Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040789 | GAU13573.1 | 87.860 | 659 | 43 | 2 | 27 | 648 | 74 | 732 | 0.0 | 1174 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040789 | sp|Q9ZTP3|EIN4_ARATH | 68.281 | 413 | 128 | 2 | 27 | 437 | 68 | 479 | 0.0 | 556 |
MsaG040789 | sp|Q9ZTP3|EIN4_ARATH | 58.911 | 202 | 77 | 1 | 451 | 646 | 565 | 766 | 3.63e-71 | 248 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040789 | tr|A0A2K3PDM6|A0A2K3PDM6_TRIPR | 76.287 | 738 | 52 | 8 | 4 | 648 | 1 | 708 | 0.0 | 1083 |
Gene ID | Type | Classification |
---|---|---|
MsaG040789 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040789 | MtrunA17_Chr7g0274831 | 96.635 | 416 | 14 | 0 | 27 | 442 | 77 | 492 | 0.0 | 828 |
MsaG040789 | MtrunA17_Chr7g0274831 | 97.222 | 216 | 4 | 1 | 435 | 648 | 550 | 765 | 4.67e-142 | 432 |
MsaG040789 | MtrunA17_Chr1g0190021 | 74.713 | 435 | 100 | 3 | 28 | 452 | 71 | 505 | 0.0 | 638 |
MsaG040789 | MtrunA17_Chr1g0190021 | 66.514 | 218 | 68 | 3 | 435 | 648 | 546 | 762 | 3.10e-90 | 296 |
MsaG040789 | MtrunA17_Chr1g0186431 | 62.077 | 443 | 163 | 3 | 21 | 463 | 66 | 503 | 0.0 | 565 |
MsaG040789 | MtrunA17_Chr1g0186431 | 51.010 | 198 | 92 | 1 | 452 | 644 | 560 | 757 | 5.77e-60 | 214 |
MsaG040789 | MtrunA17_Chr1g0168161 | 58.950 | 419 | 165 | 4 | 21 | 437 | 65 | 478 | 3.46e-173 | 512 |
MsaG040789 | MtrunA17_Chr1g0168161 | 49.246 | 199 | 94 | 3 | 450 | 641 | 559 | 757 | 6.33e-54 | 197 |
MsaG040789 | MtrunA17_Chr4g0013831 | 42.889 | 443 | 231 | 5 | 3 | 432 | 18 | 451 | 4.43e-104 | 332 |
MsaG040789 | MtrunA17_Chr4g0013831 | 35.567 | 194 | 114 | 5 | 457 | 643 | 545 | 734 | 4.80e-27 | 117 |
MsaG040789 | MtrunA17_Chr7g0269631 | 40.492 | 447 | 236 | 7 | 8 | 437 | 23 | 456 | 7.29e-86 | 281 |
MsaG040789 | MtrunA17_Chr4g0077091 | 53.425 | 73 | 33 | 1 | 573 | 644 | 1 | 73 | 3.48e-20 | 85.1 |
MsaG040789 | MtrunA17_Chr8g0377481 | 33.562 | 146 | 84 | 4 | 511 | 644 | 826 | 970 | 9.98e-18 | 87.8 |
MsaG040789 | MtrunA17_Chr3g0122391 | 36.508 | 126 | 68 | 4 | 521 | 637 | 898 | 1020 | 1.43e-15 | 80.9 |
MsaG040789 | MtrunA17_Chr8g0371601 | 35.878 | 131 | 64 | 4 | 517 | 628 | 1024 | 1153 | 1.67e-13 | 74.3 |
MsaG040789 | MtrunA17_Chr5g0447641 | 34.127 | 126 | 58 | 4 | 524 | 627 | 1076 | 1198 | 2.99e-12 | 70.1 |
MsaG040789 | MtrunA17_Chr8g0392301 | 33.600 | 125 | 63 | 3 | 521 | 628 | 860 | 981 | 1.05e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040789 | AT3G04580.2 | 68.281 | 413 | 128 | 2 | 27 | 437 | 68 | 479 | 0.0 | 556 |
MsaG040789 | AT3G04580.2 | 58.911 | 202 | 77 | 1 | 451 | 646 | 565 | 766 | 3.69e-72 | 248 |
MsaG040789 | AT3G04580.1 | 68.281 | 413 | 128 | 2 | 27 | 437 | 68 | 479 | 0.0 | 556 |
MsaG040789 | AT3G04580.1 | 58.911 | 202 | 77 | 1 | 451 | 646 | 565 | 766 | 3.69e-72 | 248 |
MsaG040789 | AT3G23150.2 | 53.797 | 474 | 197 | 9 | 21 | 485 | 70 | 530 | 4.20e-152 | 453 |
MsaG040789 | AT3G23150.1 | 58.095 | 420 | 160 | 7 | 21 | 437 | 70 | 476 | 1.76e-149 | 452 |
MsaG040789 | AT3G23150.1 | 49.495 | 198 | 85 | 4 | 461 | 646 | 577 | 771 | 3.95e-50 | 187 |
MsaG040789 | AT1G04310.1 | 50.839 | 417 | 190 | 6 | 31 | 437 | 82 | 493 | 2.21e-128 | 393 |
MsaG040789 | AT1G04310.2 | 50.839 | 417 | 190 | 6 | 31 | 437 | 82 | 493 | 2.21e-128 | 393 |
MsaG040789 | AT1G66340.1 | 42.484 | 459 | 242 | 6 | 3 | 448 | 17 | 466 | 6.75e-105 | 335 |
MsaG040789 | AT1G66340.1 | 35.417 | 192 | 105 | 6 | 462 | 641 | 545 | 729 | 1.32e-24 | 109 |
MsaG040789 | AT2G40940.1 | 39.644 | 449 | 259 | 6 | 8 | 448 | 22 | 466 | 3.09e-89 | 290 |
MsaG040789 | AT5G35750.1 | 34.228 | 149 | 68 | 4 | 507 | 627 | 1013 | 1159 | 1.51e-13 | 74.7 |
MsaG040789 | AT2G01830.2 | 36.752 | 117 | 61 | 4 | 521 | 627 | 944 | 1057 | 2.42e-13 | 74.3 |
MsaG040789 | AT2G01830.1 | 36.752 | 117 | 61 | 4 | 521 | 627 | 921 | 1034 | 2.49e-13 | 73.9 |
MsaG040789 | AT2G01830.4 | 36.752 | 117 | 61 | 4 | 521 | 627 | 921 | 1034 | 2.49e-13 | 73.9 |
MsaG040789 | AT2G01830.6 | 36.752 | 117 | 61 | 4 | 521 | 627 | 921 | 1034 | 2.49e-13 | 73.9 |
MsaG040789 | AT2G01830.3 | 36.752 | 117 | 61 | 4 | 521 | 627 | 921 | 1034 | 2.49e-13 | 73.9 |
MsaG040789 | AT2G01830.5 | 36.752 | 117 | 61 | 4 | 521 | 627 | 933 | 1046 | 2.63e-13 | 73.9 |
MsaG040789 | AT1G27320.1 | 29.927 | 137 | 75 | 3 | 521 | 637 | 889 | 1024 | 2.81e-13 | 73.9 |
Find 159 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCAATGTTCCATTTAAAT+TGG | 0.194829 | 7:-103867864 | MsaT040789.1:CDS |
TGAAGGAATACCAATTTAAA+TGG | 0.204373 | 7:+103867854 | None:intergenic |
CTCTATTTCTGTAAATGATT+TGG | 0.214081 | 7:-103867378 | MsaT040789.1:CDS |
TTGGAGTGTACAAAGTATTT+TGG | 0.234119 | 7:-103867966 | MsaT040789.1:intron |
AAGTATAGGCATTGAGTAAA+TGG | 0.235188 | 7:+103867798 | None:intergenic |
ACCATTCAAAATCATCCTTT+TGG | 0.252407 | 7:-103865255 | MsaT040789.1:CDS |
CTCAATGCCTATACTTACTA+TGG | 0.275621 | 7:-103867791 | MsaT040789.1:CDS |
ACTTCAAAACCATCCATTTC+AGG | 0.281316 | 7:+103865221 | None:intergenic |
GGAAGTTCCAAAGCCGAAAT+TGG | 0.286448 | 7:-103865184 | MsaT040789.1:CDS |
CTACTAGCACTATTTAAAAT+TGG | 0.299995 | 7:+103866420 | None:intergenic |
ATCTTATGCTATACTAGTTT+TGG | 0.300114 | 7:-103867186 | MsaT040789.1:CDS |
CAAAGCCTTGAGTTCGATTT+CGG | 0.313490 | 7:+103867158 | None:intergenic |
CCGCGAGATTAGGAAGTCTT+TGG | 0.313919 | 7:-103867549 | MsaT040789.1:CDS |
TCAAAGGCCAATTTCGGCTT+TGG | 0.315320 | 7:+103865177 | None:intergenic |
GGAAATGTTTCAACTCTAAC+TGG | 0.322814 | 7:+103866769 | None:intergenic |
CTTCTTCTCAAGTTTCAATC+AGG | 0.328501 | 7:-103865473 | MsaT040789.1:CDS |
AAGTTTAATTTCCAGATAAC+TGG | 0.338812 | 7:-103866465 | MsaT040789.1:intron |
CGAAATCGAACTCAAGGCTT+TGG | 0.361339 | 7:-103867157 | MsaT040789.1:CDS |
TGTGCCAAACCCAGAGAGTT+TGG | 0.362144 | 7:+103865506 | None:intergenic |
AGGAGGCTAGTTGGCATGTT+AGG | 0.362594 | 7:-103867580 | MsaT040789.1:CDS |
CAATAATCAAAGGCCAATTT+CGG | 0.365522 | 7:+103865171 | None:intergenic |
CTGGATATCACCAAACTCTC+TGG | 0.365884 | 7:-103865516 | MsaT040789.1:CDS |
GGATCTTCAAATGCCTGAAA+TGG | 0.366381 | 7:-103865234 | MsaT040789.1:CDS |
TCATCACCTATTACCATATC+AGG | 0.368786 | 7:+103866651 | None:intergenic |
TGGAATTGGGGCAAGAGGTT+GGG | 0.375142 | 7:-103867619 | MsaT040789.1:CDS |
TTGGAATTGGGGCAAGAGGT+TGG | 0.382688 | 7:-103867620 | MsaT040789.1:CDS |
TAAGAAGCTGCTTGAGAAGC+TGG | 0.383208 | 7:-103865342 | MsaT040789.1:CDS |
GCAGAGATCCTTGCCTGATA+TGG | 0.386198 | 7:-103866664 | MsaT040789.1:intron |
GCTGCGAGTAGTGGTGAATC+TGG | 0.386274 | 7:-103867293 | MsaT040789.1:CDS |
GCAAAACCGGGCGTTGCAAC+AGG | 0.388211 | 7:-103867024 | MsaT040789.1:CDS |
GAAGCAGAATGTGTTGGAAT+TGG | 0.390130 | 7:-103867633 | MsaT040789.1:CDS |
AGAAACTTAAAGAGCAAAAC+CGG | 0.390137 | 7:-103867037 | MsaT040789.1:CDS |
CCCTCATCGTGGAATGTAGA+TGG | 0.392008 | 7:+103866748 | None:intergenic |
GAGACCTTTGCATTCAATCC+TGG | 0.400066 | 7:-103866931 | MsaT040789.1:CDS |
AAATGAGCTCCTTGCCTGGC+TGG | 0.400987 | 7:+103866980 | None:intergenic |
AAGCAGAATGTGTTGGAATT+GGG | 0.402075 | 7:-103867632 | MsaT040789.1:CDS |
AAGTGTTTGTGTGTGTATAA+AGG | 0.402755 | 7:-103866708 | MsaT040789.1:CDS |
TTAAAATTGGTCCATCTGAA+TGG | 0.402769 | 7:+103866433 | None:intergenic |
ATTATGCAACTCCAAGGCTT+TGG | 0.407308 | 7:+103867487 | None:intergenic |
GGATGTTGACCCGCGAGATT+AGG | 0.409855 | 7:-103867559 | MsaT040789.1:CDS |
CCTCCTTAGGTTCATTGTTG+TGG | 0.420175 | 7:+103866391 | None:intergenic |
GCAGCTCCGAGTGCAGAATC+AGG | 0.421232 | 7:+103867311 | None:intergenic |
CAAGTAACCGCTGTTTCATC+GGG | 0.427661 | 7:-103865314 | MsaT040789.1:CDS |
GCATGCAATGATGGCCAGCC+AGG | 0.428498 | 7:-103866994 | MsaT040789.1:CDS |
TGTTGAGCTTTCCAAAGCCT+TGG | 0.429033 | 7:-103867498 | MsaT040789.1:CDS |
AAGTGCAGAAGAACGCATAA+AGG | 0.432930 | 7:-103865138 | MsaT040789.1:CDS |
TGCCTACAGGTGGGAATGAA+TGG | 0.434232 | 7:-103865110 | MsaT040789.1:CDS |
AGATGATGGAAGGTAATATC+TGG | 0.435995 | 7:-103865535 | MsaT040789.1:CDS |
TCTCAAATGAGCTCCTTGCC+TGG | 0.436435 | 7:+103866976 | None:intergenic |
TTGTGTGTGTATAAAGGCTT+TGG | 0.437175 | 7:-103866702 | MsaT040789.1:CDS |
GGCACAAAAGCATGCAATGA+TGG | 0.437900 | 7:-103867003 | MsaT040789.1:CDS |
TCAAGTAACCGCTGTTTCAT+CGG | 0.439160 | 7:-103865315 | MsaT040789.1:CDS |
ATATCTGTTTATGGGATTGA+TGG | 0.441688 | 7:-103868031 | None:intergenic |
ATCACCAAACTCTCTGGGTT+TGG | 0.443024 | 7:-103865510 | MsaT040789.1:CDS |
CTGAAGCTTAGGCCCTCCTT+AGG | 0.443209 | 7:+103866378 | None:intergenic |
TAAAATTGGTCCATCTGAAT+GGG | 0.443946 | 7:+103866434 | None:intergenic |
AGTTGCATAATTGTGCGGTT+TGG | 0.452705 | 7:-103867475 | MsaT040789.1:CDS |
TCATGAGTTGAAGCCGAATC+CGG | 0.456399 | 7:-103867417 | MsaT040789.1:CDS |
CCACCATGAGATGGAGATAG+TGG | 0.458301 | 7:-103867132 | MsaT040789.1:CDS |
AGACCTTTGCATTCAATCCT+GGG | 0.459059 | 7:-103866930 | MsaT040789.1:CDS |
TTGAAGTTGCAAGGAAGATT+CGG | 0.459346 | 7:-103865205 | MsaT040789.1:CDS |
CCGATGATGATAATGTAAAC+AGG | 0.466113 | 7:-103865373 | MsaT040789.1:CDS |
GGATGCCTGATGAGGATAGA+AGG | 0.466923 | 7:-103867454 | MsaT040789.1:CDS |
CACTATCTCCATCTCATGGT+GGG | 0.473097 | 7:+103867133 | None:intergenic |
TTTCAAAAGAAGAGGAATCA+AGG | 0.474095 | 7:+103867679 | None:intergenic |
TTGAGGCCTGATTCTGCACT+CGG | 0.474787 | 7:-103867317 | MsaT040789.1:CDS |
CTGCGAGTAGTGGTGAATCT+GGG | 0.475786 | 7:-103867292 | MsaT040789.1:CDS |
CTGGAAACTTCCTTTGTCGT+TGG | 0.475889 | 7:+103866788 | None:intergenic |
GTTAGAGATAAGAAAGAGCA+AGG | 0.479184 | 7:-103867351 | MsaT040789.1:CDS |
CAGGCATTTGAAGATCCAAA+AGG | 0.486141 | 7:+103865240 | None:intergenic |
AACTCTCTGGGTTTGGCACA+AGG | 0.491639 | 7:-103865503 | MsaT040789.1:CDS |
ATCACCCTTCTATCCTCATC+AGG | 0.491816 | 7:+103867449 | None:intergenic |
TTTGTGCCTGTTGCAACGCC+CGG | 0.496643 | 7:+103867018 | None:intergenic |
AAATTTGAAACATGAAGTAT+CGG | 0.504455 | 7:+103867239 | None:intergenic |
TTCTTCCGAAATCGAACTCA+AGG | 0.505225 | 7:-103867163 | MsaT040789.1:CDS |
GCGTTTGATAAATGATGTAA+TGG | 0.505741 | 7:-103866820 | MsaT040789.1:CDS |
CTATGAAAGCAACAAATTGA+AGG | 0.510314 | 7:+103867837 | None:intergenic |
CGTTAAGACCTCTAAACTGT+TGG | 0.510727 | 7:+103865405 | None:intergenic |
GTTGCTTTCATAGTTCTATG+TGG | 0.512396 | 7:-103867827 | MsaT040789.1:CDS |
AGTATAGGCATTGAGTAAAT+GGG | 0.513040 | 7:+103867799 | None:intergenic |
ATGAGGGCCATAGTAAGTAT+AGG | 0.515615 | 7:+103867784 | None:intergenic |
TACCAATTTAAATGGAACAT+TGG | 0.516471 | 7:+103867862 | None:intergenic |
CCTGTTTACATTATCATCAT+CGG | 0.516759 | 7:+103865373 | None:intergenic |
AGAAACAATTGAAAGGAATG+AGG | 0.527304 | 7:+103867767 | None:intergenic |
GCTATCTCATGAAGGAGGAT+AGG | 0.531373 | 7:+103865074 | None:intergenic |
CATAAAGGAGAGATGCCTAC+AGG | 0.532003 | 7:-103865123 | MsaT040789.1:CDS |
CTTCAAATGCCTGAAATGGA+TGG | 0.537656 | 7:-103865230 | MsaT040789.1:CDS |
TTTCTTGAAGCAGAATGTGT+TGG | 0.539138 | 7:-103867639 | MsaT040789.1:CDS |
CATTTGCAAAACACTGGTGC+AGG | 0.542360 | 7:-103866355 | MsaT040789.1:intron |
CAATGATGGCCAGCCAGGCA+AGG | 0.543126 | 7:-103866989 | MsaT040789.1:CDS |
AGAAACAGAAGGAGGCTAGT+TGG | 0.551296 | 7:-103867589 | MsaT040789.1:CDS |
AAAAGAAGAGGAATCAAGGT+GGG | 0.554060 | 7:+103867683 | None:intergenic |
TTGCAGTGGCACATGAAACA+AGG | 0.555378 | 7:+103867714 | None:intergenic |
TTAGAGATAAGAAAGAGCAA+GGG | 0.559027 | 7:-103867350 | MsaT040789.1:CDS |
GCAAAGGTCTCCTCATTCCA+TGG | 0.564414 | 7:+103866943 | None:intergenic |
AAGTGATGAGCCATGGAATG+AGG | 0.565260 | 7:-103866953 | MsaT040789.1:CDS |
CCATCTACATTCCACGATGA+GGG | 0.566420 | 7:-103866748 | MsaT040789.1:CDS |
CCACAACAATGAACCTAAGG+AGG | 0.566649 | 7:-103866391 | MsaT040789.1:CDS |
ACGAATGGCTGCTACAGCAC+CGG | 0.566933 | 7:+103867265 | None:intergenic |
AGTTGCTGACCAGGTTGCTG+TGG | 0.568847 | 7:-103867105 | MsaT040789.1:CDS |
CCACTATCTCCATCTCATGG+TGG | 0.569247 | 7:+103867132 | None:intergenic |
TTTGCTTTCAATGTTTCAAG+AGG | 0.570011 | 7:-103866907 | MsaT040789.1:CDS |
AGTGGAGGTAGTTGCTGACC+AGG | 0.570687 | 7:-103867114 | MsaT040789.1:CDS |
TGGATATCACCAAACTCTCT+GGG | 0.571039 | 7:-103865515 | MsaT040789.1:CDS |
GAAACAATTGAAAGGAATGA+GGG | 0.573404 | 7:+103867768 | None:intergenic |
AAGAAGCTGCTTGAGAAGCT+GGG | 0.574319 | 7:-103865341 | MsaT040789.1:CDS |
AGAACAGTCCTGCTACGTGC+AGG | 0.575168 | 7:-103865041 | MsaT040789.1:CDS |
GCACCACAACAATGAACCTA+AGG | 0.576436 | 7:-103866394 | MsaT040789.1:CDS |
AGTGGTGAATCTGGGGACTC+CGG | 0.577575 | 7:-103867284 | MsaT040789.1:CDS |
ACCTATTACCATATCAGGCA+AGG | 0.579803 | 7:+103866656 | None:intergenic |
GAGAGATAGAAACAATTGAA+AGG | 0.580396 | 7:+103867760 | None:intergenic |
GCACTCGGAGCTGCGAGTAG+TGG | 0.580746 | 7:-103867302 | MsaT040789.1:CDS |
GAAATTTCAGCCAACGACAA+AGG | 0.583389 | 7:-103866798 | MsaT040789.1:CDS |
TTTGAGAAAGTGATGAGCCA+TGG | 0.585455 | 7:-103866960 | MsaT040789.1:CDS |
GCTTTGGACCCACCATGAGA+TGG | 0.587831 | 7:-103867141 | MsaT040789.1:CDS |
AGCAGAATGTGTTGGAATTG+GGG | 0.589243 | 7:-103867631 | MsaT040789.1:CDS |
TGTGTTGGAATTGGGGCAAG+AGG | 0.591001 | 7:-103867624 | MsaT040789.1:CDS |
TAGAGATAAGAAAGAGCAAG+GGG | 0.591331 | 7:-103867349 | MsaT040789.1:CDS |
CTTCAGCATTTGCAAAACAC+TGG | 0.591426 | 7:-103866361 | MsaT040789.1:CDS |
CAAAGACTTCCTAATCTCGC+GGG | 0.591973 | 7:+103867550 | None:intergenic |
ACTCTCTGGGTTTGGCACAA+GGG | 0.593543 | 7:-103865502 | MsaT040789.1:CDS |
TCCATCTACATTCCACGATG+AGG | 0.594668 | 7:-103866749 | MsaT040789.1:CDS |
ATGAAGTATCGGCATACGAA+TGG | 0.595708 | 7:+103867250 | None:intergenic |
TGGGATTATGAAGAAACAGA+AGG | 0.598480 | 7:-103867600 | MsaT040789.1:CDS |
TTTAATGTACAGATGATGGA+AGG | 0.599238 | 7:-103865545 | MsaT040789.1:intron |
CCAAAGACTTCCTAATCTCG+CGG | 0.601574 | 7:+103867549 | None:intergenic |
CTTGGAGTTGCATAATTGTG+CGG | 0.602360 | 7:-103867480 | MsaT040789.1:CDS |
TTTATACACACACAAACACT+TGG | 0.603367 | 7:+103866710 | None:intergenic |
GCTGTAAGAGCAATAATCAA+AGG | 0.605453 | 7:+103865161 | None:intergenic |
GGTACTAGTTCCCATTCAGA+TGG | 0.605734 | 7:-103866444 | MsaT040789.1:CDS |
GAGACAAGGCCACAGCAACC+TGG | 0.608666 | 7:+103867096 | None:intergenic |
GTTCGTTAGCTATCTCATGA+AGG | 0.613143 | 7:+103865066 | None:intergenic |
TGCAGTGGCACATGAAACAA+GGG | 0.615264 | 7:+103867715 | None:intergenic |
TGCGAGTAGTGGTGAATCTG+GGG | 0.617209 | 7:-103867291 | MsaT040789.1:CDS |
TAAGATGTCTCAACAAACTC+CGG | 0.617656 | 7:+103867203 | None:intergenic |
CCTCCACTATCTCCATCTCA+TGG | 0.620492 | 7:+103867129 | None:intergenic |
CGCACAATTATGCAACTCCA+AGG | 0.622141 | 7:+103867481 | None:intergenic |
AAAGGAGAGATGCCTACAGG+TGG | 0.625741 | 7:-103865120 | MsaT040789.1:CDS |
AAAGAAGAGGAATCAAGGTG+GGG | 0.631154 | 7:+103867684 | None:intergenic |
TTTCAATCAGGATCATCGCA+TGG | 0.633630 | 7:-103865461 | MsaT040789.1:CDS |
TGCGGTTTGGATGCCTGATG+AGG | 0.636065 | 7:-103867462 | MsaT040789.1:CDS |
AAGAACAGATGCATGAGACA+AGG | 0.644755 | 7:+103867082 | None:intergenic |
AAACCCAGGATTGAATGCAA+AGG | 0.645170 | 7:+103866927 | None:intergenic |
TTTGGAAAGCTCAACAAGTG+TGG | 0.647875 | 7:+103867505 | None:intergenic |
CGTTAGCTATCTCATGAAGG+AGG | 0.649779 | 7:+103865069 | None:intergenic |
GATGCCTGATGAGGATAGAA+GGG | 0.652796 | 7:-103867453 | MsaT040789.1:CDS |
GAAACATTGAAAGCAAACCC+AGG | 0.654290 | 7:+103866913 | None:intergenic |
ATCAAAACCCGATGAAACAG+CGG | 0.664158 | 7:+103865307 | None:intergenic |
AAGGAGAGATGCCTACAGGT+GGG | 0.666460 | 7:-103865119 | MsaT040789.1:CDS |
GCAAGAAGCTTCCCTCATCG+TGG | 0.667374 | 7:+103866737 | None:intergenic |
CACATGAAACAAGGGCAGTG+AGG | 0.669285 | 7:+103867723 | None:intergenic |
CACAACAATGAACCTAAGGA+GGG | 0.669995 | 7:-103866390 | MsaT040789.1:CDS |
AGAGATAAGAAAGAGCAAGG+GGG | 0.671908 | 7:-103867348 | MsaT040789.1:CDS |
CCATGAGATGGAGATAGTGG+AGG | 0.673370 | 7:-103867129 | MsaT040789.1:CDS |
GAAACTTAAAGAGCAAAACC+GGG | 0.674790 | 7:-103867036 | MsaT040789.1:CDS |
ATCCATTCATTCCCACCTGT+AGG | 0.679015 | 7:+103865108 | None:intergenic |
CAAAAGAAGAGGAATCAAGG+TGG | 0.682155 | 7:+103867682 | None:intergenic |
GGTGGGGAAAGTAATTGCAG+TGG | 0.686035 | 7:+103867700 | None:intergenic |
GATTATGAAGAAACAGAAGG+AGG | 0.703737 | 7:-103867597 | MsaT040789.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 103865028 | 103868043 | 103865028 | ID=MsaG040789 |
Chr7 | mRNA | 103865028 | 103868043 | 103865028 | ID=MsaT040789.1;Parent=MsaG040789 |
Chr7 | exon | 103865028 | 103865555 | 103865028 | ID=MsaT040789.1.exon4;Parent=MsaT040789.1 |
Chr7 | CDS | 103865028 | 103865555 | 103865028 | ID=cds.MsaT040789.1;Parent=MsaT040789.1 |
Chr7 | exon | 103866356 | 103866472 | 103866356 | ID=MsaT040789.1.exon3;Parent=MsaT040789.1 |
Chr7 | CDS | 103866356 | 103866472 | 103866356 | ID=cds.MsaT040789.1;Parent=MsaT040789.1 |
Chr7 | exon | 103866665 | 103867889 | 103866665 | ID=MsaT040789.1.exon2;Parent=MsaT040789.1 |
Chr7 | CDS | 103866665 | 103867889 | 103866665 | ID=cds.MsaT040789.1;Parent=MsaT040789.1 |
Chr7 | exon | 103867967 | 103868043 | 103867967 | ID=MsaT040789.1.exon1;Parent=MsaT040789.1 |
Chr7 | CDS | 103867967 | 103868043 | 103867967 | ID=cds.MsaT040789.1;Parent=MsaT040789.1 |
Gene Sequence |
Protein sequence |