AlfalfaGEDB | MsaG040954

M. sativa ssp. caerulea / MsaG040954

KEGG: K12133 K12134
GO: GO:0000003 GO:0001067 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042752 GO:0042754 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043393 GO:0043433 GO:0043496 GO:0043565 GO:0044092 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051098 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG040954	XP_003626618.2	97.043	744	11	2	36	768	11	754	0.0	1491

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG040954	sp\|A0A0G3VTN5\|LHY_PETHY	49.481	770	337	18	38	767	12	769	5.27e-174	521

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG040954	tr\|G7L558\|G7L558_MEDTR	97.043	744	11	2	36	768	11	754	0.0	1491

TFs/TRs:

Gene ID	Type	Classification
MsaG040954	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000006	MsaG040954	0.829719	7.898356e-55	2.267508e-52
MsaG000115	MsaG040954	0.814845	2.164355e-51	4.167572e-49
MsaG000180	MsaG040954	0.841417	8.928627e-58	3.644677e-55
MsaG000250	MsaG040954	0.817164	6.609200e-52	1.350148e-49
MsaG000327	MsaG040954	0.847794	1.744705e-59	8.775172e-57
MsaG000352	MsaG040954	0.809102	3.809873e-50	6.366824e-48
MsaG000359	MsaG040954	0.809318	3.426551e-50	5.755622e-48
MsaG000368	MsaG040954	0.812754	6.220331e-51	1.136585e-48
MsaG000439	MsaG040954	0.864268	2.737901e-64	2.512248e-61
MsaG000514	MsaG040954	0.809149	3.722484e-50	6.227781e-48
MsaG000722	MsaG040954	0.830066	6.505364e-55	1.886277e-52
MsaG000941	MsaG040954	0.800323	2.542671e-48	3.462981e-46
MsaG001001	MsaG040954	0.805703	1.987910e-49	3.063491e-47
MsaG001366	MsaG040954	0.818717	2.957206e-52	6.288036e-50
MsaG001660	MsaG040954	0.803338	6.154168e-49	8.977431e-47
MsaG002021	MsaG040954	0.824457	1.414943e-53	3.506926e-51
MsaG002350	MsaG040954	0.810885	1.580237e-50	2.757452e-48
MsaG002828	MsaG040954	0.803350	6.120674e-49	8.931054e-47
MsaG003327	MsaG040954	0.855040	1.592483e-61	1.030220e-58
MsaG003423	MsaG040954	0.836413	1.736718e-56	6.069502e-54
MsaG003461	MsaG040954	0.814322	2.822952e-51	5.364550e-49
MsaG003529	MsaG040954	0.800143	2.765483e-48	3.751102e-46
MsaG003536	MsaG040954	0.804664	3.271766e-49	4.921534e-47
MsaG003632	MsaG040954	0.802801	7.935942e-49	1.143411e-46
MsaG003679	MsaG040954	0.849747	5.040922e-60	2.708719e-57
MsaG003680	MsaG040954	0.838910	3.998742e-57	1.508730e-54
MsaG003998	MsaG040954	0.841179	1.030381e-57	4.174551e-55
MsaG003964	MsaG040954	0.814102	3.154976e-51	5.962637e-49
MsaG004041	MsaG040954	0.809910	2.560299e-50	4.362779e-48
MsaG004229	MsaG040954	0.815124	1.878597e-51	3.642702e-49
MsaG004185	MsaG040954	0.866561	5.233682e-65	5.264845e-62
MsaG004290	MsaG040954	0.814047	3.243838e-51	6.121942e-49
MsaG004648	MsaG040954	0.811459	1.188323e-50	2.102961e-48
MsaG004684	MsaG040954	0.829208	1.049808e-54	2.969799e-52
MsaG005331	MsaG040954	0.850975	2.289125e-60	1.283065e-57
MsaG005354	MsaG040954	0.878733	4.644895e-69	7.907427e-66
MsaG005760	MsaG040954	0.811179	1.365730e-50	2.400367e-48
MsaG005770	MsaG040954	0.873462	2.971467e-67	3.994104e-64
MsaG005812	MsaG040954	0.803590	5.460787e-49	8.012478e-47
MsaG006217	MsaG040954	0.835966	2.253098e-56	7.768475e-54
MsaG006221	MsaG040954	0.854322	2.564966e-61	1.617535e-58
MsaG006339	MsaG040954	0.861331	2.181931e-63	1.784640e-60
MsaG006387	MsaG040954	0.836315	1.839203e-56	6.408597e-54
MsaG006430	MsaG040954	0.846970	2.930342e-59	1.433504e-56
MsaG006440	MsaG040954	0.807431	8.617336e-50	1.383330e-47
MsaG006558	MsaG040954	0.814029	3.273300e-51	6.174833e-49
MsaG006741	MsaG040954	0.803287	6.305232e-49	9.187056e-47
MsaG006801	MsaG040954	0.840404	1.641785e-57	6.490890e-55
MsaG006889	MsaG040954	0.814667	2.370096e-51	4.543127e-49
MsaG006988	MsaG040954	0.831335	3.191627e-55	9.597438e-53
MsaG007205	MsaG040954	0.816345	1.006760e-51	2.013746e-49
MsaG007543	MsaG040954	0.811422	1.210438e-50	2.140135e-48
MsaG007568	MsaG040954	0.811559	1.130804e-50	2.006056e-48
MsaG007600	MsaG040954	0.880195	1.415290e-69	2.577579e-66
MsaG007626	MsaG040954	0.808944	4.117787e-50	6.855152e-48
MsaG007684	MsaG040954	0.847127	2.655074e-59	1.305676e-56
MsaG007861	MsaG040954	0.801055	1.805825e-48	2.500337e-46
MsaG008069	MsaG040954	0.893711	1.088753e-74	3.910049e-71
MsaG008088	MsaG040954	0.846382	4.233637e-59	2.030692e-56
MsaG008250	MsaG040954	0.813424	4.441484e-51	8.252684e-49
MsaG008246	MsaG040954	0.836966	1.257176e-56	4.467125e-54
MsaG008480	MsaG040954	0.802587	8.783647e-49	1.259399e-46
MsaG008522	MsaG040954	0.801891	1.219798e-48	1.721348e-46
MsaG008604	MsaG040954	0.826562	4.512461e-54	1.185310e-51
MsaG009007	MsaG040954	0.819346	2.131147e-52	4.607229e-50
MsaG009206	MsaG040954	0.819013	2.536026e-52	5.434394e-50
MsaG009392	MsaG040954	0.801382	1.549089e-48	2.160875e-46
MsaG009456	MsaG040954	0.807791	7.231799e-50	1.170995e-47
MsaG009785	MsaG040954	0.804877	2.954203e-49	4.466056e-47
MsaG009787	MsaG040954	0.886435	7.428781e-72	1.826067e-68
MsaG010328	MsaG040954	0.824925	1.099223e-53	2.759466e-51
MsaG010642	MsaG040954	0.800423	2.427170e-48	3.313192e-46
MsaG011044	MsaG040954	0.814836	2.174210e-51	4.185630e-49
MsaG011237	MsaG040954	0.813296	4.738218e-51	8.775278e-49
MsaG011256	MsaG040954	0.800409	2.443142e-48	3.333955e-46
MsaG011383	MsaG040954	0.819859	1.629140e-52	3.569575e-50
MsaG011605	MsaG040954	0.825109	9.950708e-54	2.510588e-51
MsaG011952	MsaG040954	0.801139	1.735871e-48	2.408129e-46
MsaG012204	MsaG040954	0.834177	6.332926e-56	2.069653e-53
MsaG012586	MsaG040954	0.822573	3.884834e-53	9.148875e-51
MsaG012591	MsaG040954	0.810321	2.089326e-50	3.596107e-48
MsaG012633	MsaG040954	0.829581	8.529861e-55	2.439217e-52
MsaG012671	MsaG040954	0.814337	2.801121e-51	5.325185e-49
MsaG012704	MsaG040954	0.844508	1.354817e-58	6.108020e-56
MsaG013849	MsaG040954	0.821363	7.383473e-53	1.683506e-50
MsaG014543	MsaG040954	0.802407	9.563695e-49	1.365604e-46
MsaG014544	MsaG040954	0.830221	5.966568e-55	1.737702e-52
MsaG014725	MsaG040954	0.808795	4.428034e-50	7.345303e-48
MsaG015318	MsaG040954	0.854135	2.901865e-61	1.817758e-58
MsaG016058	MsaG040954	0.811541	1.140921e-50	2.023113e-48
MsaG017088	MsaG040954	0.850924	2.365925e-60	1.323808e-57
MsaG017170	MsaG040954	0.853889	3.415166e-61	2.120520e-58
MsaG017376	MsaG040954	0.845989	5.411692e-59	2.562110e-56
MsaG017473	MsaG040954	0.864746	1.944370e-64	1.818371e-61
MsaG017480	MsaG040954	0.852713	7.392866e-61	4.403325e-58
MsaG017588	MsaG040954	0.836157	2.015447e-56	6.989544e-54
MsaG017689	MsaG040954	0.802073	1.119241e-48	1.585975e-46
MsaG017690	MsaG040954	0.815806	1.326658e-51	2.617417e-49
MsaG018367	MsaG040954	0.843238	2.953835e-58	1.278086e-55
MsaG018626	MsaG040954	0.812904	5.770797e-51	1.058375e-48
MsaG018848	MsaG040954	0.807877	6.936427e-50	1.125506e-47
MsaG019007	MsaG040954	0.871892	9.892881e-67	1.242722e-63
MsaG019091	MsaG040954	0.815340	1.683020e-51	3.281525e-49
MsaG019132	MsaG040954	0.818436	3.422307e-52	7.223977e-50
MsaG019221	MsaG040954	0.805174	2.563000e-49	3.901447e-47
MsaG019297	MsaG040954	0.834870	4.250918e-56	1.418376e-53
MsaG019795	MsaG040954	0.810226	2.190083e-50	3.760678e-48
MsaG019814	MsaG040954	0.898849	8.105971e-77	3.877103e-73
MsaG020062	MsaG040954	0.824872	1.130799e-53	2.834589e-51
MsaG020296	MsaG040954	0.819931	1.569201e-52	3.444892e-50
MsaG020338	MsaG040954	0.813166	5.059233e-51	9.339690e-49
MsaG020402	MsaG040954	0.817130	6.727695e-52	1.373127e-49
MsaG020421	MsaG040954	0.812933	5.686280e-51	1.043636e-48
MsaG020718	MsaG040954	0.816602	8.824917e-52	1.776779e-49
MsaG020787	MsaG040954	0.843486	2.538381e-58	1.107129e-55
MsaG020810	MsaG040954	0.817537	5.452337e-52	1.124519e-49
MsaG020889	MsaG040954	0.803383	6.024923e-49	8.798150e-47
MsaG021106	MsaG040954	0.808831	4.351096e-50	7.223987e-48
MsaG022116	MsaG040954	0.842652	4.223605e-58	1.793575e-55
MsaG022437	MsaG040954	0.826424	4.865690e-54	1.273253e-51
MsaG022503	MsaG040954	0.852437	8.853930e-61	5.222771e-58
MsaG022737	MsaG040954	0.807694	7.584131e-50	1.225164e-47
MsaG023304	MsaG040954	0.828316	1.720940e-54	4.748101e-52
MsaG023396	MsaG040954	0.842330	5.136583e-58	2.158736e-55
MsaG024036	MsaG040954	0.813417	4.457373e-51	8.280625e-49
MsaG025722	MsaG040954	0.809521	3.100810e-50	5.234583e-48
MsaG026962	MsaG040954	0.800769	2.065102e-48	2.841078e-46
MsaG027087	MsaG040954	0.832863	1.343047e-55	4.222539e-53
MsaG027383	MsaG040954	0.822098	5.002390e-53	1.163103e-50
MsaG027775	MsaG040954	0.818218	3.833110e-52	8.045776e-50
MsaG027749	MsaG040954	0.841543	8.272361e-58	3.390322e-55
MsaG027992	MsaG040954	0.830944	3.977285e-55	1.182575e-52
MsaG028040	MsaG040954	0.834079	6.700919e-56	2.183455e-53
MsaG028105	MsaG040954	0.826306	5.191660e-54	1.354031e-51
MsaG028256	MsaG040954	0.867156	3.388950e-65	3.492574e-62
MsaG028250	MsaG040954	0.813624	4.015905e-51	7.499267e-49
MsaG028292	MsaG040954	0.808295	5.657374e-50	9.272036e-48
MsaG028350	MsaG040954	0.820497	1.165836e-52	2.598030e-50
MsaG028568	MsaG040954	0.824481	1.396543e-53	3.463574e-51
MsaG028634	MsaG040954	0.818716	2.959172e-52	6.292003e-50
MsaG028825	MsaG040954	0.824870	1.132362e-53	2.838315e-51
MsaG028916	MsaG040954	0.823731	2.090588e-53	5.080407e-51
MsaG029132	MsaG040954	0.806909	1.110449e-49	1.760608e-47
MsaG029245	MsaG040954	0.831900	2.320202e-55	7.093763e-53
MsaG029273	MsaG040954	0.877090	1.732878e-68	2.736341e-65
MsaG029345	MsaG040954	0.838152	6.264101e-57	2.308178e-54
MsaG029459	MsaG040954	0.867031	3.713928e-65	3.808504e-62
MsaG029482	MsaG040954	0.814776	2.241533e-51	4.308766e-49
MsaG029624	MsaG040954	0.826150	5.652196e-54	1.467840e-51
MsaG029694	MsaG040954	0.846432	4.103853e-59	1.971589e-56
MsaG029719	MsaG040954	0.846077	5.122400e-59	2.432232e-56
MsaG029989	MsaG040954	0.809449	3.211888e-50	5.412751e-48
MsaG030045	MsaG040954	0.804727	3.175246e-49	4.783358e-47
MsaG030158	MsaG040954	0.851532	1.596268e-60	9.120708e-58
MsaG030510	MsaG040954	0.841580	8.089316e-58	3.319272e-55
MsaG030602	MsaG040954	0.804263	3.962848e-49	5.906195e-47
MsaG031328	MsaG040954	0.835574	2.829190e-56	9.640670e-54
MsaG032046	MsaG040954	0.811629	1.091907e-50	1.940364e-48
MsaG033863	MsaG040954	0.850218	3.725899e-60	2.034259e-57
MsaG034204	MsaG040954	0.809240	3.560301e-50	5.969174e-48
MsaG034133	MsaG040954	0.800644	2.188848e-48	3.002902e-46
MsaG035255	MsaG040954	0.821334	7.499078e-53	1.708553e-50
MsaG035675	MsaG040954	0.825019	1.044421e-53	2.628666e-51
MsaG035749	MsaG040954	0.806212	1.554967e-49	2.425373e-47
MsaG036241	MsaG040954	0.817275	6.240972e-52	1.278598e-49
MsaG036620	MsaG040954	0.814889	2.117115e-51	4.081096e-49
MsaG038011	MsaG040954	0.860666	3.469332e-63	2.767161e-60
MsaG039166	MsaG040954	0.878859	4.193859e-69	7.181712e-66
MsaG039490	MsaG040954	0.816288	1.036632e-51	2.070485e-49
MsaG039946	MsaG040954	0.850563	2.984605e-60	1.649279e-57
MsaG040417	MsaG040954	0.804139	4.204150e-49	6.247807e-47
MsaG040474	MsaG040954	0.809386	3.314380e-50	5.576535e-48
MsaG040583	MsaG040954	0.813137	5.131240e-51	9.465895e-49
MsaG040853	MsaG040954	0.849664	5.315714e-60	2.848372e-57
MsaG040954	MsaG041463	0.856903	4.564712e-62	3.160457e-59
MsaG040954	MsaG042142	0.832216	1.939087e-55	5.982795e-53
MsaG040954	MsaG042566	0.830850	4.194332e-55	1.243742e-52
MsaG040954	MsaG042898	0.831645	2.678796e-55	8.129466e-53
MsaG040954	MsaG043021	0.803540	5.591632e-49	8.195206e-47
MsaG040954	MsaG043225	0.846348	4.325857e-59	2.072649e-56
MsaG040954	MsaG043571	0.827591	2.567622e-54	6.941406e-52
MsaG040954	MsaG044092	0.827652	2.482436e-54	6.722551e-52
MsaG040954	MsaG044333	0.806559	1.315487e-49	2.068666e-47
MsaG040954	MsaG044501	0.836008	2.198546e-56	7.590052e-54
MsaG040954	MsaG044614	0.842316	5.180598e-58	2.176209e-55
MsaG040954	MsaG044880	0.840985	1.158144e-57	4.663203e-55
MsaG040954	MsaG044934	0.815586	1.484185e-51	2.911936e-49
MsaG040954	MsaG045016	0.863278	5.541551e-64	4.889468e-61
MsaG040954	MsaG045118	0.836225	1.937546e-56	6.733013e-54
MsaG040954	MsaG045461	0.827904	2.161122e-54	5.893984e-52
MsaG040954	MsaG045566	0.846631	3.622899e-59	1.752150e-56
MsaG040954	MsaG045590	0.847370	2.279310e-59	1.130050e-56
MsaG040954	MsaG045703	0.833108	1.167854e-55	3.698575e-53
MsaG040954	MsaG045873	0.802908	7.547490e-49	1.090109e-46
MsaG040954	MsaG045974	0.832589	1.569038e-55	4.893764e-53
MsaG040954	MsaG046107	0.833664	8.501447e-56	2.736696e-53
MsaG040954	MsaG046247	0.845262	8.501956e-59	3.929175e-56
MsaG040954	MsaG046268	0.818629	3.095920e-52	6.568010e-50
MsaG040954	MsaG046445	0.810129	2.297682e-50	3.936040e-48
MsaG040954	MsaG046554	0.806639	1.265261e-49	1.993461e-47
MsaG040954	MsaG046750	0.835614	2.762914e-56	9.426578e-54
MsaG040954	MsaG046926	0.819940	1.561864e-52	3.429614e-50
MsaG040954	MsaG046930	0.869099	8.083598e-66	9.020865e-63
MsaG040954	MsaG001564	0.811744	1.031091e-50	1.837488e-48
MsaG040954	MsaG001077	0.808679	4.687485e-50	7.754193e-48
MsaG040954	MsaG002466	0.818895	2.696149e-52	5.759641e-50
MsaG040954	MsaG002984	0.804683	3.241915e-49	4.878853e-47
MsaG040954	MsaG001460	0.804759	3.127091e-49	4.714366e-47
MsaG040954	MsaG002582	0.805512	2.178471e-49	3.342117e-47
MsaG040954	MsaG002307	0.888545	1.173125e-72	3.206415e-69
MsaG040954	MsaG008854	0.816200	1.084768e-51	2.161727e-49
MsaG040954	MsaG009209	0.802283	1.013967e-48	1.443703e-46
MsaG040954	MsaG008207	0.844890	1.070194e-58	4.886851e-56
MsaG040954	MsaG006858	0.879807	1.943277e-69	3.476294e-66
MsaG040954	MsaG007673	0.818260	3.750209e-52	7.880090e-50
MsaG040954	MsaG009163	0.823946	1.862975e-53	4.553502e-51
MsaG040954	MsaG006602	0.828841	1.286830e-54	3.602908e-52
MsaG040954	MsaG012932	0.838852	4.140526e-57	1.559401e-54
MsaG040954	MsaG014863	0.803768	5.017300e-49	7.392317e-47
MsaG040954	MsaG013008	0.805347	2.357953e-49	3.603782e-47
MsaG040954	MsaG012029	0.803724	5.123355e-49	7.540944e-47
MsaG040954	MsaG012156	0.882529	2.056635e-70	4.179806e-67
MsaG040954	MsaG011633	0.808673	4.702072e-50	7.777208e-48
MsaG040954	MsaG013071	0.868415	1.343046e-65	1.457331e-62
MsaG040954	MsaG027945	0.828559	1.504728e-54	4.179965e-52
MsaG040954	MsaG029782	0.849853	4.709994e-60	2.539807e-57
MsaG040954	MsaG029395	0.836604	1.553010e-56	5.458546e-54
MsaG040954	MsaG025855	0.883246	1.128132e-70	2.373641e-67
MsaG040954	MsaG026793	0.806635	1.267609e-49	1.996994e-47
MsaG040954	MsaG028076	0.830074	6.477548e-55	1.878624e-52
MsaG040954	MsaG027453	0.808473	5.183815e-50	8.532590e-48
MsaG040954	MsaG032663	0.820996	8.961179e-53	2.023604e-50
MsaG040954	MsaG034613	0.800040	2.902151e-48	3.927389e-46
MsaG040954	MsaG033233	0.803360	6.091053e-49	8.889963e-47
MsaG040954	MsaG030688	0.804706	3.206449e-49	4.828020e-47
MsaG040954	MsaG031905	0.809486	3.155223e-50	5.322018e-48
MsaG040954	MsaG031428	0.806934	1.096785e-49	1.739974e-47
MsaG040954	MsaG030748	0.831893	2.328602e-55	7.118108e-53
MsaG040954	MsaG031188	0.830750	4.435420e-55	1.311454e-52
MsaG040954	MsaG031808	0.801456	1.496133e-48	2.090521e-46
MsaG040954	MsaG033504	0.848926	8.515246e-60	4.449070e-57
MsaG040954	MsaG033058	0.820203	1.360475e-52	3.008464e-50
MsaG040954	MsaG030000	0.827095	3.371037e-54	8.987511e-52
MsaG040954	MsaG037322	0.845171	8.993485e-59	4.143972e-56
MsaG040954	MsaG036358	0.812951	5.635434e-51	1.034771e-48
MsaG040954	MsaG040619	0.801205	1.683655e-48	2.339087e-46
MsaG040954	MsaG036457	0.821559	6.658030e-53	1.526001e-50
MsaG040954	MsaG035918	0.831110	3.622540e-55	1.082264e-52
MsaG040954	MsaG039091	0.810065	2.371302e-50	4.055908e-48
MsaG040954	MsaG038223	0.812181	8.290163e-51	1.493322e-48
MsaG040954	MsaG042416	0.809457	3.199801e-50	5.393416e-48
MsaG040954	MsaG041479	0.800354	2.506583e-48	3.416247e-46
MsaG040954	MsaG042304	0.814228	2.959427e-51	5.610907e-49
MsaG040954	MsaG041446	0.832749	1.432835e-55	4.490037e-53
MsaG040954	MsaG042303	0.808830	4.353821e-50	7.228234e-48
MsaG040954	MsaG047040	0.860623	3.572462e-63	2.844823e-60

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG040954	MtrunA17_Chr7g0276421	97.043	744	11	2	36	768	11	754	0.0	1491
MsaG040954	MtrunA17_Chr3g0109791	64.815	108	33	3	34	138	40	145	1.75e-30	123
MsaG040954	MtrunA17_Chr5g0433851	72.043	93	24	1	41	133	34	124	6.17e-30	123
MsaG040954	MtrunA17_Chr6g0469431	46.457	127	50	3	23	141	15	131	1.78e-29	117
MsaG040954	MtrunA17_Chr1g0181771	51.961	102	37	2	40	139	37	128	3.39e-29	118
MsaG040954	MtrunA17_Chr8g0348391	53.000	100	37	1	41	140	55	144	8.17e-29	118
MsaG040954	MtrunA17_Chr6g0481061	71.579	95	25	1	40	134	47	139	1.01e-28	120

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG040954	AT1G01060.4	44.430	754	267	23	41	767	15	643	4.51e-122	380
MsaG040954	AT1G01060.8	44.503	755	266	24	41	767	15	644	4.89e-122	380
MsaG040954	AT1G01060.2	44.503	755	266	24	41	767	15	644	4.89e-122	380
MsaG040954	AT1G01060.3	44.503	755	266	24	41	767	15	644	4.89e-122	380
MsaG040954	AT1G01060.1	44.503	755	266	24	41	767	15	644	4.89e-122	380
MsaG040954	AT1G01060.7	44.503	755	266	24	41	767	15	644	4.89e-122	380
MsaG040954	AT2G46830.1	37.500	752	289	30	36	763	9	603	5.18e-82	274
MsaG040954	AT1G01060.6	40.254	708	270	24	88	767	60	642	6.59e-78	264
MsaG040954	AT1G01060.5	40.254	708	270	24	88	767	60	642	6.59e-78	264
MsaG040954	AT2G46830.3	39.901	406	182	17	374	763	162	521	2.06e-44	168
MsaG040954	AT2G46830.2	39.901	406	182	17	374	763	162	521	2.06e-44	168
MsaG040954	AT5G17300.1	68.932	103	29	2	32	133	36	136	4.96e-32	129
MsaG040954	AT5G37260.1	66.000	100	28	1	37	136	23	116	8.58e-32	125
MsaG040954	AT1G18330.1	56.489	131	50	2	36	161	36	164	1.73e-31	126
MsaG040954	AT3G10113.1	56.489	131	50	2	36	161	51	179	2.77e-31	125
MsaG040954	AT1G18330.2	56.489	131	50	2	36	161	62	190	5.46e-31	125
MsaG040954	AT3G09600.1	49.091	110	44	2	24	133	19	116	6.16e-29	118
MsaG040954	AT3G09600.7	49.091	110	44	2	24	133	19	116	6.16e-29	118
MsaG040954	AT3G09600.4	53.191	94	34	1	40	133	33	116	6.79e-29	117
MsaG040954	AT3G09600.2	49.091	110	44	2	24	133	19	116	7.14e-29	117
MsaG040954	AT3G09600.6	49.091	110	44	2	24	133	19	116	7.14e-29	117
MsaG040954	AT5G02840.4	52.128	94	35	1	40	133	38	121	1.40e-27	113
MsaG040954	AT5G52660.2	55.789	95	32	2	41	135	63	147	1.55e-27	114
MsaG040954	AT5G52660.1	55.789	95	32	2	41	135	63	147	1.57e-27	114
MsaG040954	AT5G02840.3	52.128	94	35	1	40	133	38	121	1.66e-27	113
MsaG040954	AT5G02840.1	52.128	94	35	1	40	133	38	121	1.70e-27	113
MsaG040954	AT5G02840.2	52.128	94	35	1	40	133	38	121	1.70e-27	113
MsaG040954	AT5G02840.5	52.128	94	35	1	40	133	38	121	1.95e-27	113
MsaG040954	AT4G01280.2	54.206	107	37	3	41	145	50	146	2.36e-27	113
MsaG040954	AT4G01280.1	54.206	107	37	3	41	145	50	146	2.49e-27	113
MsaG040954	AT1G01520.2	52.128	94	35	1	40	133	51	134	1.50e-26	110
MsaG040954	AT1G01520.4	52.128	94	35	1	40	133	51	134	1.50e-26	110
MsaG040954	AT1G01520.1	38.202	178	75	6	40	193	51	217	1.55e-26	110
MsaG040954	AT1G01520.3	38.202	178	75	6	40	193	51	217	1.75e-26	110
MsaG040954	AT3G09600.3	45.455	66	26	1	68	133	5	60	1.32e-13	71.6
MsaG040954	AT3G09600.8	45.455	66	26	1	68	133	5	60	1.32e-13	71.6
MsaG040954	AT3G09600.5	45.455	66	26	1	68	133	5	60	1.34e-13	71.2
MsaG040954	AT3G09600.9	45.455	66	26	1	68	133	5	60	1.34e-13	71.2

Find 178 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAGGGACGACTTGCCTTTC+GGG	0.205941	7:+105521702	MsaT040954.1:intron
TTCTCGGATTGAACCGATTT+CGG	0.267063	7:-105520515	None:intergenic
TCCTCATGATTTGATAAATA+AGG	0.270829	7:+105521765	MsaT040954.1:CDS
GCTTTGCAAGCTCAACATTC+AGG	0.271530	7:+105521262	MsaT040954.1:CDS
TTAGCAACCTTCTTGATTCT+TGG	0.278037	7:+105521581	MsaT040954.1:CDS
TACAGGGACGACTTGCCTTT+CGG	0.283902	7:+105521701	MsaT040954.1:intron
GGTTTCTCATCTAGACAAAT+TGG	0.286159	7:+105520995	MsaT040954.1:CDS
CCCTTCCAGGCGTATCCTCT+TGG	0.318732	7:-105522028	None:intergenic
CAAAGACTGCTGTGCAAATC+AGG	0.320713	7:+105513075	MsaT040954.1:CDS
CGTTCCGCCCCTGCTTTCCT+TGG	0.327004	7:-105521977	None:intergenic
ATATCTCCTTGATCTGTCTT+AGG	0.340962	7:-105521184	None:intergenic
CATCATCTATCTTCAACATC+TGG	0.356720	7:-105520433	None:intergenic
TGCCGAAGATACAGATGAAC+AGG	0.360829	7:-105520279	None:intergenic
ATGAGGAGGTGAAAAGCTTT+GGG	0.361595	7:-105521749	None:intergenic
CTTGCTGCAGCATGGGCTGC+AGG	0.364555	7:-105520902	None:intergenic
GAACCCTGATTCCAACAAAA+TGG	0.366904	7:+105521396	MsaT040954.1:CDS
CTAGAAGCCCTCAAGCTATA+TGG	0.366925	7:+105512941	MsaT040954.1:CDS
TTGCTCCACTATGTAATGTT+GGG	0.369916	7:-105520000	None:intergenic
TTACATAGTGGAGCAAAGTA+TGG	0.371275	7:+105520007	MsaT040954.1:CDS
GAATCAGGGTTCTCAGAAAC+TGG	0.380151	7:-105521385	None:intergenic
GACAAATTCCTGCACCATAA+GGG	0.382064	7:+105520334	MsaT040954.1:CDS
CATGAGGAGGTGAAAAGCTT+TGG	0.391387	7:-105521750	None:intergenic
CTTGTAAAAGGTGCTGCATT+AGG	0.396536	7:+105519893	MsaT040954.1:CDS
CTTCTATATCGACGACTACT+AGG	0.397927	7:-105521556	None:intergenic
GGATTTCTAACCATGGGTCT+TGG	0.398079	7:+105521892	MsaT040954.1:CDS
AAACTTAAGACTCGTCGAAC+AGG	0.401478	7:+105521922	MsaT040954.1:CDS
TGGTGCTGTGGACTTCGTTT+TGG	0.406608	7:+105512373	MsaT040954.1:CDS
CACGTTGTTGATGGGAACTT+TGG	0.409244	7:+105520614	MsaT040954.1:CDS
ACATTGGTCTTGCGAGGATA+AGG	0.411349	7:-105519971	None:intergenic
GATTCTCCTGCTTGCTCTCA+AGG	0.412243	7:+105520971	MsaT040954.1:CDS
AGAACAATTCTCCAACTTAG+AGG	0.412800	7:-105520492	None:intergenic
TCCCATGGCCTCTGAGTTTG+TGG	0.413076	7:+105511830	MsaT040954.1:CDS
GCTGGATTTGCGAAGAGATT+AGG	0.415370	7:-105520716	None:intergenic
CCTTCCAGGCGTATCCTCTT+GGG	0.419975	7:-105522027	None:intergenic
GAGAAGGAAGCACTTGTAAA+AGG	0.422043	7:+105519881	MsaT040954.1:CDS
CGAGCATGGCAGCGTATAGA+AGG	0.422755	7:+105512965	MsaT040954.1:CDS
GGAGAATTGTTCTCCGAAAT+CGG	0.424106	7:+105520502	MsaT040954.1:CDS
AGACAAATTCCTGCACCATA+AGG	0.431378	7:+105520333	MsaT040954.1:CDS
TCACTTGTGTTTGATGCAGC+TGG	0.433165	7:-105520734	None:intergenic
AGCAAAACTTGCTGCAGCAT+GGG	0.435145	7:-105520909	None:intergenic
GCTTTGGGGCAACACCTCTC+TGG	0.439351	7:-105521734	None:intergenic
AAATGCATTTCTTGCTCTCA+AGG	0.445522	7:-105521813	None:intergenic
TAGTAGAGGCCAAGGAAAGC+AGG	0.446953	7:+105521968	MsaT040954.1:CDS
ACTGCATGGTGGGCAGCTCA+TGG	0.449952	7:+105521067	MsaT040954.1:CDS
ATCACTGTGCACGTTGTTGA+TGG	0.454210	7:+105520605	MsaT040954.1:CDS
TGTTTACTAATATTTGTTGA+TGG	0.455780	7:-105521157	None:intergenic
GAGGACAGGCAAAAGCTGTC+TGG	0.462645	7:-105521114	None:intergenic
ACAAATTCCTGCACCATAAG+GGG	0.465629	7:+105520335	MsaT040954.1:CDS
GTTTATATCAAGATTAATAG+TGG	0.465812	7:-105521359	None:intergenic
CTTGCTCATGCAGAACATAT+AGG	0.466013	7:+105513050	MsaT040954.1:intron
ACCCTGTTCATCTGTATCTT+CGG	0.470243	7:+105520277	MsaT040954.1:CDS
TGCTCGGCCATATAGCTTGA+GGG	0.477143	7:-105512948	None:intergenic
CCAACGCTTCTTTGCTTACG+TGG	0.478415	7:-105511765	None:intergenic
TTGCGAGGATAAGGATTGCT+TGG	0.483780	7:-105519962	None:intergenic
GACTCTACATTTCAGCCAAT+AGG	0.484471	7:+105520677	MsaT040954.1:CDS
TTTGCTCCACTATGTAATGT+TGG	0.491563	7:-105520001	None:intergenic
AGCTGCTGCAACTGCATGGT+GGG	0.492943	7:+105521057	MsaT040954.1:CDS
CAAGGAAAGCAGGGGCGGAA+CGG	0.493129	7:+105521978	MsaT040954.1:CDS
CAACCACCTAAGACAGATCA+AGG	0.494885	7:+105521178	MsaT040954.1:CDS
CAAGAGGATACGCCTGGAAG+GGG	0.496539	7:+105522029	MsaT040954.1:CDS
GTAGCTAAATGATCCGCATC+AGG	0.496824	7:-105521529	None:intergenic
TCAGCATGGTTATGTGCAAA+TGG	0.496955	7:-105520812	None:intergenic
TGGGACCCGTCTCTTCAACT+TGG	0.503574	7:-105522008	None:intergenic
CCAAGAGGATACGCCTGGAA+GGG	0.504041	7:+105522028	MsaT040954.1:CDS
AGTTGTTGATGCAGGAGGAC+AGG	0.504260	7:-105521128	None:intergenic
GTTATTACCTCTTTCACTGA+AGG	0.506309	7:-105520365	None:intergenic
CTTCTATACGCTGCCATGCT+CGG	0.509729	7:-105512964	None:intergenic
GGGTCCCAAGAGGATACGCC+TGG	0.511211	7:+105522023	MsaT040954.1:CDS
CAGGGTTCTCAGAAACTGGT+TGG	0.511462	7:-105521381	None:intergenic
GTTTACACCTTCAGTGAAAG+AGG	0.512851	7:+105520358	MsaT040954.1:CDS
CCTTCTTGATTCTTGGAAGG+AGG	0.514276	7:+105521588	MsaT040954.1:CDS
CATTTGTCGAACCTCTAAGT+TGG	0.515112	7:+105520481	MsaT040954.1:CDS
CCACGTAAGCAAAGAAGCGT+TGG	0.516332	7:+105511765	MsaT040954.1:CDS
CAACCTTCTTGATTCTTGGA+AGG	0.517741	7:+105521585	MsaT040954.1:CDS
TGTAGAAGACATGTTGAGAA+AGG	0.517978	7:-105520843	None:intergenic
TTGCTGCAGCATGGGCTGCA+GGG	0.518760	7:-105520901	None:intergenic
ACCCACAAACTCAGAGGCCA+TGG	0.520747	7:-105511832	None:intergenic
ATGCTCGGCCATATAGCTTG+AGG	0.521384	7:-105512949	None:intergenic
CCCAAGAGGATACGCCTGGA+AGG	0.522353	7:+105522027	MsaT040954.1:CDS
ACGTGCACAGTGATATGTCT+TGG	0.523923	7:-105520596	None:intergenic
CAGCAAAACTTGCTGCAGCA+TGG	0.533463	7:-105520910	None:intergenic
CGTGCACAGTGATATGTCTT+GGG	0.533974	7:-105520595	None:intergenic
CACGTAAGCAAAGAAGCGTT+GGG	0.535828	7:+105511766	MsaT040954.1:CDS
AAAAGTATTAACAGTCCTCA+AGG	0.540476	7:+105520250	MsaT040954.1:CDS
TCTCCTTGATCTGTCTTAGG+TGG	0.542096	7:-105521181	None:intergenic
GATTCAGATGAAGAAACAGC+TGG	0.543112	7:-105521295	None:intergenic
CTGATAGACCGGTCTTCTTG+TGG	0.544065	7:+105521430	MsaT040954.1:CDS
TGAGAAAGAATCACTTCTAG+AGG	0.549009	7:+105520081	MsaT040954.1:CDS
CAGTAGCTGCTGCAACTGCA+TGG	0.549463	7:+105521053	MsaT040954.1:CDS
GAAGATTCTACATTTGCATA+CGG	0.549998	7:-105520944	None:intergenic
TTCACAGCTAGAGGTTGTGT+TGG	0.551194	7:-105521455	None:intergenic
AGAGGATACGCCTGGAAGGG+GGG	0.551215	7:+105522031	MsaT040954.1:CDS
AGAGAAGGATGAGAAAGAAA+AGG	0.551265	7:+105521492	MsaT040954.1:CDS
CTAACCATGGGTCTTGGACA+AGG	0.551976	7:+105521898	MsaT040954.1:CDS
AAGAGGATACGCCTGGAAGG+GGG	0.554626	7:+105522030	MsaT040954.1:CDS
TTCACACGGTAAACAAGCAA+TGG	0.555075	7:+105520054	MsaT040954.1:CDS
CAGATGTTGAAGATAGATGA+TGG	0.559885	7:+105520434	MsaT040954.1:CDS
AGTAGAGGCCAAGGAAAGCA+GGG	0.563052	7:+105521969	MsaT040954.1:CDS
TTGGGTCCACAATTGACAGC+TGG	0.564573	7:+105511784	MsaT040954.1:CDS
TATCCTCGCAAGACCAATGT+TGG	0.566159	7:+105519974	MsaT040954.1:CDS
TGTTTCTTCATCTGAATCAG+AGG	0.567469	7:+105521300	MsaT040954.1:CDS
AAGATGTTTAGTAGAGGCCA+AGG	0.570129	7:+105521960	MsaT040954.1:CDS
TAATGTTGGGGTACCAACAT+TGG	0.570681	7:-105519987	None:intergenic
TCTACATTTCAGCCAATAGG+AGG	0.570815	7:+105520680	MsaT040954.1:CDS
TGCAACCAAGTTGAAGAGAC+GGG	0.572457	7:+105522003	MsaT040954.1:CDS
TTTACCTTGTCCAAGACCCA+TGG	0.574964	7:-105521902	None:intergenic
TCCTTATTTATCAAATCATG+AGG	0.575227	7:-105521766	None:intergenic
AGTAACTGATCTTGCAGAGG+AGG	0.576051	7:-105521220	None:intergenic
GTACAAAATAACAATGAGGA+GGG	0.578098	7:+105521871	MsaT040954.1:CDS
AAACCTCCTTGAGAGCAAGC+AGG	0.579136	7:-105520977	None:intergenic
TGTTGGAACCACAAGAAGAC+CGG	0.580340	7:-105521438	None:intergenic
TAAGTTAAATACTTCATCAA+AGG	0.580402	7:+105521336	MsaT040954.1:CDS
GATAAATAAGGATAATCAGA+TGG	0.582791	7:+105521777	MsaT040954.1:CDS
AGGAGCATAAAGATGAGGAA+AGG	0.584458	7:+105520189	MsaT040954.1:intron
ATCAGTCTCTTCACAGCTAG+AGG	0.585395	7:-105521464	None:intergenic
AAGACATGTTGAGAAAGGAT+TGG	0.586137	7:-105520838	None:intergenic
TCAAGCTATATGGCCGAGCA+TGG	0.586429	7:+105512951	MsaT040954.1:CDS
CAGGCAAAAGCTGTCTGGAG+TGG	0.586706	7:-105521109	None:intergenic
TACATTTCAGCCAATAGGAG+GGG	0.587380	7:+105520682	MsaT040954.1:CDS
GAGGCCAAGGAAAGCAGGGG+CGG	0.588873	7:+105521973	MsaT040954.1:CDS
GAAAGGATTGGTAATCAGCA+TGG	0.589647	7:-105520826	None:intergenic
GGCTGCAGGGTGTTGCAGCA+AGG	0.592386	7:-105520888	None:intergenic
TCACTGTGCACGTTGTTGAT+GGG	0.593058	7:+105520606	MsaT040954.1:CDS
TTGCAACCAAGTTGAAGAGA+CGG	0.593914	7:+105522002	MsaT040954.1:CDS
TGCTCCACTATGTAATGTTG+GGG	0.594962	7:-105519999	None:intergenic
CCCATGGCCTCTGAGTTTGT+GGG	0.596858	7:+105511831	MsaT040954.1:CDS
AGGGCAGAAAACTGATAGAC+CGG	0.597583	7:+105521419	MsaT040954.1:CDS
AGGAAATGATTGATGACTAG+AGG	0.599729	7:-105520780	None:intergenic
GGAGCTACAGTTGTTGATGC+AGG	0.599804	7:-105521136	None:intergenic
AGAGACTGATGCGCTAGAGA+AGG	0.599937	7:+105521477	MsaT040954.1:CDS
GAAGATGCAATTGCAATAAG+TGG	0.600078	7:-105520034	None:intergenic
CCTCCTTCCAAGAATCAAGA+AGG	0.605249	7:-105521588	None:intergenic
GTCTGGAGTGGAGCGCACAC+AGG	0.605716	7:-105521097	None:intergenic
ATGAACAGGGTGCCTCCTTG+AGG	0.606893	7:-105520265	None:intergenic
AGAATGTAAAATACCTGATG+CGG	0.606991	7:+105521516	MsaT040954.1:CDS
TGTACAAAATAACAATGAGG+AGG	0.608346	7:+105521870	MsaT040954.1:CDS
GAGGAGGGATTTCTAACCAT+GGG	0.609248	7:+105521886	MsaT040954.1:CDS
CCCTGATTCCAACAAAATGG+AGG	0.609942	7:+105521399	MsaT040954.1:CDS
TTGGAAGGAGGTGTCTGAAG+AGG	0.610275	7:+105521600	MsaT040954.1:CDS
GCTGCAATAGCTGTTACACT+AGG	0.611198	7:-105521025	None:intergenic
ATGCATTTGTAATTGTGACC+AGG	0.611387	7:+105521828	MsaT040954.1:CDS
TGTCTGCCAGCTGTCAATTG+TGG	0.613429	7:-105511790	None:intergenic
ATTGCAATTGCATCTTCACA+CGG	0.615445	7:+105520040	MsaT040954.1:CDS
CTACATTTCAGCCAATAGGA+GGG	0.615585	7:+105520681	MsaT040954.1:CDS
CCCACAAACTCAGAGGCCAT+GGG	0.615882	7:-105511831	None:intergenic
TTATGTGCAAATGGAGGACA+AGG	0.617284	7:-105520803	None:intergenic
TCTCCTGCTTGCTCTCAAGG+AGG	0.617634	7:+105520974	MsaT040954.1:CDS
TCATCTGAATCAGAGGAGAG+TGG	0.620785	7:+105521307	MsaT040954.1:CDS
GCAATAGCTGTTACACTAGG+AGG	0.623513	7:-105521022	None:intergenic
TTACAAAAGATGTTTAGTAG+AGG	0.626106	7:+105521954	MsaT040954.1:CDS
ACATTTCAGCCAATAGGAGG+GGG	0.626802	7:+105520683	MsaT040954.1:CDS
AACTTAAGACTCGTCGAACA+GGG	0.627230	7:+105521923	MsaT040954.1:CDS
TCTGGAGAATAGAGCCCGAA+AGG	0.627276	7:-105521716	None:intergenic
GGTACCCCAACATTACATAG+TGG	0.634415	7:+105519995	MsaT040954.1:CDS
CCTGATTCCAACAAAATGGA+GGG	0.636366	7:+105521400	MsaT040954.1:CDS
CAAATTCCTGCACCATAAGG+GGG	0.636736	7:+105520336	MsaT040954.1:CDS
GTTCAATCCGAGAAAACAGA+TGG	0.637949	7:+105520524	MsaT040954.1:CDS
TCACAAAACAAAGAGAACGT+TGG	0.639437	7:+105512894	MsaT040954.1:CDS
TAGCTGCTGCAACTGCATGG+TGG	0.645180	7:+105521056	MsaT040954.1:CDS
GTACCAACATTGGTCTTGCG+AGG	0.646677	7:-105519977	None:intergenic
TGAGGAGGTGAAAAGCTTTG+GGG	0.648977	7:-105521748	None:intergenic
TTATTTATCAAATCATGAGG+AGG	0.652992	7:-105521763	None:intergenic
AAGTGAAAATCAAAATAACA+TGG	0.654350	7:+105520751	MsaT040954.1:CDS
GCATGGTTATGTGCAAATGG+AGG	0.655038	7:-105520809	None:intergenic
TGAGGAGGGATTTCTAACCA+TGG	0.655042	7:+105521885	MsaT040954.1:CDS
ATGGTGCAGGAATTTGTCTG+TGG	0.659918	7:-105520329	None:intergenic
GTAGAGGCCAAGGAAAGCAG+GGG	0.661260	7:+105521970	MsaT040954.1:CDS
TCTAGTAACTGATCTTGCAG+AGG	0.667647	7:-105521223	None:intergenic
TTGAAGAGACGGGTCCCAAG+AGG	0.668417	7:+105522013	MsaT040954.1:CDS
GCTACAGTTGTTGATGCAGG+AGG	0.672632	7:-105521133	None:intergenic
TGTGCAAATGGAGGACAAGG+AGG	0.682903	7:-105520800	None:intergenic
AGATGAGGAAAGGCCAACGA+CGG	0.690777	7:+105520199	MsaT040954.1:CDS
ATTTGTACAAAATAACAATG+AGG	0.690995	7:+105521867	MsaT040954.1:CDS
AAACACACACAAAAGAACGA+TGG	0.697228	7:+105520458	MsaT040954.1:CDS
TCGGGCTCTATTCTCCAGAG+AGG	0.699278	7:+105521720	MsaT040954.1:CDS
AATCTCACCCACAAACTCAG+AGG	0.700699	7:-105511838	None:intergenic
AGTATTAACAGTCCTCAAGG+AGG	0.725209	7:+105520253	MsaT040954.1:CDS
GCCGAAGATACAGATGAACA+GGG	0.736992	7:-105520278	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	105511762	105522065	105511762	ID=MsaG040954
Chr7	mRNA	105511762	105522065	105511762	ID=MsaT040954.1;Parent=MsaG040954
Chr7	exon	105511762	105511852	105511762	ID=MsaT040954.1.exon1;Parent=MsaT040954.1
Chr7	CDS	105511762	105511852	105511762	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105512369	105512394	105512369	ID=MsaT040954.1.exon2;Parent=MsaT040954.1
Chr7	CDS	105512369	105512394	105512369	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105512875	105512986	105512875	ID=MsaT040954.1.exon3;Parent=MsaT040954.1
Chr7	CDS	105512875	105512986	105512875	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105513063	105513124	105513063	ID=MsaT040954.1.exon4;Parent=MsaT040954.1
Chr7	CDS	105513063	105513124	105513063	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105519878	105520102	105519878	ID=MsaT040954.1.exon5;Parent=MsaT040954.1
Chr7	CDS	105519878	105520102	105519878	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105520191	105521621	105520191	ID=MsaT040954.1.exon6;Parent=MsaT040954.1
Chr7	CDS	105520191	105521621	105520191	ID=cds.MsaT040954.1;Parent=MsaT040954.1
Chr7	exon	105521706	105522065	105521706	ID=MsaT040954.1.exon7;Parent=MsaT040954.1
Chr7	CDS	105521706	105522065	105521706	ID=cds.MsaT040954.1;Parent=MsaT040954.1

Gene Sequence

>MsaT040954.1

ATGCCACGTAAGCAAAGAAGCGTTGGGTCCACAATTGACAGCTGGCAGACACTTTTTTACGGACGAAATCCCATGGCCTCTGAGTTTGTGGGTTTTGGTGCTGTGGACTTCGTTTTGACAAGAAAGCCATATACAATCACAAAACAAAGAGAACGTTGGACAGATGACGAACATAATCGATTTCTAGAAGCCCTCAAGCTATATGGCCGAGCATGGCAGCGTATAGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCACTTGTAAAAGGTGCTGCATTAGGACAAGCTCTTGACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGCAAGACCAATGTTGGTACCCCAACATTACATAGTGGAGCAAAGTATGGAAAGCCACTTATTGCAATTGCATCTTCACACGGTAAACAAGCAATGGATTTTGAGAAAGAATCACTTCTAGAGGAGCATAAAGATGAGGAAAGGCCAACGACGGTAAAAGAAAATAACGATGAAAATTGTTTAAAAGTATTAACAGTCCTCAAGGAGGCACCCTGTTCATCTGTATCTTCGGCAATCAAGAGTTCAATCTCAATGTCAGTGCCACAGACAAATTCCTGCACCATAAGGGGGTTTACACCTTCAGTGAAAGAGGTAATAACACGAGATGAAACAAATGAATCTTTTCCTACTACTGAGATTGAAAACCAGATGTTGAAGATAGATGATGGCAAACACACACAAAAGAACGATGGCATTTGTCGAACCTCTAAGTTGGAGAATTGTTCTCCGAAATCGGTTCAATCCGAGAAAACAGATGGTCTTACTTCTGCATTAACAGTTGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCACGTTGTTGATGGGAACTTTGGAACTAGTATTCAAAGTCCATCACAAAATATGTTGATTCAAGACTCTACATTTCAGCCAATAGGAGGGGGTAATGTGCAGCCTAATCTCTTCGCAAATCCAGCTGCATCAAACACAAGTGAAAATCAAAATAACATGGCACGATCCTCTAGTCATCAATCATTTCCTCCTTGTCCTCCATTTGCACATAACCATGCTGATTACCAATCCTTTCTCAACATGTCTTCTACATTTTCAAGTCTTATTGTCTCTACCTTGCTGCAACACCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCGTATGCAAATGTAGAATCTTCAGCTGATTCTCCTGCTTGCTCTCAAGGAGGTTTCTCATCTAGACAAATTGGTTCACCTCCTAGTGTAACAGCTATTGCAGCTGCTACAGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGACTGCTTCCTGTGTGCGCTCCACTCCAGACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTAGCTCCATCAACAAATATTAGTAAACAACCACCTAAGACAGATCAAGGAGATATTACACTACAAAATCCTCCTCTGCAAGATCAGTTACTAGATCCAGAAAACTCAGAAGCTTTGCAAGCTCAACATTCAGGTTCTAAGTCACCAGCTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATGCTAAGTTAAATACTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAGTTTCTGAGAACCCTGATTCCAACAAAATGGAGGGCAGAAAACTGATAGACCGGTCTTCTTGTGGTTCCAACACAACCTCTAGCTGTGAAGAGACTGATGCGCTAGAGAAGGATGAGAAAGAAAAGGAAGAATGTAAAATACCTGATGCGGATCATTTAGCTACTGATCCTAGTAGTCGTCGATATAGAAGCATTAGCAACCTTCTTGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGACTTGCCTTTCGGGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCATGATTTGATAAATAAGGATAATCAGATGGACAACAAAGATCACCTTGAGAGCAAGAAATGCATTTGTAATTGTGACCAGGCACAGCAAAACCTACCATTTGTACAAAATAACAATGAGGAGGGATTTCTAACCATGGGTCTTGGACAAGGTAAACTTAAGACTCGTCGAACAGGGTTCAAACCTTACAAAAGATGTTTAGTAGAGGCCAAGGAAAGCAGGGGCGGAACGGCTTGCAACCAAGTTGAAGAGACGGGTCCCAAGAGGATACGCCTGGAAGGGGGGACTTCTATTTGA

Protein sequence

>MsaT040954.1

MPRKQRSVGSTIDSWQTLFYGRNPMASEFVGFGAVDFVLTRKPYTITKQRERWTDDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSGAKYGKPLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTVLKEAPCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDDGKHTQKNDGICRTSKLENCSPKSVQSEKTDGLTSALTVDEMQSNQNYPRHITVHVVDGNFGTSIQSPSQNMLIQDSTFQPIGGGNVQPNLFANPAASNTSENQNNMARSSSHQSFPPCPPFAHNHADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFSSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPVCAPLQTAFACPPASTTVAPSTNISKQPPKTDQGDITLQNPPLQDQLLDPENSEALQAQHSGSKSPAVSSSESEESGDAKLNTSSKATINLDINQPVSENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEECKIPDADHLATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKDNQMDNKDHLESKKCICNCDQAQQNLPFVQNNNEEGFLTMGLGQGKLKTRRTGFKPYKRCLVEAKESRGGTACNQVEETGPKRIRLEGGTSI*