AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG041065

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG041065 MtrunA17_Chr8g0335351 99.611 771 3 0 1 771 1 771 0.0 1586
MsaG041065 MtrunA17_Chr7g0250631 77.749 773 158 7 1 771 1 761 0.0 1189
MsaG041065 MtrunA17_Chr2g0290691 69.048 504 134 6 276 771 115 604 0.0 699
MsaG041065 MtrunA17_Chr7g0227331 65.121 496 134 8 288 771 150 618 0.0 619
MsaG041065 MtrunA17_Chr6g0449401 58.969 524 152 7 287 771 180 679 0.0 608
MsaG041065 MtrunA17_Chr1g0179101 63.744 422 143 5 312 727 410 827 0.0 554
MsaG041065 MtrunA17_Chr7g0266031 58.584 466 179 7 265 721 383 843 0.0 553
MsaG041065 MtrunA17_Chr2g0309421 59.701 469 158 8 316 771 121 571 0.0 546
MsaG041065 MtrunA17_Chr8g0356291 59.770 435 156 6 345 771 101 524 5.38e-179 523
MsaG041065 MtrunA17_Chr3g0080101 63.706 394 130 5 338 722 380 769 3.12e-175 523
MsaG041065 MtrunA17_Chr4g0063311 55.750 400 154 6 341 721 62 457 3.13e-147 440
MsaG041065 MtrunA17_Chr2g0285711 48.090 445 185 8 302 721 2 425 1.63e-127 388
MsaG041065 MtrunA17_Chr2g0321101 52.604 384 147 5 350 714 67 434 2.91e-127 387
MsaG041065 MtrunA17_Chr8g0381091 49.487 390 166 6 345 721 52 423 1.79e-123 377
MsaG041065 MtrunA17_Chr2g0312641 46.763 417 175 11 317 720 37 419 3.90e-112 349
MsaG041065 MtrunA17_Chr8g0369091 46.457 381 159 4 345 725 572 907 4.79e-109 354
MsaG041065 MtrunA17_Chr4g0030361 43.133 415 181 4 317 724 247 613 8.45e-108 343
MsaG041065 MtrunA17_Chr2g0327561 44.769 411 189 4 333 742 588 961 2.64e-102 337
MsaG041065 MtrunA17_Chr8g0338741 39.005 382 183 12 367 727 15 367 2.12e-75 251
MsaG041065 MtrunA17_Chr4g0032761 39.678 373 194 10 367 721 10 369 6.20e-72 241
MsaG041065 MtrunA17_Chr2g0329011 39.216 357 180 7 367 721 12 333 6.79e-71 237
MsaG041065 MtrunA17_Chr7g0234641 35.792 366 205 8 367 722 8 353 5.75e-66 225
MsaG041065 MtrunA17_Chr5g0428981 35.693 339 172 6 372 709 763 1056 5.22e-54 202
MsaG041065 MtrunA17_Chr4g0018201 35.398 339 173 6 372 709 759 1052 8.30e-54 201
MsaG041065 MtrunA17_Chr6g0478601 34.463 354 187 6 369 721 108 417 2.70e-52 190
MsaG041065 MtrunA17_Chr3g0135951 33.983 359 194 11 360 709 82 406 7.62e-51 186
MsaG041065 MtrunA17_Chr1g0153321 32.432 407 226 11 360 757 96 462 1.07e-50 186
MsaG041065 MtrunA17_Chr1g0187581 32.345 371 201 9 360 720 105 435 1.19e-48 180
MsaG041065 MtrunA17_Chr1g0183651 31.892 370 203 10 360 720 108 437 1.54e-47 177
MsaG041065 MtrunA17_Chr7g0261491 33.240 358 193 10 360 709 108 427 1.29e-46 175
MsaG041065 MtrunA17_Chr1g0167351 32.853 347 193 8 367 709 105 415 2.01e-45 171
MsaG041065 MtrunA17_Chr2g0299781 31.034 377 211 9 360 724 101 440 9.30e-44 166
MsaG041065 MtrunA17_Chr1g0167311 30.670 388 217 11 367 739 110 460 4.34e-43 164
MsaG041065 MtrunA17_Chr7g0245031 39.869 153 90 1 367 519 143 293 3.54e-27 115
MsaG041065 MtrunA17_Chr7g0245031 44.248 113 60 2 598 709 299 409 3.43e-20 94.7
MsaG041065 MtrunA17_Chr1g0197721 35.323 201 114 5 369 563 48 238 5.73e-26 112
MsaG041065 MtrunA17_Chr1g0197721 32.836 134 84 3 591 720 203 334 9.50e-12 68.2
MsaG041065 MtrunA17_Chr4g0059751 37.037 162 89 3 367 519 84 241 5.01e-25 108
MsaG041065 MtrunA17_Chr4g0059751 38.596 114 67 2 598 710 247 358 1.58e-20 95.1
MsaG041065 MtrunA17_Chr2g0286501 27.329 322 157 8 369 689 46 291 4.89e-20 95.9
MsaG041065 MtrunA17_Chr3g0140631 34.868 152 97 1 369 520 34 183 3.63e-19 89.0
MsaG041065 MtrunA17_Chr3g0140631 34.259 108 67 1 597 704 185 288 6.75e-14 73.2
MsaG041065 MtrunA17_Chr8g0351491 25.364 343 175 9 363 705 7 268 5.28e-19 88.2
MsaG041065 MtrunA17_Chr3g0125381 38.393 112 65 1 594 705 100 207 6.00e-19 86.3
MsaG041065 MtrunA17_Chr4g0001331 24.405 336 176 8 369 704 17 274 8.63e-18 87.0
MsaG041065 MtrunA17_Chr4g0013131 33.121 157 102 1 363 519 3 156 9.29e-18 87.0
MsaG041065 MtrunA17_Chr2g0302431 31.313 198 115 5 359 537 7 202 2.89e-16 82.4
MsaG041065 MtrunA17_Chr3g0107011 31.126 151 101 1 369 519 11 158 2.94e-16 82.4
MsaG041065 MtrunA17_Chr8g0353621 33.333 150 98 1 372 521 10 157 4.79e-16 79.3
MsaG041065 MtrunA17_Chr8g0353621 38.614 101 58 1 603 703 164 260 2.32e-14 74.3
MsaG041065 MtrunA17_Chr3g0114511 33.333 156 99 2 364 519 24 174 9.37e-16 80.5
MsaG041065 MtrunA17_Chr4g0008561 24.595 370 187 14 376 736 23 309 1.06e-15 81.3
MsaG041065 MtrunA17_Chr1g0205421 34.177 158 97 3 363 518 3 155 1.24e-15 80.1
MsaG041065 MtrunA17_Chr7g0272841 33.742 163 99 5 372 528 68 227 1.30e-15 80.9
MsaG041065 MtrunA17_Chr2g0284031 32.680 153 100 1 367 519 26 175 2.09e-15 80.1
MsaG041065 MtrunA17_Chr5g0432471 29.801 151 103 2 369 519 9 156 2.83e-15 79.3
MsaG041065 MtrunA17_Chr1g0150321 26.269 335 167 11 372 705 13 268 3.11e-15 79.0
MsaG041065 MtrunA17_Chr8g0379091 30.159 189 115 3 367 553 21 194 4.03e-15 79.0
MsaG041065 MtrunA17_Chr2g0304111 30.387 181 119 3 372 552 23 196 6.89e-15 77.8
MsaG041065 MtrunA17_Chr1g0200601 34.756 164 95 5 361 520 25 180 7.63e-15 78.2
MsaG041065 MtrunA17_Chr4g0025671 28.289 152 107 2 369 519 5 155 7.92e-15 79.0
MsaG041065 MtrunA17_Chr1g0202831 33.540 161 93 5 370 523 409 562 9.09e-15 78.6
MsaG041065 MtrunA17_Chr1g0188031 32.026 153 100 3 369 519 17 167 1.08e-14 77.0
MsaG041065 MtrunA17_Chr7g0244521 30.968 155 104 2 365 519 5 156 1.21e-14 77.4
MsaG041065 MtrunA17_Chr5g0432491 33.784 148 96 2 372 519 23 168 1.39e-14 77.0
MsaG041065 MtrunA17_Chr3g0107051 31.757 148 98 1 372 519 21 165 1.50e-14 76.6
MsaG041065 MtrunA17_Chr2g0321841 27.632 152 108 2 369 519 1 151 1.51e-14 77.8
MsaG041065 MtrunA17_Chr5g0428031 28.415 183 112 5 372 537 9 189 1.80e-14 76.6
MsaG041065 MtrunA17_Chr1g0190831 28.289 152 107 2 369 519 1 151 3.01e-14 76.6
MsaG041065 MtrunA17_Chr4g0074811 37.662 154 88 6 372 520 91 241 3.27e-14 76.3
MsaG041065 MtrunA17_Chr8g0346071 28.994 169 118 2 372 540 17 183 4.11e-14 75.5
MsaG041065 MtrunA17_Chr6g0486661 33.333 126 76 4 600 720 912 1034 6.50e-14 75.9
MsaG041065 MtrunA17_Chr1g0190131 30.968 155 89 4 370 516 7 151 1.35e-13 72.0
MsaG041065 MtrunA17_Chr8g0385341 33.333 153 96 4 372 520 30 180 1.60e-13 73.9
MsaG041065 MtrunA17_Chr1g0173921 27.632 152 108 2 369 519 1 151 1.68e-13 74.7
MsaG041065 MtrunA17_Chr1g0185221 28.289 152 107 2 369 519 1 151 1.93e-13 73.9
MsaG041065 MtrunA17_Chr2g0284011 31.414 191 105 7 365 534 5 190 2.45e-13 73.2
MsaG041065 MtrunA17_Chr5g0419441 28.571 154 107 2 370 523 237 387 3.20e-13 73.6
MsaG041065 MtrunA17_Chr4g0074111 30.263 152 100 3 372 523 18 163 4.22e-13 72.0
MsaG041065 MtrunA17_Chr3g0132591 36.025 161 92 4 378 537 118 268 4.42e-13 72.4
MsaG041065 MtrunA17_Chr7g0260191 27.922 154 105 3 369 519 1 151 4.46e-13 72.8
MsaG041065 MtrunA17_Chr6g0453681 29.801 151 104 1 369 519 16 164 4.51e-13 72.4
MsaG041065 MtrunA17_Chr8g0386981 32.639 144 93 2 378 519 414 555 4.52e-13 73.2
MsaG041065 MtrunA17_Chr8g0346081 26.506 166 120 1 372 537 17 180 5.36e-13 72.0
MsaG041065 MtrunA17_Chr6g0468751 29.801 151 104 1 369 519 16 164 5.42e-13 72.4
MsaG041065 MtrunA17_Chr5g0444171 32.370 173 108 5 352 520 75 242 9.02e-13 71.6
MsaG041065 MtrunA17_Chr7g0258051 26.144 153 113 0 369 521 13 165 1.28e-12 71.2
MsaG041065 MtrunA17_Chr7g0274941 30.263 152 101 3 367 516 11 159 1.44e-12 69.3
MsaG041065 MtrunA17_Chr4g0000431 28.723 188 121 5 367 553 19 194 1.50e-12 71.2
MsaG041065 MtrunA17_Chr1g0203881 32.237 152 97 3 372 519 41 190 1.75e-12 70.5
MsaG041065 MtrunA17_Chr3g0091311 31.410 156 104 2 364 519 4 156 2.00e-12 68.2
MsaG041065 MtrunA17_Chr1g0176421 33.121 157 101 4 372 526 161 315 2.07e-12 70.9
MsaG041065 MtrunA17_Chr5g0448721 32.680 153 97 4 372 520 96 246 2.17e-12 70.5
MsaG041065 MtrunA17_Chr4g0063881 29.167 144 100 1 376 519 15 156 3.34e-12 69.3
MsaG041065 MtrunA17_Chr2g0317001 26.230 183 124 3 370 552 13 184 4.19e-12 69.7
MsaG041065 MtrunA17_Chr3g0091281 31.395 172 106 5 364 528 4 170 4.72e-12 66.6
MsaG041065 MtrunA17_Chr5g0441011 29.375 160 106 3 360 519 6 158 5.13e-12 68.9
MsaG041065 MtrunA17_Chr1g0173541 31.034 174 116 4 355 526 35 206 5.22e-12 69.3
MsaG041065 MtrunA17_Chr4g0047191 34.653 101 66 0 419 519 94 194 6.07e-12 68.2
MsaG041065 MtrunA17_Chr4g0047211 34.653 101 66 0 419 519 89 189 6.82e-12 67.8
MsaG041065 MtrunA17_Chr1g0188991 27.604 192 124 5 372 562 15 192 6.99e-12 68.9
MsaG041065 MtrunA17_Chr8g0345801 32.558 129 84 2 377 505 20 145 7.33e-12 66.6
MsaG041065 MtrunA17_Chr5g0441691 32.026 153 98 5 372 520 68 218 7.57e-12 68.6
MsaG041065 MtrunA17_Chr1g0170281 32.026 153 98 4 372 520 118 268 7.92e-12 68.6
MsaG041065 MtrunA17_Chr8g0384301 29.825 171 113 5 369 536 296 462 9.07e-12 68.6
MsaG041065 MtrunA17_Chr7g0257751 32.258 155 99 4 370 520 56 208 1.42e-11 67.8
MsaG041065 MtrunA17_Chr3g0130151 31.507 146 96 2 376 519 248 391 1.66e-11 67.8
MsaG041065 MtrunA17_Chr3g0098951 31.765 170 107 6 355 520 70 234 1.72e-11 67.4
MsaG041065 MtrunA17_Chr1g0166101 29.605 152 104 2 369 519 21 170 1.90e-11 67.0
MsaG041065 MtrunA17_Chr8g0388891 24.904 261 174 9 265 519 37 281 2.07e-11 66.6
MsaG041065 MtrunA17_Chr7g0267751 31.818 154 97 4 372 520 135 285 2.11e-11 67.4
MsaG041065 MtrunA17_Chr4g0059951 33.333 153 96 4 372 520 73 223 2.62e-11 67.0
MsaG041065 MtrunA17_Chr2g0276831 32.927 164 95 6 365 521 3 158 3.17e-11 65.9
MsaG041065 MtrunA17_Chr7g0256001 29.843 191 118 6 369 552 138 319 3.30e-11 66.6
MsaG041065 MtrunA17_Chr5g0405421 29.605 152 103 2 372 519 99 250 3.70e-11 66.6
MsaG041065 MtrunA17_Chr1g0170551 33.019 106 65 2 603 708 162 261 4.27e-11 67.0
MsaG041065 MtrunA17_Chr4g0038501 25.806 186 130 2 372 557 20 197 8.51e-11 65.9
MsaG041065 MtrunA17_Chr2g0333821 30.464 151 102 2 369 519 11 158 8.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG041065 AT2G44830.2 65.360 791 225 21 1 771 4 765 0.0 947
MsaG041065 AT2G44830.3 65.360 791 225 21 1 771 4 765 0.0 947
MsaG041065 AT2G44830.1 65.360 791 225 21 1 771 4 765 0.0 947
MsaG041065 AT5G47750.1 67.054 516 146 6 266 771 85 586 0.0 685
MsaG041065 AT4G26610.1 72.066 426 115 3 305 727 55 479 0.0 640
MsaG041065 AT5G55910.2 68.615 462 125 7 315 771 52 498 0.0 626
MsaG041065 AT5G55910.1 68.615 462 125 7 315 771 52 498 0.0 626
MsaG041065 AT5G40030.1 63.170 448 140 9 331 771 70 499 0.0 570
MsaG041065 AT3G27580.2 60.677 473 165 7 309 771 117 578 0.0 554
MsaG041065 AT3G27580.1 60.677 473 165 7 309 771 117 578 0.0 554
MsaG041065 AT1G79250.1 69.509 387 110 5 344 725 118 501 0.0 549
MsaG041065 AT1G79250.3 69.509 387 110 5 344 725 118 501 0.0 549
MsaG041065 AT1G79250.2 69.509 387 110 5 344 725 118 501 0.0 549
MsaG041065 AT1G79250.4 69.509 387 110 5 344 725 118 501 0.0 549
MsaG041065 AT3G12690.1 60.440 455 146 6 332 771 142 577 0.0 542
MsaG041065 AT3G12690.3 60.440 455 146 6 332 771 142 577 0.0 542
MsaG041065 AT3G12690.2 60.440 455 146 6 332 771 142 577 0.0 542
MsaG041065 AT3G52890.2 58.333 468 167 8 316 771 483 934 3.55e-180 540
MsaG041065 AT3G52890.4 58.333 468 167 8 316 771 483 934 3.55e-180 540
MsaG041065 AT3G52890.1 58.333 468 167 8 316 771 483 934 3.55e-180 540
MsaG041065 AT3G52890.3 58.333 468 167 8 316 771 483 934 3.55e-180 540
MsaG041065 AT1G16440.1 61.048 439 134 7 345 771 86 499 2.00e-179 523
MsaG041065 AT2G36350.1 59.819 443 141 9 343 771 530 949 7.80e-177 532
MsaG041065 AT5G03640.2 59.674 429 143 7 310 721 480 895 1.53e-172 520
MsaG041065 AT5G03640.1 59.674 429 143 7 310 721 480 895 1.53e-172 520
MsaG041065 AT2G26700.1 46.091 486 206 10 290 722 1 483 6.59e-133 405
MsaG041065 AT2G34650.1 52.284 394 153 9 345 728 50 418 5.81e-129 391
MsaG041065 AT3G44610.1 52.973 370 132 6 372 715 71 424 6.51e-126 384
MsaG041065 AT5G58140.6 45.855 386 161 4 346 728 551 891 2.23e-107 350
MsaG041065 AT5G58140.7 45.855 386 161 4 346 728 551 891 2.23e-107 350
MsaG041065 AT5G58140.5 45.855 386 161 4 346 728 551 891 2.23e-107 350
MsaG041065 AT5G58140.2 45.855 386 161 4 346 728 551 891 2.23e-107 350
MsaG041065 AT5G58140.1 45.855 386 161 4 346 728 551 891 2.23e-107 350
MsaG041065 AT3G14370.1 46.194 381 173 6 347 722 61 414 2.77e-107 337
MsaG041065 AT5G58140.3 46.631 371 153 3 346 716 551 876 8.97e-106 345
MsaG041065 AT3G45780.2 45.926 405 175 5 321 724 611 972 3.60e-104 343
MsaG041065 AT3G45780.1 45.926 405 175 5 321 724 611 972 3.60e-104 343
MsaG041065 AT1G53700.1 44.675 385 168 7 347 720 66 416 2.11e-101 321
MsaG041065 AT1G51170.1 39.782 367 184 9 367 721 17 358 4.74e-73 244
MsaG041065 AT3G20830.1 40.054 367 187 10 366 721 15 359 5.72e-69 233
MsaG041065 AT4G13000.1 37.119 361 190 8 367 723 15 342 5.06e-68 229
MsaG041065 AT3G25250.1 37.398 369 188 9 367 723 12 349 1.45e-67 229
MsaG041065 AT1G45160.2 35.989 364 181 7 362 723 661 974 7.78e-55 205
MsaG041065 AT1G45160.1 35.989 364 181 7 362 723 661 974 1.74e-54 204
MsaG041065 AT1G48490.3 36.467 351 171 11 360 709 817 1116 5.34e-51 194
MsaG041065 AT1G48490.2 36.467 351 171 11 360 709 817 1116 5.34e-51 194
MsaG041065 AT1G48490.1 36.467 351 171 11 360 709 817 1116 5.34e-51 194
MsaG041065 AT1G48490.4 36.467 351 171 11 360 709 818 1117 5.39e-51 194
MsaG041065 AT1G30640.2 33.604 369 204 9 360 722 108 441 5.53e-51 187
MsaG041065 AT1G30640.1 33.604 369 204 9 360 722 108 441 5.53e-51 187
MsaG041065 AT1G30640.3 33.604 369 204 9 360 722 15 348 6.49e-51 185
MsaG041065 AT5G62310.1 34.795 342 178 7 369 709 751 1048 3.92e-50 191
MsaG041065 AT3G17850.1 34.795 342 178 6 369 709 879 1176 1.96e-49 189
MsaG041065 AT5G09890.2 32.955 352 202 6 360 709 90 409 3.89e-49 181
MsaG041065 AT5G09890.1 32.955 352 202 6 360 709 90 409 3.97e-49 181
MsaG041065 AT4G33080.1 33.053 357 201 9 360 709 82 407 7.82e-49 181
MsaG041065 AT4G33080.2 33.053 357 201 9 360 709 82 407 8.47e-49 180
MsaG041065 AT1G03920.2 33.613 357 195 9 360 712 12 330 1.26e-47 176
MsaG041065 AT2G20470.3 32.493 357 198 8 360 712 112 429 2.21e-47 177
MsaG041065 AT2G20470.2 32.493 357 198 8 360 712 112 429 3.45e-47 177
MsaG041065 AT2G20470.1 32.493 357 198 8 360 712 112 429 3.45e-47 177
MsaG041065 AT1G03920.1 33.613 357 195 9 360 712 125 443 3.51e-47 177
MsaG041065 AT1G03920.3 33.613 357 195 9 360 712 125 443 3.51e-47 177
MsaG041065 AT4G14350.2 31.667 360 205 9 367 722 114 436 2.05e-44 169
MsaG041065 AT4G14350.1 31.667 360 205 9 367 722 114 436 2.05e-44 169
MsaG041065 AT4G14350.4 31.667 360 205 9 367 722 114 436 2.05e-44 169
MsaG041065 AT4G14350.3 31.667 360 205 9 367 722 114 436 2.40e-44 168
MsaG041065 AT3G23310.1 31.805 349 195 9 367 709 115 426 5.89e-44 167
MsaG041065 AT2G19400.1 32.213 357 203 11 361 709 94 419 3.33e-39 153
MsaG041065 AT5G58140.4 48.092 131 68 0 346 476 551 681 1.80e-32 134
MsaG041065 AT3G08720.1 39.355 155 92 1 365 519 133 285 8.51e-28 118
MsaG041065 AT3G08720.1 46.847 111 55 3 600 709 293 400 2.14e-23 104
MsaG041065 AT3G08720.3 39.355 155 92 1 365 519 133 285 8.51e-28 118
MsaG041065 AT3G08720.3 46.847 111 55 3 600 709 293 400 2.14e-23 104
MsaG041065 AT3G08720.4 39.355 155 92 1 365 519 133 285 8.51e-28 118
MsaG041065 AT3G08720.4 46.847 111 55 3 600 709 293 400 2.14e-23 104
MsaG041065 AT3G08720.2 39.355 155 92 1 365 519 133 285 8.51e-28 118
MsaG041065 AT3G08720.2 46.847 111 55 3 600 709 293 400 2.14e-23 104
MsaG041065 AT3G08730.1 38.710 155 93 1 365 519 127 279 3.17e-27 116
MsaG041065 AT3G08730.1 44.531 128 62 4 599 720 286 410 2.58e-24 107
MsaG041065 AT3G08730.2 38.710 155 93 1 365 519 127 279 3.17e-27 116
MsaG041065 AT3G08730.2 44.531 128 62 4 599 720 286 410 2.58e-24 107
MsaG041065 AT5G04510.2 33.503 197 117 3 372 563 44 231 9.40e-25 108
MsaG041065 AT5G04510.2 34.483 145 88 4 591 730 196 338 3.70e-18 88.2
MsaG041065 AT5G04510.1 33.503 197 117 3 372 563 44 231 1.33e-24 108
MsaG041065 AT5G04510.1 34.483 145 88 4 591 730 196 338 4.78e-18 88.6
MsaG041065 AT5G04510.3 37.931 145 88 1 372 516 44 186 2.25e-24 104
MsaG041065 AT3G10540.1 32.995 197 118 3 372 563 45 232 5.47e-24 106
MsaG041065 AT3G10540.1 33.333 165 99 5 591 750 197 355 1.00e-18 90.5
MsaG041065 AT5G18700.1 39.073 151 84 3 369 519 1 143 8.86e-22 102
MsaG041065 AT2G20050.1 38.655 119 67 4 597 712 931 1046 5.70e-18 89.7
MsaG041065 AT2G20050.2 38.655 119 67 4 597 712 928 1043 5.89e-18 89.4
MsaG041065 AT2G25880.1 35.762 151 95 1 370 520 23 171 1.14e-17 84.7
MsaG041065 AT2G25880.1 36.111 108 65 1 597 704 173 276 1.20e-14 75.9
MsaG041065 AT4G32830.1 34.868 152 97 1 369 520 28 177 2.14e-17 84.0
MsaG041065 AT4G32830.1 36.111 108 65 1 597 704 179 282 3.87e-14 74.3
MsaG041065 AT2G25880.4 35.762 151 95 1 370 520 36 184 2.59e-17 84.0
MsaG041065 AT2G25880.4 36.111 108 65 1 597 704 186 289 1.53e-14 75.5
MsaG041065 AT2G45490.1 32.258 155 103 2 369 523 19 171 3.21e-17 83.6
MsaG041065 AT2G45490.1 37.037 108 64 1 597 704 170 273 5.41e-17 82.8
MsaG041065 AT5G57630.2 32.461 191 103 7 365 534 2 187 4.41e-17 84.7
MsaG041065 AT2G45490.2 32.258 155 103 2 369 523 19 171 4.48e-17 82.4
MsaG041065 AT2G45490.2 35.294 85 55 0 597 681 170 254 3.33e-11 64.7
MsaG041065 AT5G57630.1 32.461 191 103 7 365 534 2 187 4.85e-17 84.7
MsaG041065 AT5G45820.1 33.121 157 102 2 363 519 3 156 5.26e-17 84.7
MsaG041065 AT2G25880.3 35.762 151 95 1 370 520 84 232 5.37e-17 84.0
MsaG041065 AT2G25880.3 36.449 107 64 1 597 703 234 336 3.38e-14 75.5
MsaG041065 AT1G35670.1 36.585 164 92 5 361 520 21 176 1.24e-16 84.0
MsaG041065 AT3G04810.2 28.947 152 106 2 369 519 1 151 2.41e-16 83.6
MsaG041065 AT3G04810.1 28.947 152 106 2 369 519 1 151 2.41e-16 83.6
MsaG041065 AT3G04810.3 28.947 152 106 2 369 519 1 151 2.41e-16 83.6
MsaG041065 AT1G12680.1 34.356 163 96 4 376 537 111 263 3.40e-16 82.4
MsaG041065 AT4G18700.1 32.680 153 100 1 367 519 21 170 5.14e-16 82.0
MsaG041065 AT4G24400.1 31.757 148 99 1 372 519 9 154 5.70e-16 81.6
MsaG041065 AT1G29230.1 32.642 193 112 5 363 553 66 242 6.60e-16 82.0
MsaG041065 AT4G24400.2 31.757 148 99 1 372 519 9 154 7.17e-16 81.3
MsaG041065 AT5G28290.1 29.605 152 105 2 369 519 1 151 1.24e-15 81.3
MsaG041065 AT5G28290.2 29.605 152 105 2 369 519 1 151 1.24e-15 81.3
MsaG041065 AT5G28290.3 29.605 152 105 2 369 519 1 151 1.24e-15 81.3
MsaG041065 AT5G45810.1 31.373 153 102 1 367 519 23 172 1.83e-15 80.5
MsaG041065 AT1G54510.4 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
MsaG041065 AT1G54510.2 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
MsaG041065 AT1G54510.1 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
MsaG041065 AT1G54510.3 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
MsaG041065 AT3G06030.1 32.240 183 105 6 352 528 58 227 4.99e-15 79.7
MsaG041065 AT5G25110.1 31.788 151 100 2 369 519 40 187 5.33e-15 79.0
MsaG041065 AT3G44200.2 28.947 152 106 2 369 519 5 155 5.50e-15 79.7
MsaG041065 AT3G44200.1 28.947 152 106 2 369 519 5 155 5.50e-15 79.7
MsaG041065 AT4G14580.1 24.242 330 174 8 365 692 14 269 6.88e-15 78.2
MsaG041065 AT2G25880.2 36.111 108 65 1 597 704 141 244 7.96e-15 75.5
MsaG041065 AT2G34180.1 31.875 160 106 1 361 520 46 202 8.47e-15 78.2
MsaG041065 AT4G09570.1 35.366 164 94 5 361 520 20 175 9.54e-15 78.2
MsaG041065 AT3G63280.2 28.947 152 106 2 369 519 1 151 9.96e-15 78.2
MsaG041065 AT3G63280.3 28.947 152 106 2 369 519 1 151 9.96e-15 78.2
MsaG041065 AT3G63280.1 28.947 152 106 2 369 519 1 151 9.96e-15 78.2
MsaG041065 AT3G01090.3 31.126 151 102 1 369 519 16 164 1.06e-14 78.2
MsaG041065 AT3G01090.1 31.126 151 102 1 369 519 16 164 1.06e-14 78.2
MsaG041065 AT2G30360.1 32.704 159 98 4 364 519 15 167 1.29e-14 77.4
MsaG041065 AT5G10930.1 35.762 151 89 6 372 519 12 157 1.46e-14 77.4
MsaG041065 AT3G01090.2 31.126 151 102 1 369 519 39 187 1.54e-14 77.8
MsaG041065 AT3G63280.4 28.387 155 109 2 366 519 52 205 1.63e-14 77.8
MsaG041065 AT3G29160.3 31.788 151 101 2 369 519 17 165 2.35e-14 75.9
MsaG041065 AT2G25090.1 31.606 193 124 6 363 553 6 192 2.80e-14 76.6
MsaG041065 AT5G21326.1 25.155 322 164 11 372 691 13 259 3.61e-14 75.9
MsaG041065 AT5G01810.1 34.591 159 97 4 363 519 3 156 3.66e-14 75.9
MsaG041065 AT5G01810.2 34.591 159 97 4 363 519 3 156 3.66e-14 75.9
MsaG041065 AT3G29160.1 31.788 151 101 2 369 519 17 165 3.87e-14 76.3
MsaG041065 AT3G29160.2 31.788 151 101 2 369 519 17 165 3.87e-14 76.3
MsaG041065 AT1G53570.6 29.825 171 115 3 368 536 210 377 4.41e-14 76.3
MsaG041065 AT1G53570.7 29.825 171 115 3 368 536 210 377 4.47e-14 76.3
MsaG041065 AT5G01810.3 34.591 159 97 4 363 519 3 156 4.72e-14 75.1
MsaG041065 AT1G53570.1 29.825 171 115 3 368 536 210 377 5.04e-14 76.3
MsaG041065 AT1G09000.1 29.448 163 108 3 372 529 69 229 5.53e-14 76.3
MsaG041065 AT1G53570.2 29.825 171 115 3 368 536 210 377 5.98e-14 75.9
MsaG041065 AT1G53570.3 29.825 171 115 3 368 536 210 377 5.98e-14 75.9
MsaG041065 AT1G53570.4 29.825 171 115 3 368 536 210 377 6.35e-14 75.9
MsaG041065 AT1G09000.2 29.448 163 108 3 372 529 69 229 6.37e-14 75.9
MsaG041065 AT1G54960.1 29.012 162 108 3 372 528 68 227 7.15e-14 75.9
MsaG041065 AT1G54960.2 29.012 162 108 3 372 528 68 227 7.15e-14 75.9
MsaG041065 AT3G17510.1 31.788 151 101 2 369 519 17 165 7.45e-14 75.1
MsaG041065 AT4G04720.2 32.370 173 105 4 358 520 60 230 9.20e-14 75.1
MsaG041065 AT4G04720.1 32.370 173 105 4 358 520 60 230 9.20e-14 75.1
MsaG041065 AT1G30270.1 29.012 162 109 2 369 530 28 183 1.93e-13 73.9
MsaG041065 AT2G26980.1 29.801 151 104 2 369 519 11 159 1.98e-13 73.2
MsaG041065 AT2G26980.3 30.405 148 101 2 372 519 14 159 2.42e-13 73.6
MsaG041065 AT2G26980.4 31.690 142 95 2 378 519 30 169 2.60e-13 73.6
MsaG041065 AT5G39440.1 32.450 151 100 2 369 519 16 164 2.67e-13 73.6
MsaG041065 AT1G30270.2 29.012 162 109 2 369 530 28 183 2.72e-13 73.6
MsaG041065 AT3G10660.2 33.987 153 95 4 372 520 186 336 2.93e-13 73.9
MsaG041065 AT3G10660.1 33.987 153 95 4 372 520 186 336 2.93e-13 73.9
MsaG041065 AT1G69220.1 29.870 154 105 2 370 523 247 397 2.98e-13 73.9
MsaG041065 AT3G20860.1 27.815 151 108 1 369 519 1 150 3.38e-13 72.8
MsaG041065 AT2G26980.2 31.250 144 97 2 376 519 18 159 4.00e-13 70.9
MsaG041065 AT2G41860.1 33.987 153 95 4 372 520 54 204 4.36e-13 73.2
MsaG041065 AT2G41860.2 33.987 153 95 4 372 520 54 204 4.48e-13 73.2
MsaG041065 AT2G26980.5 29.801 151 104 2 369 519 11 159 4.73e-13 72.4
MsaG041065 AT5G58380.1 30.282 142 96 2 378 519 18 156 5.96e-13 72.4
MsaG041065 AT5G35410.2 28.492 179 109 5 376 537 15 191 6.57e-13 71.6
MsaG041065 AT1G50700.3 33.333 153 96 4 372 520 73 223 7.24e-13 72.0
MsaG041065 AT4G35310.2 33.333 153 96 4 372 520 97 247 7.71e-13 72.4
MsaG041065 AT4G35310.1 33.333 153 96 4 372 520 97 247 7.71e-13 72.4
MsaG041065 AT2G35890.2 28.899 218 144 6 317 526 72 286 9.08e-13 72.0
MsaG041065 AT2G35890.1 28.899 218 144 6 317 526 72 286 9.08e-13 72.0
MsaG041065 AT1G53165.1 26.630 184 121 4 369 552 15 184 9.93e-13 72.4
MsaG041065 AT1G63700.1 29.299 157 107 2 370 524 398 552 1.02e-12 72.4
MsaG041065 AT1G63700.2 29.299 157 107 2 370 524 398 552 1.02e-12 72.4
MsaG041065 AT1G50700.1 33.333 153 96 4 372 520 73 223 1.02e-12 72.0
MsaG041065 AT1G53165.3 26.630 184 121 4 369 552 15 184 1.22e-12 72.0
MsaG041065 AT1G53165.2 26.630 184 121 4 369 552 15 184 1.24e-12 72.0
MsaG041065 AT5G35410.1 28.492 179 109 5 376 537 15 191 1.34e-12 71.2
MsaG041065 AT4G24100.1 28.571 182 119 3 372 553 33 203 1.55e-12 71.6
MsaG041065 AT1G50700.2 33.333 153 96 4 372 520 73 223 1.68e-12 71.2
MsaG041065 AT4G24100.4 28.571 182 119 3 372 553 49 219 1.79e-12 71.6
MsaG041065 AT4G24100.2 28.571 182 119 3 372 553 33 203 2.00e-12 71.2
MsaG041065 AT3G20410.2 31.765 170 107 5 355 520 77 241 2.08e-12 70.9
MsaG041065 AT3G20410.1 31.765 170 107 5 355 520 77 241 2.08e-12 70.9
MsaG041065 AT4G24100.3 28.571 182 119 3 372 553 49 219 2.50e-12 70.9
MsaG041065 AT2G17290.1 33.333 153 96 4 372 520 85 235 2.81e-12 70.5
MsaG041065 AT2G17290.2 33.333 153 96 4 372 520 85 235 2.81e-12 70.5
MsaG041065 AT1G24650.1 31.937 191 112 9 340 518 513 697 3.21e-12 70.9
MsaG041065 AT5G19360.1 32.903 155 98 5 370 520 66 218 3.29e-12 70.1
MsaG041065 AT2G38490.1 35.762 151 88 5 372 519 28 172 3.31e-12 69.7
MsaG041065 AT5G01820.1 31.757 148 98 1 372 519 22 166 6.01e-12 68.9
MsaG041065 AT3G57530.2 32.903 155 98 4 370 520 61 213 7.26e-12 68.6
MsaG041065 AT4G10730.2 28.947 190 120 6 372 560 27 202 7.86e-12 69.3
MsaG041065 AT4G10730.1 28.947 190 120 6 372 560 47 222 8.22e-12 69.3
MsaG041065 AT5G12180.1 32.680 153 97 5 372 520 73 223 8.80e-12 68.9
MsaG041065 AT3G57530.1 34.559 136 86 3 370 504 61 194 9.37e-12 68.9
MsaG041065 AT1G01140.2 27.815 151 107 2 369 519 16 164 1.12e-11 68.2
MsaG041065 AT1G01140.3 28.743 167 112 3 353 519 5 164 1.14e-11 68.2
MsaG041065 AT1G01140.1 27.815 151 107 2 369 519 16 164 1.16e-11 68.2
MsaG041065 AT2G31500.1 33.987 153 95 4 372 520 66 216 1.60e-11 68.2
MsaG041065 AT1G32320.1 32.192 146 89 3 375 519 51 187 1.87e-11 66.2
MsaG041065 AT1G73500.1 31.288 163 93 5 375 533 50 197 1.96e-11 66.2
MsaG041065 AT1G50240.3 27.059 170 120 2 367 536 1 166 2.57e-11 68.2
MsaG041065 AT1G50240.3 33.981 103 62 2 603 705 161 257 4.82e-11 67.0
MsaG041065 AT1G50240.2 27.059 170 120 2 367 536 1 166 2.57e-11 68.2
MsaG041065 AT1G50240.2 33.981 103 62 2 603 705 161 257 4.82e-11 67.0
MsaG041065 AT3G56760.1 30.729 192 117 6 370 554 122 304 2.60e-11 67.4
MsaG041065 AT4G14480.1 29.530 149 102 2 372 519 15 161 2.78e-11 67.0
MsaG041065 AT2G17890.1 30.921 152 101 2 372 519 108 259 2.83e-11 67.4
MsaG041065 AT3G23000.1 29.747 158 96 3 369 519 22 171 2.87e-11 67.0
MsaG041065 AT3G61960.1 34.884 129 81 3 377 505 15 140 2.98e-11 67.4
MsaG041065 AT5G23580.1 30.726 179 115 5 349 523 2 175 3.25e-11 67.0
MsaG041065 AT3G61960.2 34.884 129 81 3 377 505 15 140 3.32e-11 67.0
MsaG041065 AT5G18610.1 34.356 163 99 4 362 519 73 232 3.33e-11 67.0
MsaG041065 AT5G18610.2 34.356 163 99 4 362 519 73 232 3.33e-11 67.0
MsaG041065 AT5G18610.3 34.356 163 99 4 362 519 73 232 3.33e-11 67.0
MsaG041065 AT1G69220.2 29.371 143 98 2 381 523 231 370 3.37e-11 67.4
MsaG041065 AT4G38230.2 32.680 153 97 4 372 520 54 204 3.52e-11 67.0
MsaG041065 AT5G66210.6 30.065 153 103 2 371 519 61 213 3.75e-11 66.6
MsaG041065 AT5G66210.4 30.065 153 103 2 371 519 61 213 3.75e-11 66.6
MsaG041065 AT5G66210.3 30.065 153 103 2 371 519 61 213 3.88e-11 66.6
MsaG041065 AT4G38230.4 32.680 153 97 4 372 520 24 174 4.94e-11 66.2
MsaG041065 AT4G38230.3 32.680 153 97 4 372 520 24 174 4.94e-11 66.2
MsaG041065 AT5G66210.1 30.065 153 103 2 371 519 61 213 5.44e-11 66.2
MsaG041065 AT5G66210.2 30.065 153 103 2 371 519 61 213 5.44e-11 66.2
MsaG041065 AT5G66210.5 30.065 153 103 2 371 519 61 213 5.67e-11 66.2
MsaG041065 AT4G29810.1 30.508 177 116 4 360 534 58 229 5.69e-11 65.5
MsaG041065 AT4G04710.2 27.619 210 133 7 350 552 17 214 6.27e-11 65.9
MsaG041065 AT4G29810.2 30.508 177 116 4 360 534 67 238 8.26e-11 65.1
MsaG041065 AT4G04710.1 27.619 210 133 7 350 552 17 214 8.39e-11 65.9
MsaG041065 AT4G04710.4 27.619 210 133 7 350 552 17 214 8.96e-11 65.5
MsaG041065 AT4G29810.3 31.214 173 112 4 364 534 71 238 9.31e-11 64.7

Find 221 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTGGTCTTGGCACTTC+TGG 0.186142 8:+1273169 None:intergenic
CCTTCCCCTTTGATAATTTC+AGG 0.198008 8:+1273484 None:intergenic
CCGATTACGAGATGGAATTT+TGG 0.203762 8:-1275031 MsaT041065.1:CDS
ATTTCCTTTGTGAGGCTTAT+TGG 0.207003 8:+1275083 None:intergenic
TCCTCGAAACTTGCCGATTC+TGG 0.248940 8:-1276081 MsaT041065.1:CDS
TTTATTGGTTCAAGATGATA+TGG 0.255030 8:-1275868 MsaT041065.1:CDS
AGATCTGTATCAACAGGTTC+TGG 0.263724 8:+1275663 None:intergenic
GGTCAAAGTCAGAGACTAAA+TGG 0.267206 8:-1276017 MsaT041065.1:CDS
CTTTCTTTGAAGGTGTAAAC+TGG 0.284251 8:-1273216 MsaT041065.1:CDS
CAGATCCCTGCTGGCATAAC+TGG 0.287651 8:+1273315 None:intergenic
TCTTTGCCTCCTACACCTAA+TGG 0.296261 8:-1275360 MsaT041065.1:CDS
GCCCATGAAGGGTCCTTTCC+TGG 0.302200 8:-1275574 MsaT041065.1:CDS
GACCGACCGTTTCTCTTGTT+TGG 0.324721 8:-1274791 MsaT041065.1:CDS
GTAGGCTCAGCAACAAGCTC+TGG 0.351703 8:+1273553 None:intergenic
GATCTCTCAATCCGTGTTAC+CGG 0.352022 8:-1275549 MsaT041065.1:CDS
CCAAAATTCCATCTCGTAAT+CGG 0.356631 8:+1275031 None:intergenic
AAGCAGCATCCTTTCTTTGA+AGG 0.363915 8:-1273226 MsaT041065.1:CDS
AATTGGACTTGGTTTCTTCC+CGG 0.368313 8:+1275530 None:intergenic
TTCTTGCATGAACTGTTATA+CGG 0.369620 8:-1273424 MsaT041065.1:CDS
TCAGCTTCTTTCTGCTTGCT+AGG 0.371087 8:+1274890 None:intergenic
TAACTGGTTGCAGGTGATTC+GGG 0.375857 8:+1273331 None:intergenic
GACCACCAGTTGATGCTGTC+GGG 0.375980 8:-1273108 MsaT041065.1:CDS
CTTTGCCTCCTACACCTAAT+GGG 0.380423 8:-1275359 MsaT041065.1:CDS
CCGTTTCTCTTGTTTGGTGA+TGG 0.381881 8:-1274785 MsaT041065.1:CDS
TTCATTGGTGGTGGCGGTGG+CGG 0.382553 8:+1273136 None:intergenic
ATAACTGGTTGCAGGTGATT+CGG 0.387533 8:+1273330 None:intergenic
CTGCTGGCATAACTGGTTGC+AGG 0.387794 8:+1273322 None:intergenic
TCTTGAGGGGAAAGAACAAT+TGG 0.387877 8:+1275513 None:intergenic
GCCTCAGTGATGACAGTAAC+TGG 0.392470 8:-1275125 MsaT041065.1:CDS
GGGAATAATGAAATGAAGTC+TGG 0.393724 8:-1273058 MsaT041065.1:CDS
GCAGTTGACTGGTGGACATT+TGG 0.399493 8:-1273451 MsaT041065.1:CDS
AAGAGCCGCAACATCGTCTT+GGG 0.401195 8:-1273273 MsaT041065.1:CDS
CTCATAAGATCTGTATCAAC+AGG 0.409221 8:+1275657 None:intergenic
GGAAACCCAGGTTCAGCTCT+TGG 0.411838 8:+1273589 None:intergenic
TTCCAGGAAAGGACCCTTCA+TGG 0.420297 8:+1275572 None:intergenic
GTATACAAAGTTGGAAGAAA+TGG 0.421797 8:+1274823 None:intergenic
GAGGTGACCTACACACTTTA+AGG 0.422441 8:-1274750 MsaT041065.1:CDS
ATTGGTGGTGGCGGTGGCGG+CGG 0.424607 8:+1273139 None:intergenic
CTTGAATATCTTCACATGCT+TGG 0.427624 8:-1273868 MsaT041065.1:CDS
ACCTTCATTGGTGGTGGCGG+TGG 0.430120 8:+1273133 None:intergenic
ACGTCTTTACTTGAAGTTGA+AGG 0.431342 8:-1275780 MsaT041065.1:CDS
AAACTTGCCGATTCTGGTTG+AGG 0.431580 8:-1276075 MsaT041065.1:CDS
ACTTTAAGGCAGCGGCAACC+TGG 0.433550 8:-1274736 MsaT041065.1:CDS
TGTGGACTGGCATTCCCATT+AGG 0.433623 8:+1275345 None:intergenic
GTGTAAACTGGGCATTGATT+AGG 0.434545 8:-1273204 MsaT041065.1:CDS
CAAGTTCTTAATTAAGCATC+CGG 0.444672 8:+1275596 None:intergenic
GGTGATCCGACTTTATTTGC+CGG 0.445751 8:-1275699 MsaT041065.1:CDS
CTTCAACAAGACTTTCTTGA+GGG 0.449259 8:+1275499 None:intergenic
TTGCTCCTGAAATTATCAAA+GGG 0.449378 8:-1273489 MsaT041065.1:CDS
AGTAACTGGAGCAACCTTAC+TGG 0.455347 8:-1275111 MsaT041065.1:CDS
AGTACTAGTAAGAGGATGTC+GGG 0.455362 8:-1273079 MsaT041065.1:CDS
ACTGGTGGTCCAACCTTCAT+TGG 0.456414 8:+1273121 None:intergenic
CTGGGATCATTTCCTTTGTG+AGG 0.459717 8:+1275075 None:intergenic
GGAAAGCAGCGATTCGTTTG+AGG 0.460403 8:-1275724 MsaT041065.1:CDS
GATCTGTATCAACAGGTTCT+GGG 0.460711 8:+1275664 None:intergenic
TGACGGTGACCCTTCAAAAC+GGG 0.464150 8:-1273725 MsaT041065.1:CDS
CAGCTTCTTTCTGCTTGCTA+GGG 0.468174 8:+1274891 None:intergenic
TCAAAATGTGTATACAAAGT+TGG 0.468878 8:+1274814 None:intergenic
GGTTTCCCGACCCTTTGAAA+GGG 0.469448 8:+1273395 None:intergenic
CCAACCCCGACAGCATCAAC+TGG 0.474246 8:+1273103 None:intergenic
CTATCTCCTTTGAGCCTACT+CGG 0.476224 8:-1275818 MsaT041065.1:CDS
TACGGTAAAACCCCTTTCAA+AGG 0.476458 8:-1273406 MsaT041065.1:CDS
GACTTGGATGTGGTGACATT+GGG 0.478567 8:-1274981 MsaT041065.1:CDS
CCAGTTGATGCTGTCGGGGT+TGG 0.480914 8:-1273103 MsaT041065.1:CDS
CAGTTTACACCTTCAAAGAA+AGG 0.482696 8:+1273217 None:intergenic
CGGTTTCCCGACCCTTTGAA+AGG 0.484132 8:+1273394 None:intergenic
ATAGCACTAAGGGTAGTGTA+AGG 0.486304 8:-1275203 MsaT041065.1:CDS
TAAAGTGTGTAGGTCACCTC+CGG 0.487101 8:+1274753 None:intergenic
AATTAAGAACTTGCCCATGA+AGG 0.490933 8:-1275586 MsaT041065.1:CDS
ATCGAGGCCAAACGTGTCAT+AGG 0.491526 8:+1275924 None:intergenic
GGATGTGCCTATGACACGTT+TGG 0.494093 8:-1275931 MsaT041065.1:CDS
AAAACCCCTTTCAAAGGGTC+GGG 0.494609 8:-1273400 MsaT041065.1:CDS
GCTTATTGGCACTACCAGTA+AGG 0.495920 8:+1275097 None:intergenic
AACAAGCTCTGGAAGTCTGC+TGG 0.498281 8:+1273564 None:intergenic
AAAGAGCCGCAACATCGTCT+TGG 0.499673 8:-1273274 MsaT041065.1:CDS
GGGGAAAGAACAATTGGACT+TGG 0.500249 8:+1275519 None:intergenic
ATGACGGTGACCCTTCAAAA+CGG 0.500802 8:-1273726 MsaT041065.1:CDS
GGTGATACCTCAACCAGAAT+CGG 0.502365 8:+1276068 None:intergenic
CCAACCTTCATTGGTGGTGG+CGG 0.502378 8:+1273130 None:intergenic
ACCAGAATCGGCAAGTTTCG+AGG 0.505820 8:+1276080 None:intergenic
ATCTATACTACTATGTGGAC+TGG 0.506600 8:+1275332 None:intergenic
CACGGATTGAGAGATCTTCC+AGG 0.506931 8:+1275556 None:intergenic
CTGCAACCAGTTATGCCAGC+AGG 0.507809 8:-1273321 MsaT041065.1:CDS
ATTAAGAACTTGCCCATGAA+GGG 0.509867 8:-1275585 MsaT041065.1:CDS
GAAAGGATGCTGCTTGATCT+CGG 0.511805 8:+1273234 None:intergenic
CGACTTGGATGTGGTGACAT+TGG 0.512089 8:-1274982 MsaT041065.1:CDS
TAAACTAAGCATGCCATCGC+TGG 0.514066 8:+1275239 None:intergenic
CTCACAAAGGAAATGATCCC+AGG 0.514314 8:-1275074 MsaT041065.1:CDS
GCCACCGCCACCACCAATGA+AGG 0.515875 8:-1273134 MsaT041065.1:CDS
CTTGCTCCTGAAATTATCAA+AGG 0.515966 8:-1273490 MsaT041065.1:CDS
GGTCAAAACAAATCTGAGTC+CGG 0.516128 8:-1275615 MsaT041065.1:CDS
TTTCAGGAGCAAGGTATTCG+TGG 0.516151 8:+1273500 None:intergenic
AGAATTGAATCAATTGTCGC+AGG 0.517107 8:-1275958 MsaT041065.1:CDS
GAATCAATTGTCGCAGGGAA+GGG 0.518040 8:-1275952 MsaT041065.1:CDS
TAGAAACTTTGATAGCACTA+AGG 0.520159 8:-1275214 MsaT041065.1:CDS
GGTCCAACCTTCATTGGTGG+TGG 0.520213 8:+1273127 None:intergenic
GGACCACCAGTTGATGCTGT+CGG 0.520532 8:-1273109 MsaT041065.1:CDS
GACATAGAACGGGCAGCAGT+AGG 0.521733 8:+1273535 None:intergenic
CTTTGATAATTTCAGGAGCA+AGG 0.522560 8:+1273491 None:intergenic
ACCGACGAAGGACATAGAAC+GGG 0.523482 8:+1273525 None:intergenic
ACGGTAAAACCCCTTTCAAA+GGG 0.524392 8:-1273405 MsaT041065.1:CDS
GACGCTCGAGAACCTGCAAA+AGG 0.524432 8:+1275447 None:intergenic
TTTCCTTTCCATGTCCGAGT+AGG 0.524678 8:+1275804 None:intergenic
TATTCAGAGAAATGTTTCCC+AGG 0.527556 8:+1274718 None:intergenic
TAAAACCCCTTTCAAAGGGT+CGG 0.529026 8:-1273401 MsaT041065.1:CDS
ATCTCTCAATCCGTGTTACC+GGG 0.530112 8:-1275548 MsaT041065.1:CDS
CTTTAAGGCAGCGGCAACCT+GGG 0.531322 8:-1274735 MsaT041065.1:CDS
TGAATCAATTGTCGCAGGGA+AGG 0.533409 8:-1275953 MsaT041065.1:CDS
CATAGTAGTATAGATAGTAT+TGG 0.534889 8:-1275324 MsaT041065.1:CDS
CCGCCACCACCAATGAAGGT+TGG 0.535518 8:-1273130 MsaT041065.1:CDS
ATTATCAAAGGGGAAGGTCA+TGG 0.538808 8:-1273478 MsaT041065.1:CDS
TTTCGATTACTCAAACGACT+TGG 0.544521 8:-1274997 MsaT041065.1:CDS
GGAATAATGAAATGAAGTCT+GGG 0.545579 8:-1273057 MsaT041065.1:CDS
TGCTATGAAGGTTATGGACA+AGG 0.546101 8:-1274917 MsaT041065.1:CDS
TTGGTGATGGAATATTGTCC+CGG 0.547008 8:-1274772 MsaT041065.1:CDS
CCTTTGAGCCTACTCGGACA+TGG 0.551009 8:-1275812 MsaT041065.1:CDS
AGGAAGCCAAGAGCTGAACC+TGG 0.553932 8:-1273595 MsaT041065.1:CDS
ACTGGTCTTGGCACTTCTGG+TGG 0.554421 8:+1273172 None:intergenic
ATCTGTATCAACAGGTTCTG+GGG 0.557890 8:+1275665 None:intergenic
GAGCCTACTCGGACATGGAA+AGG 0.558030 8:-1275807 MsaT041065.1:CDS
GTCATGGAAGTGCAGTTGAC+TGG 0.558774 8:-1273462 MsaT041065.1:CDS
GTCAAAGTCAGAGACTAAAT+GGG 0.560716 8:-1276016 MsaT041065.1:CDS
CCTTAAACCTGAAAATGTGT+TGG 0.562690 8:-1273830 MsaT041065.1:CDS
GGCTCAAAGGAGATAGACTC+AGG 0.562900 8:+1275825 None:intergenic
GCAGCGACTGCAAGAGATGT+AGG 0.563271 8:-1276038 MsaT041065.1:CDS
TTCAGGAGCAAGGTATTCGT+GGG 0.563447 8:+1273501 None:intergenic
CTTGCAGTCGCTGCCGTGTG+TGG 0.564039 8:+1276047 None:intergenic
CCATCACCAAACAAGAGAAA+CGG 0.565842 8:+1274785 None:intergenic
ACCTACACACTTTAAGGCAG+CGG 0.566025 8:-1274744 MsaT041065.1:CDS
GCCGCGGATCAGATCCCTGC+TGG 0.566460 8:+1273306 None:intergenic
AAGTCAGAGACTAAATGGGC+AGG 0.568145 8:-1276012 MsaT041065.1:CDS
CAGTACTAGTAAGAGGATGT+CGG 0.571745 8:-1273080 MsaT041065.1:CDS
AGATAGTATTGGTGTTGTCA+AGG 0.574128 8:-1275313 MsaT041065.1:CDS
TCCAGGAAAGGACCCTTCAT+GGG 0.574752 8:+1275573 None:intergenic
TGATACAGATCTTATGAGAA+CGG 0.575155 8:-1275652 MsaT041065.1:CDS
TTTCCTCGGAATCTGGAGCA+AGG 0.576545 8:+1275403 None:intergenic
AGAAACTTTGATAGCACTAA+GGG 0.577344 8:-1275213 MsaT041065.1:CDS
GGTTGTATGCATACTGATGT+TGG 0.577407 8:+1273664 None:intergenic
TTGGTTTCTTCCCGGTAACA+CGG 0.578900 8:+1275538 None:intergenic
CTACGTTGAAAAGCGTAGCA+CGG 0.581312 8:+1273374 None:intergenic
GTTTCCCGACCCTTTGAAAG+GGG 0.581775 8:+1273396 None:intergenic
TTTCTTTGAAGGTGTAAACT+GGG 0.582156 8:-1273215 MsaT041065.1:CDS
GGGTTGGCAGTACTAGTAAG+AGG 0.582737 8:-1273087 MsaT041065.1:CDS
TTACTCAAACGACTTGGATG+TGG 0.585897 8:-1274991 MsaT041065.1:CDS
GACCCTTCAAAACGGGCTGG+TGG 0.586601 8:-1273718 MsaT041065.1:CDS
GCATTCCCATTAGGTGTAGG+AGG 0.587144 8:+1275354 None:intergenic
GGTGACCCTTCAAAACGGGC+TGG 0.587637 8:-1273721 MsaT041065.1:CDS
GCCCGTTCTATGTCCTTCGT+CGG 0.587999 8:-1273526 MsaT041065.1:CDS
AGTCTGCTGGAAGGAAACCC+AGG 0.588599 8:+1273577 None:intergenic
GATGTTGGCTCAATACAAGC+AGG 0.588948 8:+1273679 None:intergenic
AGACGAGGAATAAAACATGC+AGG 0.589247 8:+1273643 None:intergenic
CTGGCATTCCCATTAGGTGT+AGG 0.589407 8:+1275351 None:intergenic
CCATGTCCGAGTAGGCTCAA+AGG 0.589610 8:+1275812 None:intergenic
GGTGGTCCAACCTTCATTGG+TGG 0.590386 8:+1273124 None:intergenic
GAAGCTGACTAGAGCACAGA+CGG 0.590727 8:-1274875 MsaT041065.1:CDS
AGCACTAAGGGTAGTGTAAG+GGG 0.591563 8:-1275201 MsaT041065.1:CDS
TCTCAGAGCTGAGTGGAACT+CGG 0.592698 8:-1274948 MsaT041065.1:CDS
TAGCACTAAGGGTAGTGTAA+GGG 0.595933 8:-1275202 MsaT041065.1:CDS
AAAGTGTGTAGGTCACCTCC+GGG 0.599022 8:+1274754 None:intergenic
GTATGATGTAGACACATTGA+AGG 0.599759 8:-1275745 MsaT041065.1:CDS
GAAGATATTCAAGAGCAAGC+AGG 0.600708 8:+1273878 None:intergenic
TGTGATATTTAGACATGGAG+AGG 0.601193 8:-1276124 None:intergenic
TACCGACGAAGGACATAGAA+CGG 0.601467 8:+1273524 None:intergenic
ATACTATCTATACTACTATG+TGG 0.601696 8:+1275327 None:intergenic
TTCAACAAGACTTTCTTGAG+GGG 0.604893 8:+1275500 None:intergenic
TCATAACCTCTAACAAGAGT+AGG 0.607050 8:+1273745 None:intergenic
TGCAACCAGTTATGCCAGCA+GGG 0.607156 8:-1273320 MsaT041065.1:CDS
AGCTCTGGAAGTCTGCTGGA+AGG 0.607447 8:+1273568 None:intergenic
CCTGAAATTATCAAAGGGGA+AGG 0.607684 8:-1273484 MsaT041065.1:CDS
AGGCAAAACAGTACATCTGA+GGG 0.613764 8:+1273765 None:intergenic
TAGGCAAAACAGTACATCTG+AGG 0.614710 8:+1273764 None:intergenic
GAATTGAATCAATTGTCGCA+GGG 0.615427 8:-1275957 MsaT041065.1:CDS
CATCTCGTAATCGGACGGCA+AGG 0.615700 8:+1275040 None:intergenic
ATTTCTCTGAATATGCTGCT+CGG 0.616304 8:-1274708 MsaT041065.1:intron
TGGCTCAGTTGTCAAATGCA+CGG 0.623783 8:-1275893 MsaT041065.1:CDS
GTTGAAGAACTGAATGACAC+GGG 0.624022 8:-1275483 MsaT041065.1:CDS
TCTTCAACAAGACTTTCTTG+AGG 0.627306 8:+1275498 None:intergenic
ACCAGAAGTGCCAAGACCAG+TGG 0.629425 8:-1273170 MsaT041065.1:CDS
GGCAAGGATAGCATTCCACC+TGG 0.629654 8:+1275056 None:intergenic
AGAACGGTTTATGTACCGAT+AGG 0.630015 8:-1275636 MsaT041065.1:CDS
GTATTCGTGGGTACCGACGA+AGG 0.630369 8:+1273513 None:intergenic
CTGAGCCACTTCTCTGATCG+AGG 0.631057 8:+1275908 None:intergenic
ATTGAGAGATCTTCCAGGAA+AGG 0.631186 8:+1275561 None:intergenic
TTTGGCCTCGATCAGAGAAG+TGG 0.631283 8:-1275913 MsaT041065.1:CDS
ACAAAGTTGGAAGAAATGGA+TGG 0.634189 8:+1274827 None:intergenic
TCTCCTTGCTCCAGATTCCG+AGG 0.636947 8:-1275406 MsaT041065.1:CDS
CTTGCCGTCCGATTACGAGA+TGG 0.637071 8:-1275039 MsaT041065.1:CDS
AATTCCATCTCGTAATCGGA+CGG 0.637708 8:+1275035 None:intergenic
AGCAGCGATTCGTTTGAGGA+CGG 0.638628 8:-1275720 MsaT041065.1:CDS
GGAAGCCAAGAGCTGAACCT+GGG 0.638723 8:-1273594 MsaT041065.1:CDS
CATCGTCTTGGGGTTAAGAG+AGG 0.639049 8:-1273262 MsaT041065.1:CDS
ATGGAAGTGCAGTTGACTGG+TGG 0.640074 8:-1273459 MsaT041065.1:CDS
GCCAGCAGGGATCTGATCCG+CGG 0.644092 8:-1273307 MsaT041065.1:CDS
GGCCACTGCTATCACTTGCA+CGG 0.646241 8:+1275145 None:intergenic
AGTGATGCAATGACCAGCGA+TGG 0.649037 8:-1275252 MsaT041065.1:CDS
ACCCCGACAGCATCAACTGG+TGG 0.652680 8:+1273106 None:intergenic
ACCACCAGTTGATGCTGTCG+GGG 0.654905 8:-1273107 MsaT041065.1:CDS
CTAGCACCGGCAAATAAAGT+CGG 0.655368 8:+1275693 None:intergenic
TCGAGAACCTGCAAAAGGCG+AGG 0.656917 8:+1275452 None:intergenic
TCTGTATCAACAGGTTCTGG+GGG 0.657501 8:+1275666 None:intergenic
ACTCTTGTTAGAGGTTATGA+CGG 0.658841 8:-1273742 MsaT041065.1:CDS
TGTTGAAGAACTGAATGACA+CGG 0.658914 8:-1275484 MsaT041065.1:CDS
GAATAATGAAATGAAGTCTG+GGG 0.660609 8:-1273056 MsaT041065.1:CDS
AATGTGTTGGTTCGAGACGA+TGG 0.660909 8:-1273817 MsaT041065.1:CDS
GTATATCTCTCAGAGCTGAG+TGG 0.665830 8:-1274955 MsaT041065.1:CDS
TGCTCCTGAAATTATCAAAG+GGG 0.668510 8:-1273488 MsaT041065.1:CDS
TTAACCCCAAGACGATGTTG+CGG 0.679035 8:+1273268 None:intergenic
GCTCTTTCACGAGTAAGCCG+CGG 0.679500 8:+1273290 None:intergenic
AGCCGTGCAAGTGATAGCAG+TGG 0.682214 8:-1275147 MsaT041065.1:CDS
AATAATGAAATGAAGTCTGG+GGG 0.682833 8:-1273055 MsaT041065.1:CDS
GGTTGAGGTATCACCACACA+CGG 0.685172 8:-1276060 MsaT041065.1:CDS
GCCGCTGCCTTAAAGTGTGT+AGG 0.687998 8:+1274743 None:intergenic
ACAAAGGAAATGATCCCAGG+TGG 0.691663 8:-1275071 MsaT041065.1:CDS
GCAAGGATAGCATTCCACCT+GGG 0.693466 8:+1275057 None:intergenic
CACCAAACAAGAGAAACGGT+CGG 0.703675 8:+1274789 None:intergenic
AGTGCCAATAAGCCTCACAA+AGG 0.712756 8:-1275087 MsaT041065.1:CDS
GTACTAGTAAGAGGATGTCG+GGG 0.718551 8:-1273078 MsaT041065.1:CDS
AGAGCCGCAACATCGTCTTG+GGG 0.734595 8:-1273272 MsaT041065.1:CDS
GTGATGGAATATTGTCCCGG+AGG 0.741667 8:-1274769 MsaT041065.1:CDS
TTGAAGAACTGAATGACACG+GGG 0.749290 8:-1275482 MsaT041065.1:CDS
TCCAGTTACTGTCATCACTG+AGG 0.753388 8:+1275124 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 1273027 1276132 1273027 ID=MsaG041065
Chr8 mRNA 1273027 1276132 1273027 ID=MsaT041065.1;Parent=MsaG041065
Chr8 exon 1273027 1273918 1273027 ID=MsaT041065.1.exon2;Parent=MsaT041065.1
Chr8 CDS 1273027 1273918 1273027 ID=cds.MsaT041065.1;Parent=MsaT041065.1
Chr8 exon 1274709 1276132 1274709 ID=MsaT041065.1.exon1;Parent=MsaT041065.1
Chr8 CDS 1274709 1276132 1274709 ID=cds.MsaT041065.1;Parent=MsaT041065.1
Gene Sequence

>MsaT041065.1

ATGGAGAGGTATTCAGAGTCAAAAGTACATCCTCGAAACTTGCCGATTCTGGTTGAGGTATCACCACACACGGCAGCGACTGCAAGAGATGTAGGTCAAAGTCAGAGACTAAATGGGCAGGAGTTTTCAAATGCTAGGTGGATTTCAGCTAGAGAATTGAATCAATTGTCGCAGGGAAGGGATGTGCCTATGACACGTTTGGCCTCGATCAGAGAAGTGGCTCAGTTGTCAAATGCACGGATTTTATTGGTTCAAGATGATATGGAATTTGATACTAGAGAGTCTCCTGAGTCTATCTCCTTTGAGCCTACTCGGACATGGAAAGGAAAGACGTCTTTACTTGAAGTTGAAGGAGAAGATCTGATGTATGATGTAGACACATTGAAGGAAAGCAGCGATTCGTTTGAGGACGGTGATCCGACTTTATTTGCCGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAACAAATCTGAGTCCGGATGCTTAATTAAGAACTTGCCCATGAAGGGTCCTTTCCTGGAAGATCTCTCAATCCGTGTTACCGGGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGAAAGTCTTGTTGAAGAACTGAATGACACGGGGAACATATCCTCGCCTTTTGCAGGTTCTCGAGCGTCTCAGAATACTGAGAACTCTCTCCTTGCTCCAGATTCCGAGGAAAAAGAATGTGTTTGGGACGCTTCTTTGCCTCCTACACCTAATGGGAATGCCAGTCCACATAGTAGTATAGATAGTATTGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGTAGTGATGCAATGACCAGCGATGGCATGCTTAGTTTAGATAGAAACTTTGATAGCACTAAGGGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGCTAGCCGTGCAAGTGATAGCAGTGGCCTCAGTGATGACAGTAACTGGAGCAACCTTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCCAGGTGGAATGCTATCCTTGCCGTCCGATTACGAGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCTATGAAGGTTATGGACAAGGCGTCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACGGAGAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACCGACCGTTTCTCTTGTTTGGTGATGGAATATTGTCCCGGAGGTGACCTACACACTTTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCTCGATTTTATGCTGCTGAAGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTTCGAGACGATGGTCACATAATGCTTTCAGATTTCGATCTTTCCCTCAGATGTACTGTTTTGCCTACTCTTGTTAGAGGTTATGACGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGTATGCATACAACCTGCATGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGGAAGCCAAGAGCTGAACCTGGGTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCTGAGCCTACTGCTGCCCGTTCTATGTCCTTCGTCGGTACCCACGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATATTCTTGCATGAACTGTTATACGGTAAAACCCCTTTCAAAGGGTCGGGAAACCGTGCTACGCTTTTCAACGTAGTAGGTCAGCAGCTCAAATTTCCCGAATCACCTGCAACCAGTTATGCCAGCAGGGATCTGATCCGCGGCTTACTCGTGAAAGAGCCGCAACATCGTCTTGGGGTTAAGAGAGGTGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTAAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGACCAGTGGAAAATGAGCCGCCGCCACCGCCACCACCAATGAAGGTTGGACCACCAGTTGATGCTGTCGGGGTTGGCAGTACTAGTAAGAGGATGTCGGGGAATAATGAAATGAAGTCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAG
Protein sequence

>MsaT041065.1

MERYSESKVHPRNLPILVEVSPHTAATARDVGQSQRLNGQEFSNARWISARELNQLSQGRDVPMTRLASIREVAQLSNARILLVQDDMEFDTRESPESISFEPTRTWKGKTSLLEVEGEDLMYDVDTLKESSDSFEDGDPTLFAGASHPPEPVDTDLMRTVYVPIGQNKSESGCLIKNLPMKGPFLEDLSIRVTGKKPSPIVLSPQESLVEELNDTGNISSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPNGNASPHSSIDSIGVVKAMSIANSCASTYRSDAMTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDGDPSKRAGGAFCVQPACIEPTSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPPMKVGPPVDAVGVGSTSKRMSGNNEMKSGGKYLDFEFF*