AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG040508

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040508 MtrunA17_Chr7g0271241 87.042 409 23 9 1 407 1 381 0.0 644
MsaG040508 MtrunA17_Chr1g0193371 55.609 419 123 18 1 406 1 369 5.40e-124 363
MsaG040508 MtrunA17_Chr1g0193801 50.523 287 118 8 1 275 1 275 8.81e-85 263
MsaG040508 MtrunA17_Chr7g0270891 89.313 131 14 0 1 131 1 131 1.83e-84 262
MsaG040508 MtrunA17_Chr4g0058631 81.679 131 24 0 1 131 1 131 4.47e-77 243
MsaG040508 MtrunA17_Chr3g0117091 78.571 140 30 0 1 140 1 140 1.59e-76 241
MsaG040508 MtrunA17_Chr1g0211161 80.769 130 25 0 3 132 4 133 7.24e-74 230
MsaG040508 MtrunA17_Chr2g0330041 74.809 131 33 0 1 131 1 131 1.07e-68 222
MsaG040508 MtrunA17_Chr8g0342521 76.423 123 29 0 1 123 1 123 5.09e-67 216
MsaG040508 MtrunA17_Chr8g0342541 75.610 123 30 0 1 123 1 123 1.74e-66 215
MsaG040508 MtrunA17_Chr2g0309911 70.000 130 38 1 1 130 1 129 1.28e-64 209
MsaG040508 MtrunA17_Chr3g0131121 56.790 162 67 1 1 162 1 159 9.31e-63 204
MsaG040508 MtrunA17_Chr4g0039971 67.969 128 41 0 1 128 2 129 2.25e-62 204
MsaG040508 MtrunA17_Chr8g0385321 68.217 129 41 0 1 129 1 129 3.65e-62 202
MsaG040508 MtrunA17_Chr3g0115821 65.649 131 45 0 1 131 1 131 4.17e-62 204
MsaG040508 MtrunA17_Chr6g0453471 69.531 128 39 0 1 128 1 128 6.83e-62 203
MsaG040508 MtrunA17_Chr5g0434571 64.085 142 51 0 1 142 37 178 1.91e-61 202
MsaG040508 MtrunA17_Chr7g0217741 67.939 131 42 0 1 131 1 131 1.95e-61 201
MsaG040508 MtrunA17_Chr4g0037141 53.488 172 79 1 1 172 1 171 2.77e-61 199
MsaG040508 MtrunA17_Chr8g0342481 76.923 117 26 1 1 116 1 117 4.04e-61 202
MsaG040508 MtrunA17_Chr4g0042671 69.531 128 39 0 1 128 1 128 4.51e-61 202
MsaG040508 MtrunA17_Chr8g0387421 70.339 118 35 0 1 118 1 118 1.46e-60 199
MsaG040508 MtrunA17_Chr3g0110351 67.692 130 42 0 1 130 1 130 9.36e-60 196
MsaG040508 MtrunA17_Chr4g0032401 81.308 107 20 0 11 117 16 122 1.58e-59 196
MsaG040508 MtrunA17_Chr5g0410961 63.158 133 49 0 1 133 1 133 3.20e-59 196
MsaG040508 MtrunA17_Chr2g0328771 48.276 232 84 7 12 217 20 241 3.48e-59 195
MsaG040508 MtrunA17_Chr5g0435101 64.800 125 44 0 3 127 2 126 3.74e-59 191
MsaG040508 MtrunA17_Chr8g0349261 66.667 132 42 2 1 130 1 132 4.20e-59 194
MsaG040508 MtrunA17_Chr7g0228891 65.649 131 45 0 1 131 1 131 5.25e-59 193
MsaG040508 MtrunA17_Chr4g0057031 65.116 129 45 0 1 129 1 129 9.55e-59 192
MsaG040508 MtrunA17_Chr1g0203411 67.797 118 38 0 1 118 1 118 1.61e-58 192
MsaG040508 MtrunA17_Chr2g0281071 65.116 129 44 1 1 128 1 129 4.29e-58 193
MsaG040508 MtrunA17_Chr5g0397231 72.727 110 30 0 1 110 1 110 5.02e-58 192
MsaG040508 MtrunA17_Chr3g0103281 65.385 130 45 0 1 130 1 130 9.52e-58 191
MsaG040508 MtrunA17_Chr2g0323411 66.406 128 43 0 1 128 1 128 1.29e-57 191
MsaG040508 MtrunA17_Chr5g0395281 66.667 123 41 0 12 134 12 134 2.78e-57 190
MsaG040508 MtrunA17_Chr4g0048511 64.341 129 45 1 1 128 1 129 3.24e-57 191
MsaG040508 MtrunA17_Chr3g0088461 77.982 109 24 0 9 117 19 127 3.91e-57 191
MsaG040508 MtrunA17_Chr4g0044421 66.667 126 42 0 1 126 1 126 1.22e-56 184
MsaG040508 MtrunA17_Chr1g0187761 69.492 118 36 0 1 118 1 118 8.03e-56 184
MsaG040508 MtrunA17_Chr1g0203441 71.074 121 34 1 9 129 10 129 1.40e-55 184
MsaG040508 MtrunA17_Chr6g0452271 60.305 131 52 0 1 131 1 131 1.61e-55 186
MsaG040508 MtrunA17_Chr6g0470971 69.919 123 36 1 9 130 11 133 1.06e-54 182
MsaG040508 MtrunA17_Chr1g0167661 46.602 206 86 4 1 203 1 185 5.25e-54 179
MsaG040508 MtrunA17_Chr7g0274581 61.864 118 45 0 1 118 1 118 1.66e-52 174
MsaG040508 MtrunA17_Chr3g0121241 62.097 124 47 0 6 129 36 159 5.94e-52 176
MsaG040508 MtrunA17_Chr5g0417821 64.706 119 42 0 12 130 7 125 8.54e-52 175
MsaG040508 MtrunA17_Chr1g0167691 65.517 116 40 0 1 116 1 116 9.66e-52 174
MsaG040508 MtrunA17_Chr4g0070611 44.395 223 116 4 1 217 1 221 9.84e-52 175
MsaG040508 MtrunA17_Chr7g0261281 63.559 118 43 0 1 118 1 118 2.50e-51 173
MsaG040508 MtrunA17_Chr2g0323351 55.245 143 62 1 1 143 1 141 2.91e-50 170
MsaG040508 MtrunA17_Chr4g0070641 64.103 117 42 0 1 117 1 117 1.67e-49 165
MsaG040508 MtrunA17_Chr4g0068061 65.517 116 40 0 1 116 1 116 3.24e-49 170
MsaG040508 MtrunA17_Chr8g0342511 80.460 87 17 0 1 87 1 87 1.35e-48 160
MsaG040508 MtrunA17_Chr8g0346561 61.864 118 45 0 1 118 1 118 2.03e-48 166
MsaG040508 MtrunA17_Chr2g0311221 64.220 109 39 0 2 110 4 112 4.19e-48 166
MsaG040508 MtrunA17_Chr1g0151941 58.120 117 48 1 1 116 1 117 6.01e-48 164
MsaG040508 MtrunA17_Chr7g0275911 62.393 117 44 0 1 117 1 117 7.48e-48 164
MsaG040508 MtrunA17_Chr8g0342531 77.528 89 20 0 1 89 1 89 8.56e-48 160
MsaG040508 MtrunA17_Chr1g0152011 63.333 120 43 1 1 119 1 120 8.78e-48 166
MsaG040508 MtrunA17_Chr4g0022931 59.829 117 47 0 5 121 6 122 1.20e-47 164
MsaG040508 MtrunA17_Chr7g0217221 62.712 118 44 0 1 118 1 118 1.52e-47 163
MsaG040508 MtrunA17_Chr4g0028311 63.248 117 42 1 1 116 1 117 5.13e-47 163
MsaG040508 MtrunA17_Chr1g0194951 64.655 116 41 0 1 116 1 116 5.56e-47 165
MsaG040508 MtrunA17_Chr4g0022901 62.162 111 42 0 5 115 6 116 9.15e-47 161
MsaG040508 MtrunA17_Chr3g0135311 61.538 117 44 1 1 116 1 117 1.18e-46 163
MsaG040508 MtrunA17_Chr5g0400821 50.000 160 74 2 1 159 1 155 2.97e-46 161
MsaG040508 MtrunA17_Chr3g0092401 61.017 118 46 0 1 118 2 119 1.06e-45 159
MsaG040508 MtrunA17_Chr4g0054391 37.584 298 147 9 1 265 1 292 1.13e-45 159
MsaG040508 MtrunA17_Chr4g0060721 53.472 144 57 2 1 142 2 137 1.34e-45 160
MsaG040508 MtrunA17_Chr4g0022911 58.621 116 47 1 1 115 1 116 2.08e-45 158
MsaG040508 MtrunA17_Chr2g0327351 63.964 111 39 1 1 110 1 111 6.46e-45 158
MsaG040508 MtrunA17_Chr7g0254411 58.400 125 50 1 1 123 1 125 8.37e-45 158
MsaG040508 MtrunA17_Chr7g0264641 59.829 117 46 1 1 116 1 117 1.30e-44 155
MsaG040508 MtrunA17_Chr8g0342461 74.444 90 22 1 1 89 1 90 3.92e-44 150
MsaG040508 MtrunA17_Chr1g0168661 60.526 114 45 0 4 117 13 126 1.28e-43 152
MsaG040508 MtrunA17_Chr8g0342471 74.444 90 22 1 1 89 1 90 1.41e-43 149
MsaG040508 MtrunA17_Chr6g0453211 61.818 110 42 0 1 110 1 110 3.29e-43 153
MsaG040508 MtrunA17_Chr1g0186061 61.261 111 43 0 5 115 13 123 7.30e-43 150
MsaG040508 MtrunA17_Chr7g0228231 57.500 120 49 1 1 118 1 120 1.54e-42 148
MsaG040508 MtrunA17_Chr7g0269831 64.655 116 41 0 1 116 1 116 1.95e-42 152
MsaG040508 MtrunA17_Chr7g0247131 70.455 88 26 0 43 130 9 96 2.75e-42 149
MsaG040508 MtrunA17_Chr6g0450101 60.185 108 43 0 11 118 13 120 3.51e-42 147
MsaG040508 MtrunA17_Chr4g0022881 53.788 132 54 1 1 125 1 132 6.14e-42 147
MsaG040508 MtrunA17_Chr4g0022891 60.360 111 44 0 9 119 9 119 1.01e-41 147
MsaG040508 MtrunA17_Chr3g0099131 60.748 107 42 0 12 118 41 147 1.26e-41 154
MsaG040508 MtrunA17_Chr4g0072751 59.459 111 44 1 1 110 1 111 2.29e-41 149
MsaG040508 MtrunA17_Chr4g0042611 67.045 88 29 0 1 88 1 88 3.24e-41 140
MsaG040508 MtrunA17_Chr1g0209661 56.250 112 49 0 11 122 26 137 4.70e-41 147
MsaG040508 MtrunA17_Chr1g0194301 54.310 116 53 0 12 127 33 148 6.82e-41 146
MsaG040508 MtrunA17_Chr4g0055981 50.704 142 67 1 9 147 52 193 7.16e-41 144
MsaG040508 MtrunA17_Chr8g0343831 60.000 110 44 0 10 119 6 115 1.37e-40 144
MsaG040508 MtrunA17_Chr6g0487491 55.645 124 46 2 1 115 1 124 1.66e-40 144
MsaG040508 MtrunA17_Chr1g0154031 60.577 104 41 0 12 115 76 179 4.61e-40 147
MsaG040508 MtrunA17_Chr1g0194291 56.897 116 50 0 12 127 21 136 7.80e-40 143
MsaG040508 MtrunA17_Chr8g0354661 59.615 104 42 0 12 115 37 140 4.38e-39 147
MsaG040508 MtrunA17_Chr3g0080861 56.604 106 46 0 12 117 37 142 8.85e-39 145
MsaG040508 MtrunA17_Chr1g0180391 56.604 106 46 0 12 117 19 124 1.68e-38 138
MsaG040508 MtrunA17_Chr7g0240821 56.757 111 48 0 17 127 6 116 1.12e-37 136
MsaG040508 MtrunA17_Chr2g0322521 62.500 104 39 0 12 115 29 132 1.91e-37 140
MsaG040508 MtrunA17_Chr5g0434931 54.545 110 50 0 12 121 35 144 4.57e-37 136
MsaG040508 MtrunA17_Chr5g0434911 53.982 113 52 0 7 119 16 128 7.75e-37 135
MsaG040508 MtrunA17_Chr5g0434831 59.048 105 43 0 12 116 7 111 9.24e-37 132
MsaG040508 MtrunA17_Chr2g0293911 55.172 116 52 0 12 127 24 139 2.14e-36 135
MsaG040508 MtrunA17_Chr4g0068921 55.172 116 52 0 12 127 24 139 2.66e-36 131
MsaG040508 MtrunA17_Chr5g0440781 53.571 112 50 2 13 123 13 123 6.23e-36 130
MsaG040508 MtrunA17_Chr1g0192411 55.140 107 48 0 11 117 11 117 1.56e-35 135
MsaG040508 MtrunA17_Chr7g0220341 56.364 110 46 1 12 119 25 134 2.56e-35 131
MsaG040508 MtrunA17_Chr5g0441141 53.571 112 50 2 13 123 13 123 2.56e-35 131
MsaG040508 MtrunA17_Chr5g0440761 53.571 112 50 2 13 123 13 123 2.87e-35 130
MsaG040508 MtrunA17_Chr2g0327821 50.450 111 55 0 9 119 3 113 3.17e-35 130
MsaG040508 MtrunA17_Chr5g0434841 57.143 105 45 0 12 116 20 124 5.31e-35 131
MsaG040508 MtrunA17_Chr7g0228991 56.190 105 46 0 12 116 29 133 1.30e-34 129
MsaG040508 MtrunA17_Chr4g0030881 51.754 114 48 1 13 119 8 121 1.40e-34 129
MsaG040508 MtrunA17_Chr2g0294811 61.364 88 34 0 1 88 1 88 2.32e-34 124
MsaG040508 MtrunA17_Chr8g0360111 57.426 101 43 0 12 112 25 125 3.60e-34 127
MsaG040508 MtrunA17_Chr5g0441131 51.786 112 52 2 13 123 10 120 1.25e-32 121
MsaG040508 MtrunA17_Chr4g0013361 43.709 151 77 5 12 160 10 154 5.86e-32 122
MsaG040508 MtrunA17_Chr8g0334881 52.336 107 50 1 9 114 7 113 1.84e-31 122
MsaG040508 MtrunA17_Chr3g0099141 58.824 85 35 0 12 96 40 124 2.88e-31 116
MsaG040508 MtrunA17_Chr2g0323321 59.302 86 35 0 7 92 6 91 4.33e-31 115
MsaG040508 MtrunA17_Chr5g0395221 62.500 80 30 0 9 88 9 88 2.09e-30 112
MsaG040508 MtrunA17_Chr5g0401731 37.173 191 102 5 14 203 15 188 2.20e-30 119
MsaG040508 MtrunA17_Chr3g0093811 59.551 89 36 0 43 131 13 101 5.66e-30 116
MsaG040508 MtrunA17_Chr4g0008551 42.105 152 74 4 14 164 38 176 3.51e-28 113
MsaG040508 MtrunA17_Chr6g0454921 53.398 103 45 2 14 115 15 115 3.73e-28 110
MsaG040508 MtrunA17_Chr5g0429661 46.667 105 53 2 12 115 120 222 7.19e-28 112
MsaG040508 MtrunA17_Chr4g0053431 53.922 102 46 1 14 115 5 105 1.20e-27 110
MsaG040508 MtrunA17_Chr7g0238631 51.402 107 49 2 11 116 110 214 6.24e-27 112
MsaG040508 MtrunA17_Chr3g0133601 50.980 102 49 1 14 115 37 137 2.92e-26 105
MsaG040508 MtrunA17_Chr3g0139671 48.598 107 52 2 11 116 82 186 1.11e-25 109
MsaG040508 MtrunA17_Chr3g0117511 45.872 109 55 3 14 120 183 289 1.59e-25 107
MsaG040508 MtrunA17_Chr1g0157731 46.729 107 54 2 11 116 88 192 2.26e-24 105
MsaG040508 MtrunA17_Chr6g0480581 42.991 107 58 2 14 119 4 108 2.89e-24 100
MsaG040508 MtrunA17_Chr5g0417621 42.727 110 60 2 11 119 131 238 3.69e-24 103
MsaG040508 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 4.16e-24 96.3
MsaG040508 MtrunA17_Chr4g0058991 41.071 112 63 2 9 119 204 313 5.82e-24 103
MsaG040508 MtrunA17_Chr6g0453751 53.763 93 34 2 12 95 20 112 6.27e-24 96.3
MsaG040508 MtrunA17_Chr7g0229101 60.563 71 28 0 43 113 3 73 9.45e-24 98.2
MsaG040508 MtrunA17_Chr4g0042501 42.991 107 58 2 14 119 105 209 1.27e-23 102
MsaG040508 MtrunA17_Chr7g0229131 58.333 72 30 0 43 114 3 74 3.86e-23 95.5
MsaG040508 MtrunA17_Chr5g0437321 49.000 100 48 2 14 112 19 116 1.45e-22 96.7
MsaG040508 MtrunA17_Chr6g0460661 45.745 94 48 2 14 106 16 107 7.15e-22 91.7
MsaG040508 MtrunA17_Chr1g0177901 40.157 127 63 4 24 142 7 128 8.82e-22 92.8
MsaG040508 MtrunA17_Chr7g0228531 40.566 106 61 2 14 119 220 323 1.72e-21 95.9
MsaG040508 MtrunA17_Chr5g0425591 51.190 84 40 1 13 95 10 93 1.79e-21 88.2
MsaG040508 MtrunA17_Chr3g0125801 43.925 107 57 2 14 119 16 120 2.10e-21 93.6
MsaG040508 MtrunA17_Chr6g0460671 42.453 106 58 2 14 118 99 202 5.77e-21 93.2
MsaG040508 MtrunA17_Chr5g0397841 47.000 100 50 2 12 110 108 205 9.09e-21 94.0
MsaG040508 MtrunA17_Chr7g0228401 45.556 90 46 2 25 113 290 377 7.16e-20 91.7
MsaG040508 MtrunA17_Chr7g0228481 40.000 110 61 3 14 120 220 327 9.07e-19 87.8
MsaG040508 MtrunA17_Chr7g0254261 36.585 123 75 2 8 129 83 203 1.43e-18 86.3
MsaG040508 MtrunA17_Chr7g0233061 39.815 108 59 4 14 118 180 284 9.66e-18 84.0
MsaG040508 MtrunA17_Chr7g0238651 36.522 115 65 2 17 123 10 124 5.30e-17 82.0
MsaG040508 MtrunA17_Chr1g0193901 50.562 89 42 2 10 96 9 97 3.82e-16 73.9
MsaG040508 MtrunA17_Chr1g0193891 50.562 89 42 2 10 96 9 97 3.82e-16 73.9
MsaG040508 MtrunA17_Chr1g0193871 50.562 89 42 2 10 96 9 97 3.82e-16 73.9
MsaG040508 MtrunA17_Chr1g0193881 50.562 89 42 2 10 96 9 97 3.82e-16 73.9
MsaG040508 MtrunA17_Chr5g0416341 35.238 105 67 1 17 121 29 132 9.87e-16 79.0
MsaG040508 MtrunA17_Chr8g0362231 34.711 121 77 2 17 137 25 143 6.42e-15 76.3
MsaG040508 MtrunA17_Chr5g0395231 58.824 51 21 0 78 128 5 55 1.15e-13 70.5
MsaG040508 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 1.38e-12 62.8
MsaG040508 MtrunA17_Chr7g0247141 57.447 47 19 1 1 46 1 47 1.70e-12 62.4
MsaG040508 MtrunA17_Chr4g0042621 72.500 40 11 0 89 128 15 54 3.45e-12 67.0
MsaG040508 MtrunA17_Chr3g0104491 37.179 78 44 2 53 125 1 78 5.62e-12 65.9
MsaG040508 MtrunA17_Chr3g0145551 60.465 43 17 0 91 133 1 43 7.83e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG040508 AT1G09540.1 44.601 426 156 13 1 406 1 366 1.99e-101 306
MsaG040508 AT1G57560.2 85.294 136 20 0 1 136 1 136 3.89e-85 261
MsaG040508 AT1G57560.1 87.786 131 16 0 1 131 1 131 2.35e-84 260
MsaG040508 AT4G01680.3 81.818 143 26 0 1 143 1 143 3.40e-84 257
MsaG040508 AT5G26660.1 47.112 329 141 8 1 322 1 303 7.33e-84 260
MsaG040508 AT4G01680.1 79.730 148 30 0 1 148 1 148 6.11e-83 257
MsaG040508 AT4G01680.2 73.750 160 30 1 1 148 1 160 1.59e-79 249
MsaG040508 AT3G12720.1 73.016 126 33 1 1 126 12 136 3.26e-66 213
MsaG040508 AT3G13890.2 80.172 116 23 0 1 116 1 116 3.90e-66 215
MsaG040508 AT3G61250.1 49.020 204 97 3 1 198 1 203 5.31e-63 205
MsaG040508 AT3G13890.1 74.400 125 23 1 1 116 1 125 5.74e-63 207
MsaG040508 AT4G12350.1 55.556 171 72 1 1 167 1 171 1.09e-62 203
MsaG040508 AT4G34990.1 58.710 155 64 0 1 155 1 155 4.24e-62 201
MsaG040508 AT1G63910.1 67.969 128 41 0 1 128 1 128 6.48e-62 204
MsaG040508 AT4G38620.1 58.282 163 64 2 1 159 1 163 8.52e-62 201
MsaG040508 AT3G02940.2 65.152 132 46 0 1 132 1 132 9.63e-62 202
MsaG040508 AT5G65230.1 52.332 193 67 3 1 174 1 187 1.15e-61 202
MsaG040508 AT5G15310.1 68.182 132 42 0 1 132 1 132 1.24e-61 202
MsaG040508 AT5G15310.2 68.182 132 42 0 1 132 1 132 1.56e-61 201
MsaG040508 AT5G15310.4 68.702 131 41 0 1 131 1 131 1.72e-61 199
MsaG040508 AT3G02940.1 65.152 132 46 0 1 132 1 132 2.32e-61 201
MsaG040508 AT3G02940.3 65.152 132 46 0 1 132 1 132 2.32e-61 201
MsaG040508 AT3G01140.2 70.079 127 38 0 1 127 1 127 3.25e-61 201
MsaG040508 AT5G16600.1 67.939 131 42 0 1 131 1 131 3.67e-61 201
MsaG040508 AT1G34670.1 66.412 131 44 0 1 131 1 131 4.15e-61 202
MsaG040508 AT5G16770.4 65.649 131 45 0 1 131 1 131 7.56e-61 200
MsaG040508 AT5G16770.3 65.649 131 45 0 1 131 1 131 7.56e-61 200
MsaG040508 AT1G22640.1 64.394 132 47 0 1 132 1 132 9.71e-61 197
MsaG040508 AT5G16770.1 65.649 131 45 0 1 131 1 131 2.08e-60 199
MsaG040508 AT5G16770.2 65.649 131 45 0 1 131 1 131 2.08e-60 199
MsaG040508 AT2G16720.1 65.649 131 45 0 1 131 1 131 2.56e-60 197
MsaG040508 AT4G21440.1 66.406 128 43 0 1 128 1 128 2.65e-60 199
MsaG040508 AT4G22680.1 55.556 162 70 2 1 160 1 162 8.11e-60 195
MsaG040508 AT5G10280.1 64.885 131 46 0 1 131 1 131 1.18e-59 197
MsaG040508 AT4G09460.1 59.441 143 58 0 1 143 1 143 3.04e-59 193
MsaG040508 AT4G05100.1 65.116 129 44 1 1 128 1 129 3.04e-59 196
MsaG040508 AT1G66230.1 65.385 130 45 0 1 130 1 130 1.15e-58 193
MsaG040508 AT3G01140.1 70.492 122 36 0 6 127 49 170 2.34e-58 195
MsaG040508 AT5G60890.1 62.016 129 49 0 1 129 1 129 2.39e-58 192
MsaG040508 AT5G56110.1 66.154 130 44 0 1 130 1 130 2.58e-58 193
MsaG040508 AT4G28110.1 63.281 128 47 0 1 128 1 128 6.30e-58 191
MsaG040508 AT1G18570.1 58.000 150 60 2 1 149 1 148 1.36e-57 192
MsaG040508 AT5G14340.1 60.000 140 56 0 1 140 13 152 6.45e-57 188
MsaG040508 AT5G12870.1 75.229 109 27 0 10 118 16 124 2.34e-56 187
MsaG040508 AT1G35515.1 61.832 131 50 0 1 131 1 131 2.73e-56 184
MsaG040508 AT4G17785.2 36.228 334 164 8 1 287 1 332 3.93e-56 188
MsaG040508 AT4G17785.1 36.228 334 164 8 1 287 1 332 6.07e-56 188
MsaG040508 AT1G74430.1 65.625 128 44 0 1 128 1 128 1.08e-55 185
MsaG040508 AT5G54230.1 65.625 128 44 0 1 128 1 128 1.21e-55 186
MsaG040508 AT5G62320.1 57.143 147 56 1 2 141 3 149 2.66e-55 183
MsaG040508 AT1G06180.1 69.828 116 35 0 1 116 1 116 4.47e-55 182
MsaG040508 AT5G07690.1 57.857 140 59 0 1 140 1 140 5.21e-55 185
MsaG040508 AT3G13540.1 57.353 136 58 0 6 141 17 152 1.11e-54 181
MsaG040508 AT3G08500.1 70.940 117 31 1 4 117 19 135 1.33e-54 184
MsaG040508 AT3G23250.1 50.000 170 75 2 1 170 1 160 1.72e-54 182
MsaG040508 AT5G61420.2 60.000 130 52 0 1 130 1 130 1.88e-54 184
MsaG040508 AT1G74080.1 60.465 129 51 0 1 129 1 129 1.27e-53 181
MsaG040508 AT2G31180.1 46.667 195 87 2 1 178 1 195 3.91e-53 177
MsaG040508 AT5G07700.1 57.778 135 57 0 1 135 1 135 1.46e-52 179
MsaG040508 AT5G07700.2 57.778 135 57 0 1 135 1 135 1.46e-52 179
MsaG040508 AT1G56160.1 66.957 115 38 0 2 116 4 118 2.82e-52 177
MsaG040508 AT3G28470.1 63.359 131 48 0 1 131 1 131 3.98e-52 177
MsaG040508 AT1G79180.1 65.812 117 40 0 2 118 4 120 2.90e-51 174
MsaG040508 AT1G18710.1 58.915 129 53 0 1 129 1 129 3.64e-50 170
MsaG040508 AT1G16490.1 64.348 115 41 0 2 116 4 118 1.22e-49 169
MsaG040508 AT3G48920.1 56.522 138 48 2 9 146 15 140 1.64e-48 166
MsaG040508 AT5G52260.1 71.028 107 31 0 9 115 9 115 6.45e-48 164
MsaG040508 AT5G62470.2 62.712 118 44 0 1 118 1 118 9.67e-48 166
MsaG040508 AT3G12820.1 61.538 117 45 0 3 119 5 121 1.47e-47 162
MsaG040508 AT3G47600.1 62.712 118 44 0 1 118 1 118 1.89e-47 165
MsaG040508 AT5G23000.1 63.248 117 42 1 1 116 1 117 3.65e-47 164
MsaG040508 AT5G49330.1 64.655 116 41 0 1 116 1 116 6.39e-47 164
MsaG040508 AT4G25560.1 67.593 108 35 0 8 115 6 113 8.56e-47 162
MsaG040508 AT5G26660.2 81.818 88 16 0 45 132 14 101 1.31e-46 162
MsaG040508 AT5G57620.1 62.393 117 43 1 1 116 1 117 1.65e-46 163
MsaG040508 AT3G49690.1 62.500 120 44 1 1 119 1 120 1.99e-46 162
MsaG040508 AT3G62610.1 62.069 116 44 0 1 116 1 116 2.73e-46 162
MsaG040508 AT2G47460.1 62.931 116 43 0 1 116 1 116 3.72e-46 163
MsaG040508 AT5G65790.1 61.667 120 45 1 1 119 1 120 4.76e-46 162
MsaG040508 AT5G62470.1 62.712 118 43 1 1 118 1 117 6.39e-46 162
MsaG040508 AT1G74650.1 62.931 116 43 0 1 116 1 116 7.46e-46 161
MsaG040508 AT1G08810.1 59.836 122 49 0 1 122 1 122 4.30e-45 157
MsaG040508 AT4G37780.1 59.167 120 48 1 1 119 1 120 1.39e-44 157
MsaG040508 AT2G36890.1 57.031 128 54 1 1 127 1 128 1.63e-44 156
MsaG040508 AT5G14750.1 60.000 115 44 1 13 127 17 129 1.82e-44 153
MsaG040508 AT1G79180.2 51.333 150 40 1 2 118 4 153 2.27e-44 157
MsaG040508 AT2G36890.2 57.480 127 53 1 1 126 42 168 3.33e-44 157
MsaG040508 AT3G28910.1 57.480 127 52 1 1 127 1 125 3.99e-44 156
MsaG040508 AT5G35550.1 55.072 138 60 1 1 136 1 138 7.07e-44 154
MsaG040508 AT3G01530.1 61.321 106 41 0 12 117 25 130 2.38e-43 150
MsaG040508 AT3G27810.1 57.522 113 48 0 9 121 17 129 3.62e-43 150
MsaG040508 AT5G40350.1 58.182 110 46 0 11 120 16 125 8.82e-43 149
MsaG040508 AT5G40330.1 60.577 104 41 0 13 116 13 116 1.24e-42 149
MsaG040508 AT5G06100.1 49.375 160 76 3 12 168 32 189 1.45e-42 155
MsaG040508 AT3G27920.1 58.879 107 44 0 10 116 12 118 2.96e-42 148
MsaG040508 AT2G26960.1 59.292 113 45 1 9 121 17 128 3.41e-42 154
MsaG040508 AT4G13480.1 65.714 105 36 0 13 117 7 111 4.59e-42 149
MsaG040508 AT5G06100.5 49.375 160 76 3 12 168 32 189 6.01e-42 155
MsaG040508 AT5G06100.2 49.375 160 76 3 12 168 32 189 6.01e-42 155
MsaG040508 AT5G06100.3 49.375 160 76 3 12 168 32 189 6.01e-42 155
MsaG040508 AT5G06100.4 49.375 160 76 3 12 168 32 189 6.01e-42 155
MsaG040508 AT3G24310.1 64.762 105 37 0 13 117 19 123 7.84e-42 149
MsaG040508 AT5G52600.1 58.879 107 44 0 9 115 9 115 7.83e-41 144
MsaG040508 AT3G30210.1 63.810 105 38 0 13 117 28 132 9.93e-41 146
MsaG040508 AT1G48000.1 56.410 117 51 0 11 127 31 147 2.37e-40 144
MsaG040508 AT5G55020.1 60.748 107 42 0 12 118 26 132 2.88e-40 150
MsaG040508 AT1G68320.1 54.167 120 55 0 10 129 17 136 3.41e-40 145
MsaG040508 AT3G11440.2 38.647 207 104 5 12 211 41 231 6.31e-40 148
MsaG040508 AT2G32460.2 49.630 135 67 1 10 144 4 137 1.95e-39 147
MsaG040508 AT2G32460.1 49.630 135 67 1 10 144 16 149 1.98e-39 147
MsaG040508 AT3G11440.3 38.095 210 107 5 9 211 38 231 2.25e-39 148
MsaG040508 AT3G11440.4 38.095 210 107 5 9 211 38 231 2.25e-39 148
MsaG040508 AT3G11440.1 38.095 210 107 5 9 211 38 231 2.25e-39 148
MsaG040508 AT1G25340.1 54.783 115 52 0 13 127 19 133 4.62e-39 142
MsaG040508 AT4G26930.1 52.308 130 57 3 12 141 19 143 6.17e-39 144
MsaG040508 AT2G47190.1 42.593 162 90 2 12 173 20 178 3.18e-38 139
MsaG040508 AT3G06490.1 56.897 116 50 0 12 127 19 134 2.09e-37 138
MsaG040508 AT5G59780.3 54.054 111 51 0 9 119 5 115 9.85e-37 134
MsaG040508 AT3G53200.1 44.667 150 78 1 9 158 6 150 1.97e-36 133
MsaG040508 AT3G46130.1 55.140 107 48 0 13 119 10 116 3.50e-36 133
MsaG040508 AT5G49620.1 55.172 116 52 0 12 127 26 141 4.03e-36 134
MsaG040508 AT1G66370.1 45.342 161 66 3 12 150 8 168 1.18e-35 131
MsaG040508 AT2G26950.1 48.276 116 59 1 6 121 10 124 1.63e-35 134
MsaG040508 AT1G25340.2 52.174 115 50 1 13 127 19 128 2.82e-34 129
MsaG040508 AT1G25340.3 52.174 115 50 1 13 127 19 128 6.65e-34 129
MsaG040508 AT1G56650.1 47.097 155 61 3 12 145 8 162 5.74e-33 124
MsaG040508 AT1G66380.1 59.615 104 42 0 12 115 8 111 7.18e-33 120
MsaG040508 AT5G49620.2 49.231 130 52 1 12 127 26 155 1.47e-32 125
MsaG040508 AT3G60460.1 52.336 107 50 1 9 114 8 114 1.94e-32 124
MsaG040508 AT1G66390.1 57.547 106 45 0 10 115 6 111 4.43e-31 119
MsaG040508 AT5G35550.2 61.702 94 36 0 43 136 48 141 8.15e-31 119
MsaG040508 AT5G14750.3 66.250 80 25 1 48 127 18 95 4.47e-30 114
MsaG040508 AT3G12820.2 68.056 72 23 0 48 119 2 73 5.90e-30 114
MsaG040508 AT3G27810.2 61.039 77 30 0 45 121 4 80 1.07e-29 113
MsaG040508 AT3G47600.2 57.895 95 36 1 24 118 22 112 1.16e-29 117
MsaG040508 AT5G40350.2 60.526 76 30 0 45 120 5 80 4.55e-29 111
MsaG040508 AT3G46130.3 63.158 76 28 0 44 119 9 84 1.90e-28 112
MsaG040508 AT1G22640.3 64.865 74 26 0 58 131 1 74 1.93e-28 110
MsaG040508 AT5G58850.1 40.000 155 84 4 12 165 103 249 2.84e-28 115
MsaG040508 AT5G59780.2 64.000 75 27 0 45 119 20 94 4.59e-28 110
MsaG040508 AT3G46130.4 64.000 75 27 0 45 119 20 94 4.97e-28 110
MsaG040508 AT3G53200.2 47.368 114 55 1 45 158 9 117 1.61e-27 108
MsaG040508 AT4G37260.1 51.852 108 49 2 14 120 13 118 3.16e-27 110
MsaG040508 AT5G02320.1 41.176 170 82 6 11 164 124 291 4.83e-27 113
MsaG040508 AT5G02320.2 41.176 170 82 6 11 164 124 291 4.83e-27 113
MsaG040508 AT5G02320.3 41.176 170 82 6 11 164 64 231 5.54e-27 112
MsaG040508 AT3G27785.1 45.299 117 59 3 9 122 184 298 7.69e-27 111
MsaG040508 AT4G18770.1 44.643 112 59 2 9 119 212 321 1.66e-26 110
MsaG040508 AT1G18960.1 44.538 119 59 4 14 130 10 123 4.50e-26 107
MsaG040508 AT2G23290.1 52.427 103 46 2 14 115 13 113 7.22e-26 107
MsaG040508 AT5G67300.1 50.485 103 48 2 14 115 6 106 7.66e-26 106
MsaG040508 AT5G40360.1 42.453 106 60 1 9 114 153 257 1.56e-25 107
MsaG040508 AT3G09370.3 37.569 181 98 4 12 191 141 307 1.78e-25 108
MsaG040508 AT5G11050.1 44.660 103 54 2 14 115 105 205 2.00e-25 107
MsaG040508 AT3G09370.1 37.569 181 98 4 12 191 128 294 2.01e-25 108
MsaG040508 AT3G09370.2 37.569 181 98 4 12 191 133 299 2.08e-25 108
MsaG040508 AT3G50060.1 43.750 128 68 3 14 140 6 130 2.90e-25 105
MsaG040508 AT3G55730.1 42.763 152 58 4 14 145 56 198 4.02e-25 106
MsaG040508 AT3G09230.1 50.000 104 49 2 14 116 55 156 5.80e-25 105
MsaG040508 AT1G69560.1 42.857 112 61 2 9 119 102 211 6.63e-25 104
MsaG040508 AT1G71030.2 57.143 77 33 0 51 127 5 81 6.88e-25 100
MsaG040508 AT1G69560.2 42.857 112 61 2 9 119 118 227 7.51e-25 104
MsaG040508 AT2G39880.1 52.427 103 46 2 14 115 50 150 7.89e-25 105
MsaG040508 AT1G71030.1 57.143 77 33 0 51 127 19 95 1.01e-24 100
MsaG040508 AT3G23250.2 45.536 112 51 2 58 169 1 102 3.46e-24 100
MsaG040508 AT1G26780.1 44.444 108 57 2 12 118 96 201 4.54e-24 101
MsaG040508 AT1G26780.2 44.444 108 57 2 12 118 96 201 6.14e-24 102
MsaG040508 AT1G17950.1 43.925 107 57 2 14 119 5 109 6.37e-24 100
MsaG040508 AT5G11510.3 46.729 107 54 2 11 116 78 182 9.26e-24 104
MsaG040508 AT5G11510.1 46.729 107 54 2 11 116 78 182 9.26e-24 104
MsaG040508 AT5G11510.4 46.729 107 54 2 11 116 78 182 9.26e-24 104
MsaG040508 AT5G11510.2 46.729 107 54 2 11 116 78 182 1.28e-23 103
MsaG040508 AT5G11510.5 46.729 107 54 2 11 116 78 182 1.47e-23 103
MsaG040508 AT4G32730.1 45.794 107 55 2 11 116 84 188 2.90e-23 102
MsaG040508 AT4G32730.5 45.794 107 55 2 11 116 84 188 3.04e-23 102
MsaG040508 AT4G32730.4 45.794 107 55 2 11 116 84 188 3.04e-23 102
MsaG040508 AT4G32730.3 45.794 107 55 2 11 116 84 188 3.04e-23 102
MsaG040508 AT4G32730.2 45.794 107 55 2 11 116 84 188 3.04e-23 102
MsaG040508 AT1G73410.1 45.283 106 55 2 14 118 6 109 8.75e-23 96.7
MsaG040508 AT1G66380.3 59.740 77 31 0 39 115 2 78 1.11e-22 92.4
MsaG040508 AT1G73410.2 45.283 106 55 2 14 118 6 109 3.26e-22 94.0
MsaG040508 AT2G25230.1 42.857 105 57 2 17 120 29 131 1.40e-21 93.2
MsaG040508 AT5G14750.4 64.516 62 22 0 58 119 1 62 3.29e-21 89.7
MsaG040508 AT5G14750.2 64.516 62 22 0 58 119 1 62 3.29e-21 89.7
MsaG040508 AT1G66380.2 57.692 78 33 0 12 89 8 85 1.54e-20 86.7
MsaG040508 AT4G33450.1 37.838 111 66 2 9 118 14 122 1.68e-20 90.5
MsaG040508 AT3G29020.1 38.318 107 63 2 14 119 65 169 1.89e-20 90.1
MsaG040508 AT3G29020.2 38.318 107 63 2 14 119 67 171 3.03e-20 90.9
MsaG040508 AT5G17800.1 39.048 105 63 1 14 118 93 196 4.89e-20 90.5
MsaG040508 AT2G02820.3 36.090 133 83 2 4 135 19 150 4.85e-18 85.1
MsaG040508 AT4G00540.2 42.342 111 58 3 12 118 101 209 6.25e-18 85.5
MsaG040508 AT2G02820.1 36.090 133 83 2 4 135 19 150 7.24e-18 85.5
MsaG040508 AT4G00540.1 42.342 111 58 3 12 118 99 207 1.09e-17 85.1
MsaG040508 AT2G02820.2 37.815 119 72 2 4 121 19 136 1.25e-17 85.1
MsaG040508 AT5G40430.1 38.318 107 62 3 9 114 49 152 4.87e-17 80.9
MsaG040508 AT1G14350.2 35.200 125 72 2 17 141 28 143 1.12e-16 82.0
MsaG040508 AT1G14350.1 35.200 125 72 2 17 141 28 143 1.12e-16 82.0
MsaG040508 AT2G37630.1 34.454 119 76 1 17 133 7 125 4.26e-15 76.6
MsaG040508 AT5G61420.1 64.000 50 18 0 81 130 2 51 5.81e-15 75.5
MsaG040508 AT5G39700.1 34.234 111 72 1 9 119 51 160 7.79e-15 73.2
MsaG040508 AT5G59780.1 58.000 50 21 0 70 119 1 50 1.48e-13 68.9
MsaG040508 AT3G46130.2 58.000 50 21 0 70 119 1 50 1.71e-13 69.3
MsaG040508 AT4G28110.2 68.293 41 13 0 88 128 4 44 3.59e-13 68.6
MsaG040508 AT1G74430.2 66.667 42 14 0 87 128 18 59 3.90e-13 68.6
MsaG040508 AT1G22640.2 62.222 45 17 0 88 132 16 60 4.39e-13 67.8
MsaG040508 AT4G25560.2 60.377 53 20 1 70 121 2 54 1.96e-12 66.6
MsaG040508 AT5G15310.3 61.224 49 19 0 84 132 5 53 3.84e-12 66.2
MsaG040508 AT5G14340.2 52.830 53 25 0 88 140 10 62 7.89e-12 64.3
MsaG040508 AT3G18100.1 36.458 96 60 1 13 108 545 639 2.06e-11 66.2
MsaG040508 AT3G18100.3 36.458 96 60 1 13 108 497 591 2.83e-11 65.9
MsaG040508 AT3G18100.4 36.458 96 60 1 13 108 384 478 2.91e-11 65.9
MsaG040508 AT3G18100.2 36.458 96 60 1 13 108 332 426 4.62e-11 65.1
MsaG040508 AT1G14350.3 36.047 86 47 1 56 141 23 100 5.09e-11 64.3
MsaG040508 AT1G14350.4 36.047 86 47 1 56 141 23 100 5.09e-11 64.3
MsaG040508 AT3G28910.2 55.769 52 21 1 78 129 2 51 6.27e-11 62.8

Find 60 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTTGTACCGGCTAATTT+TGG 0.166668 7:+100978399 None:intergenic
GGGATTCAAAACTGGGAATT+TGG 0.217605 7:-100977357 MsaT040508.1:CDS
CTGTTGTTGTTGTTGGAATT+TGG 0.221338 7:+100977531 None:intergenic
TTATCCATAGGAATAGAATT+TGG 0.264129 7:+100977696 None:intergenic
ATCTCATTGTCTGTTCTTCC+AGG 0.266646 7:+100977912 None:intergenic
GATGATTTGTGTTTGGAGTT+TGG 0.284873 7:+100977412 None:intergenic
AAATAGATTCTTCACTTCAT+TGG 0.293702 7:+100977734 None:intergenic
ATACCTTCTGATAATATGAT+TGG 0.321312 7:-100977618 MsaT040508.1:CDS
TCTGATAATATGATTGGATT+AGG 0.329996 7:-100977612 MsaT040508.1:CDS
AGAAGCTTCGTAAAGGTCTT+TGG 0.331287 7:-100978491 MsaT040508.1:CDS
TAGTAGAAGAAGACATTAAA+TGG 0.357656 7:-100977254 MsaT040508.1:CDS
GAGTGCATGAAGTTCAATTA+TGG 0.367556 7:+100978157 None:intergenic
AAGAAGAAGCTAAAGCAAAA+AGG 0.367784 7:-100977864 MsaT040508.1:CDS
GAGAATGGTTGGTGTGTGTT+TGG 0.373639 7:+100977834 None:intergenic
AAGTTGATGGGATTCAAAAC+TGG 0.391933 7:-100977365 MsaT040508.1:CDS
CCAACATCCATGACCATGTT+TGG 0.396862 7:+100978431 None:intergenic
TTATGAGGTTAAACAAGAAA+TGG 0.400366 7:-100977136 MsaT040508.1:CDS
AAGTGAACTGTTGTTGTTGT+TGG 0.401109 7:+100977524 None:intergenic
TGAGGTGGATAAATTATCTA+AGG 0.408050 7:-100978223 MsaT040508.1:CDS
TTTGAAGGATGATTTGTGTT+TGG 0.410112 7:+100977405 None:intergenic
TATCTACAATGATAATTATG+AGG 0.411745 7:-100977151 MsaT040508.1:CDS
TTGTCATTGTTCTCAGAGAA+TGG 0.430460 7:+100977819 None:intergenic
AAATCCAAATTCTATTCCTA+TGG 0.434974 7:-100977700 MsaT040508.1:CDS
AATGCTCCTCTCTTCAAATC+AGG 0.437135 7:+100978200 None:intergenic
ATATCCTCTGGTGAAGTTGA+TGG 0.440161 7:-100977378 MsaT040508.1:CDS
CAGATTGCAGCTCAGTTACC+TGG 0.453409 7:-100977930 MsaT040508.1:CDS
CCAGAGGATATAGAATTTGA+AGG 0.456217 7:+100977390 None:intergenic
TTCATGCACTCCTAGGCAAC+AGG 0.471657 7:-100978145 MsaT040508.1:intron
CATTGTTCTCAGAGAATGGT+TGG 0.496170 7:+100977823 None:intergenic
CCAAACATGGTCATGGATGT+TGG 0.497424 7:-100978431 MsaT040508.1:CDS
TATCCTCTGGTGAAGTTGAT+GGG 0.501245 7:-100977377 MsaT040508.1:CDS
ATTGAACTTCATGCACTCCT+AGG 0.501954 7:-100978152 MsaT040508.1:CDS
CCTTCAAATTCTATATCCTC+TGG 0.506664 7:-100977390 MsaT040508.1:CDS
ATTATTGGTACCTGTTGCCT+AGG 0.519891 7:+100978135 None:intergenic
GATAATATGATTGGATTAGG+AGG 0.542857 7:-100977609 MsaT040508.1:CDS
AGCTCAGTTCCAAAATTAGC+CGG 0.545198 7:-100978408 MsaT040508.1:intron
CTAAGGCCTGATTTGAAGAG+AGG 0.548695 7:-100978206 MsaT040508.1:CDS
ATCTGAATATTGTCAGTCAT+AGG 0.553088 7:+100977777 None:intergenic
GAATTAGCAGCTTCAAAATG+AGG 0.555614 7:+100977063 None:intergenic
TTGAATTATATCACCAAACA+TGG 0.555661 7:-100978444 MsaT040508.1:CDS
CATTTGAGAGCAAGTAGAAG+TGG 0.556588 7:+100977476 None:intergenic
TATATCACCAAACATGGTCA+TGG 0.565539 7:-100978438 MsaT040508.1:CDS
AGTTGATGGGATTCAAAACT+GGG 0.565732 7:-100977364 MsaT040508.1:CDS
ATTCAAAACTGGGAATTTGG+TGG 0.568240 7:-100977354 MsaT040508.1:CDS
TGCTTCATACCAAGTACTAG+TGG 0.570925 7:-100977501 MsaT040508.1:CDS
TACAAGCAGAAGCTTCGTAA+AGG 0.572527 7:-100978498 MsaT040508.1:CDS
GATTATCTTGATGATGATCA+AGG 0.572583 7:+100977283 None:intergenic
CATATATGTCAGGTTTGCAA+AGG 0.573277 7:-100978265 MsaT040508.1:intron
GAAGTGGAACCACTAGTACT+TGG 0.579651 7:+100977492 None:intergenic
GGTGGAAGCAAAAGCAGCAA+TGG 0.583904 7:-100977336 MsaT040508.1:CDS
GGATAATTGCAATTATCCAT+AGG 0.590102 7:+100977684 None:intergenic
AATCCAATCATATTATCAGA+AGG 0.613198 7:+100977615 None:intergenic
ATGTCAGGTTTGCAAAGGTG+TGG 0.628146 7:-100978260 MsaT040508.1:intron
CACTTCATTGGATCCCACAG+AGG 0.634128 7:+100977746 None:intergenic
AATCCCATCAACTTCACCAG+AGG 0.648801 7:+100977374 None:intergenic
TTCAATCAAGTAGTAGCACA+TGG 0.651827 7:-100977089 MsaT040508.1:CDS
GCAAAAGCTGTAGATTGAGG+TGG 0.662689 7:-100978238 MsaT040508.1:CDS
GAACATAGAATGAAACATGG+TGG 0.664282 7:+100977434 None:intergenic
GTGGCAAAAGCTGTAGATTG+AGG 0.666838 7:-100978241 MsaT040508.1:CDS
TTGGAACATAGAATGAAACA+TGG 0.723711 7:+100977431 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr7 gene 100976999 100978541 100976999 ID=MsaG040508
Chr7 mRNA 100976999 100978541 100976999 ID=MsaT040508.1;Parent=MsaG040508
Chr7 exon 100976999 100977959 100976999 ID=MsaT040508.1.exon3;Parent=MsaT040508.1
Chr7 CDS 100976999 100977959 100976999 ID=cds.MsaT040508.1;Parent=MsaT040508.1
Chr7 exon 100978146 100978275 100978146 ID=MsaT040508.1.exon2;Parent=MsaT040508.1
Chr7 CDS 100978146 100978275 100978146 ID=cds.MsaT040508.1;Parent=MsaT040508.1
Chr7 exon 100978409 100978541 100978409 ID=MsaT040508.1.exon1;Parent=MsaT040508.1
Chr7 CDS 100978409 100978541 100978409 ID=cds.MsaT040508.1;Parent=MsaT040508.1
Gene Sequence

>MsaT040508.1

ATGGGAAGACATTCTTGTTGCTACAAGCAGAAGCTTCGTAAAGGTCTTTGGTCTCCAGAAGAAGATGAAAAGCTTTTGAATTATATCACCAAACATGGTCATGGATGTTGGAGCTCAGTTCCAAAATTAGCCGGTTTGCAAAGGTGTGGCAAAAGCTGTAGATTGAGGTGGATAAATTATCTAAGGCCTGATTTGAAGAGAGGAGCATTCTCAGAGCAAGAAGAGAATTCCATAATTGAACTTCATGCACTCCTAGGCAACAGGTGGTCGCAGATTGCAGCTCAGTTACCTGGAAGAACAGACAATGAGATAAAAAATCTATGGAATTCAAGTCTGAAGAAGAAGCTAAAGCAAAAAGGAATTGATCCAAACACACACCAACCATTCTCTGAGAACAATGACAATAATGACAAGCAGCAATTACCTATGACTGACAATATTCAGATTCAAAAAACCTCTGTGGGATCCAATGAAGTGAAGAATCTATTTGATGATACACTAAATCCAAATTCTATTCCTATGGATAATTGCAATTATCCCCTTGAAATTAATTCAAAAATCAACAACTCAGTTAATTGCTTCATACCTTCTGATAATATGATTGGATTAGGAGGATCATATCTCAATTTTCAACAACTTAACTATGGAATTAATAACATGACTCTATCTCCAAATTCCAACAACAACAACAGTTCACTTTGCTTCATACCAAGTACTAGTGGTTCCACTTCTACTTGCTCTCAAATGATGTCAGAATTCAATTCTTCCACCATGTTTCATTCTATGTTCCAAACTCCAAACACAAATCATCCTTCAAATTCTATATCCTCTGGTGAAGTTGATGGGATTCAAAACTGGGAATTTGGTGGAAGCAAAAGCAGCAATGGAAGCAAAAGCAGCAGTAGCAACATTAATTACCTTGATCATCATCAAGATAATCATCAAGTAGTAGAAGAAGACATTAAATGGTCTGATTATATAAACTCTAGTCCATTTTTTCTTGGAAACAACAACACATTTCAGCAGCAGAATCATCAAACACACTCTTCTATCTACAATGATAATTATGAGGTTAAACAAGAAATGGAGTTCATTAATACAAACGAATCTATTCAATCAAGTAGTAGCACATGGCATCCTCATTTTGAAGCTGCTAATTCAGATATATATAGCAACAAAGATCTTCAAAGATTTTCAATGGCTTTTGGACAAACACTTAATTAG
Protein sequence

>MsaT040508.1

MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSEQEENSIIELHALLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLKQKGIDPNTHQPFSENNDNNDKQQLPMTDNIQIQKTSVGSNEVKNLFDDTLNPNSIPMDNCNYPLEINSKINNSVNCFIPSDNMIGLGGSYLNFQQLNYGINNMTLSPNSNNNNSSLCFIPSTSGSTSTCSQMMSEFNSSTMFHSMFQTPNTNHPSNSISSGEVDGIQNWEFGGSKSSNGSKSSSSNINYLDHHQDNHQVVEEDIKWSDYINSSPFFLGNNNTFQQQNHQTHSSIYNDNYEVKQEMEFINTNESIQSSSSTWHPHFEAANSDIYSNKDLQRFSMAFGQTLN*