AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG040218

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040218 MtrunA17_Chr7g0267481 97.001 667 13 1 1 667 1 660 0.0 1336
MsaG040218 MtrunA17_Chr1g0177751 67.054 689 165 20 1 667 1 649 0.0 814
MsaG040218 MtrunA17_Chr4g0025521 45.455 759 274 24 1 667 1 711 9.34e-165 489
MsaG040218 MtrunA17_Chr1g0155681 56.146 301 97 8 153 433 146 431 4.22e-100 319
MsaG040218 MtrunA17_Chr3g0141941 54.676 278 94 6 172 435 163 422 2.16e-92 296
MsaG040218 MtrunA17_Chr8g0373801 53.929 280 122 2 172 447 389 665 1.35e-86 289
MsaG040218 MtrunA17_Chr5g0403251 46.061 330 156 4 172 490 339 657 3.36e-86 286
MsaG040218 MtrunA17_Chr8g0387321 52.416 269 115 4 160 421 170 432 9.81e-81 268
MsaG040218 MtrunA17_Chr3g0141931 46.622 296 129 7 169 451 163 442 1.63e-71 238
MsaG040218 MtrunA17_Chr4g0028701 42.724 323 142 7 174 458 248 565 5.89e-68 234
MsaG040218 MtrunA17_Chr4g0008591 42.675 314 137 6 175 481 200 477 3.32e-65 226
MsaG040218 MtrunA17_Chr7g0240371 43.796 274 129 6 175 445 141 392 2.68e-62 216
MsaG040218 MtrunA17_Chr2g0327021 38.253 332 165 7 118 430 201 511 1.72e-61 216
MsaG040218 MtrunA17_Chr1g0151681 38.519 270 132 7 172 427 244 493 1.47e-48 178
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040218 AT2G35940.3 48.797 748 234 33 1 667 1 680 8.18e-170 501
MsaG040218 AT2G35940.1 48.797 748 234 33 1 667 1 680 8.18e-170 501
MsaG040218 AT2G35940.2 48.797 748 234 33 1 667 1 680 8.18e-170 501
MsaG040218 AT2G16400.1 52.769 307 113 5 163 455 98 386 1.05e-96 306
MsaG040218 AT4G34610.2 52.308 325 129 7 132 446 94 402 1.50e-92 297
MsaG040218 AT4G34610.4 52.308 325 129 7 132 446 94 402 1.50e-92 297
MsaG040218 AT4G34610.3 52.308 325 129 7 132 446 94 402 1.50e-92 297
MsaG040218 AT4G34610.1 52.308 325 129 7 132 446 94 402 1.50e-92 297
MsaG040218 AT1G75410.1 53.608 291 114 7 172 458 168 441 3.21e-92 296
MsaG040218 AT1G75410.2 53.608 291 114 7 172 458 168 441 3.21e-92 296
MsaG040218 AT1G19700.1 55.017 289 112 8 162 441 156 435 2.32e-89 289
MsaG040218 AT1G19700.3 55.017 289 112 8 162 441 156 435 2.32e-89 289
MsaG040218 AT1G19700.5 55.017 289 112 8 162 441 156 435 2.32e-89 289
MsaG040218 AT1G19700.4 55.017 289 112 8 162 441 156 435 2.32e-89 289
MsaG040218 AT1G19700.2 55.017 289 112 8 162 441 156 435 2.32e-89 289
MsaG040218 AT2G27220.1 51.211 289 98 7 157 442 64 312 2.76e-82 267
MsaG040218 AT2G27220.3 51.211 289 98 7 157 442 64 312 2.76e-82 267
MsaG040218 AT4G36870.2 49.502 301 124 5 170 449 310 603 2.95e-79 267
MsaG040218 AT4G36870.1 49.502 301 124 5 170 449 310 603 2.95e-79 267
MsaG040218 AT2G27220.2 48.208 307 98 8 157 442 64 330 2.02e-78 257
MsaG040218 AT2G23760.2 50.758 264 117 3 169 425 234 491 3.49e-76 256
MsaG040218 AT2G23760.1 50.758 264 117 3 169 425 234 491 3.49e-76 256
MsaG040218 AT2G23760.3 50.758 264 117 3 169 425 234 491 3.49e-76 256
MsaG040218 AT5G41410.1 44.795 317 161 5 170 472 192 508 4.81e-76 255
MsaG040218 AT1G75410.3 53.361 238 95 6 172 405 168 393 2.62e-73 242
MsaG040218 AT2G23760.4 42.405 316 117 4 169 425 234 543 3.57e-66 230
MsaG040218 AT4G36870.4 49.180 244 110 4 170 406 310 546 4.64e-63 219
MsaG040218 AT4G36870.3 48.347 242 111 4 170 404 310 544 6.29e-62 216
MsaG040218 AT1G75430.1 40.830 289 143 7 172 448 17 289 1.29e-60 205
MsaG040218 AT5G02030.1 54.595 185 75 3 253 428 234 418 3.39e-57 204
MsaG040218 AT4G32980.1 39.700 267 142 5 172 437 202 450 7.84e-52 186
MsaG040218 AT4G32980.2 39.700 267 142 5 172 437 202 450 7.84e-52 186
MsaG040218 AT2G27990.1 38.081 344 158 12 106 430 189 496 2.81e-51 187
MsaG040218 AT1G75430.2 34.177 237 107 5 172 384 17 228 3.59e-32 126
MsaG040218 AT2G27990.2 31.879 298 148 12 106 384 189 450 5.66e-25 108

Find 173 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGAGTTCAAAGTATTTA+AGG 0.159295 7:+97919725 MsaT040218.1:CDS
TTAACATCAATGAAACTATT+AGG 0.199947 7:-97922986 None:intergenic
ATCTTTCAGGCAATCCTCTT+TGG 0.211678 7:-97922106 None:intergenic
TCTTTCAGGCAATCCTCTTT+GGG 0.217697 7:-97922105 None:intergenic
TATTGGAGTTTCATGGCTTT+TGG 0.219698 7:-97922819 None:intergenic
ACAAACTTCATTGGTGGATT+TGG 0.220206 7:+97923097 MsaT040218.1:CDS
AACTGTGCAGCAAACCTCTT+TGG 0.253744 7:-97923352 None:intergenic
TAAAGCTACAAATAAGAGTT+TGG 0.254411 7:+97921962 MsaT040218.1:CDS
TTCTTCCTAGTTGAATGTTT+TGG 0.269559 7:-97923249 None:intergenic
AATTCAGGATTCAGCTTCAT+TGG 0.282072 7:+97922893 MsaT040218.1:CDS
GAGGAACTATCAATGAAATT+TGG 0.286124 7:+97923028 MsaT040218.1:CDS
GGTCTAGAAACAGAAATTAT+TGG 0.288557 7:-97922836 None:intergenic
ATGAAGGAAAATGAACTAAA+TGG 0.289721 7:+97922677 MsaT040218.1:CDS
GTATCACGCGCCGCCGTGTT+TGG 0.299903 7:-97919568 None:intergenic
CGCCGCCGCCACCACTTGAT+TGG 0.300629 7:-97919246 None:intergenic
AATTGCAACAGGTTTCAAAT+TGG 0.308221 7:+97922594 MsaT040218.1:intron
GGAAATGTTAGAAACAATTC+AGG 0.311379 7:+97922878 MsaT040218.1:CDS
GGTTCGCCGTCTCCGGCTTC+TGG 0.313206 7:+97919661 MsaT040218.1:CDS
GGAGGAGATGGATCAATAAT+TGG 0.316947 7:+97919865 MsaT040218.1:CDS
CTGTTTCTGTTCTTCGTGCT+TGG 0.318849 7:+97922129 MsaT040218.1:CDS
CAATACCCAATTGGTGATAT+TGG 0.320766 7:+97923121 MsaT040218.1:CDS
CAAAACAAACAGGGCTTACT+AGG 0.321411 7:+97922481 MsaT040218.1:CDS
TAACATCAATGAAACTATTA+GGG 0.331113 7:-97922985 None:intergenic
CAGAAATTATTGGAGTTTCA+TGG 0.342483 7:-97922826 None:intergenic
ACAACGTGCTCTACAACAAT+TGG 0.343052 7:+97922055 MsaT040218.1:CDS
ATCCACCAATGAAGTTTGTT+TGG 0.345852 7:-97923093 None:intergenic
GAATAATAACAATGGGAATC+CGG 0.361123 7:+97919693 MsaT040218.1:CDS
TAGGGTTATGCATAAGTTCA+TGG 0.365082 7:-97922967 None:intergenic
ATTATTTAGGACACAAAATC+TGG 0.366418 7:-97923379 None:intergenic
ATAAGTGAACCAAATGAGTT+TGG 0.373207 7:+97923280 MsaT040218.1:CDS
CACATGCTTGCAAAACAAAC+AGG 0.376982 7:+97922471 MsaT040218.1:CDS
CGTCATGGTGCGCGTGGATT+TGG 0.380286 7:-97919483 None:intergenic
GGTGAAGAGGATTGCTTTGG+AGG 0.380432 7:+97921984 MsaT040218.1:CDS
TGTCCTAGCTGAACCGATTC+CGG 0.381221 7:-97921868 None:intergenic
TTGGGTGAAGAGGATTGCTT+TGG 0.382173 7:+97921981 MsaT040218.1:CDS
TTTATAGAACCAAACTCATT+TGG 0.385263 7:-97923289 None:intergenic
TGTGAATAGTGGTGTTGAAT+TGG 0.390097 7:+97919780 MsaT040218.1:CDS
AACCTACCAATATCACCAAT+TGG 0.390271 7:-97923127 None:intergenic
ATTGGATCATCAGAACTAGA+AGG 0.393321 7:+97922911 MsaT040218.1:CDS
AAAGCTACAAATAAGAGTTT+GGG 0.393739 7:+97921963 MsaT040218.1:CDS
TGTGTGGAATTGTAACCTTT+AGG 0.394460 7:-97922788 None:intergenic
GAGGTAAAATTGAAGGTTCA+AGG 0.397374 7:+97922003 MsaT040218.1:CDS
ACTGTGCAGCAAACCTCTTT+GGG 0.397435 7:-97923351 None:intergenic
TATCACGCGCCGCCGTGTTT+GGG 0.400157 7:-97919567 None:intergenic
TGGTGTTGTTGGTGGTTAAG+AGG 0.400409 7:-97919463 None:intergenic
TGCATAAGTTCATGGTTCCT+TGG 0.400560 7:-97922959 None:intergenic
GCAAGATTCGTTTCTATGTC+TGG 0.404625 7:+97919637 MsaT040218.1:CDS
GACATAGAAACGAATCTTGC+CGG 0.407425 7:-97919634 None:intergenic
TAAATGCTCGAGTCAGGCTT+TGG 0.408513 7:+97922621 MsaT040218.1:CDS
GCGCGTGGATTTGGTGTTGT+TGG 0.411629 7:-97919474 None:intergenic
TCTGAGTTCAAAGTATTTAA+GGG 0.411868 7:+97919726 MsaT040218.1:CDS
GTTGAGGAAAACATAGTTAC+CGG 0.412150 7:-97919368 None:intergenic
GGAATGAGCAAGGTGAATAT+TGG 0.415474 7:+97919820 MsaT040218.1:CDS
GGAAACCAAACAAACTTCAT+TGG 0.423223 7:+97923088 MsaT040218.1:CDS
GGTTTATAAATGCTCGAGTC+AGG 0.425092 7:+97922615 MsaT040218.1:CDS
GGGGTCTCCAAGCGTTATGC+TGG 0.431536 7:-97922085 None:intergenic
AGAACAGAAACAGATCTTTC+AGG 0.435978 7:-97922119 None:intergenic
CTTGGTCTTGATTCAATACA+AGG 0.436754 7:+97923202 MsaT040218.1:CDS
AATAATAACAATGGGAATCC+GGG 0.437333 7:+97919694 MsaT040218.1:CDS
TCAATAATTGGTGGTGGGGA+GGG 0.443667 7:+97919877 MsaT040218.1:CDS
GTGAATATTGGAGAATCATC+AGG 0.448018 7:+97919832 MsaT040218.1:CDS
TTCGAACAAGCCGCCGGAAT+CGG 0.449398 7:+97921855 MsaT040218.1:CDS
ATTGGTGGTGGGGAGGGAAG+TGG 0.452026 7:+97919883 MsaT040218.1:CDS
ATCAATAATTGGTGGTGGGG+AGG 0.457926 7:+97919876 MsaT040218.1:CDS
AAACAATCTCAAAGCAGTTT+CGG 0.458580 7:+97921910 MsaT040218.1:CDS
TGCTTTGGAGGTAAAATTGA+AGG 0.465481 7:+97921996 MsaT040218.1:CDS
AAACCACAACCTCCATTTGA+TGG 0.467737 7:-97921827 None:intergenic
GTCTGGTGGTTCGCCGTCTC+CGG 0.468228 7:+97919654 MsaT040218.1:CDS
GTGAATAGTGGTGTTGAATT+GGG 0.472967 7:+97919781 MsaT040218.1:CDS
TGTTTGAAAGATGCAATAAC+AGG 0.474143 7:+97921933 MsaT040218.1:CDS
CCACAATCATCACCACTTGT+TGG 0.474765 7:+97922857 MsaT040218.1:CDS
ATGTTGATACTTTCATATTG+AGG 0.481269 7:-97923322 None:intergenic
CACACATGCAGTACAATCAA+TGG 0.483257 7:+97919533 MsaT040218.1:CDS
ATGTGCTTGTCTGAATCCTT+TGG 0.484894 7:-97922453 None:intergenic
AATAATGTTTCACTCACTCT+TGG 0.485275 7:+97923184 MsaT040218.1:CDS
CAACCTTCTCATGCCGCTGC+CGG 0.488739 7:+97919349 MsaT040218.1:CDS
TCAGAATATTGTATATAGCC+TGG 0.489333 7:-97919301 None:intergenic
TTACAACGAATAATAACAAT+GGG 0.489888 7:+97919686 MsaT040218.1:CDS
GACGTTGTACCTTCTTTGCA+TGG 0.491466 7:+97919502 MsaT040218.1:CDS
AGTGGTGGCGGCGGCGCCGA+CGG 0.491733 7:+97919253 MsaT040218.1:CDS
CCATGATAGTACGTTGCCAT+TGG 0.498403 7:-97919208 None:intergenic
CCACCATCAAATGGAGGTTG+TGG 0.501135 7:+97921824 MsaT040218.1:CDS
ACCTACCAATATCACCAATT+GGG 0.505940 7:-97923126 None:intergenic
CAGACAGTACCACCATCAAA+TGG 0.506484 7:+97921815 MsaT040218.1:CDS
AACAGGGCTTACTAGGAGTC+AGG 0.508298 7:+97922488 MsaT040218.1:CDS
AACCAAACAAACTTCATTGG+TGG 0.508445 7:+97923091 MsaT040218.1:CDS
ACCTTTAGGTTCTGTTTCAG+AGG 0.511607 7:-97922774 None:intergenic
ACGTACATTTCTTCCACCAT+TGG 0.511797 7:-97922647 None:intergenic
TTTCTAACATTTCCAACAAG+TGG 0.513849 7:-97922869 None:intergenic
ATCCAATCAAGTGGTGGCGG+CGG 0.518066 7:+97919244 MsaT040218.1:CDS
GAACTCAGAATCTGAATCCC+CGG 0.518621 7:-97919712 None:intergenic
CAACGTGCTCTACAACAATT+GGG 0.519313 7:+97922056 MsaT040218.1:CDS
CTTTCAGGCAATCCTCTTTG+GGG 0.520504 7:-97922104 None:intergenic
AAATAAGAGTTTGGGTGAAG+AGG 0.522513 7:+97921971 MsaT040218.1:CDS
GATGGATCAATAATTGGTGG+TGG 0.523887 7:+97919871 MsaT040218.1:CDS
AATGTACGTGGAAGAAATGA+AGG 0.525935 7:+97922661 MsaT040218.1:CDS
CGTGGATTTGGTGTTGTTGG+TGG 0.528203 7:-97919471 None:intergenic
GAATCATCAGGAGTTGGTAG+TGG 0.530198 7:+97919844 MsaT040218.1:CDS
AGGTGGCGCGTGAGGTGAGA+AGG 0.530811 7:-97919413 None:intergenic
GGAAGGAAGCCATGCAAAGA+AGG 0.533172 7:-97919511 None:intergenic
TTCGTTGTAACACCAGAAGC+CGG 0.536997 7:-97919673 None:intergenic
CCAATGGCAACGTACTATCA+TGG 0.542137 7:+97919208 None:intergenic
ACATTATTACTTGAAAACCT+TGG 0.542336 7:-97923169 None:intergenic
GGATTTGGACAATACCCAAT+TGG 0.542874 7:+97923112 MsaT040218.1:CDS
GGAGTTGGTAGTGGAGGAGA+TGG 0.547177 7:+97919853 MsaT040218.1:CDS
AAAAGTGTACTTACGGGTGG+AGG 0.547866 7:-97922166 None:intergenic
ACACTTGTTCTCATGAATCC+AGG 0.550346 7:+97919283 MsaT040218.1:CDS
TCCTCGTTCGAACAAGCCGC+CGG 0.551758 7:+97921849 MsaT040218.1:CDS
ACCCAATTGGTGATATTGGT+AGG 0.552228 7:+97923125 MsaT040218.1:CDS
GAATGATCCAGCATAACGCT+TGG 0.554984 7:+97922078 MsaT040218.1:CDS
TCCAACACTCAACAATTCGT+TGG 0.555631 7:+97919436 MsaT040218.1:CDS
ACCTCTGAAACAGAACCTAA+AGG 0.555839 7:+97922773 MsaT040218.1:CDS
TCTTAGTCTCTCTTCACAGC+CGG 0.560177 7:+97919615 MsaT040218.1:CDS
CATTGATTGTACTGCATGTG+TGG 0.560839 7:-97919532 None:intergenic
TTGAGATTGTTTGTAGTGCA+AGG 0.562020 7:-97921899 None:intergenic
CCGCCGGAATCGGTTCAGCT+AGG 0.562168 7:+97921865 MsaT040218.1:CDS
ATTGGAGAATCATCAGGAGT+TGG 0.562542 7:+97919838 MsaT040218.1:CDS
TTGGGAAAGAAGAGTGGTGG+TGG 0.562954 7:+97919799 MsaT040218.1:CDS
GAAAACATAGTTACCGGCAG+CGG 0.567137 7:-97919362 None:intergenic
TCATCAGGAGTTGGTAGTGG+AGG 0.567311 7:+97919847 MsaT040218.1:CDS
GTTACAACGAATAATAACAA+TGG 0.571166 7:+97919685 MsaT040218.1:CDS
GCCAACGAATTGTTGAGTGT+TGG 0.571349 7:-97919437 None:intergenic
ATGGATCAATAATTGGTGGT+GGG 0.575349 7:+97919872 MsaT040218.1:CDS
ATGAAATACCTCATCAAGCA+TGG 0.576005 7:-97919974 None:intergenic
TGAGATTGTTTGTAGTGCAA+GGG 0.576129 7:-97921898 None:intergenic
GCACAATGAGGCAAATAATG+AGG 0.576266 7:+97923009 MsaT040218.1:CDS
CCAAACCAAAACATTCAACT+AGG 0.579234 7:+97923244 MsaT040218.1:CDS
GAAATCCAATCAAGTGGTGG+CGG 0.581239 7:+97919241 MsaT040218.1:CDS
TTTCAGCAGCTGTAGAGTTG+AGG 0.581659 7:-97919384 None:intergenic
CATTGATGTTAAGCACAATG+AGG 0.585091 7:+97922997 MsaT040218.1:CDS
GTTGGTTGAAGGTGGAGCAA+AGG 0.585799 7:+97921790 MsaT040218.1:intron
GATGAGAGACAAAATAGAGA+TGG 0.586332 7:+97923052 MsaT040218.1:CDS
TTACCGGCAGCGGCATGAGA+AGG 0.586375 7:-97919352 None:intergenic
TCAACATGCAAAACCCAAAG+AGG 0.590340 7:+97923338 MsaT040218.1:CDS
AACAAGTGTTTGAAGTCCGT+CGG 0.592444 7:-97919269 None:intergenic
TTGGATCATCAGAACTAGAA+GGG 0.594241 7:+97922912 MsaT040218.1:CDS
AGTCAGGCTTTGGAAGCCAA+TGG 0.594390 7:+97922631 MsaT040218.1:CDS
GAGTGGTGGTGGAATGAGCA+AGG 0.594607 7:+97919810 MsaT040218.1:CDS
GCTAATTACCATGCTTGATG+AGG 0.595737 7:+97919966 MsaT040218.1:CDS
GTACAACGTCATGGTGCGCG+TGG 0.595803 7:-97919489 None:intergenic
GACAGTCCTTGTTGAGCGCG+TGG 0.597975 7:-97919592 None:intergenic
GATTGTACTGCATGTGTGGA+AGG 0.599960 7:-97919528 None:intergenic
CCAACAAGTGGTGATGATTG+TGG 0.604006 7:-97922857 None:intergenic
AAATGAACTAAATGGATCTG+AGG 0.605958 7:+97922685 MsaT040218.1:CDS
TGGATCAATAATTGGTGGTG+GGG 0.613381 7:+97919873 MsaT040218.1:CDS
GATACTTTCATATTGAGGAG+AGG 0.614077 7:-97923317 None:intergenic
AATTCTGAAATCCAATCAAG+TGG 0.614202 7:+97919235 MsaT040218.1:CDS
AGATTCGTTTCTATGTCTGG+TGG 0.614647 7:+97919640 MsaT040218.1:CDS
GAACACAATTGACCCAAACA+CGG 0.622706 7:+97919555 MsaT040218.1:CDS
AATTGTTGAGTGTTGGAAGG+TGG 0.623899 7:-97919430 None:intergenic
GCAAAGAAGGTACAACGTCA+TGG 0.625334 7:-97919498 None:intergenic
GATACACCACGCGCTCAACA+AGG 0.625868 7:+97919586 MsaT040218.1:CDS
CAGGCTTTGGAAGCCAATGG+TGG 0.629052 7:+97922634 MsaT040218.1:CDS
GAGGTTGTGAATGTGAATAG+TGG 0.635951 7:+97919769 MsaT040218.1:CDS
ACGAATTGTTGAGTGTTGGA+AGG 0.639184 7:-97919433 None:intergenic
GTAACACCAGAAGCCGGAGA+CGG 0.643060 7:-97919667 None:intergenic
GTGTTGGAAGGTGGCGCGTG+AGG 0.647584 7:-97919421 None:intergenic
ATAATAACAATGGGAATCCG+GGG 0.647699 7:+97919695 MsaT040218.1:CDS
CCACAACCTCCATTTGATGG+TGG 0.650106 7:-97921824 None:intergenic
TCCGGCGGCTTGTTCGAACG+AGG 0.652183 7:-97921850 None:intergenic
ACATGCTTGCAAAACAAACA+GGG 0.653038 7:+97922472 MsaT040218.1:CDS
ACTCAGAACAATTCACACCA+AGG 0.656664 7:+97923152 MsaT040218.1:CDS
TCTGAAATCCAATCAAGTGG+TGG 0.660822 7:+97919238 MsaT040218.1:CDS
GTTGAATTGGGAAAGAAGAG+TGG 0.679581 7:+97919793 MsaT040218.1:CDS
GGAGATGGATCAATAATTGG+TGG 0.682848 7:+97919868 MsaT040218.1:CDS
AACGCTTGGAGACCCCAAAG+AGG 0.685460 7:+97922092 MsaT040218.1:CDS
GAACTAGAAGGGATACCACA+AGG 0.698540 7:+97922923 MsaT040218.1:CDS
GAATTGGGAAAGAAGAGTGG+TGG 0.708823 7:+97919796 MsaT040218.1:CDS
ACAGTACCACCATCAAATGG+AGG 0.710282 7:+97921818 MsaT040218.1:CDS
CACAATTGACCCAAACACGG+CGG 0.712861 7:+97919558 MsaT040218.1:CDS
CCTAGCTGAACCGATTCCGG+CGG 0.726597 7:-97921865 None:intergenic
ATGGCAACGTACTATCATGG+TGG 0.734896 7:+97919211 MsaT040218.1:CDS
AATGGTGGAAGAAATGTACG+TGG 0.752334 7:+97922649 MsaT040218.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 97919211 97923396 97919211 ID=MsaG040218
Chr7 mRNA 97919211 97923396 97919211 ID=MsaT040218.1;Parent=MsaG040218
Chr7 exon 97919211 97919987 97919211 ID=MsaT040218.1.exon1;Parent=MsaT040218.1
Chr7 CDS 97919211 97919987 97919211 ID=cds.MsaT040218.1;Parent=MsaT040218.1
Chr7 exon 97921801 97922174 97921801 ID=MsaT040218.1.exon2;Parent=MsaT040218.1
Chr7 CDS 97921801 97922174 97921801 ID=cds.MsaT040218.1;Parent=MsaT040218.1
Chr7 exon 97922449 97922509 97922449 ID=MsaT040218.1.exon3;Parent=MsaT040218.1
Chr7 CDS 97922449 97922509 97922449 ID=cds.MsaT040218.1;Parent=MsaT040218.1
Chr7 exon 97922605 97923396 97922605 ID=MsaT040218.1.exon4;Parent=MsaT040218.1
Chr7 CDS 97922605 97923396 97922605 ID=cds.MsaT040218.1;Parent=MsaT040218.1
Gene Sequence

>MsaT040218.1

ATGGCAACGTACTATCATGGTGGTAATTCTGAAATCCAATCAAGTGGTGGCGGCGGCGCCGACGGACTTCAAACACTTGTTCTCATGAATCCAGGCTATATACAATATTCTGATGCTACACAGCAACAACAAGCTCAACAACCTTCTCATGCCGCTGCCGGTAACTATGTTTTCCTCAACTCTACAGCTGCTGAAAACAACTCCTTCTCACCTCACGCGCCACCTTCCAACACTCAACAATTCGTTGGCATACCTCTTAACCACCAACAACACCAAATCCACGCGCACCATGACGTTGTACCTTCTTTGCATGGCTTCCTTCCACACATGCAGTACAATCAATGGAACACAATTGACCCAAACACGGCGGCGCGTGATACACCACGCGCTCAACAAGGACTGTCTCTTAGTCTCTCTTCACAGCCGGCAAGATTCGTTTCTATGTCTGGTGGTTCGCCGTCTCCGGCTTCTGGTGTTACAACGAATAATAACAATGGGAATCCGGGGATTCAGATTCTGAGTTCAAAGTATTTAAGGGCAGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAATAGTGGTGTTGAATTGGGAAAGAAGAGTGGTGGTGGAATGAGCAAGGTGAATATTGGAGAATCATCAGGAGTTGGTAGTGGAGGAGATGGATCAATAATTGGTGGTGGGGAGGGAAGTGGAAAACGTAGCTCTGAGCTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCCTCGTTCGAACAAGCCGCCGGAATCGGTTCAGCTAGGACATACACTGCCCTTGCACTACAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAAATTAAAGCTACAAATAAGAGTTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATATGTTGATCATCAACTACGTCAACAACGTGCTCTACAACAATTGGGAATGATCCAGCATAACGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTCCACCCCTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTCGAGTCAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTGGAAGAAATGAAGGAAAATGAACTAAATGGATCTGAGGATAAACAAAGTAAGAGCAATGAAGATTCTTCAATGAAAATAACATCCTCTCAAGAAAAAGCTCTCACCTCTGAAACAGAACCTAAAGGTTACAATTCCACACAAGACATTTCCAAAAGCCATGAAACTCCAATAATTTCTGTTTCTAGACCACAATCATCACCACTTGTTGGAAATGTTAGAAACAATTCAGGATTCAGCTTCATTGGATCATCAGAACTAGAAGGGATACCACAAGGAAGTCCTAAAAAACCAAGGAACCATGAACTTATGCATAACCCTAATAGTTTCATTGATGTTAAGCACAATGAGGCAAATAATGAGGAACTATCAATGAAATTTGGTGATGAGAGACAAAATAGAGATGGTTACTCTTTTATGGGAAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCACACCAAGGTTTTCAAGTAATAATGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAAATCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGATATAAGTGAACCAAATGAGTTTGGTTCTATAAACACTTCCTCTCCTCAATATGAAAGTATCAACATGCAAAACCCAAAGAGGTTTGCTGCACAGTTGTTACCAGATTTTGTGTCCTAA
Protein sequence

>MsaT040218.1

MATYYHGGNSEIQSSGGGGADGLQTLVLMNPGYIQYSDATQQQQAQQPSHAAAGNYVFLNSTAAENNSFSPHAPPSNTQQFVGIPLNHQQHQIHAHHDVVPSLHGFLPHMQYNQWNTIDPNTAARDTPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSGGGMSKVNIGESSGVGSGGDGSIIGGGEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENELNGSEDKQSKSNEDSSMKITSSQEKALTSETEPKGYNSTQDISKSHETPIISVSRPQSSPLVGNVRNNSGFSFIGSSELEGIPQGSPKKPRNHELMHNPNSFIDVKHNEANNEELSMKFGDERQNRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFTPRFSSNNVSLTLGLDSIQGNHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLPDFVS*