Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040824 | XP_003626476.1 | 93.393 | 666 | 13 | 2 | 27 | 661 | 77 | 742 | 0.0 | 1264 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040824 | sp|Q9ZTP3|EIN4_ARATH | 59.531 | 682 | 225 | 6 | 27 | 661 | 68 | 745 | 0.0 | 785 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040824 | tr|G7L2X0|G7L2X0_MEDTR | 93.393 | 666 | 13 | 2 | 27 | 661 | 77 | 742 | 0.0 | 1264 |
Gene ID | Type | Classification |
---|---|---|
MsaG040824 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040824 | MtrunA17_Chr7g0274831 | 93.393 | 666 | 13 | 2 | 27 | 661 | 77 | 742 | 0.0 | 1264 |
MsaG040824 | MtrunA17_Chr1g0190021 | 69.254 | 670 | 169 | 6 | 28 | 661 | 71 | 739 | 0.0 | 910 |
MsaG040824 | MtrunA17_Chr1g0186431 | 55.752 | 678 | 258 | 7 | 21 | 661 | 66 | 738 | 0.0 | 749 |
MsaG040824 | MtrunA17_Chr1g0168161 | 51.026 | 682 | 288 | 9 | 21 | 661 | 65 | 741 | 0.0 | 682 |
MsaG040824 | MtrunA17_Chr4g0013831 | 37.360 | 712 | 378 | 14 | 3 | 660 | 18 | 715 | 3.29e-139 | 424 |
MsaG040824 | MtrunA17_Chr7g0269631 | 35.526 | 608 | 299 | 14 | 8 | 554 | 23 | 598 | 1.08e-91 | 297 |
MsaG040824 | MtrunA17_Chr8g0377481 | 35.714 | 126 | 68 | 4 | 547 | 660 | 826 | 950 | 1.03e-15 | 81.3 |
MsaG040824 | MtrunA17_Chr3g0122391 | 38.053 | 113 | 58 | 4 | 557 | 660 | 898 | 1007 | 9.17e-14 | 75.1 |
MsaG040824 | MtrunA17_Chr4g0077091 | 53.704 | 54 | 24 | 1 | 609 | 661 | 1 | 54 | 2.28e-12 | 62.8 |
MsaG040824 | MtrunA17_Chr8g0371601 | 34.646 | 127 | 63 | 4 | 553 | 660 | 1024 | 1149 | 1.45e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG040824 | AT3G04580.2 | 59.531 | 682 | 225 | 6 | 27 | 661 | 68 | 745 | 0.0 | 785 |
MsaG040824 | AT3G04580.1 | 59.531 | 682 | 225 | 6 | 27 | 661 | 68 | 745 | 0.0 | 785 |
MsaG040824 | AT3G23150.1 | 49.785 | 697 | 278 | 14 | 21 | 661 | 70 | 750 | 0.0 | 600 |
MsaG040824 | AT3G23150.2 | 58.531 | 422 | 159 | 7 | 21 | 439 | 70 | 478 | 2.94e-154 | 459 |
MsaG040824 | AT1G66340.1 | 37.500 | 712 | 375 | 15 | 3 | 660 | 17 | 712 | 8.10e-139 | 424 |
MsaG040824 | AT1G04310.1 | 43.510 | 547 | 257 | 8 | 31 | 535 | 82 | 618 | 3.96e-136 | 414 |
MsaG040824 | AT1G04310.2 | 43.510 | 547 | 257 | 8 | 31 | 535 | 82 | 618 | 3.96e-136 | 414 |
MsaG040824 | AT2G40940.1 | 36.000 | 575 | 321 | 12 | 8 | 541 | 22 | 590 | 1.14e-94 | 305 |
MsaG040824 | AT5G35750.1 | 33.562 | 146 | 67 | 4 | 543 | 660 | 1013 | 1156 | 3.55e-12 | 70.5 |
MsaG040824 | AT2G01830.2 | 35.965 | 114 | 60 | 4 | 557 | 660 | 944 | 1054 | 6.73e-12 | 69.7 |
MsaG040824 | AT2G01830.1 | 35.965 | 114 | 60 | 4 | 557 | 660 | 921 | 1031 | 6.85e-12 | 69.7 |
MsaG040824 | AT2G01830.4 | 35.965 | 114 | 60 | 4 | 557 | 660 | 921 | 1031 | 6.85e-12 | 69.7 |
MsaG040824 | AT2G01830.6 | 35.965 | 114 | 60 | 4 | 557 | 660 | 921 | 1031 | 6.85e-12 | 69.7 |
MsaG040824 | AT2G01830.3 | 35.965 | 114 | 60 | 4 | 557 | 660 | 921 | 1031 | 6.85e-12 | 69.7 |
MsaG040824 | AT2G01830.5 | 35.965 | 114 | 60 | 4 | 557 | 660 | 933 | 1043 | 7.12e-12 | 69.3 |
MsaG040824 | AT1G27320.1 | 30.645 | 124 | 65 | 3 | 557 | 660 | 889 | 1011 | 1.64e-11 | 68.2 |
MsaG040824 | AT1G27320.1 | 27.273 | 154 | 112 | 0 | 285 | 438 | 410 | 563 | 2.89e-11 | 67.4 |
Find 165 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCAATGTTCCATTTAAAT+TGG | 0.194829 | 7:-104207989 | MsaT040824.1:CDS |
TGAAGGAATACCAATTTAAA+TGG | 0.204373 | 7:+104207979 | None:intergenic |
CTCTATTTCTGTAAATGATT+TGG | 0.214081 | 7:-104207503 | MsaT040824.1:CDS |
TTGGAGTGTACAAAGTATTT+TGG | 0.234119 | 7:-104208091 | MsaT040824.1:intron |
AAGTATAGGCATTGAGTAAA+TGG | 0.235188 | 7:+104207923 | None:intergenic |
ACCATTCAAAATCATCCTTT+TGG | 0.252407 | 7:-104205377 | MsaT040824.1:CDS |
CTCAATGCCTATACTTACTA+TGG | 0.275621 | 7:-104207916 | MsaT040824.1:CDS |
ACTTCAAAACCATCCATTTC+AGG | 0.281316 | 7:+104205343 | None:intergenic |
GGAAGTTCCAAAGCCGAAAT+TGG | 0.286448 | 7:-104205306 | MsaT040824.1:CDS |
CTACTAGCACTATTTAAAAT+TGG | 0.299995 | 7:+104206542 | None:intergenic |
ATCTTATGCTATACTAGTTT+TGG | 0.300114 | 7:-104207311 | MsaT040824.1:CDS |
CAAAGCCTTGAGTTCGATTT+CGG | 0.313490 | 7:+104207283 | None:intergenic |
CCGCGAGATTAGGAAGTCTT+TGG | 0.313919 | 7:-104207674 | MsaT040824.1:CDS |
TCAAAGGCCAATTTCGGCTT+TGG | 0.315320 | 7:+104205299 | None:intergenic |
GGAAATGTTTCAACTCTAAC+TGG | 0.322814 | 7:+104206894 | None:intergenic |
CTTCTTCTCAAGTTTCAATC+AGG | 0.328501 | 7:-104205595 | MsaT040824.1:CDS |
GATAAGGATGATAGAAGTTC+TGG | 0.333479 | 7:-104206650 | MsaT040824.1:CDS |
AAGTTTAATTTCCAGATAAC+TGG | 0.338812 | 7:-104206587 | MsaT040824.1:CDS |
GGGAACTAGTACCAGTTATC+TGG | 0.355067 | 7:+104206576 | None:intergenic |
CGAAATCGAACTCAAGGCTT+TGG | 0.361339 | 7:-104207282 | MsaT040824.1:CDS |
TGTGCCAAACCCAGAGAGTT+TGG | 0.362144 | 7:+104205628 | None:intergenic |
AGGAGGCTAGTTGGCATGTT+AGG | 0.362594 | 7:-104207705 | MsaT040824.1:CDS |
CAATAATCAAAGGCCAATTT+CGG | 0.365522 | 7:+104205293 | None:intergenic |
CTGGATATCACCAAACTCTC+TGG | 0.365884 | 7:-104205638 | MsaT040824.1:CDS |
GGATCTTCAAATGCCTGAAA+TGG | 0.366381 | 7:-104205356 | MsaT040824.1:CDS |
TCATCACCTATTACCATATC+AGG | 0.368786 | 7:+104206776 | None:intergenic |
TGGAATTGGGGCAAGAGGTT+GGG | 0.375142 | 7:-104207744 | MsaT040824.1:CDS |
TTGGAATTGGGGCAAGAGGT+TGG | 0.382688 | 7:-104207745 | MsaT040824.1:CDS |
TAAGAAGCTGCTTGAGAAGC+TGG | 0.383208 | 7:-104205464 | MsaT040824.1:CDS |
GCAGAGATCCTTGCCTGATA+TGG | 0.386198 | 7:-104206789 | MsaT040824.1:CDS |
GCTGCGAGTAGTGGTGAATC+TGG | 0.386274 | 7:-104207418 | MsaT040824.1:CDS |
GCAAAACCGGGCGTTGCAAC+AGG | 0.388211 | 7:-104207149 | MsaT040824.1:CDS |
GAAGCAGAATGTGTTGGAAT+TGG | 0.390130 | 7:-104207758 | MsaT040824.1:CDS |
AGAAACTTAAAGAGCAAAAC+CGG | 0.390137 | 7:-104207162 | MsaT040824.1:CDS |
CCCTCATCGTGGAATGTAGA+TGG | 0.392008 | 7:+104206873 | None:intergenic |
GAGACCTTTGCATTCAATCC+TGG | 0.400066 | 7:-104207056 | MsaT040824.1:CDS |
AAATGAGCTCCTTGCCTGGC+TGG | 0.400987 | 7:+104207105 | None:intergenic |
AAGCAGAATGTGTTGGAATT+GGG | 0.402075 | 7:-104207757 | MsaT040824.1:CDS |
AAGTGTTTGTGTGTGTATAA+AGG | 0.402755 | 7:-104206833 | MsaT040824.1:CDS |
TTAAAATTGGTCCATCTGAA+TGG | 0.402769 | 7:+104206555 | None:intergenic |
TCCTTGCCTGATATGGTAAT+AGG | 0.403180 | 7:-104206782 | MsaT040824.1:CDS |
ATTATGCAACTCCAAGGCTT+TGG | 0.407308 | 7:+104207612 | None:intergenic |
GGATGTTGACCCGCGAGATT+AGG | 0.409855 | 7:-104207684 | MsaT040824.1:CDS |
CCTCCTTAGGTTCATTGTTG+TGG | 0.420175 | 7:+104206513 | None:intergenic |
GCAGCTCCGAGTGCAGAATC+AGG | 0.421232 | 7:+104207436 | None:intergenic |
CAAGTAACCGCTGTTTCATC+GGG | 0.427661 | 7:-104205436 | MsaT040824.1:CDS |
GCATGCAATGATGGCCAGCC+AGG | 0.428498 | 7:-104207119 | MsaT040824.1:CDS |
TGTTGAGCTTTCCAAAGCCT+TGG | 0.429033 | 7:-104207623 | MsaT040824.1:CDS |
AAGTGCAGAAGAACGCATAA+AGG | 0.432930 | 7:-104205260 | MsaT040824.1:CDS |
TGCCTACAGGTGGGAATGAA+TGG | 0.434232 | 7:-104205232 | MsaT040824.1:CDS |
AGATGATGGAAGGTAATATC+TGG | 0.435995 | 7:-104205657 | MsaT040824.1:CDS |
TCTCAAATGAGCTCCTTGCC+TGG | 0.436435 | 7:+104207101 | None:intergenic |
TTGTGTGTGTATAAAGGCTT+TGG | 0.437175 | 7:-104206827 | MsaT040824.1:CDS |
GGCACAAAAGCATGCAATGA+TGG | 0.437900 | 7:-104207128 | MsaT040824.1:CDS |
TCAAGTAACCGCTGTTTCAT+CGG | 0.439160 | 7:-104205437 | MsaT040824.1:CDS |
ATATCTGTTTATGGGATTGA+TGG | 0.441688 | 7:-104208156 | None:intergenic |
ATCACCAAACTCTCTGGGTT+TGG | 0.443024 | 7:-104205632 | MsaT040824.1:CDS |
CTGAAGCTTAGGCCCTCCTT+AGG | 0.443209 | 7:+104206500 | None:intergenic |
TAAAATTGGTCCATCTGAAT+GGG | 0.443946 | 7:+104206556 | None:intergenic |
AGTTGCATAATTGTGCGGTT+TGG | 0.452705 | 7:-104207600 | MsaT040824.1:CDS |
TCATGAGTTGAAGCCGAATC+CGG | 0.456399 | 7:-104207542 | MsaT040824.1:CDS |
CCACCATGAGATGGAGATAG+TGG | 0.458301 | 7:-104207257 | MsaT040824.1:CDS |
AGACCTTTGCATTCAATCCT+GGG | 0.459059 | 7:-104207055 | MsaT040824.1:CDS |
TTGAAGTTGCAAGGAAGATT+CGG | 0.459346 | 7:-104205327 | MsaT040824.1:CDS |
CCGATGATGATAATGTAAAC+AGG | 0.466113 | 7:-104205495 | MsaT040824.1:CDS |
GGATGCCTGATGAGGATAGA+AGG | 0.466923 | 7:-104207579 | MsaT040824.1:CDS |
CACTATCTCCATCTCATGGT+GGG | 0.473097 | 7:+104207258 | None:intergenic |
TTTCAAAAGAAGAGGAATCA+AGG | 0.474095 | 7:+104207804 | None:intergenic |
TTGAGGCCTGATTCTGCACT+CGG | 0.474787 | 7:-104207442 | MsaT040824.1:CDS |
CTGCGAGTAGTGGTGAATCT+GGG | 0.475786 | 7:-104207417 | MsaT040824.1:CDS |
CTGGAAACTTCCTTTGTCGT+TGG | 0.475889 | 7:+104206913 | None:intergenic |
GTTAGAGATAAGAAAGAGCA+AGG | 0.479184 | 7:-104207476 | MsaT040824.1:CDS |
TGAAAGTGATACCGCAGATA+AGG | 0.485783 | 7:-104206666 | MsaT040824.1:intron |
CAGGCATTTGAAGATCCAAA+AGG | 0.486141 | 7:+104205362 | None:intergenic |
AACTCTCTGGGTTTGGCACA+AGG | 0.491639 | 7:-104205625 | MsaT040824.1:CDS |
ATCACCCTTCTATCCTCATC+AGG | 0.491816 | 7:+104207574 | None:intergenic |
TTTGTGCCTGTTGCAACGCC+CGG | 0.496643 | 7:+104207143 | None:intergenic |
AAATTTGAAACATGAAGTAT+CGG | 0.504455 | 7:+104207364 | None:intergenic |
TTCTTCCGAAATCGAACTCA+AGG | 0.505225 | 7:-104207288 | MsaT040824.1:CDS |
GCGTTTGATAAATGATGTAA+TGG | 0.505741 | 7:-104206945 | MsaT040824.1:CDS |
CTATGAAAGCAACAAATTGA+AGG | 0.510314 | 7:+104207962 | None:intergenic |
CGTTAAGACCTCTAAACTGT+TGG | 0.510727 | 7:+104205527 | None:intergenic |
GTTGCTTTCATAGTTCTATG+TGG | 0.512396 | 7:-104207952 | MsaT040824.1:CDS |
AGTATAGGCATTGAGTAAAT+GGG | 0.513040 | 7:+104207924 | None:intergenic |
ATGAGGGCCATAGTAAGTAT+AGG | 0.515615 | 7:+104207909 | None:intergenic |
TACCAATTTAAATGGAACAT+TGG | 0.516471 | 7:+104207987 | None:intergenic |
CCTGTTTACATTATCATCAT+CGG | 0.516759 | 7:+104205495 | None:intergenic |
AGAAACAATTGAAAGGAATG+AGG | 0.527304 | 7:+104207892 | None:intergenic |
GCTATCTCATGAAGGAGGAT+AGG | 0.531373 | 7:+104205197 | None:intergenic |
CATAAAGGAGAGATGCCTAC+AGG | 0.532003 | 7:-104205245 | MsaT040824.1:CDS |
CTTCAAATGCCTGAAATGGA+TGG | 0.537656 | 7:-104205352 | MsaT040824.1:CDS |
TTTCTTGAAGCAGAATGTGT+TGG | 0.539138 | 7:-104207764 | MsaT040824.1:CDS |
CATTTGCAAAACACTGGTGC+AGG | 0.542360 | 7:-104206477 | MsaT040824.1:intron |
CAATGATGGCCAGCCAGGCA+AGG | 0.543126 | 7:-104207114 | MsaT040824.1:CDS |
AGAAACAGAAGGAGGCTAGT+TGG | 0.551296 | 7:-104207714 | MsaT040824.1:CDS |
AAAAGAAGAGGAATCAAGGT+GGG | 0.554060 | 7:+104207808 | None:intergenic |
TTGCAGTGGCACATGAAACA+AGG | 0.555378 | 7:+104207839 | None:intergenic |
TTAGAGATAAGAAAGAGCAA+GGG | 0.559027 | 7:-104207475 | MsaT040824.1:CDS |
GCAAAGGTCTCCTCATTCCA+TGG | 0.564414 | 7:+104207068 | None:intergenic |
AAGTGATGAGCCATGGAATG+AGG | 0.565260 | 7:-104207078 | MsaT040824.1:CDS |
CCATCTACATTCCACGATGA+GGG | 0.566420 | 7:-104206873 | MsaT040824.1:CDS |
CCACAACAATGAACCTAAGG+AGG | 0.566649 | 7:-104206513 | MsaT040824.1:CDS |
ACGAATGGCTGCTACAGCAC+CGG | 0.566933 | 7:+104207390 | None:intergenic |
AGTTGCTGACCAGGTTGCTG+TGG | 0.568847 | 7:-104207230 | MsaT040824.1:CDS |
CCACTATCTCCATCTCATGG+TGG | 0.569247 | 7:+104207257 | None:intergenic |
TTTGCTTTCAATGTTTCAAG+AGG | 0.570011 | 7:-104207032 | MsaT040824.1:CDS |
AGTGGAGGTAGTTGCTGACC+AGG | 0.570687 | 7:-104207239 | MsaT040824.1:CDS |
TGGATATCACCAAACTCTCT+GGG | 0.571039 | 7:-104205637 | MsaT040824.1:CDS |
GAAACAATTGAAAGGAATGA+GGG | 0.573404 | 7:+104207893 | None:intergenic |
AAGAAGCTGCTTGAGAAGCT+GGG | 0.574319 | 7:-104205463 | MsaT040824.1:CDS |
GCACCACAACAATGAACCTA+AGG | 0.576436 | 7:-104206516 | MsaT040824.1:CDS |
AGTGGTGAATCTGGGGACTC+CGG | 0.577575 | 7:-104207409 | MsaT040824.1:CDS |
ACCTATTACCATATCAGGCA+AGG | 0.579803 | 7:+104206781 | None:intergenic |
GAGAGATAGAAACAATTGAA+AGG | 0.580396 | 7:+104207885 | None:intergenic |
GCACTCGGAGCTGCGAGTAG+TGG | 0.580746 | 7:-104207427 | MsaT040824.1:CDS |
GAAATTTCAGCCAACGACAA+AGG | 0.583389 | 7:-104206923 | MsaT040824.1:CDS |
TTTGAGAAAGTGATGAGCCA+TGG | 0.585455 | 7:-104207085 | MsaT040824.1:CDS |
GCTTTGGACCCACCATGAGA+TGG | 0.587831 | 7:-104207266 | MsaT040824.1:CDS |
AGCAGAATGTGTTGGAATTG+GGG | 0.589243 | 7:-104207756 | MsaT040824.1:CDS |
TGTGTTGGAATTGGGGCAAG+AGG | 0.591001 | 7:-104207749 | MsaT040824.1:CDS |
TAGAGATAAGAAAGAGCAAG+GGG | 0.591331 | 7:-104207474 | MsaT040824.1:CDS |
CTTCAGCATTTGCAAAACAC+TGG | 0.591426 | 7:-104206483 | MsaT040824.1:CDS |
CAAAGACTTCCTAATCTCGC+GGG | 0.591973 | 7:+104207675 | None:intergenic |
GTTAGTTAGCTATCTCATGA+AGG | 0.592654 | 7:+104205189 | None:intergenic |
ACTCTCTGGGTTTGGCACAA+GGG | 0.593543 | 7:-104205624 | MsaT040824.1:CDS |
TCCATCTACATTCCACGATG+AGG | 0.594668 | 7:-104206874 | MsaT040824.1:CDS |
ATGAAGTATCGGCATACGAA+TGG | 0.595708 | 7:+104207375 | None:intergenic |
TGGGATTATGAAGAAACAGA+AGG | 0.598480 | 7:-104207725 | MsaT040824.1:CDS |
TTTAATGTACAGATGATGGA+AGG | 0.599238 | 7:-104205667 | MsaT040824.1:intron |
CCAAAGACTTCCTAATCTCG+CGG | 0.601574 | 7:+104207674 | None:intergenic |
CTTGGAGTTGCATAATTGTG+CGG | 0.602360 | 7:-104207605 | MsaT040824.1:CDS |
TTTATACACACACAAACACT+TGG | 0.603367 | 7:+104206835 | None:intergenic |
GCTGTAAGAGCAATAATCAA+AGG | 0.605453 | 7:+104205283 | None:intergenic |
GGTACTAGTTCCCATTCAGA+TGG | 0.605734 | 7:-104206566 | MsaT040824.1:CDS |
GAGACAAGGCCACAGCAACC+TGG | 0.608666 | 7:+104207221 | None:intergenic |
TGGTAATAGGTGATGAGGCA+AGG | 0.611503 | 7:-104206769 | MsaT040824.1:intron |
TGCAGTGGCACATGAAACAA+GGG | 0.615264 | 7:+104207840 | None:intergenic |
TGCGAGTAGTGGTGAATCTG+GGG | 0.617209 | 7:-104207416 | MsaT040824.1:CDS |
TAAGATGTCTCAACAAACTC+CGG | 0.617656 | 7:+104207328 | None:intergenic |
CCTCCACTATCTCCATCTCA+TGG | 0.620492 | 7:+104207254 | None:intergenic |
CGCACAATTATGCAACTCCA+AGG | 0.622141 | 7:+104207606 | None:intergenic |
AAAGGAGAGATGCCTACAGG+TGG | 0.625741 | 7:-104205242 | MsaT040824.1:CDS |
AAAGAAGAGGAATCAAGGTG+GGG | 0.631154 | 7:+104207809 | None:intergenic |
TTTCAATCAGGATCATCGCA+TGG | 0.633630 | 7:-104205583 | MsaT040824.1:CDS |
TGCGGTTTGGATGCCTGATG+AGG | 0.636065 | 7:-104207587 | MsaT040824.1:CDS |
AAGAACAGATGCATGAGACA+AGG | 0.644755 | 7:+104207207 | None:intergenic |
AAACCCAGGATTGAATGCAA+AGG | 0.645170 | 7:+104207052 | None:intergenic |
TTTGGAAAGCTCAACAAGTG+TGG | 0.647875 | 7:+104207630 | None:intergenic |
GATGCCTGATGAGGATAGAA+GGG | 0.652796 | 7:-104207578 | MsaT040824.1:CDS |
GAAACATTGAAAGCAAACCC+AGG | 0.654290 | 7:+104207038 | None:intergenic |
ATCAAAACCCGATGAAACAG+CGG | 0.664158 | 7:+104205429 | None:intergenic |
AAGGAGAGATGCCTACAGGT+GGG | 0.666460 | 7:-104205241 | MsaT040824.1:CDS |
GCAAGAAGCTTCCCTCATCG+TGG | 0.667374 | 7:+104206862 | None:intergenic |
TGATATGGTAATAGGTGATG+AGG | 0.667642 | 7:-104206774 | MsaT040824.1:CDS |
AGTTAGCTATCTCATGAAGG+AGG | 0.669102 | 7:+104205192 | None:intergenic |
CACATGAAACAAGGGCAGTG+AGG | 0.669285 | 7:+104207848 | None:intergenic |
CACAACAATGAACCTAAGGA+GGG | 0.669995 | 7:-104206512 | MsaT040824.1:CDS |
AGAGATAAGAAAGAGCAAGG+GGG | 0.671908 | 7:-104207473 | MsaT040824.1:CDS |
CCATGAGATGGAGATAGTGG+AGG | 0.673370 | 7:-104207254 | MsaT040824.1:CDS |
ACTTCTATCATCCTTATCTG+CGG | 0.674734 | 7:+104206655 | None:intergenic |
GAAACTTAAAGAGCAAAACC+GGG | 0.674790 | 7:-104207161 | MsaT040824.1:CDS |
ATCCATTCATTCCCACCTGT+AGG | 0.679015 | 7:+104205230 | None:intergenic |
CAAAAGAAGAGGAATCAAGG+TGG | 0.682155 | 7:+104207807 | None:intergenic |
GGTGGGGAAAGTAATTGCAG+TGG | 0.686035 | 7:+104207825 | None:intergenic |
GATTATGAAGAAACAGAAGG+AGG | 0.703737 | 7:-104207722 | MsaT040824.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 104205198 | 104208168 | 104205198 | ID=MsaG040824 |
Chr7 | mRNA | 104205198 | 104208168 | 104205198 | ID=MsaT040824.1;Parent=MsaG040824 |
Chr7 | exon | 104205198 | 104205677 | 104205198 | ID=MsaT040824.1.exon4;Parent=MsaT040824.1 |
Chr7 | CDS | 104205198 | 104205677 | 104205198 | ID=cds.MsaT040824.1;Parent=MsaT040824.1 |
Chr7 | exon | 104206478 | 104206682 | 104206478 | ID=MsaT040824.1.exon3;Parent=MsaT040824.1 |
Chr7 | CDS | 104206478 | 104206682 | 104206478 | ID=cds.MsaT040824.1;Parent=MsaT040824.1 |
Chr7 | exon | 104206770 | 104208014 | 104206770 | ID=MsaT040824.1.exon2;Parent=MsaT040824.1 |
Chr7 | CDS | 104206770 | 104208014 | 104206770 | ID=cds.MsaT040824.1;Parent=MsaT040824.1 |
Chr7 | exon | 104208092 | 104208168 | 104208092 | ID=MsaT040824.1.exon1;Parent=MsaT040824.1 |
Chr7 | CDS | 104208092 | 104208168 | 104208092 | ID=cds.MsaT040824.1;Parent=MsaT040824.1 |
Gene Sequence |
Protein sequence |