AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG040482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040482 MtrunA17_Chr7g0270891 94.906 373 11 2 1 371 1 367 0.0 726
MsaG040482 MtrunA17_Chr1g0193801 63.265 392 91 17 1 362 1 369 9.96e-154 438
MsaG040482 MtrunA17_Chr1g0193371 50.282 354 147 7 1 345 1 334 1.88e-101 304
MsaG040482 MtrunA17_Chr4g0058631 78.146 151 32 1 1 151 1 150 2.54e-84 260
MsaG040482 MtrunA17_Chr7g0271241 77.707 157 33 1 1 157 1 155 1.37e-77 243
MsaG040482 MtrunA17_Chr1g0211161 56.481 216 84 1 3 218 4 209 7.63e-77 236
MsaG040482 MtrunA17_Chr3g0117091 76.056 142 33 1 1 141 1 142 1.52e-76 240
MsaG040482 MtrunA17_Chr2g0330041 71.429 133 38 0 1 133 1 133 5.04e-68 219
MsaG040482 MtrunA17_Chr8g0342521 75.610 123 30 0 1 123 1 123 3.70e-67 216
MsaG040482 MtrunA17_Chr8g0342541 74.797 123 31 0 1 123 1 123 1.89e-66 214
MsaG040482 MtrunA17_Chr2g0309911 70.769 130 37 1 1 130 1 129 1.25e-65 211
MsaG040482 MtrunA17_Chr4g0037141 51.934 181 80 1 1 181 1 174 5.03e-63 203
MsaG040482 MtrunA17_Chr3g0115821 65.909 132 45 0 1 132 1 132 1.63e-62 203
MsaG040482 MtrunA17_Chr4g0039971 50.505 198 89 2 1 194 2 194 2.00e-62 203
MsaG040482 MtrunA17_Chr8g0387421 72.034 118 33 0 1 118 1 118 6.04e-62 201
MsaG040482 MtrunA17_Chr8g0385321 66.667 132 44 0 1 132 1 132 6.77e-62 201
MsaG040482 MtrunA17_Chr8g0342481 75.214 117 28 1 1 116 1 117 1.51e-60 200
MsaG040482 MtrunA17_Chr3g0131121 64.885 131 46 0 1 131 1 131 1.92e-60 196
MsaG040482 MtrunA17_Chr6g0453471 67.188 128 42 0 1 128 1 128 3.07e-60 198
MsaG040482 MtrunA17_Chr5g0410961 41.034 290 128 9 1 282 1 255 4.49e-60 197
MsaG040482 MtrunA17_Chr7g0217741 65.909 132 45 0 1 132 1 132 4.57e-60 196
MsaG040482 MtrunA17_Chr4g0042671 67.188 128 42 0 1 128 1 128 9.34e-60 198
MsaG040482 MtrunA17_Chr5g0395281 70.833 120 35 0 12 131 12 131 1.25e-59 195
MsaG040482 MtrunA17_Chr5g0434571 60.690 145 57 0 1 145 37 181 4.44e-59 195
MsaG040482 MtrunA17_Chr5g0397231 73.636 110 29 0 1 110 1 110 1.01e-58 193
MsaG040482 MtrunA17_Chr7g0228891 45.833 216 114 2 1 213 1 216 1.37e-58 191
MsaG040482 MtrunA17_Chr3g0110351 66.923 130 43 0 1 130 1 130 1.53e-58 192
MsaG040482 MtrunA17_Chr3g0103281 59.091 154 60 1 1 154 1 151 2.44e-58 192
MsaG040482 MtrunA17_Chr2g0281071 65.891 129 43 1 1 128 1 129 2.68e-58 192
MsaG040482 MtrunA17_Chr2g0323411 67.188 128 42 0 1 128 1 128 6.02e-58 191
MsaG040482 MtrunA17_Chr1g0203411 54.598 174 71 2 1 168 1 172 8.04e-58 190
MsaG040482 MtrunA17_Chr4g0048511 65.116 129 44 1 1 128 1 129 1.10e-57 191
MsaG040482 MtrunA17_Chr5g0435101 63.200 125 46 0 3 127 2 126 1.22e-57 186
MsaG040482 MtrunA17_Chr6g0452271 62.121 132 50 0 1 132 1 132 1.47e-57 190
MsaG040482 MtrunA17_Chr8g0349261 66.667 132 42 2 1 130 1 132 2.53e-57 188
MsaG040482 MtrunA17_Chr4g0032401 74.107 112 29 0 11 122 16 127 2.55e-57 189
MsaG040482 MtrunA17_Chr4g0057031 63.359 131 48 0 1 131 1 131 3.93e-57 187
MsaG040482 MtrunA17_Chr2g0328771 76.415 106 25 0 12 117 20 125 5.55e-57 188
MsaG040482 MtrunA17_Chr3g0088461 76.147 109 26 0 9 117 19 127 2.92e-56 187
MsaG040482 MtrunA17_Chr7g0274581 56.000 150 55 1 1 150 1 139 1.34e-55 181
MsaG040482 MtrunA17_Chr7g0261281 66.949 118 39 0 1 118 1 118 2.69e-54 180
MsaG040482 MtrunA17_Chr4g0044421 62.698 126 47 0 1 126 1 126 2.84e-54 177
MsaG040482 MtrunA17_Chr1g0203441 69.748 119 35 1 9 127 10 127 2.67e-53 177
MsaG040482 MtrunA17_Chr1g0187761 67.797 118 38 0 1 118 1 118 3.58e-53 176
MsaG040482 MtrunA17_Chr6g0470971 70.339 118 34 1 9 125 11 128 1.77e-52 176
MsaG040482 MtrunA17_Chr3g0121241 62.903 124 46 0 6 129 36 159 5.72e-52 175
MsaG040482 MtrunA17_Chr1g0167661 65.517 116 40 0 1 116 1 116 1.93e-51 172
MsaG040482 MtrunA17_Chr1g0167691 64.655 116 41 0 1 116 1 116 8.85e-51 170
MsaG040482 MtrunA17_Chr5g0417821 63.025 119 44 0 12 130 7 125 2.60e-50 170
MsaG040482 MtrunA17_Chr2g0311221 66.055 109 37 0 2 110 4 112 1.49e-49 169
MsaG040482 MtrunA17_Chr2g0323351 63.793 116 42 0 1 116 1 116 1.50e-49 167
MsaG040482 MtrunA17_Chr4g0022931 54.074 135 62 0 5 139 6 140 2.82e-49 167
MsaG040482 MtrunA17_Chr4g0070611 61.538 117 45 0 1 117 1 117 4.08e-49 167
MsaG040482 MtrunA17_Chr8g0342511 80.460 87 17 0 1 87 1 87 4.95e-49 160
MsaG040482 MtrunA17_Chr8g0346561 62.712 118 44 0 1 118 1 118 8.92e-49 166
MsaG040482 MtrunA17_Chr4g0070641 61.538 117 45 0 1 117 1 117 1.11e-48 162
MsaG040482 MtrunA17_Chr8g0342531 77.528 89 20 0 1 89 1 89 2.00e-48 161
MsaG040482 MtrunA17_Chr1g0151941 54.412 136 58 3 1 135 1 133 3.25e-48 163
MsaG040482 MtrunA17_Chr4g0022901 63.964 111 40 0 5 115 6 116 7.79e-48 163
MsaG040482 MtrunA17_Chr4g0068061 62.931 116 43 0 1 116 1 116 8.40e-48 165
MsaG040482 MtrunA17_Chr7g0275911 61.538 117 45 0 1 117 1 117 8.97e-48 162
MsaG040482 MtrunA17_Chr1g0152011 47.727 176 79 2 1 175 1 164 1.14e-47 165
MsaG040482 MtrunA17_Chr1g0194951 62.931 116 43 0 1 116 1 116 6.26e-46 161
MsaG040482 MtrunA17_Chr4g0028311 57.812 128 53 1 1 127 1 128 6.71e-46 159
MsaG040482 MtrunA17_Chr4g0022911 58.621 116 47 1 1 115 1 116 8.44e-46 158
MsaG040482 MtrunA17_Chr5g0400821 40.826 218 106 3 1 217 1 196 1.12e-45 159
MsaG040482 MtrunA17_Chr7g0217221 57.627 118 50 0 1 118 1 118 3.20e-45 156
MsaG040482 MtrunA17_Chr3g0135311 59.167 120 48 1 1 119 1 120 3.60e-45 158
MsaG040482 MtrunA17_Chr8g0342461 75.556 90 21 1 1 89 1 90 9.04e-45 150
MsaG040482 MtrunA17_Chr4g0060721 44.444 171 86 2 1 165 2 169 2.17e-44 156
MsaG040482 MtrunA17_Chr8g0342471 74.444 90 22 1 1 89 1 90 3.05e-44 149
MsaG040482 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 9.05e-44 154
MsaG040482 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 2.47e-43 152
MsaG040482 MtrunA17_Chr4g0022881 55.556 135 50 2 9 136 9 140 2.73e-43 150
MsaG040482 MtrunA17_Chr7g0254411 55.200 125 54 1 1 123 1 125 4.27e-43 152
MsaG040482 MtrunA17_Chr7g0264641 57.265 117 49 1 1 116 1 117 8.57e-43 150
MsaG040482 MtrunA17_Chr3g0092401 56.780 118 51 0 1 118 2 119 9.08e-43 151
MsaG040482 MtrunA17_Chr7g0269831 56.835 139 59 1 1 138 1 139 2.30e-42 151
MsaG040482 MtrunA17_Chr7g0247131 68.539 89 28 0 44 132 10 98 3.86e-42 148
MsaG040482 MtrunA17_Chr7g0228231 55.833 120 51 1 1 118 1 120 6.68e-42 145
MsaG040482 MtrunA17_Chr4g0022891 53.030 132 58 1 9 136 9 140 7.64e-42 146
MsaG040482 MtrunA17_Chr3g0099131 59.813 107 43 0 12 118 41 147 9.52e-42 153
MsaG040482 MtrunA17_Chr1g0209661 52.033 123 59 0 11 133 26 148 2.51e-41 147
MsaG040482 MtrunA17_Chr6g0487491 56.452 124 45 2 1 115 1 124 2.52e-41 145
MsaG040482 MtrunA17_Chr6g0450101 58.333 108 45 0 11 118 13 120 2.64e-41 144
MsaG040482 MtrunA17_Chr1g0154031 62.264 106 40 0 12 117 76 181 3.42e-41 149
MsaG040482 MtrunA17_Chr8g0354661 61.321 106 41 0 12 117 37 142 3.48e-41 152
MsaG040482 MtrunA17_Chr4g0055981 61.682 107 41 0 9 115 52 158 4.66e-41 144
MsaG040482 MtrunA17_Chr6g0453211 57.273 110 47 0 1 110 1 110 4.94e-41 146
MsaG040482 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 7.95e-41 147
MsaG040482 MtrunA17_Chr1g0186061 57.658 111 47 0 5 115 13 123 4.21e-40 142
MsaG040482 MtrunA17_Chr8g0343831 57.273 110 47 0 10 119 6 115 6.25e-40 142
MsaG040482 MtrunA17_Chr3g0080861 57.547 106 45 0 12 117 37 142 6.80e-40 148
MsaG040482 MtrunA17_Chr1g0168661 55.263 114 51 0 4 117 13 126 8.66e-40 142
MsaG040482 MtrunA17_Chr1g0180391 54.400 125 50 2 12 135 19 137 2.94e-39 139
MsaG040482 MtrunA17_Chr1g0194301 54.955 111 50 0 12 122 33 143 1.17e-38 139
MsaG040482 MtrunA17_Chr5g0434831 59.048 105 43 0 12 116 7 111 1.32e-38 136
MsaG040482 MtrunA17_Chr1g0194291 53.719 121 55 1 12 132 21 140 4.45e-38 137
MsaG040482 MtrunA17_Chr5g0434931 53.636 110 51 0 12 121 35 144 8.08e-38 137
MsaG040482 MtrunA17_Chr5g0434911 54.545 110 50 0 7 116 16 125 9.27e-38 137
MsaG040482 MtrunA17_Chr7g0240821 60.000 100 40 0 17 116 6 105 1.27e-37 135
MsaG040482 MtrunA17_Chr4g0042611 62.500 88 33 0 1 88 1 88 1.81e-37 130
MsaG040482 MtrunA17_Chr2g0322521 59.434 106 43 0 12 117 29 134 1.45e-36 136
MsaG040482 MtrunA17_Chr2g0327821 52.252 111 53 0 9 119 3 113 4.53e-36 131
MsaG040482 MtrunA17_Chr7g0220341 54.545 110 48 1 12 119 25 134 4.99e-36 132
MsaG040482 MtrunA17_Chr5g0434841 56.190 105 46 0 12 116 20 124 5.93e-36 133
MsaG040482 MtrunA17_Chr8g0360111 57.426 101 43 0 12 112 25 125 1.07e-35 131
MsaG040482 MtrunA17_Chr7g0228991 54.206 107 49 0 10 116 27 133 1.98e-35 130
MsaG040482 MtrunA17_Chr1g0192411 43.333 180 94 5 11 186 11 186 2.68e-35 133
MsaG040482 MtrunA17_Chr5g0440781 44.595 148 71 4 13 159 13 150 4.92e-35 127
MsaG040482 MtrunA17_Chr8g0334881 54.545 110 49 1 9 117 7 116 5.43e-35 130
MsaG040482 MtrunA17_Chr4g0030881 52.632 114 47 1 13 119 8 121 1.28e-34 128
MsaG040482 MtrunA17_Chr5g0441141 44.595 148 71 4 13 159 13 150 1.78e-34 128
MsaG040482 MtrunA17_Chr2g0294811 60.227 88 35 0 1 88 1 88 1.98e-34 123
MsaG040482 MtrunA17_Chr5g0440761 44.595 148 71 4 13 159 13 150 2.17e-34 127
MsaG040482 MtrunA17_Chr2g0293911 55.856 111 49 0 12 122 24 134 5.96e-34 128
MsaG040482 MtrunA17_Chr4g0068921 54.955 111 50 0 12 122 24 134 1.60e-33 123
MsaG040482 MtrunA17_Chr4g0013361 55.140 107 47 1 12 117 10 116 4.13e-33 125
MsaG040482 MtrunA17_Chr5g0395221 67.500 80 26 0 9 88 9 88 5.36e-33 118
MsaG040482 MtrunA17_Chr2g0323321 60.465 86 34 0 7 92 6 91 6.25e-32 116
MsaG040482 MtrunA17_Chr5g0441131 49.558 113 55 2 13 124 10 121 1.66e-31 117
MsaG040482 MtrunA17_Chr3g0099141 56.627 83 36 0 12 94 40 122 9.38e-31 114
MsaG040482 MtrunA17_Chr3g0093811 58.427 89 37 0 44 132 14 102 1.99e-30 117
MsaG040482 MtrunA17_Chr4g0053431 53.922 102 46 1 14 115 5 105 1.49e-28 112
MsaG040482 MtrunA17_Chr7g0238631 39.791 191 103 5 11 196 110 293 2.69e-28 115
MsaG040482 MtrunA17_Chr4g0008551 48.673 113 53 2 14 126 38 145 3.11e-28 113
MsaG040482 MtrunA17_Chr5g0401731 49.138 116 58 1 14 129 15 129 2.18e-27 110
MsaG040482 MtrunA17_Chr5g0429661 44.231 104 57 1 12 115 120 222 5.92e-27 109
MsaG040482 MtrunA17_Chr6g0454921 39.053 169 102 1 14 182 15 182 1.56e-26 105
MsaG040482 MtrunA17_Chr3g0139671 48.113 106 54 1 11 116 82 186 1.01e-25 108
MsaG040482 MtrunA17_Chr6g0480581 43.396 106 59 1 14 119 4 108 7.45e-25 101
MsaG040482 MtrunA17_Chr7g0229101 60.000 70 28 0 44 113 4 73 8.28e-25 100
MsaG040482 MtrunA17_Chr6g0453751 53.763 93 34 2 12 95 20 112 1.49e-24 97.4
MsaG040482 MtrunA17_Chr5g0434901 60.294 68 27 0 46 113 7 74 2.45e-24 96.7
MsaG040482 MtrunA17_Chr1g0157731 47.170 106 55 1 11 116 88 192 2.79e-24 104
MsaG040482 MtrunA17_Chr7g0229131 56.164 73 32 0 44 116 4 76 3.53e-24 97.8
MsaG040482 MtrunA17_Chr4g0058991 41.964 112 62 2 9 119 204 313 5.70e-24 102
MsaG040482 MtrunA17_Chr3g0117511 42.593 108 60 2 14 120 183 289 7.33e-24 102
MsaG040482 MtrunA17_Chr4g0042501 42.453 106 60 1 14 119 105 209 8.62e-24 101
MsaG040482 MtrunA17_Chr5g0417621 41.284 109 63 1 11 119 131 238 9.38e-24 102
MsaG040482 MtrunA17_Chr3g0133601 48.039 102 52 1 14 115 37 137 1.09e-23 97.8
MsaG040482 MtrunA17_Chr6g0460661 41.509 106 59 2 14 118 16 119 5.58e-23 94.4
MsaG040482 MtrunA17_Chr7g0228401 30.435 184 116 4 25 200 290 469 1.13e-22 99.4
MsaG040482 MtrunA17_Chr5g0437321 48.485 99 50 1 14 112 19 116 1.34e-22 96.3
MsaG040482 MtrunA17_Chr3g0125801 44.860 107 56 2 14 119 16 120 1.54e-22 96.3
MsaG040482 MtrunA17_Chr7g0228531 42.991 107 56 3 14 120 220 321 3.78e-22 97.1
MsaG040482 MtrunA17_Chr1g0177901 32.065 184 106 5 33 208 13 185 4.00e-22 93.2
MsaG040482 MtrunA17_Chr5g0425591 48.810 84 42 1 13 95 10 93 4.43e-22 89.7
MsaG040482 MtrunA17_Chr6g0460671 41.905 105 60 1 14 118 99 202 4.82e-22 95.9
MsaG040482 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 1.83e-21 95.5
MsaG040482 MtrunA17_Chr7g0254261 34.437 151 97 2 8 158 83 231 1.23e-20 92.0
MsaG040482 MtrunA17_Chr7g0228481 39.091 110 62 3 14 120 220 327 3.60e-20 91.3
MsaG040482 MtrunA17_Chr7g0238651 37.069 116 65 2 17 124 10 125 2.22e-19 88.6
MsaG040482 MtrunA17_Chr7g0233061 39.623 106 60 4 14 119 180 281 1.53e-17 83.2
MsaG040482 MtrunA17_Chr5g0416341 35.238 105 67 1 17 121 29 132 6.90e-17 82.0
MsaG040482 MtrunA17_Chr5g0395231 44.118 102 52 2 78 179 5 101 3.51e-16 77.4
MsaG040482 MtrunA17_Chr1g0193901 50.562 89 42 2 10 96 9 97 8.93e-16 72.8
MsaG040482 MtrunA17_Chr1g0193891 50.562 89 42 2 10 96 9 97 8.93e-16 72.8
MsaG040482 MtrunA17_Chr1g0193871 50.562 89 42 2 10 96 9 97 8.93e-16 72.8
MsaG040482 MtrunA17_Chr1g0193881 50.562 89 42 2 10 96 9 97 8.93e-16 72.8
MsaG040482 MtrunA17_Chr8g0362231 34.211 114 73 2 17 130 25 136 2.09e-15 77.4
MsaG040482 MtrunA17_Chr4g0042621 69.565 46 13 1 84 128 9 54 1.19e-12 68.2
MsaG040482 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 2.04e-12 62.0
MsaG040482 MtrunA17_Chr3g0104491 37.931 87 47 3 53 132 1 87 2.91e-12 66.6
MsaG040482 MtrunA17_Chr3g0145551 65.000 40 14 0 92 131 2 41 7.81e-12 60.8
MsaG040482 MtrunA17_Chr7g0233151 27.673 159 92 6 65 207 1 152 6.72e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040482 AT4G01680.3 81.290 155 29 0 1 155 1 155 1.11e-91 275
MsaG040482 AT4G01680.1 81.290 155 29 0 1 155 1 155 5.37e-91 277
MsaG040482 AT4G01680.2 75.449 167 29 1 1 155 1 167 1.47e-87 268
MsaG040482 AT1G09540.1 80.537 149 29 0 1 149 1 149 5.22e-87 268
MsaG040482 AT1G57560.1 88.636 132 15 0 1 132 1 132 1.31e-86 265
MsaG040482 AT1G57560.2 87.970 133 16 0 1 133 1 133 8.14e-86 261
MsaG040482 AT5G26660.1 79.730 148 28 1 1 146 1 148 3.53e-85 262
MsaG040482 AT3G13890.2 80.172 116 23 0 1 116 1 116 2.61e-67 216
MsaG040482 AT3G12720.1 71.429 126 35 1 1 126 12 136 9.09e-66 211
MsaG040482 AT3G02940.2 67.407 135 44 0 1 135 1 135 3.84e-65 209
MsaG040482 AT3G02940.1 67.407 135 44 0 1 135 1 135 1.11e-64 209
MsaG040482 AT3G02940.3 67.407 135 44 0 1 135 1 135 1.11e-64 209
MsaG040482 AT3G13890.1 74.400 125 23 1 1 116 1 125 3.81e-64 209
MsaG040482 AT5G16770.4 66.667 135 45 0 1 135 1 135 4.91e-64 207
MsaG040482 AT5G16770.3 66.667 135 45 0 1 135 1 135 4.91e-64 207
MsaG040482 AT5G16770.1 66.667 135 45 0 1 135 1 135 1.17e-63 206
MsaG040482 AT5G16770.2 66.667 135 45 0 1 135 1 135 1.17e-63 206
MsaG040482 AT4G34990.1 58.278 151 63 0 1 151 1 151 1.50e-62 202
MsaG040482 AT1G63910.1 68.750 128 40 0 1 128 1 128 1.74e-62 204
MsaG040482 AT3G61250.1 68.217 129 41 0 1 129 1 129 2.00e-62 202
MsaG040482 AT1G66230.1 67.391 138 45 0 1 138 1 138 1.14e-61 199
MsaG040482 AT2G16720.1 56.410 156 68 0 1 156 1 156 3.01e-61 198
MsaG040482 AT4G21440.1 38.941 321 144 8 1 290 1 300 3.34e-61 201
MsaG040482 AT5G15310.1 65.909 132 45 0 1 132 1 132 3.49e-60 197
MsaG040482 AT1G34670.1 65.152 132 46 0 1 132 1 132 3.84e-60 198
MsaG040482 AT4G12350.1 52.632 171 81 0 1 171 1 171 3.86e-60 196
MsaG040482 AT5G16600.1 63.194 144 53 0 1 144 1 144 4.03e-60 197
MsaG040482 AT5G15310.2 65.909 132 45 0 1 132 1 132 4.38e-60 196
MsaG040482 AT5G15310.4 65.909 132 45 0 1 132 1 132 6.40e-60 194
MsaG040482 AT4G38620.1 64.122 131 47 0 1 131 1 131 6.40e-60 195
MsaG040482 AT4G05100.1 65.891 129 43 1 1 128 1 129 1.56e-59 195
MsaG040482 AT3G01140.2 65.909 132 45 0 1 132 1 132 2.07e-59 196
MsaG040482 AT5G10280.1 63.636 132 48 0 1 132 1 132 2.74e-59 195
MsaG040482 AT1G22640.1 63.359 131 48 0 1 131 1 131 5.42e-59 192
MsaG040482 AT5G56110.1 65.152 132 46 0 1 132 1 132 6.57e-59 194
MsaG040482 AT4G28110.1 64.844 128 45 0 1 128 1 128 6.78e-59 192
MsaG040482 AT4G22680.1 63.504 137 49 1 1 136 1 137 8.98e-59 192
MsaG040482 AT4G09460.1 60.145 138 55 0 1 138 1 138 9.26e-59 191
MsaG040482 AT5G65230.1 64.885 131 46 0 1 131 1 131 1.49e-58 192
MsaG040482 AT5G07690.1 60.000 140 56 0 1 140 1 140 3.88e-57 189
MsaG040482 AT5G60890.1 59.690 129 52 0 1 129 1 129 1.18e-56 187
MsaG040482 AT3G01140.1 66.142 127 43 0 6 132 49 175 1.40e-56 189
MsaG040482 AT5G61420.2 59.712 139 54 1 1 137 1 139 1.86e-56 189
MsaG040482 AT4G17785.1 63.566 129 46 1 1 128 1 129 1.19e-55 186
MsaG040482 AT4G17785.2 63.566 129 46 1 1 128 1 129 1.19e-55 186
MsaG040482 AT5G14340.1 51.412 177 79 3 1 176 13 183 1.20e-55 184
MsaG040482 AT5G12870.1 73.394 109 29 0 10 118 16 124 1.64e-55 184
MsaG040482 AT1G35515.1 60.305 131 52 0 1 131 1 131 1.72e-55 181
MsaG040482 AT2G31180.1 45.685 197 107 0 1 197 1 197 6.87e-55 181
MsaG040482 AT3G13540.1 57.746 142 59 1 6 147 17 157 1.25e-54 180
MsaG040482 AT1G74430.1 62.500 128 48 0 1 128 1 128 2.51e-54 180
MsaG040482 AT3G08500.1 70.085 117 32 1 4 117 19 135 2.87e-54 182
MsaG040482 AT1G18570.1 51.829 164 66 2 1 163 1 152 4.25e-54 182
MsaG040482 AT5G54230.1 63.281 128 47 0 1 128 1 128 8.19e-54 181
MsaG040482 AT3G23250.1 46.829 205 83 4 1 192 1 192 8.77e-54 179
MsaG040482 AT3G28470.1 62.879 132 49 0 1 132 1 132 1.41e-53 180
MsaG040482 AT1G74080.1 51.266 158 75 1 1 158 1 156 2.99e-53 179
MsaG040482 AT5G07700.1 59.231 130 53 0 1 130 1 130 3.49e-53 179
MsaG040482 AT5G07700.2 59.231 130 53 0 1 130 1 130 3.49e-53 179
MsaG040482 AT1G79180.1 67.521 117 38 0 2 118 4 120 7.94e-53 177
MsaG040482 AT5G26660.2 73.394 109 27 1 40 146 9 117 4.82e-52 176
MsaG040482 AT5G62320.1 57.241 145 54 2 2 139 3 146 8.28e-52 173
MsaG040482 AT1G06180.1 65.254 118 41 0 1 118 1 118 1.64e-51 172
MsaG040482 AT3G48920.1 68.468 111 35 0 9 119 15 125 1.77e-51 172
MsaG040482 AT1G16490.1 66.087 115 39 0 2 116 4 118 1.38e-50 171
MsaG040482 AT1G18710.1 57.364 129 55 0 1 129 1 129 7.09e-50 169
MsaG040482 AT1G56160.1 65.217 115 40 0 2 116 4 118 9.63e-50 169
MsaG040482 AT4G25560.1 70.370 108 32 0 8 115 6 113 3.45e-48 165
MsaG040482 AT2G47460.1 59.091 132 54 0 1 132 1 132 7.56e-48 166
MsaG040482 AT5G23000.1 62.393 117 43 1 1 116 1 117 1.54e-47 164
MsaG040482 AT5G57620.1 60.800 125 46 2 1 122 1 125 4.39e-47 163
MsaG040482 AT5G49330.1 63.793 116 42 0 1 116 1 116 5.08e-47 163
MsaG040482 AT3G62610.1 62.931 116 43 0 1 116 1 116 5.20e-47 163
MsaG040482 AT5G52260.1 71.028 107 31 0 9 115 9 115 1.59e-46 160
MsaG040482 AT3G12820.1 61.538 117 45 0 3 119 5 121 2.65e-46 158
MsaG040482 AT3G49690.1 61.667 120 45 1 1 119 1 120 5.69e-46 160
MsaG040482 AT5G65790.1 60.833 120 46 1 1 119 1 120 6.75e-46 161
MsaG040482 AT1G79180.2 52.667 150 38 1 2 118 4 153 7.82e-46 160
MsaG040482 AT3G47600.1 57.627 118 50 0 1 118 1 118 8.62e-45 157
MsaG040482 AT1G74650.1 60.345 116 46 0 1 116 1 116 1.00e-44 157
MsaG040482 AT5G06100.1 46.951 164 84 2 10 173 30 190 2.89e-44 159
MsaG040482 AT5G62470.2 57.627 118 50 0 1 118 1 118 3.77e-44 156
MsaG040482 AT2G36890.1 55.906 127 55 1 1 126 1 127 6.19e-44 154
MsaG040482 AT5G35550.1 40.083 242 126 7 9 241 11 242 6.51e-44 153
MsaG040482 AT1G08810.1 45.349 172 77 1 1 172 1 155 7.18e-44 153
MsaG040482 AT2G36890.2 55.906 127 55 1 1 126 42 168 9.03e-44 155
MsaG040482 AT5G06100.5 46.951 164 84 2 10 173 30 190 1.17e-43 158
MsaG040482 AT5G06100.2 46.951 164 84 2 10 173 30 190 1.17e-43 158
MsaG040482 AT5G06100.3 46.951 164 84 2 10 173 30 190 1.17e-43 158
MsaG040482 AT5G06100.4 46.951 164 84 2 10 173 30 190 1.17e-43 158
MsaG040482 AT4G37780.1 58.333 120 49 1 1 119 1 120 2.67e-43 152
MsaG040482 AT5G14750.1 58.654 104 43 0 13 116 17 120 4.26e-43 149
MsaG040482 AT5G62470.1 57.627 118 49 1 1 118 1 117 2.45e-42 151
MsaG040482 AT3G01530.1 58.491 106 44 0 12 117 25 130 2.95e-42 147
MsaG040482 AT3G27810.1 55.856 111 49 0 11 121 19 129 3.95e-42 147
MsaG040482 AT5G40330.1 57.692 104 44 0 13 116 13 116 4.60e-42 147
MsaG040482 AT3G28910.1 56.897 116 50 0 1 116 1 116 1.10e-41 149
MsaG040482 AT3G27920.1 55.140 107 48 0 10 116 12 118 2.00e-41 145
MsaG040482 AT2G26960.1 42.775 173 85 3 9 168 17 188 2.75e-41 150
MsaG040482 AT4G26930.1 61.682 107 41 0 12 118 19 125 2.91e-41 149
MsaG040482 AT5G40350.1 56.364 110 48 0 11 120 16 125 5.30e-41 144
MsaG040482 AT5G52600.1 49.254 134 59 1 9 133 9 142 6.76e-41 143
MsaG040482 AT3G11440.2 51.880 133 61 2 12 144 41 170 7.73e-41 150
MsaG040482 AT5G55020.1 60.748 107 42 0 12 118 26 132 8.51e-41 150
MsaG040482 AT3G11440.3 50.735 136 64 2 9 144 38 170 2.28e-40 150
MsaG040482 AT3G11440.4 50.735 136 64 2 9 144 38 170 2.28e-40 150
MsaG040482 AT3G11440.1 50.735 136 64 2 9 144 38 170 2.28e-40 150
MsaG040482 AT1G25340.1 54.167 120 55 0 13 132 19 138 1.38e-39 142
MsaG040482 AT2G32460.1 49.618 131 65 1 10 140 16 145 1.66e-39 147
MsaG040482 AT2G32460.2 49.618 131 65 1 10 140 4 133 1.95e-39 146
MsaG040482 AT1G68320.1 52.381 126 60 0 10 135 17 142 3.50e-39 141
MsaG040482 AT3G30210.1 47.651 149 76 2 13 159 28 176 4.62e-39 140
MsaG040482 AT4G13480.1 60.952 105 41 0 13 117 7 111 5.39e-39 140
MsaG040482 AT3G24310.1 60.000 105 42 0 13 117 19 123 7.50e-39 140
MsaG040482 AT1G48000.1 57.692 104 44 0 11 114 31 134 5.20e-38 137
MsaG040482 AT1G66370.1 48.921 139 65 2 12 144 8 146 2.92e-37 135
MsaG040482 AT2G47190.1 51.351 111 54 0 12 122 20 130 1.01e-36 134
MsaG040482 AT5G59780.3 53.153 111 52 0 9 119 5 115 2.99e-36 132
MsaG040482 AT3G53200.1 56.075 107 47 0 9 115 6 112 9.51e-36 130
MsaG040482 AT3G46130.1 54.206 107 49 0 13 119 10 116 1.42e-35 131
MsaG040482 AT3G60460.1 52.101 119 50 2 9 126 8 120 1.53e-35 132
MsaG040482 AT2G26950.1 48.696 115 56 1 6 120 10 121 2.07e-35 133
MsaG040482 AT1G25340.2 51.667 120 53 1 13 132 19 133 9.20e-35 129
MsaG040482 AT3G06490.1 58.559 111 46 0 12 122 19 129 1.33e-34 130
MsaG040482 AT1G25340.3 51.667 120 53 1 13 132 19 133 2.25e-34 129
MsaG040482 AT1G56650.1 52.000 125 52 1 12 128 8 132 3.26e-34 127
MsaG040482 AT1G66380.1 60.577 104 41 0 12 115 8 111 3.33e-34 123
MsaG040482 AT1G66390.1 58.491 106 44 0 10 115 6 111 2.30e-32 122
MsaG040482 AT5G49620.1 54.955 111 50 0 12 122 26 136 2.48e-32 123
MsaG040482 AT5G35550.2 39.806 206 105 7 45 241 50 245 2.40e-31 120
MsaG040482 AT3G12820.2 69.444 72 22 0 48 119 2 73 9.04e-31 116
MsaG040482 AT3G27810.2 59.740 77 31 0 45 121 4 80 8.10e-30 113
MsaG040482 AT5G14750.3 63.636 77 25 1 40 116 13 86 8.80e-30 113
MsaG040482 AT5G49620.2 48.800 125 50 1 12 122 26 150 8.65e-29 114
MsaG040482 AT1G22640.3 64.865 74 26 0 58 131 1 74 1.13e-28 110
MsaG040482 AT5G40350.2 60.526 76 30 0 45 120 5 80 2.55e-28 109
MsaG040482 AT3G47600.2 53.125 96 41 1 23 118 21 112 3.75e-28 112
MsaG040482 AT3G46130.3 61.842 76 29 0 44 119 9 84 3.96e-28 110
MsaG040482 AT3G46130.4 61.039 77 30 0 43 119 18 94 7.11e-28 110
MsaG040482 AT5G59780.2 61.039 77 30 0 43 119 18 94 7.89e-28 109
MsaG040482 AT1G18960.1 45.455 121 59 4 14 132 10 125 8.02e-28 111
MsaG040482 AT3G53200.2 63.158 76 28 0 40 115 4 79 8.08e-28 108
MsaG040482 AT4G18770.1 45.946 111 59 1 9 119 212 321 1.60e-27 112
MsaG040482 AT3G27785.1 44.167 120 62 3 9 125 184 301 4.49e-26 108
MsaG040482 AT5G67300.1 50.980 102 49 1 14 115 6 106 7.00e-26 106
MsaG040482 AT5G02320.1 48.571 105 53 1 12 116 125 228 1.64e-25 108
MsaG040482 AT5G02320.2 48.571 105 53 1 12 116 125 228 1.64e-25 108
MsaG040482 AT5G02320.3 48.571 105 53 1 12 116 65 168 1.74e-25 107
MsaG040482 AT3G09370.1 50.000 104 51 1 12 115 128 230 1.92e-25 107
MsaG040482 AT4G37260.1 50.467 107 52 1 14 120 13 118 1.96e-25 105
MsaG040482 AT3G09370.2 50.000 104 51 1 12 115 133 235 2.03e-25 107
MsaG040482 AT1G71030.2 55.844 77 34 0 51 127 5 81 2.15e-25 101
MsaG040482 AT5G40360.1 42.453 106 60 1 9 114 153 257 2.55e-25 105
MsaG040482 AT1G71030.1 55.844 77 34 0 51 127 19 95 2.71e-25 101
MsaG040482 AT3G09370.3 50.000 104 51 1 12 115 141 243 3.29e-25 107
MsaG040482 AT3G50060.1 40.127 157 89 3 14 170 6 157 3.90e-25 103
MsaG040482 AT2G39880.1 53.398 103 45 2 14 115 50 150 4.96e-25 105
MsaG040482 AT3G55730.1 53.398 103 45 2 14 115 56 156 7.83e-25 104
MsaG040482 AT5G58850.1 38.760 129 73 2 10 138 101 223 8.10e-25 105
MsaG040482 AT1G69560.1 41.964 112 62 2 9 119 102 211 1.63e-24 102
MsaG040482 AT1G17950.1 42.453 106 60 1 14 119 5 109 1.68e-24 101
MsaG040482 AT3G09230.1 47.573 103 53 1 14 116 55 156 1.93e-24 103
MsaG040482 AT1G69560.2 41.964 112 62 2 9 119 118 227 2.14e-24 102
MsaG040482 AT5G11510.3 47.170 106 55 1 11 116 78 182 2.54e-24 105
MsaG040482 AT5G11510.1 47.170 106 55 1 11 116 78 182 2.54e-24 105
MsaG040482 AT5G11510.4 47.170 106 55 1 11 116 78 182 2.54e-24 105
MsaG040482 AT5G11050.1 42.157 102 58 1 14 115 105 205 2.65e-24 103
MsaG040482 AT3G23250.2 41.892 148 60 4 58 192 1 135 2.90e-24 100
MsaG040482 AT2G23290.1 50.980 102 49 1 14 115 13 113 2.97e-24 101
MsaG040482 AT5G11510.2 47.170 106 55 1 11 116 78 182 3.84e-24 104
MsaG040482 AT5G11510.5 47.170 106 55 1 11 116 78 182 3.99e-24 104
MsaG040482 AT4G32730.5 46.226 106 56 1 11 116 84 188 1.22e-23 103
MsaG040482 AT4G32730.4 46.226 106 56 1 11 116 84 188 1.22e-23 103
MsaG040482 AT4G32730.3 46.226 106 56 1 11 116 84 188 1.22e-23 103
MsaG040482 AT4G32730.2 46.226 106 56 1 11 116 84 188 1.22e-23 103
MsaG040482 AT4G32730.1 46.226 106 56 1 11 116 84 188 1.27e-23 103
MsaG040482 AT1G26780.1 43.519 108 58 2 12 118 96 201 1.64e-23 99.0
MsaG040482 AT1G26780.2 43.519 108 58 2 12 118 96 201 1.74e-23 100
MsaG040482 AT1G73410.1 46.226 106 54 2 14 118 6 109 1.86e-23 98.2
MsaG040482 AT1G73410.2 46.226 106 54 2 14 118 6 109 6.41e-23 95.5
MsaG040482 AT1G66380.3 59.740 77 31 0 39 115 2 78 1.79e-22 91.3
MsaG040482 AT2G25230.1 39.837 123 71 2 9 129 21 142 2.36e-22 94.7
MsaG040482 AT1G66380.2 55.422 83 37 0 10 92 6 88 7.02e-22 90.1
MsaG040482 AT4G33450.1 37.190 121 72 2 1 118 3 122 7.78e-22 94.0
MsaG040482 AT3G29020.2 39.623 106 63 1 14 119 67 171 1.53e-21 94.0
MsaG040482 AT3G29020.1 39.623 106 63 1 14 119 65 169 1.92e-21 92.4
MsaG040482 AT5G17800.1 39.048 105 63 1 14 118 93 196 2.21e-21 94.0
MsaG040482 AT5G14750.4 62.712 59 22 0 58 116 1 59 5.41e-21 88.6
MsaG040482 AT5G14750.2 62.712 59 22 0 58 116 1 59 5.41e-21 88.6
MsaG040482 AT2G02820.3 37.815 119 72 2 4 121 19 136 3.39e-19 87.8
MsaG040482 AT2G02820.1 37.815 119 72 2 4 121 19 136 4.14e-19 89.0
MsaG040482 AT2G02820.2 37.815 119 72 2 4 121 19 136 4.91e-19 89.0
MsaG040482 AT4G00540.2 41.818 110 60 2 12 118 101 209 1.22e-18 87.0
MsaG040482 AT5G40430.1 38.393 112 67 2 9 120 49 158 1.83e-18 84.3
MsaG040482 AT4G00540.1 41.818 110 60 2 12 118 99 207 2.28e-18 86.7
MsaG040482 AT1G14350.2 39.048 105 63 1 17 121 28 131 5.19e-18 85.5
MsaG040482 AT1G14350.1 39.048 105 63 1 17 121 28 131 5.19e-18 85.5
MsaG040482 AT5G61420.1 64.407 59 19 1 81 137 2 60 2.10e-17 82.0
MsaG040482 AT2G37630.1 36.522 115 66 2 17 124 7 121 3.05e-17 82.8
MsaG040482 AT5G39700.1 33.621 116 76 1 9 124 51 165 4.36e-16 76.3
MsaG040482 AT1G74430.2 59.615 52 21 0 77 128 8 59 3.79e-15 73.9
MsaG040482 AT4G28110.2 70.732 41 12 0 88 128 4 44 2.56e-14 71.6
MsaG040482 AT5G15310.3 68.889 45 14 0 88 132 9 53 1.12e-13 70.5
MsaG040482 AT5G59780.1 59.574 47 19 0 73 119 4 50 2.83e-13 67.8
MsaG040482 AT3G46130.2 59.574 47 19 0 73 119 4 50 3.81e-13 68.2
MsaG040482 AT4G25560.2 71.111 45 13 0 71 115 3 47 4.21e-13 68.6
MsaG040482 AT5G14340.2 39.535 86 45 3 88 172 10 89 7.84e-13 67.0
MsaG040482 AT1G14350.3 43.939 66 37 0 56 121 23 88 3.17e-12 67.8
MsaG040482 AT1G14350.4 43.939 66 37 0 56 121 23 88 3.17e-12 67.8
MsaG040482 AT1G22640.2 61.364 44 17 0 88 131 16 59 4.86e-12 64.7
MsaG040482 AT3G18100.1 36.458 96 60 1 13 108 545 639 1.72e-11 66.2
MsaG040482 AT3G18100.4 36.458 96 60 1 13 108 384 478 2.06e-11 65.9
MsaG040482 AT3G18100.3 36.458 96 60 1 13 108 497 591 2.70e-11 65.5
MsaG040482 AT3G18100.2 36.458 96 60 1 13 108 332 426 2.71e-11 65.5

Find 78 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAAGAGTTTGGATTATT+TGG 0.116986 7:-100643207 None:intergenic
GATTTAGGCCCTGATGGTTT+AGG 0.252849 7:+100643582 MsaT040482.1:CDS
TTGAATCATATTACTAAATA+TGG 0.254773 7:+100642315 MsaT040482.1:CDS
TCTTATAATATAGCAGCTTT+TGG 0.280061 7:+100643645 MsaT040482.1:CDS
GATAAGATACTATTCTTCAT+AGG 0.304611 7:-100643408 None:intergenic
ATTTAGGCCCTGATGGTTTA+GGG 0.313997 7:+100643583 MsaT040482.1:CDS
AGAATAGTATCTTATCTTCT+TGG 0.317415 7:+100643415 MsaT040482.1:CDS
ATAAAGCCTGCCACAGATTT+AGG 0.320366 7:+100643567 MsaT040482.1:CDS
ATAATGAAATAAAGAATCTT+TGG 0.322110 7:+100642863 MsaT040482.1:CDS
AAAGGTGTGGTAAGAGTTGC+AGG 0.322879 7:+100642500 MsaT040482.1:CDS
GAATAGTATCTTATCTTCTT+GGG 0.325673 7:+100643416 MsaT040482.1:CDS
TGAAGATTGTTTAGGCTCAT+AGG 0.335997 7:-100643076 None:intergenic
TTGAACCAATGAGAAGAGTT+TGG 0.356074 7:-100643216 None:intergenic
ATAGGAAACAGCATCTGATT+TGG 0.364879 7:-100643058 None:intergenic
GGAAGAAATGAGGTATTAGT+TGG 0.366998 7:-100643312 None:intergenic
CAAAGGTTATTCAACTGAAA+TGG 0.369898 7:+100643107 MsaT040482.1:CDS
AGGACAATTGAAGATTGTTT+AGG 0.372326 7:-100643084 None:intergenic
ATATTTCTGCTGCTTTCTCT+TGG 0.373195 7:-100642993 None:intergenic
TTCTTGTTCCAACTATTTGA+TGG 0.388346 7:+100643140 MsaT040482.1:CDS
ATTGAACTTCATTCAGTACT+AGG 0.389828 7:+100642595 MsaT040482.1:CDS
TCTCATTGGTTCAACCAAAC+AGG 0.390750 7:+100643225 MsaT040482.1:CDS
GATGTGTAATTCATCTGAAT+AGG 0.392658 7:-100643171 None:intergenic
ATAATCCAAACTCTTCTCAT+TGG 0.399767 7:+100643211 MsaT040482.1:CDS
GTAATTTCCCATCAAATAGT+TGG 0.401184 7:-100643148 None:intergenic
TTGAGAAGATTCTTGTTGCT+TGG 0.413002 7:-100643622 None:intergenic
AAGTACTTTCTGATCTCATA+AGG 0.429540 7:-100643035 None:intergenic
CAAATTGCTGCACAATTGCC+AGG 0.435074 7:+100642832 MsaT040482.1:CDS
AAAGAAGAAACTGAGACAAA+AGG 0.438499 7:+100642897 MsaT040482.1:CDS
AATTCAGAGTTCATGTCAAA+AGG 0.443007 7:-100643255 None:intergenic
ATTATGTCCCCTAAACCATC+AGG 0.449694 7:-100643591 None:intergenic
TTCATTCAGTACTAGGGAAT+AGG 0.458093 7:+100642602 MsaT040482.1:CDS
GAAGAAATGAGGTATTAGTT+GGG 0.458948 7:-100643311 None:intergenic
TTTCAGTTGAATAACCTTTG+AGG 0.461827 7:-100643104 None:intergenic
GAAAGTGGTTTATGAGTGAC+AGG 0.465506 7:-100642928 None:intergenic
GTGGTAAGAGTTGCAGGCTT+AGG 0.466298 7:+100642506 MsaT040482.1:CDS
TGTTTGATTCTCTTTAATAG+AGG 0.466549 7:-100643457 None:intergenic
AAGAAGAAACTGAGACAAAA+GGG 0.474216 7:+100642898 MsaT040482.1:CDS
CTAAATATGGTCATGGATGT+TGG 0.475014 7:+100642328 MsaT040482.1:CDS
GTTGCTACAAGCAGAAGCTT+AGG 0.481348 7:+100642256 MsaT040482.1:CDS
TAATATATACCTGCTTGCTT+AGG 0.482505 7:-100642360 None:intergenic
GCCACAGATTTAGGCCCTGA+TGG 0.492844 7:+100643576 MsaT040482.1:CDS
TCTTGTTCCAACTATTTGAT+GGG 0.507060 7:+100643141 MsaT040482.1:CDS
ATAAGATACTATTCTTCATA+GGG 0.510246 7:-100643407 None:intergenic
ATGTGTAATTCATCTGAATA+GGG 0.511653 7:-100643170 None:intergenic
GGTAGAAAATGTTGATGAAG+AGG 0.516385 7:+100642954 MsaT040482.1:CDS
AGAAGCTTAGGAAAGGTCTA+TGG 0.519654 7:+100642268 MsaT040482.1:CDS
GTAAGAGTTGCAGGCTTAGG+TGG 0.530842 7:+100642509 MsaT040482.1:CDS
AAAAGTATTGGGAAGAAATG+AGG 0.537696 7:-100643322 None:intergenic
CAATCTTCAATTGTCCTCAA+AGG 0.538889 7:+100643090 MsaT040482.1:CDS
ATTTCATTATCAGTCCTCCC+TGG 0.548205 7:-100642850 None:intergenic
CATATTACTAAATATGGTCA+TGG 0.549148 7:+100642321 MsaT040482.1:CDS
TTGAACTTCATTCAGTACTA+GGG 0.552884 7:+100642596 MsaT040482.1:CDS
AGGTCTATGGTCACCTGAGG+AGG 0.556622 7:+100642281 MsaT040482.1:CDS
TTAGGTGGATTAATTACTTG+AGG 0.558206 7:+100642524 MsaT040482.1:CDS
TTATTCAACTGAAATGGAAG+TGG 0.560042 7:+100643113 MsaT040482.1:CDS
AATAGTATCTTATCTTCTTG+GGG 0.560835 7:+100643417 MsaT040482.1:CDS
TTATTGGCACAGGTCTTCAA+AGG 0.561994 7:+100642482 MsaT040482.1:intron
TCAGGGCCTAAATCTGTGGC+AGG 0.565813 7:-100643573 None:intergenic
TCAACTGAAATGGAAGTGGA+AGG 0.579991 7:+100643117 MsaT040482.1:CDS
GTGAAGATACTCATTCCACT+TGG 0.581545 7:-100643493 None:intergenic
AGTTCAGTTCCTAAGCAAGC+AGG 0.581863 7:+100642351 MsaT040482.1:CDS
TTTAGGCCCTGATGGTTTAG+GGG 0.584861 7:+100643584 MsaT040482.1:CDS
CACTCATAAACCACTTTCTG+AGG 0.586110 7:+100642933 MsaT040482.1:CDS
GACATAGAAACATCTTGTGA+AGG 0.586534 7:-100643372 None:intergenic
ATTATTTGGAATATTATCAG+TGG 0.586790 7:-100643193 None:intergenic
AAGAAATGAGGTATTAGTTG+GGG 0.597506 7:-100643310 None:intergenic
GAAGGAACATCATCAAGTGA+TGG 0.602005 7:-100643354 None:intergenic
CAGAAGAAGAAGAAGCCAAG+TGG 0.603165 7:+100643478 MsaT040482.1:CDS
ACCATCAGGGCCTAAATCTG+TGG 0.616487 7:-100643577 None:intergenic
GGCACAGGTCTTCAAAGGTG+TGG 0.623503 7:+100642487 MsaT040482.1:intron
GATTCTTGTTGCTTGGAATG+TGG 0.641176 7:-100643615 None:intergenic
AAATTGCTGCACAATTGCCA+GGG 0.642018 7:+100642833 MsaT040482.1:CDS
TTGCTGCACAATTGCCAGGG+AGG 0.646864 7:+100642836 MsaT040482.1:CDS
TACAAGCAGAAGCTTAGGAA+AGG 0.647918 7:+100642261 MsaT040482.1:CDS
GAAAGGTCTATGGTCACCTG+AGG 0.676025 7:+100642278 MsaT040482.1:CDS
TTATGTCCCCTAAACCATCA+GGG 0.688532 7:-100643590 None:intergenic
AGAAATGAGGTATTAGTTGG+GGG 0.699843 7:-100643309 None:intergenic
AAAGTGGTTTATGAGTGACA+GGG 0.778051 7:-100642927 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 100642240 100643677 100642240 ID=MsaG040482
Chr7 mRNA 100642240 100643677 100642240 ID=MsaT040482.1;Parent=MsaG040482
Chr7 exon 100642240 100642372 100642240 ID=MsaT040482.1.exon1;Parent=MsaT040482.1
Chr7 CDS 100642240 100642372 100642240 ID=cds.MsaT040482.1;Parent=MsaT040482.1
Chr7 exon 100642494 100642623 100642494 ID=MsaT040482.1.exon2;Parent=MsaT040482.1
Chr7 CDS 100642494 100642623 100642494 ID=cds.MsaT040482.1;Parent=MsaT040482.1
Chr7 exon 100642825 100643677 100642825 ID=MsaT040482.1.exon3;Parent=MsaT040482.1
Chr7 CDS 100642825 100643677 100642825 ID=cds.MsaT040482.1;Parent=MsaT040482.1
Gene Sequence

>MsaT040482.1

ATGGGAAGACACTCTTGTTGCTACAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCTGAGGAGGATGAAAAACTTTTGAATCATATTACTAAATATGGTCATGGATGTTGGAGTTCAGTTCCTAAGCAAGCAGGTCTTCAAAGGTGTGGTAAGAGTTGCAGGCTTAGGTGGATTAATTACTTGAGGCCTGATTTAAAAAGAGGTACATTTTCACAAGAAGAAGAAAATCTCATCATTGAACTTCATTCAGTACTAGGGAATAGATGGTCACAAATTGCTGCACAATTGCCAGGGAGGACTGATAATGAAATAAAGAATCTTTGGAATTCTTGCTTAAAGAAGAAACTGAGACAAAAGGGTATAGACCCTGTCACTCATAAACCACTTTCTGAGGTAGAAAATGTTGATGAAGAGGAAGAAAAAACAAGAAGCCAAGAGAAAGCAGCAGAAATATCAGAATCAGATGAATTGAACCTTATGAGATCAGAAAGTACTTCCAAATCAGATGCTGTTTCCTATGAGCCTAAACAATCTTCAATTGTCCTCAAAGGTTATTCAACTGAAATGGAAGTGGAAGGTTCTTGTTCCAACTATTTGATGGGAAATTACCCTATTCAGATGAATTACACATCCACTGATAATATTCCAAATAATCCAAACTCTTCTCATTGGTTCAACCAAACAGGATTAAAACCTTTTGACATGAACTCTGAATTTACTTCAACTTCTAACATCATGTCAATTCTTCCCCCAACTAATACCTCATTTCTTCCCAATACTTTTTGCTACAAACCATCACTTGATGATGTTCCTTCACAAGATGTTTCTATGTCTTCATCTTCTTTCCCTATGAAGAATAGTATCTTATCTTCTTGGGGAATTACAGATTGTGACACCTCTATTAAAGAGAATCAAACAGAAGAAGAAGAAGCCAAGTGGAATGAGTATCTTCACAATCCAATGTTAATGCTACAAAATCAAGCATCTGAATCTTTATGCAATGAAATAAAGCCTGCCACAGATTTAGGCCCTGATGGTTTAGGGGACATAATGCCACATTCCAAGCAACAAGAATCTTCTCAATCTTATAATATAGCAGCTTTTGGACAAGTGTAG

Protein sequence

>MsaT040482.1

MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVENVDEEEEKTRSQEKAAEISESDELNLMRSESTSKSDAVSYEPKQSSIVLKGYSTEMEVEGSCSNYLMGNYPIQMNYTSTDNIPNNPNSSHWFNQTGLKPFDMNSEFTSTSNIMSILPPTNTSFLPNTFCYKPSLDDVPSQDVSMSSSSFPMKNSILSSWGITDCDTSIKENQTEEEEAKWNEYLHNPMLMLQNQASESLCNEIKPATDLGPDGLGDIMPHSKQQESSQSYNIAAFGQV*