 AT1G50240.2 35.922 103 60 2 725 827 161 257 3.38e-13 74.3
MsaG040104 AT2G30360.1 33.557 149 96 3 494 641 21 167 4.01e-13 73.2
MsaG040104 AT1G70430.1 30.719 153 104 1 489 641 11 161 4.19e-13 73.6
MsaG040104 AT1G70430.4 30.719 153 104 1 489 641 11 161 4.27e-13 73.6
MsaG040104 AT5G58380.1 28.378 148 103 2 494 641 12 156 4.45e-13 73.2
MsaG040104 AT5G28290.1 30.519 154 101 3 491 641 1 151 5.09e-13 73.2
MsaG040104 AT5G28290.2 30.519 154 101 3 491 641 1 151 5.09e-13 73.2
MsaG040104 AT5G28290.3 30.519 154 101 3 491 641 1 151 5.58e-13 73.2
MsaG040104 AT3G04810.2 29.221 154 103 3 491 641 1 151 6.53e-13 72.8
MsaG040104 AT3G04810.1 29.221 154 103 3 491 641 1 151 6.53e-13 72.8
MsaG040104 AT3G04810.3 29.221 154 103 3 491 641 1 151 6.53e-13 72.8
MsaG040104 AT4G24100.1 29.333 150 104 1 492 641 31 178 6.55e-13 73.2
MsaG040104 AT3G01090.3 32.026 153 98 2 491 641 16 164 6.68e-13 72.8
MsaG040104 AT3G01090.1 32.026 153 98 2 491 641 16 164 6.68e-13 72.8
MsaG040104 AT3G17510.1 32.026 153 98 2 491 641 17 165 7.67e-13 72.0
MsaG040104 AT4G24100.2 29.333 150 104 1 492 641 31 178 7.89e-13 72.8
MsaG040104 AT1G01140.3 30.872 149 101 2 493 641 18 164 9.16e-13 72.0
MsaG040104 AT1G01140.2 30.872 149 101 2 493 641 18 164 9.42e-13 72.0
MsaG040104 AT4G24100.4 29.333 150 104 1 492 641 47 194 9.71e-13 72.8
MsaG040104 AT4G14480.1 31.544 149 99 2 494 641 15 161 9.78e-13 72.0
MsaG040104 AT1G01140.1 30.872 149 101 2 493 641 18 164 9.93e-13 71.6
MsaG040104 AT4G24100.3 29.333 150 104 1 492 641 47 194 1.09e-12 72.4
MsaG040104 AT5G14720.1 30.519 154 103 3 489 641 11 161 1.13e-12 72.4
MsaG040104 AT5G14720.2 30.519 154 103 3 489 641 11 161 1.13e-12 72.4
MsaG040104 AT4G09570.1 35.714 154 93 4 493 642 24 175 1.30e-12 71.6
MsaG040104 AT5G57630.2 27.673 159 107 3 487 641 2 156 1.42e-12 71.2
MsaG040104 AT2G26980.3 31.250 144 97 2 498 641 18 159 1.70e-12 70.9
MsaG040104 AT5G21326.1 30.667 150 98 2 494 641 13 158 1.78e-12 70.9
MsaG040104 AT5G57630.1 27.673 159 107 3 487 641 2 156 1.80e-12 70.9
MsaG040104 AT2G26980.4 31.250 144 97 2 498 641 28 169 1.97e-12 70.9
MsaG040104 AT2G26980.1 30.405 148 101 2 494 641 14 159 2.07e-12 70.5
MsaG040104 AT4G04720.2 34.286 105 62 3 726 828 241 340 2.38e-12 70.9
MsaG040104 AT4G04720.2 30.573 157 99 4 492 642 78 230 1.98e-11 68.2
MsaG040104 AT4G04720.1 34.286 105 62 3 726 828 241 340 2.38e-12 70.9
MsaG040104 AT4G04720.1 30.573 157 99 4 492 642 78 230 1.98e-11 68.2
MsaG040104 AT3G44200.2 29.747 158 97 4 491 641 5 155 3.41e-12 71.2
MsaG040104 AT3G44200.1 29.747 158 97 4 491 641 5 155 3.41e-12 71.2
MsaG040104 AT2G26980.5 30.405 148 101 2 494 641 14 159 4.08e-12 69.7
MsaG040104 AT5G35410.2 28.652 178 121 3 498 671 15 190 4.19e-12 69.3
MsaG040104 AT2G41860.2 33.117 154 95 4 494 642 54 204 4.52e-12 70.1
MsaG040104 AT2G41860.1 33.117 154 95 4 494 642 54 204 4.60e-12 70.1
MsaG040104 AT1G53570.7 33.333 156 100 3 498 651 218 371 5.18e-12 69.7
MsaG040104 AT1G53570.6 33.333 156 100 3 498 651 218 371 5.30e-12 69.7
MsaG040104 AT1G08650.1 35.922 103 60 2 727 827 176 274 5.81e-12 67.8
MsaG040104 AT1G35670.1 35.714 154 93 4 493 642 25 176 5.82e-12 69.7
MsaG040104 AT4G10730.2 28.667 150 105 1 492 641 25 172 5.84e-12 70.1
MsaG040104 AT2G26980.2 31.250 144 97 2 498 641 18 159 6.05e-12 67.4
MsaG040104 AT4G10730.1 28.667 150 105 1 492 641 45 192 6.49e-12 70.1
MsaG040104 AT1G79640.1 30.519 154 103 3 489 641 8 158 7.07e-12 69.7
MsaG040104 AT1G79640.6 30.519 154 103 3 489 641 8 158 7.14e-12 69.7
MsaG040104 AT1G79640.2 30.519 154 103 3 489 641 8 158 7.60e-12 69.7
MsaG040104 AT1G79640.4 30.519 154 103 3 489 641 8 158 7.60e-12 69.7
MsaG040104 AT1G79640.3 30.519 154 103 3 489 641 8 158 7.60e-12 69.7
MsaG040104 AT1G79640.5 30.519 154 103 3 489 641 11 161 7.69e-12 69.7
MsaG040104 AT1G53570.4 33.333 156 100 3 498 651 218 371 8.86e-12 69.3
MsaG040104 AT1G53165.1 30.201 149 100 2 493 641 14 158 8.87e-12 69.3
MsaG040104 AT1G53570.1 33.333 156 100 3 498 651 218 371 9.02e-12 69.3
MsaG040104 AT1G53570.2 33.333 156 100 3 498 651 218 371 9.17e-12 69.3
MsaG040104 AT1G53570.3 33.333 156 100 3 498 651 218 371 9.17e-12 69.3
MsaG040104 AT1G53165.2 30.201 149 100 2 493 641 14 158 1.03e-11 69.3
MsaG040104 AT1G53165.3 30.201 149 100 2 493 641 14 158 1.06e-11 69.3
MsaG040104 AT5G39420.1 33.708 178 95 6 476 641 85 251 1.09e-11 68.9
MsaG040104 AT5G35410.1 28.652 178 121 3 498 671 15 190 1.11e-11 68.6
MsaG040104 AT5G39440.1 32.026 153 98 2 491 641 16 164 1.29e-11 68.6
MsaG040104 AT1G08650.2 38.462 91 54 1 727 815 176 266 1.70e-11 66.2
MsaG040104 AT2G38490.1 35.294 153 86 5 494 641 28 172 1.92e-11 67.8
MsaG040104 AT1G73500.1 33.557 149 86 5 497 641 50 189 3.13e-11 65.9
MsaG040104 AT1G69220.2 31.690 142 88 3 503 641 231 366 3.81e-11 67.4
MsaG040104 AT3G20860.1 26.351 148 108 1 494 641 4 150 4.24e-11 66.6
MsaG040104 AT1G54510.4 27.848 158 100 4 491 641 1 151 4.34e-11 67.0
MsaG040104 AT1G54510.2 27.848 158 100 4 491 641 1 151 4.34e-11 67.0
MsaG040104 AT1G54510.1 27.848 158 100 4 491 641 1 151 4.34e-11 67.0
MsaG040104 AT1G54510.3 27.848 158 100 4 491 641 1 151 4.34e-11 67.0
MsaG040104 AT3G15220.1 29.530 149 101 2 493 641 14 158 6.73e-11 66.6
MsaG040104 AT3G06630.6 27.511 229 149 9 420 641 277 495 6.79e-11 66.2
MsaG040104 AT1G32320.1 32.877 146 88 3 497 641 51 187 6.83e-11 65.1
MsaG040104 AT5G01820.1 32.164 171 112 3 494 663 22 189 7.51e-11 65.9
MsaG040104 AT4G21940.3 32.381 105 64 3 726 828 263 362 7.79e-11 65.9
MsaG040104 AT4G29810.1 29.670 182 117 5 489 664 65 241 7.81e-11 65.5
MsaG040104 AT4G21940.2 32.381 105 64 3 726 828 263 362 7.90e-11 66.2
MsaG040104 AT3G04530.1 34.444 90 57 1 727 814 172 261 8.41e-11 64.3
MsaG040104 AT4G21940.1 32.381 105 64 3 726 828 263 362 9.05e-11 65.9
MsaG040104 AT4G29810.2 29.670 182 117 5 489 664 74 250 9.08e-11 65.1

Find 192 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGACCCTGCAAAAGTTTC+TGG 0.125540 7:-96744285 MsaT040104.1:CDS
CTTATAATGGGTTCATTATC+TGG 0.185806 7:-96747099 None:intergenic
TCTTCATCTACTTCTGTTAA+TGG 0.190386 7:-96746196 MsaT040104.1:CDS
AAGTTGTTTGTTTGCTATTA+AGG 0.198997 7:-96745546 MsaT040104.1:CDS
CCTTCTTTGAGGGCCTTAAC+TGG 0.203909 7:-96743783 MsaT040104.1:CDS
TAAATCTTCGTCAAGGGATT+TGG 0.227541 7:-96746893 MsaT040104.1:CDS
TATGGAAGAACACCCTTTAA+AGG 0.228797 7:-96743973 MsaT040104.1:CDS
AATTTCCCAAGCAGAATTAA+TGG 0.232061 7:+96746480 None:intergenic
CCACTATTTGATGCCGAATA+AGG 0.242303 7:+96745881 None:intergenic
GTATATCTTGCCGAACTAAT+TGG 0.258000 7:-96745572 MsaT040104.1:CDS
TTCGTTGTTAGAACCTTTAA+AGG 0.262732 7:+96743960 None:intergenic
TCAAATGCAGCACGGAGTTT+TGG 0.266992 7:-96745648 MsaT040104.1:CDS
GTAGATGAAGCCAGTCATTC+TGG 0.275052 7:-96746631 MsaT040104.1:CDS
CTCCCAACCTCTGATATTCT+TGG 0.292781 7:+96746679 None:intergenic
AAAGTGGCTGTGTCAAATTC+TGG 0.304036 7:-96746247 MsaT040104.1:CDS
ATCAGATAATCTTTCATGTT+TGG 0.320095 7:-96745408 MsaT040104.1:CDS
TCACAAAACTCTGGAAGTTC+TGG 0.320243 7:+96743736 None:intergenic
TAGTTCATATAAACCTTATT+CGG 0.320252 7:-96745894 MsaT040104.1:CDS
TCCCTCTTCTTTGATGATCT+CGG 0.339230 7:+96744050 None:intergenic
TGACTTCGATAGCCGTTTCA+TGG 0.341012 7:+96746711 None:intergenic
TGCAGCAGCAGGTAGGAATC+TGG 0.342721 7:+96744191 None:intergenic
TGGGATAGCGCAACGAATTA+AGG 0.347741 7:+96743759 None:intergenic
CCTGCAAAAGTTTCTGGGCT+TGG 0.357846 7:-96744279 MsaT040104.1:CDS
AAGAGACCTTTGTATATCTA+AGG 0.360898 7:-96746749 MsaT040104.1:CDS
GCAACTAATCAACTTCATTC+CGG 0.361763 7:-96746451 MsaT040104.1:CDS
AAATCTTCGTCAAGGGATTT+GGG 0.363293 7:-96746892 MsaT040104.1:CDS
CTTGACTCGATGATGTGATT+TGG 0.370252 7:+96746503 None:intergenic
CAACTAATCAACTTCATTCC+GGG 0.385324 7:-96746450 MsaT040104.1:CDS
TACCCCTCGCACAATTAAAA+TGG 0.385499 7:-96746146 MsaT040104.1:CDS
GAAGCCTTTGGCGCCGAACT+TGG 0.389707 7:-96746971 MsaT040104.1:CDS
TCTCTTTCAGTTTGAGCCCT+AGG 0.392053 7:+96745485 None:intergenic
GCTGCGGAAGTGATTTGATC+TGG 0.393762 7:+96744136 None:intergenic
TTGCTAACTTCATTTGATGT+AGG 0.395873 7:+96746058 None:intergenic
TGTTCCTGGCACAGCTCAGC+TGG 0.396521 7:-96746032 MsaT040104.1:CDS
CCCTCTTCTTTGATGATCTC+GGG 0.399717 7:+96744051 None:intergenic
TAAAGAACCTGAAAACCGTT+TGG 0.399794 7:-96743842 MsaT040104.1:CDS
AAAGAACCTGAAAACCGTTT+GGG 0.404163 7:-96743841 MsaT040104.1:CDS
GCAGTTGACTGGTGGACATT+TGG 0.407061 7:-96744018 MsaT040104.1:CDS
AAACTGACAAATGGGTCATC+AGG 0.408407 7:+96743898 None:intergenic
CTACTTCTGTTAATGGCAGC+AGG 0.408734 7:-96746189 MsaT040104.1:CDS
TTGACCCTGCAAAAGTTTCT+GGG 0.409809 7:-96744284 MsaT040104.1:CDS
CTCGAGTTGCTCTTTCAACT+TGG 0.411286 7:+96745811 None:intergenic
TTGACTCGATGATGTGATTT+GGG 0.412748 7:+96746504 None:intergenic
GAAGCAAGGGATCTGATTAG+AGG 0.414156 7:-96743874 MsaT040104.1:CDS
GCATCAAATAGTGGTAATAT+AGG 0.414196 7:-96745872 MsaT040104.1:CDS
GAAAGAGATGGAGAAGATGC+AGG 0.415026 7:+96746334 None:intergenic
CTTGTGAAATAGTTGAAGTA+AGG 0.416302 7:-96747074 MsaT040104.1:CDS
GAAGTTAGCAAGTCTGTTCC+TGG 0.420252 7:-96746046 MsaT040104.1:CDS
TTATCCTTGTATCCCAAGTT+CGG 0.420923 7:+96746958 None:intergenic
ACCGTTTGGGTTCACAGAAA+GGG 0.426464 7:-96743828 MsaT040104.1:CDS
GTAAGGGAGGACCGAAGTAT+AGG 0.428533 7:-96747057 MsaT040104.1:CDS
TGCTGAAGTCCTCCTTGCTC+TGG 0.431428 7:-96744454 MsaT040104.1:CDS
GAAGATGATTTCAGAAGTGT+TGG 0.433733 7:+96744312 None:intergenic
TCCTTCACTTTCTTCTTACT+CGG 0.433818 7:+96746106 None:intergenic
AACCGTTTGGGTTCACAGAA+AGG 0.433843 7:-96743829 MsaT040104.1:CDS
AAACTGAAAGAGAAATCTTA+AGG 0.434080 7:-96745475 MsaT040104.1:CDS
CTTGCTTCGAAACTGACAAA+TGG 0.436089 7:+96743889 None:intergenic
AACGTGGTGTTGCAAAGTCT+TGG 0.438682 7:-96743925 MsaT040104.1:CDS
GGCGCCGAACTTGGGATACA+AGG 0.441090 7:-96746962 MsaT040104.1:CDS
CCCCTTTCTGTGAACCCAAA+CGG 0.443431 7:+96743827 None:intergenic
CTTCTTTGAGGGCCTTAACT+GGG 0.444338 7:-96743782 MsaT040104.1:CDS
CTGGAGTACTTGCACATGCT+TGG 0.444876 7:-96744435 MsaT040104.1:CDS
CTCACATGTCAAAGGATGTT+AGG 0.445016 7:-96745691 MsaT040104.1:CDS
GTCAAGCCATTAATTCTGCT+TGG 0.448741 7:-96746486 MsaT040104.1:CDS
AAACAACATCCCTTCTTTGA+GGG 0.448791 7:-96743793 MsaT040104.1:CDS
TAAACAACATCCCTTCTTTG+AGG 0.449894 7:-96743794 MsaT040104.1:CDS
ACAACTTGTGCCAATTAGTT+CGG 0.452164 7:+96745562 None:intergenic
AAACCAAGAGGTAATGGCCT+TGG 0.452675 7:-96745963 MsaT040104.1:CDS
AACTTGGTTGCGGAGACATT+GGG 0.453030 7:-96745598 MsaT040104.1:CDS
CTCACATTGCTGAGAGTAAA+GGG 0.453463 7:-96746606 MsaT040104.1:CDS
CCTTATTCGGCATCAAATAG+TGG 0.454819 7:-96745881 MsaT040104.1:CDS
GCCTCAGAATTTCCAACTTG+TGG 0.457023 7:+96746793 None:intergenic
TTTGTTTGCTATTAAGGTCA+TGG 0.458965 7:-96745540 MsaT040104.1:CDS
TCGTTGTTAGAACCTTTAAA+GGG 0.461755 7:+96743961 None:intergenic
CCAGTTAAGGCCCTCAAAGA+AGG 0.464694 7:+96743783 None:intergenic
GACATGGTGCTGCAGTTGAC+TGG 0.470051 7:-96744029 MsaT040104.1:CDS
TCAAGCCATTAATTCTGCTT+GGG 0.470973 7:-96746485 MsaT040104.1:CDS
CTCCAAGAATATCAGAGGTT+GGG 0.472794 7:-96746681 MsaT040104.1:CDS
TAAGGGAGGACCGAAGTATA+GGG 0.475161 7:-96747056 MsaT040104.1:CDS
AAACTTGGTTGCGGAGACAT+TGG 0.477930 7:-96745599 MsaT040104.1:CDS
AATGTGAGGCCCAGAATGAC+TGG 0.478847 7:+96746621 None:intergenic
AAGAGAAATCTTAAGGATGC+TGG 0.478853 7:-96745468 MsaT040104.1:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.478857 7:-96744384 MsaT040104.1:CDS
GCATGTTCATCAAGTAGAGT+TGG 0.490616 7:-96746403 MsaT040104.1:CDS
GCAAGGTCAAACTCATTTGT+TGG 0.491148 7:-96744093 MsaT040104.1:CDS
TTGCTTCGAAACTGACAAAT+GGG 0.494305 7:+96743890 None:intergenic
TAATCTTTCATGTTTGGTCA+TGG 0.496468 7:-96745402 MsaT040104.1:CDS
AACGAATTAAGGCCCAGTTA+AGG 0.498983 7:+96743770 None:intergenic
TGAGGCTGTTAATTTGAAGC+AGG 0.499020 7:-96746776 MsaT040104.1:CDS
AAGCCTTTGGCGCCGAACTT+GGG 0.499377 7:-96746970 MsaT040104.1:CDS
CCTCACATTGCTGAGAGTAA+AGG 0.499547 7:-96746607 MsaT040104.1:CDS
TAGATGAAGCCAGTCATTCT+GGG 0.502546 7:-96746630 MsaT040104.1:CDS
AAAGAGATGGAGAAGATGCA+GGG 0.503869 7:+96746335 None:intergenic
ACATACAATGTAGGAAGAAA+CGG 0.506468 7:+96745440 None:intergenic
CAAAACTCTGGAAGTTCTGG+TGG 0.511828 7:+96743739 None:intergenic
TTGGTCATGGAGTATTGTCC+AGG 0.511859 7:-96745389 MsaT040104.1:CDS
AGTCCAAGGCCATTACCTCT+TGG 0.513277 7:+96745960 None:intergenic
CATTTGTCAGTTTCGAAGCA+AGG 0.515485 7:-96743888 MsaT040104.1:CDS
GAAGGGATGTTGTTTAATCT+CGG 0.518458 7:+96743801 None:intergenic
GTTGCTCTCATCACTGGTAC+TGG 0.520179 7:+96745742 None:intergenic
GCAGCAGCAGGTAGGAATCT+GGG 0.520999 7:+96744192 None:intergenic
AAGATGATTTCAGAAGTGTT+GGG 0.524500 7:+96744313 None:intergenic
AGACATGGCATCACAAGGCA+AGG 0.531541 7:-96743701 MsaT040104.1:CDS
GTAAATTGCACATACAATGT+AGG 0.536796 7:+96745431 None:intergenic
ACTCCAAAATCACAAAACTC+TGG 0.536947 7:+96743727 None:intergenic
TCTCCAAGAATATCAGAGGT+TGG 0.537092 7:-96746682 MsaT040104.1:CDS
ATTTGTCAGTTTCGAAGCAA+GGG 0.537336 7:-96743887 MsaT040104.1:CDS
CATGTTCATCAAGTAGAGTT+GGG 0.537659 7:-96746402 MsaT040104.1:CDS
GTGGAGATCTTCATGTTCTA+CGG 0.539228 7:-96745367 MsaT040104.1:CDS
ACTCATGTTGCTCTCATCAC+TGG 0.540951 7:+96745736 None:intergenic
CAGAAGTGGCTTCCATGAAA+CGG 0.541059 7:-96746723 MsaT040104.1:CDS
TGAGTTTGACCTTGCATCAG+TGG 0.542160 7:+96744101 None:intergenic
CAAATCACTTCCGCAGCTTG+TGG 0.542273 7:-96744130 MsaT040104.1:CDS
AAGTATTTAGAATGTAATGT+AGG 0.542356 7:-96743673 MsaT040104.1:CDS
TATCCCAAGTTCGGCGCCAA+AGG 0.543142 7:+96746967 None:intergenic
AAGAGATGGAGAAGATGCAG+GGG 0.543229 7:+96746336 None:intergenic
GTGGGCTCAGCCACAAGCTG+CGG 0.549030 7:+96744120 None:intergenic
CCGTTTGGGTTCACAGAAAG+GGG 0.549500 7:-96743827 MsaT040104.1:CDS
CTGCGGAAGTGATTTGATCT+GGG 0.549511 7:+96744137 None:intergenic
TGCTCGTAAATCTTCGTCAA+GGG 0.550429 7:-96746899 MsaT040104.1:CDS
CAAACCAGCTGAGCTGTGCC+AGG 0.551137 7:+96746028 None:intergenic
CACGAAGGAAGAAGATGCCT+AGG 0.551195 7:-96745502 MsaT040104.1:CDS
GACTCTACTAGTCCTGAAAA+CGG 0.555023 7:-96745941 MsaT040104.1:CDS
CGCGGAACACCCATTGTCAT+CGG 0.556845 7:+96746820 None:intergenic
GATTTGGGCATTTCACAAGA+TGG 0.557675 7:-96746877 MsaT040104.1:CDS
AGGCAAAGCAGTTGCAAAGG+TGG 0.561015 7:-96745852 MsaT040104.1:CDS
GTTCTACGGCAGAAGCAGCT+TGG 0.568148 7:-96745353 MsaT040104.1:CDS
TAGCGCCTTTCCCTATACTT+CGG 0.571577 7:+96747046 None:intergenic
GCCCGAGATCATCAAAGAAG+AGG 0.573356 7:-96744052 MsaT040104.1:CDS
CAAAGCTCAAAGAGTAGTCA+AGG 0.574719 7:-96745782 MsaT040104.1:CDS
GTGGCTCAAGTTGCGGCAGT+AGG 0.575395 7:-96745715 MsaT040104.1:CDS
GTTCCGCGGTCTCCACAAGT+TGG 0.575962 7:-96746805 MsaT040104.1:CDS
AACATGAGTGGCTCAAGTTG+CGG 0.579849 7:-96745722 MsaT040104.1:CDS
CATGTCAAAGGATGTTAGGT+GGG 0.580069 7:-96745687 MsaT040104.1:CDS
CAAATTCTGGACGGAAAGGT+AGG 0.580343 7:-96746234 MsaT040104.1:CDS
AACTGACAAATGGGTCATCA+GGG 0.581948 7:+96743899 None:intergenic
TGAGAGTAAAGGGCGAAGAA+TGG 0.582038 7:-96746596 MsaT040104.1:CDS
TTCAGGACTAGTAGAGTCCA+AGG 0.582296 7:+96745946 None:intergenic
TTGTGAAATAGTTGAAGTAA+GGG 0.583379 7:-96747073 MsaT040104.1:CDS
TATATCTAAGGCATCAGAAG+TGG 0.584137 7:-96746737 MsaT040104.1:CDS
TTGCTCGTAAATCTTCGTCA+AGG 0.584306 7:-96746900 MsaT040104.1:CDS
GTGATTTGATCTGGGCTAGA+GGG 0.584549 7:+96744145 None:intergenic
CAGTTAAGGCCCTCAAAGAA+GGG 0.585077 7:+96743784 None:intergenic
AGTGATTTGATCTGGGCTAG+AGG 0.588987 7:+96744144 None:intergenic
CGAAGAAACATTAGCAAACG+TGG 0.592187 7:-96743941 MsaT040104.1:CDS
ACTTCGCGACGATGAAGTCC+CGG 0.592583 7:+96746432 None:intergenic
CCCGAGATCATCAAAGAAGA+GGG 0.593180 7:-96744051 MsaT040104.1:CDS
TACTTCTGTTAATGGCAGCA+GGG 0.594412 7:-96746188 MsaT040104.1:CDS
CCTTTACTCTCAGCAATGTG+AGG 0.595127 7:+96746607 None:intergenic
TCAGCTGTATTAGAAAGAGA+TGG 0.598305 7:+96746322 None:intergenic
AAGCAAGGGATCTGATTAGA+GGG 0.598406 7:-96743873 MsaT040104.1:CDS
AAGCATGAAACTTGACAAGT+TGG 0.599073 7:+96744219 None:intergenic
AGCTGGTTTGTGAAAGATGT+AGG 0.599964 7:-96746015 MsaT040104.1:CDS
CTGCATTTGAGCATGTCGAA+TGG 0.600200 7:+96745661 None:intergenic
CAGTAGGCCTCACATGTCAA+AGG 0.602441 7:-96745699 MsaT040104.1:CDS
GTGTCAAATTCTGGACGGAA+AGG 0.603775 7:-96746238 MsaT040104.1:CDS
TGGCTGAGCCCACTGATGCA+AGG 0.607749 7:-96744110 MsaT040104.1:CDS
GAGTTTGACCTTGCATCAGT+GGG 0.609693 7:+96744102 None:intergenic
GAGTAAGAAGAAAGTGAAGG+AGG 0.611485 7:-96746104 MsaT040104.1:CDS
CAAGAATATCAGAGGTTGGG+AGG 0.611585 7:-96746678 MsaT040104.1:CDS
TCCACAAGTTGGAAATTCTG+AGG 0.619594 7:-96746794 MsaT040104.1:CDS
TATAGGCAAAGCAGTTGCAA+AGG 0.620210 7:-96745855 MsaT040104.1:CDS
ACATGTCAAAGGATGTTAGG+TGG 0.622053 7:-96745688 MsaT040104.1:CDS
GAGGACCGAAGTATAGGGAA+AGG 0.622415 7:-96747051 MsaT040104.1:CDS
TGTGCAAGTACTCCAGAGCA+AGG 0.622812 7:+96744442 None:intergenic
AGCTTCTCCAAGAATATCAG+AGG 0.624562 7:-96746686 MsaT040104.1:CDS
CAAAATCAGTGAGCATAATG+TGG 0.625195 7:+96744361 None:intergenic
TCCGAGTAAGAAGAAAGTGA+AGG 0.625965 7:-96746107 MsaT040104.1:CDS
TGAAATAGTTGAAGTAAGGG+AGG 0.632516 7:-96747070 MsaT040104.1:CDS
GTCATGGAGTATTGTCCAGG+TGG 0.637510 7:-96745386 MsaT040104.1:CDS
ATGGTGCTGCAGTTGACTGG+TGG 0.645771 7:-96744026 MsaT040104.1:CDS
CTGATGCCTTAGATATACAA+AGG 0.647139 7:+96746743 None:intergenic
GTGCGCTTTAGAAGATACAA+AGG 0.647872 7:-96745993 MsaT040104.1:CDS
AAAACTCTGGAAGTTCTGGT+GGG 0.647935 7:+96743740 None:intergenic
ATTGTGCGAGGGGTATGGTG+TGG 0.650294 7:+96746154 None:intergenic
TTTCCAACTTGTGGAGACCG+CGG 0.651926 7:+96746802 None:intergenic
ACGAAGGAAGAAGATGCCTA+GGG 0.654290 7:-96745501 MsaT040104.1:CDS
GACATGGCATCACAAGGCAA+GGG 0.654668 7:-96743700 MsaT040104.1:CDS
TGGCTGTGTCAAATTCTGGA+CGG 0.655084 7:-96746243 MsaT040104.1:CDS
CGATGACAATGGGTGTTCCG+CGG 0.658695 7:-96746819 MsaT040104.1:CDS
TGGGTCTCAATCACAGCGTG+TGG 0.662415 7:-96746383 MsaT040104.1:CDS
ATGTAATGTAGGACAGCACG+TGG 0.664748 7:-96743662 MsaT040104.1:CDS
GATACAGACATTGTACAGTA+CGG 0.668230 7:-96746656 MsaT040104.1:CDS
AGAACATGAAGATCTCCACC+TGG 0.672619 7:+96745371 None:intergenic
CGACATGCTCAAATGCAGCA+CGG 0.673800 7:-96745656 MsaT040104.1:CDS
CTAACATCCTTTGACATGTG+AGG 0.674925 7:+96745692 None:intergenic
ATCATCAAAGAAGAGGGACA+TGG 0.679492 7:-96744045 MsaT040104.1:CDS
AGTGATGAGAGCAACATGAG+TGG 0.682879 7:-96745734 MsaT040104.1:CDS
CAAGTTGGTTGAATGCACAA+TGG 0.726400 7:+96744234 None:intergenic
ACAGACATTGTACAGTACGG+TGG 0.732794 7:-96746653 MsaT040104.1:CDS
ACAATGTAGGAAGAAACGGA+TGG 0.735708 7:+96745444 None:intergenic
GCAAGTACTCCAGAGCAAGG+AGG 0.758663 7:+96744445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 96743645 96747115 96743645 ID=MsaG040104
Chr7 mRNA 96743645 96747115 96743645 ID=MsaT040104.1;Parent=MsaG040104
Chr7 exon 96743645 96744485 96743645 ID=MsaT040104.1.exon2;Parent=MsaT040104.1
Chr7 CDS 96743645 96744485 96743645 ID=cds.MsaT040104.1;Parent=MsaT040104.1
Chr7 exon 96745326 96747115 96745326 ID=MsaT040104.1.exon1;Parent=MsaT040104.1
Chr7 CDS 96745326 96747115 96745326 ID=cds.MsaT040104.1;Parent=MsaT040104.1
Gene Sequence

>MsaT040104.1

ATGGGTTCATTATCTGGCACTTGTGAAATAGTTGAAGTAAGGGAGGACCGAAGTATAGGGAAAGGCGCTATACAGATTTGCCAGTCCAAGTCTCAGAACAAAATGTCTGAGAAAAAAAATAAGAAGCCTTTGGCGCCGAACTTGGGATACAAGGATAAAATCGATGATGAAATTAACAAGCTGTTTCAATCAATTGCTCGTAAATCTTCGTCAAGGGATTTGGGCATTTCACAAGATGGTACAAGTCATAAGCTGAAAAACACCTTAAAAAAGCCGATGACAATGGGTGTTCCGCGGTCTCCACAAGTTGGAAATTCTGAGGCTGTTAATTTGAAGCAGGCACTAAGAGACCTTTGTATATCTAAGGCATCAGAAGTGGCTTCCATGAAACGGCTATCGAAGTCAATAGCTTCTCCAAGAATATCAGAGGTTGGGAGGATACAGACATTGTACAGTACGGTGGTAGATGAAGCCAGTCATTCTGGGCCTCACATTGCTGAGAGTAAAGGGCGAAGAATGGAAATATCTCTAGTGTCAGAAAAAAGCCAGTCACTCTCATTCAATAAAACATCTCAATCTCATCAAACTACCCAAATCACATCATCGAGTCAAGCCATTAATTCTGCTTGGGAAATTGCTGTTGCAACTAATCAACTTCATTCCGGGACTTCATCGTCGCGAAGTGATGCAGCATGTTCATCAAGTAGAGTTGGGTCTCAATCACAGCGTGTGGTACCTGTTCAACCAGAAAAGCAAACCCCTGCATCTTCTCCATCTCTTTCTAATACAGCTGAAAGCAAATTAGAGTTGTCTGTAAATGCTTCTTCACCTAAAAAGTTAGGTAATAAAGTGGCTGTGTCAAATTCTGGACGGAAAGGTAGGTTGCAGACAGCATCTTCTTCATCTACTTCTGTTAATGGCAGCAGGGTTAACAAACAACCACACCATACCCCTCGCACAATTAAAATGGTCATCAAGAACAAAAATCCGAGTAAGAAGAAAGTGAAGGAGGATTCAGTTTCTGCATCATGTGATCCTACATCAAATGAAGTTAGCAAGTCTGTTCCTGGCACAGCTCAGCTGGTTTGTGAAAGATGTAGGTGCGCTTTAGAAGATACAAAGGAAGAAAAAAACCAAGAGGTAATGGCCTTGGACTCTACTAGTCCTGAAAACGGAGTGAACTTCAGTAACGTGCACTCTAGTTCATATAAACCTTATTCGGCATCAAATAGTGGTAATATAGGCAAAGCAGTTGCAAAGGTGGAGAAGATTCAGAAGAACACCAAGTTGAAAGAGCAACTCGAGTTCTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACCAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTGCGGCAGTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCAGCACGGAGTTTTGGGTTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGCGGAGACATTGGGACTGTATATCTTGCCGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATCTTAAGGATGCTGGACCATCCGTTTCTTCCTACATTGTATGTGCAATTTACATCAGATAATCTTTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTTTCAGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTCTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCGTTGAGGTGTGCTGTTAGCCCAACACTTCTGAAATCATCTTCTAATATTGACCCTGCAAAAGTTTCTGGGCTTGGTGCACAATCAAGTTGCATTGAGCCATTGTGCATTCAACCAACTTGTCAAGTTTCATGCTTCAGTCCCAGATTCCTACCTGCTGCTGCAAAAGCAAGAAAATTAAAAGTCGACCCTCTAGCCCAGATCAAATCACTTCCGCAGCTTGTGGCTGAGCCCACTGATGCAAGGTCAAACTCATTTGTTGGTACACATGAATACTTAGCGCCCGAGATCATCAAAGAAGAGGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTTAAAGGTTCTAACAACGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTGGATTCCCTGATGACCCATTTGTCAGTTTCGAAGCAAGGGATCTGATTAGAGGGTTGTTAGTTAAAGAACCTGAAAACCGTTTGGGTTCACAGAAAGGGGCTGCCGAGATTAAACAACATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACATGGCATCACAAGGCAAGGGTGCAAAGTATTTAGAATGTAATGTAGGACAGCACGTGGAATTCGAGTTGTTTTAA
Protein sequence

>MsaT040104.1

MGSLSGTCEIVEVREDRSIGKGAIQICQSKSQNKMSEKKNKKPLAPNLGYKDKIDDEINKLFQSIARKSSSRDLGISQDGTSHKLKNTLKKPMTMGVPRSPQVGNSEAVNLKQALRDLCISKASEVASMKRLSKSIASPRISEVGRIQTLYSTVVDEASHSGPHIAESKGRRMEISLVSEKSQSLSFNKTSQSHQTTQITSSSQAINSAWEIAVATNQLHSGTSSSRSDAACSSSRVGSQSQRVVPVQPEKQTPASSPSLSNTAESKLELSVNASSPKKLGNKVAVSNSGRKGRLQTASSSSTSVNGSRVNKQPHHTPRTIKMVIKNKNPSKKKVKEDSVSASCDPTSNEVSKSVPGTAQLVCERCRCALEDTKEEKNQEVMALDSTSPENGVNFSNVHSSSYKPYSASNSGNIGKAVAKVEKIQKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCGSRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSNIDPAKVSGLGAQSSCIEPLCIQPTCQVSCFSPRFLPAAAKARKLKVDPLAQIKSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEARDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPEFCDFGVLDMASQGKGAKYLECNVGQHVEFELF*