AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG041600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG041600 MtrunA17_Chr8g0342481 84.108 409 50 3 1 402 1 401 0.0 687
MsaG041600 MtrunA17_Chr8g0342481 50.667 150 61 7 297 438 153 297 9.09e-23 100
MsaG041600 MtrunA17_Chr8g0342541 68.977 303 74 10 1 296 1 290 9.09e-128 375
MsaG041600 MtrunA17_Chr8g0342541 53.883 206 67 10 297 485 153 347 2.08e-40 148
MsaG041600 MtrunA17_Chr8g0342521 67.550 302 79 9 1 296 1 289 3.83e-124 365
MsaG041600 MtrunA17_Chr8g0342521 46.639 238 97 10 268 485 120 347 1.45e-38 143
MsaG041600 MtrunA17_Chr2g0330041 56.869 313 102 16 1 286 1 307 1.64e-89 279
MsaG041600 MtrunA17_Chr2g0309911 76.613 124 27 2 1 124 1 122 7.82e-63 207
MsaG041600 MtrunA17_Chr1g0193371 71.774 124 34 1 1 124 1 123 1.05e-59 200
MsaG041600 MtrunA17_Chr1g0193801 70.968 124 35 1 1 124 1 123 1.33e-59 201
MsaG041600 MtrunA17_Chr7g0270891 72.581 124 33 1 1 124 1 123 1.65e-59 200
MsaG041600 MtrunA17_Chr8g0342461 95.556 90 4 0 1 90 1 90 3.47e-59 191
MsaG041600 MtrunA17_Chr8g0342471 94.444 90 5 0 1 90 1 90 1.66e-58 189
MsaG041600 MtrunA17_Chr4g0058631 60.390 154 59 2 1 153 1 153 3.63e-58 196
MsaG041600 MtrunA17_Chr1g0211161 70.732 123 35 1 3 125 4 125 9.49e-58 191
MsaG041600 MtrunA17_Chr3g0117091 70.400 125 36 1 1 125 1 124 1.95e-57 194
MsaG041600 MtrunA17_Chr5g0397231 72.973 111 29 1 1 111 1 110 1.74e-55 188
MsaG041600 MtrunA17_Chr7g0271241 72.581 124 33 1 1 124 1 123 2.40e-55 189
MsaG041600 MtrunA17_Chr8g0387421 70.085 117 34 1 1 117 1 116 4.74e-55 186
MsaG041600 MtrunA17_Chr8g0342531 86.667 90 11 1 1 90 1 89 4.15e-51 171
MsaG041600 MtrunA17_Chr8g0342511 87.500 88 10 1 1 88 1 87 5.13e-51 168
MsaG041600 MtrunA17_Chr8g0385321 61.600 125 47 1 1 125 1 124 1.91e-49 172
MsaG041600 MtrunA17_Chr4g0037141 56.835 139 53 2 1 139 1 132 3.25e-49 170
MsaG041600 MtrunA17_Chr5g0435101 63.025 119 43 1 6 124 5 122 8.98e-49 166
MsaG041600 MtrunA17_Chr3g0088461 68.807 109 33 1 9 117 19 126 9.08e-49 171
MsaG041600 MtrunA17_Chr3g0131121 60.484 124 48 1 1 124 1 123 4.26e-48 167
MsaG041600 MtrunA17_Chr4g0032401 69.159 107 32 1 11 117 16 121 3.91e-47 166
MsaG041600 MtrunA17_Chr3g0115821 57.258 124 52 1 1 124 1 123 5.08e-47 166
MsaG041600 MtrunA17_Chr4g0057031 60.484 124 48 1 1 124 1 123 5.23e-47 164
MsaG041600 MtrunA17_Chr2g0328771 67.925 106 33 1 12 117 20 124 1.12e-46 164
MsaG041600 MtrunA17_Chr3g0110351 60.484 124 48 1 1 124 1 123 1.65e-46 164
MsaG041600 MtrunA17_Chr1g0203411 60.684 117 45 1 1 117 1 116 2.53e-46 162
MsaG041600 MtrunA17_Chr5g0410961 58.871 124 50 1 1 124 1 123 4.42e-46 164
MsaG041600 MtrunA17_Chr5g0434571 60.484 124 48 1 1 124 37 159 5.45e-46 164
MsaG041600 MtrunA17_Chr4g0039971 56.452 124 53 1 1 124 2 124 9.75e-46 163
MsaG041600 MtrunA17_Chr2g0323351 58.678 121 47 2 1 120 1 119 1.55e-45 159
MsaG041600 MtrunA17_Chr4g0044421 60.484 124 48 1 1 124 1 123 2.02e-45 157
MsaG041600 MtrunA17_Chr1g0151941 46.875 160 85 0 1 160 1 160 2.56e-45 159
MsaG041600 MtrunA17_Chr4g0048511 56.716 134 55 3 1 132 1 133 2.81e-45 162
MsaG041600 MtrunA17_Chr7g0274581 51.049 143 62 2 1 143 1 135 4.42e-45 157
MsaG041600 MtrunA17_Chr2g0281071 58.400 125 50 2 1 124 1 124 4.87e-45 160
MsaG041600 MtrunA17_Chr2g0323411 44.560 193 99 4 1 191 1 187 5.55e-45 160
MsaG041600 MtrunA17_Chr6g0453471 55.645 124 54 1 1 124 1 123 2.94e-44 159
MsaG041600 MtrunA17_Chr2g0311221 63.208 106 38 1 6 111 8 112 3.36e-44 158
MsaG041600 MtrunA17_Chr1g0203441 59.836 122 48 1 8 129 9 129 4.16e-44 156
MsaG041600 MtrunA17_Chr4g0042671 55.200 125 55 1 1 125 1 124 6.58e-44 159
MsaG041600 MtrunA17_Chr7g0217741 49.673 153 66 3 1 153 1 142 7.32e-44 157
MsaG041600 MtrunA17_Chr7g0228891 61.538 117 44 1 1 117 1 116 8.78e-44 155
MsaG041600 MtrunA17_Chr1g0187761 60.684 117 45 1 1 117 1 116 9.80e-44 155
MsaG041600 MtrunA17_Chr4g0070611 57.265 117 49 1 1 117 1 116 1.05e-43 156
MsaG041600 MtrunA17_Chr4g0070641 57.265 117 49 1 1 117 1 116 2.35e-43 150
MsaG041600 MtrunA17_Chr6g0470971 60.504 119 46 1 9 127 11 128 2.45e-43 154
MsaG041600 MtrunA17_Chr4g0022901 49.342 152 66 3 5 147 6 155 3.64e-43 154
MsaG041600 MtrunA17_Chr6g0452271 57.258 124 52 1 1 124 1 123 3.73e-43 155
MsaG041600 MtrunA17_Chr8g0349261 56.000 125 54 1 1 124 1 125 5.84e-43 154
MsaG041600 MtrunA17_Chr4g0022931 58.772 114 44 2 5 117 6 117 5.92e-43 153
MsaG041600 MtrunA17_Chr5g0395281 60.177 113 44 1 12 124 12 123 7.32e-43 154
MsaG041600 MtrunA17_Chr1g0167661 56.780 118 50 1 1 118 1 117 1.68e-42 151
MsaG041600 MtrunA17_Chr3g0121241 56.303 119 51 1 6 124 36 153 5.73e-42 151
MsaG041600 MtrunA17_Chr7g0261281 56.410 117 50 1 1 117 1 116 1.68e-41 149
MsaG041600 MtrunA17_Chr7g0275911 57.265 117 49 1 1 117 1 116 1.77e-41 149
MsaG041600 MtrunA17_Chr3g0103281 56.154 130 55 2 1 129 1 129 1.80e-41 150
MsaG041600 MtrunA17_Chr1g0167691 55.932 118 51 1 1 118 1 117 1.93e-41 148
MsaG041600 MtrunA17_Chr1g0194951 39.091 220 96 5 1 217 1 185 3.01e-41 151
MsaG041600 MtrunA17_Chr8g0346561 55.556 117 51 1 1 117 1 116 1.14e-40 148
MsaG041600 MtrunA17_Chr4g0022911 54.032 124 54 3 1 123 1 122 1.50e-40 147
MsaG041600 MtrunA17_Chr4g0028311 54.622 119 54 0 1 119 1 119 3.79e-40 147
MsaG041600 MtrunA17_Chr1g0152011 53.782 119 55 0 1 119 1 119 5.59e-40 147
MsaG041600 MtrunA17_Chr4g0068061 51.145 131 61 2 1 129 1 130 5.74e-40 147
MsaG041600 MtrunA17_Chr5g0400821 52.941 119 56 0 1 119 1 119 5.31e-39 144
MsaG041600 MtrunA17_Chr8g0343831 57.273 110 46 1 8 117 4 112 7.03e-39 142
MsaG041600 MtrunA17_Chr3g0135311 51.261 119 58 0 1 119 1 119 1.19e-38 144
MsaG041600 MtrunA17_Chr4g0055981 58.716 109 44 1 8 116 51 158 2.11e-38 139
MsaG041600 MtrunA17_Chr7g0264641 52.101 119 57 0 1 119 1 119 3.15e-38 140
MsaG041600 MtrunA17_Chr4g0054391 57.273 110 47 0 1 110 1 110 3.97e-38 140
MsaG041600 MtrunA17_Chr2g0327351 54.955 111 50 0 1 111 1 111 8.79e-38 140
MsaG041600 MtrunA17_Chr6g0450101 56.757 111 47 1 11 121 13 122 2.62e-37 136
MsaG041600 MtrunA17_Chr7g0228231 55.556 117 49 2 1 115 1 116 2.80e-37 136
MsaG041600 MtrunA17_Chr7g0217221 52.991 117 54 1 1 117 1 116 5.30e-37 137
MsaG041600 MtrunA17_Chr7g0240821 60.396 101 39 1 17 117 6 105 5.35e-37 135
MsaG041600 MtrunA17_Chr5g0417821 56.140 114 49 1 12 125 7 119 6.37e-37 137
MsaG041600 MtrunA17_Chr7g0269831 56.303 119 51 1 1 119 1 118 1.91e-36 138
MsaG041600 MtrunA17_Chr4g0022881 54.206 107 48 1 9 115 9 114 2.03e-36 134
MsaG041600 MtrunA17_Chr3g0092401 52.991 117 54 1 1 117 2 117 9.44e-36 135
MsaG041600 MtrunA17_Chr4g0072751 52.252 111 53 0 1 111 1 111 1.17e-35 135
MsaG041600 MtrunA17_Chr1g0186061 51.786 112 53 1 5 116 13 123 3.04e-35 132
MsaG041600 MtrunA17_Chr1g0209661 50.000 126 60 2 8 131 21 145 3.26e-35 133
MsaG041600 MtrunA17_Chr1g0168661 52.212 113 53 1 4 116 13 124 4.32e-35 131
MsaG041600 MtrunA17_Chr4g0060721 49.167 120 60 1 1 120 2 120 8.14e-35 133
MsaG041600 MtrunA17_Chr6g0487491 48.148 135 62 1 1 127 1 135 1.56e-34 130
MsaG041600 MtrunA17_Chr6g0453211 53.153 111 51 1 1 111 1 110 1.64e-34 131
MsaG041600 MtrunA17_Chr4g0022891 55.238 105 46 1 9 113 9 112 1.70e-34 129
MsaG041600 MtrunA17_Chr7g0254411 50.427 117 57 1 1 117 1 116 2.00e-34 132
MsaG041600 MtrunA17_Chr1g0194291 53.333 105 48 1 12 116 21 124 2.59e-34 129
MsaG041600 MtrunA17_Chr1g0180391 51.887 106 50 1 12 117 19 123 4.48e-34 128
MsaG041600 MtrunA17_Chr7g0220341 54.545 110 47 2 12 119 25 133 2.44e-33 127
MsaG041600 MtrunA17_Chr1g0154031 53.333 105 48 1 12 116 76 179 2.57e-33 130
MsaG041600 MtrunA17_Chr5g0434931 51.351 111 53 1 12 122 35 144 2.62e-33 127
MsaG041600 MtrunA17_Chr3g0099131 53.333 105 48 1 12 116 41 144 2.63e-33 132
MsaG041600 MtrunA17_Chr4g0042611 57.303 89 37 1 1 89 1 88 2.86e-33 121
MsaG041600 MtrunA17_Chr5g0434911 51.327 113 54 1 7 119 16 127 3.00e-33 127
MsaG041600 MtrunA17_Chr1g0194301 49.524 105 52 1 12 116 33 136 4.21e-33 127
MsaG041600 MtrunA17_Chr8g0354661 52.381 105 49 1 12 116 37 140 2.11e-32 130
MsaG041600 MtrunA17_Chr5g0434831 52.336 107 50 1 12 118 7 112 2.32e-32 122
MsaG041600 MtrunA17_Chr2g0327821 49.074 108 54 1 9 116 3 109 4.75e-32 122
MsaG041600 MtrunA17_Chr7g0247131 66.667 81 27 0 44 124 9 89 5.31e-32 123
MsaG041600 MtrunA17_Chr3g0080861 50.476 105 51 1 12 116 37 140 8.67e-32 127
MsaG041600 MtrunA17_Chr7g0228991 52.778 108 50 1 12 119 29 135 1.01e-31 123
MsaG041600 MtrunA17_Chr8g0360111 53.398 103 47 1 12 114 25 126 4.52e-31 120
MsaG041600 MtrunA17_Chr4g0030881 46.610 118 55 2 6 116 1 117 8.45e-31 120
MsaG041600 MtrunA17_Chr2g0322521 52.294 109 51 1 8 116 25 132 3.89e-30 121
MsaG041600 MtrunA17_Chr5g0434841 49.533 107 53 1 12 118 20 125 5.72e-30 119
MsaG041600 MtrunA17_Chr2g0323321 56.180 89 34 2 7 93 6 91 2.29e-29 111
MsaG041600 MtrunA17_Chr4g0068921 52.885 104 48 1 12 115 24 126 5.93e-29 113
MsaG041600 MtrunA17_Chr8g0334881 51.376 109 51 2 4 111 2 109 7.95e-29 115
MsaG041600 MtrunA17_Chr1g0192411 50.000 106 52 1 11 116 11 115 1.02e-28 117
MsaG041600 MtrunA17_Chr2g0293911 52.885 104 48 1 12 115 24 126 1.55e-28 115
MsaG041600 MtrunA17_Chr5g0440781 48.571 105 52 2 12 115 12 115 1.48e-27 108
MsaG041600 MtrunA17_Chr4g0013361 53.922 102 43 3 12 111 10 109 2.08e-27 111
MsaG041600 MtrunA17_Chr5g0441141 48.571 105 52 2 12 115 12 115 3.47e-27 110
MsaG041600 MtrunA17_Chr5g0440761 48.571 105 52 2 12 115 12 115 3.90e-27 110
MsaG041600 MtrunA17_Chr2g0294811 52.809 89 41 1 1 89 1 88 1.89e-26 103
MsaG041600 MtrunA17_Chr5g0429661 46.602 103 53 1 14 116 122 222 1.32e-25 107
MsaG041600 MtrunA17_Chr5g0441131 44.643 112 60 2 5 115 2 112 2.82e-25 102
MsaG041600 MtrunA17_Chr5g0395221 56.790 81 34 1 9 89 9 88 3.44e-25 99.0
MsaG041600 MtrunA17_Chr5g0434901 61.194 67 26 0 47 113 7 73 2.84e-24 97.4
MsaG041600 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 3 72 3.72e-24 100
MsaG041600 MtrunA17_Chr6g0480581 49.038 104 47 4 14 115 4 103 5.65e-24 100
MsaG041600 MtrunA17_Chr7g0238631 48.571 105 50 3 14 117 113 214 9.16e-24 104
MsaG041600 MtrunA17_Chr7g0229131 56.000 75 33 0 44 118 3 77 1.88e-23 97.1
MsaG041600 MtrunA17_Chr3g0099141 51.807 83 39 1 12 94 40 121 2.60e-23 95.5
MsaG041600 MtrunA17_Chr4g0008551 45.794 107 54 3 14 119 38 141 3.15e-23 100
MsaG041600 MtrunA17_Chr4g0053431 48.544 103 51 2 14 116 5 105 1.93e-22 97.1
MsaG041600 MtrunA17_Chr3g0139671 39.286 140 68 4 14 152 85 208 2.73e-22 100
MsaG041600 MtrunA17_Chr4g0042501 43.478 115 58 2 2 116 98 205 4.99e-22 98.2
MsaG041600 MtrunA17_Chr5g0417621 45.283 106 56 1 11 116 131 234 5.47e-22 98.2
MsaG041600 MtrunA17_Chr6g0454921 45.299 117 57 4 14 126 15 128 7.74e-22 93.6
MsaG041600 MtrunA17_Chr1g0157731 44.762 105 54 3 14 117 91 192 2.67e-21 97.8
MsaG041600 MtrunA17_Chr5g0401731 47.115 104 51 3 14 116 15 115 2.97e-21 94.7
MsaG041600 MtrunA17_Chr4g0058991 43.119 109 58 3 9 116 204 309 2.98e-21 96.3
MsaG041600 MtrunA17_Chr3g0117511 42.342 111 58 4 9 116 176 283 7.95e-21 94.7
MsaG041600 MtrunA17_Chr3g0125801 47.573 103 52 1 14 116 16 116 8.46e-21 92.4
MsaG041600 MtrunA17_Chr1g0177901 50.000 88 42 2 25 112 5 90 1.75e-20 89.7
MsaG041600 MtrunA17_Chr7g0228531 43.689 103 55 3 14 116 220 319 3.80e-20 92.8
MsaG041600 MtrunA17_Chr6g0453751 48.936 94 36 3 13 94 17 110 5.39e-20 85.9
MsaG041600 MtrunA17_Chr3g0133601 45.192 104 53 3 14 116 37 137 3.45e-19 86.7
MsaG041600 MtrunA17_Chr6g0460661 42.268 97 54 1 11 107 13 107 4.46e-19 84.3
MsaG041600 MtrunA17_Chr5g0425591 44.565 92 49 2 5 95 2 92 4.99e-19 82.0
MsaG041600 MtrunA17_Chr3g0093811 43.299 97 54 1 44 139 13 109 8.45e-19 86.3
MsaG041600 MtrunA17_Chr5g0437321 44.554 101 52 3 14 113 19 116 8.96e-19 86.7
MsaG041600 MtrunA17_Chr7g0228401 44.000 100 52 3 25 124 290 385 1.87e-18 88.2
MsaG041600 MtrunA17_Chr5g0397841 43.750 96 50 3 17 111 113 205 1.06e-17 85.5
MsaG041600 MtrunA17_Chr6g0460671 41.905 105 55 4 14 116 99 199 1.93e-17 83.6
MsaG041600 MtrunA17_Chr7g0254261 41.905 105 57 3 13 116 88 189 1.97e-17 83.6
MsaG041600 MtrunA17_Chr7g0228481 40.952 105 57 4 14 118 220 319 8.21e-17 82.4
MsaG041600 MtrunA17_Chr7g0238651 40.404 99 56 2 13 109 6 103 1.60e-15 78.2
MsaG041600 MtrunA17_Chr7g0233061 35.354 99 60 3 14 112 180 274 2.51e-15 77.4
MsaG041600 MtrunA17_Chr5g0416341 39.000 100 59 2 17 116 29 126 1.25e-14 75.9
MsaG041600 MtrunA17_Chr8g0362231 37.736 106 63 3 17 122 25 127 7.10e-14 73.6
MsaG041600 MtrunA17_Chr5g0434871 57.778 45 19 0 75 119 2 46 4.93e-13 64.3
MsaG041600 MtrunA17_Chr1g0193901 47.619 63 31 2 8 69 7 68 2.30e-12 63.5
MsaG041600 MtrunA17_Chr1g0193891 47.619 63 31 2 8 69 7 68 2.30e-12 63.5
MsaG041600 MtrunA17_Chr1g0193871 47.619 63 31 2 8 69 7 68 2.30e-12 63.5
MsaG041600 MtrunA17_Chr1g0193881 47.619 63 31 2 8 69 7 68 2.30e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG041600 AT3G13890.2 84.874 119 17 1 1 119 1 118 5.70e-67 219
MsaG041600 AT3G13890.1 78.906 128 17 2 1 119 1 127 7.80e-64 211
MsaG041600 AT3G12720.1 77.869 122 26 1 4 125 14 134 2.76e-63 208
MsaG041600 AT1G57560.1 66.434 143 41 2 1 143 1 136 8.99e-62 204
MsaG041600 AT1G57560.2 72.581 124 33 1 1 124 1 123 7.07e-61 201
MsaG041600 AT5G26660.1 72.800 125 33 1 1 125 1 124 8.91e-61 203
MsaG041600 AT4G01680.3 72.581 124 33 1 1 124 1 123 2.81e-60 198
MsaG041600 AT1G09540.1 67.361 144 38 3 1 144 1 135 8.34e-60 201
MsaG041600 AT4G01680.1 72.581 124 33 1 1 124 1 123 1.10e-59 199
MsaG041600 AT1G63910.1 72.650 117 31 1 1 117 1 116 2.88e-57 194
MsaG041600 AT4G01680.2 66.176 136 33 2 1 124 1 135 3.42e-56 191
MsaG041600 AT4G12350.1 58.042 143 53 2 1 143 1 136 1.34e-51 177
MsaG041600 AT2G16720.1 60.000 125 49 1 1 125 1 124 3.96e-50 172
MsaG041600 AT4G34990.1 60.000 125 49 1 1 125 1 124 6.74e-49 169
MsaG041600 AT4G38620.1 46.961 181 81 5 1 180 1 167 1.70e-48 168
MsaG041600 AT4G21440.1 49.412 170 78 4 1 164 1 168 1.98e-48 170
MsaG041600 AT4G22680.1 61.290 124 47 1 1 124 1 123 2.74e-48 167
MsaG041600 AT1G22640.1 59.677 124 49 1 1 124 1 123 7.39e-48 166
MsaG041600 AT5G12870.1 69.444 108 32 1 10 117 16 122 1.93e-47 166
MsaG041600 AT4G09460.1 58.871 124 50 1 1 124 1 123 2.67e-47 164
MsaG041600 AT3G08500.1 65.254 118 37 2 3 117 18 134 3.80e-47 167
MsaG041600 AT1G66230.1 53.947 152 63 2 1 152 1 145 1.66e-46 163
MsaG041600 AT4G05100.1 58.400 125 50 2 1 124 1 124 2.92e-46 164
MsaG041600 AT3G02940.2 57.258 124 52 1 1 124 1 123 3.20e-46 163
MsaG041600 AT3G02940.1 57.258 124 52 1 1 124 1 123 5.85e-46 163
MsaG041600 AT3G02940.3 57.258 124 52 1 1 124 1 123 5.85e-46 163
MsaG041600 AT5G16600.1 60.484 124 48 1 1 124 1 123 8.90e-46 162
MsaG041600 AT3G01140.2 56.452 124 53 1 1 124 1 123 9.52e-46 163
MsaG041600 AT1G34670.1 58.065 124 51 1 1 124 1 123 1.07e-45 163
MsaG041600 AT5G15310.4 50.685 146 65 2 1 140 1 145 1.97e-45 159
MsaG041600 AT5G65230.1 59.322 118 47 1 1 118 1 117 2.40e-45 161
MsaG041600 AT3G61250.1 57.258 124 52 1 1 124 1 123 2.63e-45 160
MsaG041600 AT5G54230.1 59.677 124 49 1 1 124 1 123 3.08e-45 161
MsaG041600 AT5G16770.4 46.316 190 92 6 1 188 1 182 3.77e-45 161
MsaG041600 AT5G16770.3 46.316 190 92 6 1 188 1 182 3.77e-45 161
MsaG041600 AT5G15310.1 50.685 146 65 2 1 140 1 145 4.20e-45 160
MsaG041600 AT5G15310.2 50.685 146 65 2 1 140 1 145 5.53e-45 160
MsaG041600 AT4G28110.1 56.452 124 53 1 1 124 1 123 5.74e-45 159
MsaG041600 AT5G16770.1 46.316 190 92 6 1 188 1 182 8.54e-45 160
MsaG041600 AT5G16770.2 46.316 190 92 6 1 188 1 182 8.54e-45 160
MsaG041600 AT3G01140.1 57.983 119 49 1 6 124 49 166 1.28e-44 161
MsaG041600 AT4G17785.2 57.600 125 51 2 1 124 1 124 3.24e-44 159
MsaG041600 AT4G17785.1 57.600 125 51 2 1 124 1 124 4.09e-44 159
MsaG041600 AT1G35515.1 55.645 124 54 1 1 124 1 123 9.04e-44 154
MsaG041600 AT1G79180.1 62.500 112 41 1 6 117 8 118 1.16e-43 156
MsaG041600 AT1G56160.1 62.500 112 41 1 6 117 8 118 1.72e-43 155
MsaG041600 AT5G10280.1 50.714 140 62 3 1 140 1 133 2.31e-43 156
MsaG041600 AT5G56110.1 52.027 148 64 2 1 148 1 141 2.39e-43 156
MsaG041600 AT5G23000.1 58.475 118 49 0 1 118 1 118 2.92e-43 156
MsaG041600 AT5G07690.1 54.032 124 56 1 1 124 1 123 4.28e-43 155
MsaG041600 AT5G07700.1 54.839 124 55 1 1 124 1 123 5.69e-43 155
MsaG041600 AT5G07700.2 54.839 124 55 1 1 124 1 123 5.69e-43 155
MsaG041600 AT2G31180.1 59.829 117 46 1 1 117 1 116 5.69e-43 153
MsaG041600 AT5G52260.1 63.636 110 39 1 9 118 9 117 6.04e-43 153
MsaG041600 AT3G13540.1 51.034 145 67 2 6 147 17 160 8.28e-43 152
MsaG041600 AT5G62320.1 50.735 136 61 1 2 131 3 138 8.57e-43 152
MsaG041600 AT3G23250.1 56.410 117 50 1 1 117 1 116 1.16e-42 153
MsaG041600 AT5G60890.1 48.630 146 68 3 1 146 1 139 1.60e-42 153
MsaG041600 AT1G16490.1 60.870 115 44 1 6 120 8 121 1.61e-42 152
MsaG041600 AT5G49330.1 58.974 117 47 1 1 117 1 116 3.48e-42 153
MsaG041600 AT5G61420.2 52.419 124 58 1 1 124 1 123 6.23e-42 153
MsaG041600 AT3G48920.1 60.185 108 42 1 8 115 14 120 8.48e-42 150
MsaG041600 AT1G06180.1 58.120 117 48 1 1 117 1 116 8.92e-42 149
MsaG041600 AT4G25560.1 63.303 109 39 1 10 118 8 115 1.84e-41 150
MsaG041600 AT5G14340.1 46.914 162 79 2 1 162 13 167 2.50e-41 149
MsaG041600 AT2G47460.1 58.120 117 48 1 1 117 1 116 3.46e-41 151
MsaG041600 AT3G28470.1 46.552 174 85 3 1 174 1 166 4.45e-41 150
MsaG041600 AT1G18570.1 52.000 125 58 2 1 124 1 124 8.82e-41 150
MsaG041600 AT3G12820.1 58.772 114 46 1 6 119 8 120 1.38e-40 146
MsaG041600 AT5G57620.1 53.782 119 55 0 1 119 1 119 1.52e-40 149
MsaG041600 AT1G74080.1 52.419 124 58 1 1 124 1 123 4.73e-39 145
MsaG041600 AT3G62610.1 54.701 117 52 1 1 117 1 116 5.50e-39 145
MsaG041600 AT3G49690.1 52.542 118 56 0 1 118 1 118 5.57e-39 144
MsaG041600 AT3G27810.1 53.390 118 54 1 8 125 16 132 5.67e-39 141
MsaG041600 AT5G65790.1 53.390 118 55 0 1 118 1 118 9.00e-39 145
MsaG041600 AT5G35550.1 59.633 109 43 1 9 117 11 118 1.93e-38 141
MsaG041600 AT2G36890.1 52.101 119 57 0 1 119 1 119 2.09e-38 142
MsaG041600 AT2G36890.2 52.101 119 57 0 1 119 42 160 3.06e-38 142
MsaG041600 AT4G37780.1 52.101 119 57 0 1 119 1 119 4.65e-38 141
MsaG041600 AT3G01530.1 57.547 106 44 1 12 117 25 129 1.39e-37 137
MsaG041600 AT5G14750.1 50.400 125 58 2 14 135 18 141 1.72e-37 137
MsaG041600 AT5G40350.1 56.481 108 46 1 11 118 16 122 3.28e-37 136
MsaG041600 AT1G79180.2 48.276 145 41 2 6 117 8 151 4.35e-37 139
MsaG041600 AT5G52600.1 51.938 129 56 2 8 131 8 135 5.71e-37 135
MsaG041600 AT1G74430.1 50.806 124 60 1 1 124 1 123 1.22e-36 136
MsaG041600 AT5G40330.1 55.238 105 46 1 13 117 13 116 1.49e-36 134
MsaG041600 AT1G74650.1 52.542 118 55 1 1 118 1 117 7.55e-36 136
MsaG041600 AT1G48000.1 53.509 114 50 2 11 122 31 143 7.56e-36 133
MsaG041600 AT3G27920.1 50.450 111 54 1 10 120 12 121 7.91e-36 133
MsaG041600 AT1G18710.1 53.097 113 52 1 12 124 12 123 9.05e-36 134
MsaG041600 AT3G47600.1 52.137 117 55 1 1 117 1 116 1.10e-35 135
MsaG041600 AT5G26660.2 73.750 80 21 0 46 125 14 93 3.24e-35 134
MsaG041600 AT5G62470.2 52.137 117 55 1 1 117 1 116 5.75e-35 134
MsaG041600 AT1G08810.1 50.413 121 59 1 1 121 1 120 7.51e-35 132
MsaG041600 AT3G11440.2 40.805 174 89 5 5 174 31 194 1.56e-34 135
MsaG041600 AT4G13480.1 55.556 108 47 1 9 116 3 109 3.27e-34 129
MsaG041600 AT3G28910.1 51.282 117 56 1 1 117 1 116 4.05e-34 131
MsaG041600 AT3G11440.3 40.805 174 89 5 5 174 31 194 4.60e-34 135
MsaG041600 AT3G11440.4 40.805 174 89 5 5 174 31 194 4.60e-34 135
MsaG041600 AT3G11440.1 40.805 174 89 5 5 174 31 194 4.60e-34 135
MsaG041600 AT3G24310.1 54.054 111 50 1 9 119 15 124 1.78e-33 128
MsaG041600 AT3G30210.1 53.398 103 47 1 13 115 28 129 1.98e-33 128
MsaG041600 AT2G47190.1 48.571 105 53 1 12 116 20 123 2.40e-33 127
MsaG041600 AT5G06100.1 54.286 105 47 1 12 116 32 135 2.60e-33 131
MsaG041600 AT1G68320.1 48.361 122 62 1 10 131 17 137 2.65e-33 128
MsaG041600 AT2G26960.1 51.402 107 51 1 9 115 17 122 3.38e-33 130
MsaG041600 AT5G62470.1 52.137 117 54 2 1 117 1 115 3.41e-33 129
MsaG041600 AT5G06100.5 54.286 105 47 1 12 116 32 135 8.16e-33 131
MsaG041600 AT5G06100.2 54.286 105 47 1 12 116 32 135 8.16e-33 131
MsaG041600 AT5G06100.3 54.286 105 47 1 12 116 32 135 8.16e-33 131
MsaG041600 AT5G06100.4 54.286 105 47 1 12 116 32 135 8.16e-33 131
MsaG041600 AT4G26930.1 49.580 119 57 2 12 130 19 134 1.83e-32 128
MsaG041600 AT1G66370.1 51.376 109 52 1 8 116 4 111 4.97e-32 123
MsaG041600 AT3G53200.1 51.852 108 51 1 9 116 6 112 8.79e-32 122
MsaG041600 AT5G55020.1 50.000 120 51 3 12 124 26 143 8.88e-32 128
MsaG041600 AT1G66380.1 54.128 109 49 1 8 116 4 111 4.47e-31 117
MsaG041600 AT2G32460.2 49.524 105 52 1 12 116 6 109 5.93e-31 125
MsaG041600 AT2G32460.1 46.429 112 59 1 5 116 11 121 5.95e-31 125
MsaG041600 AT5G59780.3 49.074 108 54 1 9 116 5 111 8.83e-31 119
MsaG041600 AT3G06490.1 56.731 104 44 1 12 115 19 121 1.05e-30 121
MsaG041600 AT1G25340.1 50.485 103 50 1 14 116 20 121 4.36e-30 119
MsaG041600 AT3G46130.1 49.541 109 53 2 9 116 5 112 7.79e-30 117
MsaG041600 AT2G26950.1 46.364 110 58 1 2 111 6 114 1.07e-29 120
MsaG041600 AT3G27810.2 58.750 80 33 0 46 125 4 83 2.04e-29 114
MsaG041600 AT3G60460.1 52.830 106 48 2 7 111 6 110 4.56e-29 116
MsaG041600 AT5G49620.1 54.808 104 46 1 12 115 26 128 5.36e-29 116
MsaG041600 AT1G56650.1 54.128 109 49 1 8 116 4 111 1.52e-28 114
MsaG041600 AT5G40350.2 63.014 73 27 0 46 118 5 77 2.92e-28 110
MsaG041600 AT1G66390.1 53.211 109 50 1 8 116 4 111 7.34e-28 112
MsaG041600 AT5G14750.3 63.014 73 27 0 49 121 18 90 8.37e-28 109
MsaG041600 AT5G35550.2 64.865 74 26 0 44 117 48 121 3.28e-27 110
MsaG041600 AT5G40360.1 34.031 191 114 6 9 198 153 332 1.07e-26 111
MsaG041600 AT3G12820.2 61.972 71 27 0 49 119 2 72 1.24e-25 103
MsaG041600 AT5G49620.2 48.305 118 46 2 12 115 26 142 1.43e-25 107
MsaG041600 AT1G25340.2 47.573 103 48 2 14 116 20 116 2.58e-25 105
MsaG041600 AT1G25340.3 47.573 103 48 2 14 116 20 116 4.57e-25 105
MsaG041600 AT3G47600.2 50.000 94 42 1 24 117 22 110 1.74e-24 104
MsaG041600 AT3G46130.3 58.333 72 30 0 45 116 9 80 3.71e-24 100
MsaG041600 AT5G59780.2 59.155 71 29 0 46 116 20 90 8.39e-24 99.8
MsaG041600 AT1G69560.1 43.220 118 63 2 2 117 93 208 9.60e-24 102
MsaG041600 AT3G46130.4 59.155 71 29 0 46 116 20 90 1.19e-23 99.8
MsaG041600 AT3G53200.2 59.155 71 29 0 46 116 9 79 1.30e-23 99.0
MsaG041600 AT1G69560.2 43.220 118 63 2 2 117 109 224 1.33e-23 102
MsaG041600 AT1G66380.3 59.740 77 31 0 40 116 2 78 1.41e-23 95.5
MsaG041600 AT3G27785.1 44.340 106 55 3 8 112 183 285 1.44e-23 103
MsaG041600 AT4G18770.1 44.144 111 58 3 8 117 211 318 1.87e-23 102
MsaG041600 AT5G58850.1 44.231 104 54 3 14 116 105 205 4.23e-23 102
MsaG041600 AT3G09370.2 32.407 216 128 6 14 220 135 341 4.63e-23 102
MsaG041600 AT5G11050.1 47.000 100 49 3 14 112 105 201 5.34e-23 101
MsaG041600 AT3G09370.1 32.407 216 128 6 14 220 130 336 5.47e-23 102
MsaG041600 AT3G09370.3 32.407 216 128 6 14 220 143 349 1.02e-22 101
MsaG041600 AT5G02320.3 45.714 105 53 3 14 117 67 168 1.52e-22 100
MsaG041600 AT5G02320.1 45.714 105 53 3 14 117 127 228 1.71e-22 100
MsaG041600 AT5G02320.2 45.714 105 53 3 14 117 127 228 1.71e-22 100
MsaG041600 AT1G17950.1 46.667 105 50 4 14 116 5 105 7.25e-22 95.1
MsaG041600 AT5G11510.2 36.054 147 87 4 14 156 81 224 7.69e-22 99.8
MsaG041600 AT5G11510.3 36.054 147 87 4 14 156 81 224 7.85e-22 99.8
MsaG041600 AT5G11510.1 36.054 147 87 4 14 156 81 224 7.85e-22 99.8
MsaG041600 AT5G11510.4 36.054 147 87 4 14 156 81 224 7.85e-22 99.8
MsaG041600 AT5G11510.5 36.054 147 87 4 14 156 81 224 8.42e-22 99.4
MsaG041600 AT1G26780.1 43.810 105 57 1 12 116 96 198 9.44e-22 95.5
MsaG041600 AT1G26780.2 43.810 105 57 1 12 116 96 198 9.72e-22 97.1
MsaG041600 AT1G22640.3 63.636 66 24 0 59 124 1 66 1.04e-21 93.2
MsaG041600 AT1G73410.1 47.170 106 50 4 13 116 5 106 5.97e-21 92.4
MsaG041600 AT1G18960.1 39.130 138 71 4 5 142 4 128 6.95e-21 93.6
MsaG041600 AT2G39880.1 47.273 110 53 4 8 116 45 150 7.50e-21 94.4
MsaG041600 AT5G67300.1 47.115 104 51 3 14 116 6 106 1.33e-20 92.8
MsaG041600 AT1G73410.2 47.170 106 50 4 13 116 5 106 1.51e-20 90.1
MsaG041600 AT3G55730.1 49.038 104 49 3 14 116 56 156 1.52e-20 94.0
MsaG041600 AT4G32730.5 43.810 105 55 3 14 117 87 188 3.23e-20 94.7
MsaG041600 AT4G32730.4 43.810 105 55 3 14 117 87 188 3.23e-20 94.7
MsaG041600 AT4G32730.3 43.810 105 55 3 14 117 87 188 3.23e-20 94.7
MsaG041600 AT4G32730.2 43.810 105 55 3 14 117 87 188 3.23e-20 94.7
MsaG041600 AT4G32730.1 43.810 105 55 3 14 117 87 188 3.31e-20 94.7
MsaG041600 AT2G25230.1 44.231 104 51 4 10 112 25 122 3.98e-20 89.7
MsaG041600 AT3G50060.1 36.970 165 82 6 14 173 6 153 1.02e-19 90.1
MsaG041600 AT3G09230.1 46.226 106 53 3 14 118 55 157 1.14e-19 91.3
MsaG041600 AT5G14750.4 59.322 59 24 0 59 117 1 59 2.98e-19 84.7
MsaG041600 AT5G14750.2 59.322 59 24 0 59 117 1 59 2.98e-19 84.7
MsaG041600 AT4G37260.1 45.192 104 53 3 14 116 13 113 6.62e-19 88.2
MsaG041600 AT3G23250.2 59.322 59 24 0 59 117 1 59 2.33e-18 84.3
MsaG041600 AT1G66380.2 51.807 83 39 1 8 90 4 85 5.93e-18 79.7
MsaG041600 AT2G23290.1 45.192 104 53 3 14 116 13 113 6.06e-18 85.1
MsaG041600 AT3G29020.2 39.623 106 60 3 13 117 66 168 6.86e-18 84.7
MsaG041600 AT4G33450.1 45.000 100 51 3 9 107 14 110 7.09e-18 83.6
MsaG041600 AT3G29020.1 39.623 106 60 3 13 117 64 166 7.27e-18 83.2
MsaG041600 AT1G71030.2 50.000 74 37 0 52 125 5 78 1.37e-17 81.3
MsaG041600 AT4G00540.2 41.284 109 59 3 12 117 101 207 1.47e-17 85.1
MsaG041600 AT5G17800.1 37.069 116 71 2 1 116 80 193 1.77e-17 84.0
MsaG041600 AT1G71030.1 50.000 74 37 0 52 125 19 92 1.94e-17 80.9
MsaG041600 AT4G00540.1 41.284 109 59 3 12 117 99 205 2.55e-17 84.7
MsaG041600 AT2G02820.1 42.105 114 63 3 4 116 19 130 3.05e-17 84.3
MsaG041600 AT2G02820.3 43.000 100 55 2 17 116 33 130 3.44e-17 83.2
MsaG041600 AT2G02820.2 42.105 114 63 3 4 116 19 130 3.84e-17 84.3
MsaG041600 AT5G40430.1 37.383 107 62 3 7 112 47 149 7.68e-17 80.9
MsaG041600 AT1G14350.2 42.000 100 56 2 17 116 28 125 1.37e-15 79.3
MsaG041600 AT1G14350.1 42.000 100 56 2 17 116 28 125 1.37e-15 79.3
MsaG041600 AT2G37630.1 40.816 98 55 2 14 109 4 100 2.42e-14 75.1
MsaG041600 AT1G14350.3 50.000 60 30 0 57 116 23 82 1.66e-11 66.2
MsaG041600 AT1G14350.4 50.000 60 30 0 57 116 23 82 1.66e-11 66.2
MsaG041600 AT5G39700.1 33.898 118 73 3 8 122 50 165 2.17e-11 63.5
MsaG041600 AT4G25560.2 57.447 47 20 0 72 118 3 49 8.80e-11 62.0

Find 95 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCAATGTCAAGGAAAT+TGG 0.105747 8:+9029262 None:intergenic
AGTACTATTTCAGGTATAAT+TGG 0.212756 8:+9029677 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.217309 8:+9029839 None:intergenic
TGTCTACGTTTGTATCAATT+TGG 0.229657 8:+9029306 None:intergenic
TGGTGAAAACATTGCATATT+TGG 0.239301 8:+9029761 None:intergenic
CTTTGATAATTGACTAATTT+AGG 0.240485 8:+9029464 None:intergenic
ATCAAATACATCACAACTTA+TGG 0.251425 8:-9031006 MsaT041600.1:CDS
TTAGATGGTAGTACTATTTC+AGG 0.269039 8:+9029668 None:intergenic
GACTAATTGAGGCACAATAT+TGG 0.273377 8:+9029055 None:intergenic
ATAGAACTCCACCGCATTCT+AGG 0.277206 8:-9030694 MsaT041600.1:CDS
GATGATGATGATTGGAGTTT+AGG 0.296975 8:+9029381 None:intergenic
GGGAGGTGAATATCATAAAA+TGG 0.304714 8:+9029893 None:intergenic
TTGAAGTTTAGCATCACATT+AGG 0.305458 8:+9029824 None:intergenic
TTATCCACAAGATCAAAATA+TGG 0.309059 8:-9028952 MsaT041600.1:CDS
ACTAATTGAGGCACAATATT+GGG 0.311757 8:+9029056 None:intergenic
ACCTCATTACCCGTTCTTCC+TGG 0.330087 8:+9029983 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 8:+9030742 None:intergenic
GGCACCACTCCATTTAATAT+TGG 0.337426 8:-9029557 MsaT041600.1:CDS
CAAGGAAATTGGGATTATAA+TGG 0.353329 8:+9029273 None:intergenic
GATGTGTCACCAATATTAAA+TGG 0.364065 8:+9029548 None:intergenic
ACAAACCCTAGTATTCCTTT+AGG 0.376576 8:-9028849 MsaT041600.1:CDS
TTCTCAATGTCAAGGAAATT+GGG 0.377090 8:+9029263 None:intergenic
GGAGGTGAATATCATAAAAT+GGG 0.385428 8:+9029894 None:intergenic
TCACAAGAGGATGGATTAGA+TGG 0.386796 8:+9029653 None:intergenic
TGATCACAATCCAAATCAAT+TGG 0.394468 8:-9029600 MsaT041600.1:CDS
TTGTATTGTAATTAACTGTT+TGG 0.397259 8:+9028868 None:intergenic
TGTTGTGCCATTGATGCAAT+TGG 0.397345 8:+9029119 None:intergenic
AATGACCATGTATCTTCATC+AGG 0.398481 8:+9029218 None:intergenic
CCTTGGAATCAAATGAATCT+AGG 0.399640 8:+9028997 None:intergenic
CATCAATGTAATTATCCAAT+TGG 0.405881 8:+9028922 None:intergenic
GAGACGAGTTTGAAAGGTAT+AGG 0.406775 8:+9029783 None:intergenic
TTGTGAAAATACATGGTCAT+TGG 0.411595 8:-9029636 MsaT041600.1:CDS
TGAAGTTTAGCATCACATTA+GGG 0.421919 8:+9029825 None:intergenic
CTTTGATCATTGACTAATTG+AGG 0.425630 8:+9029044 None:intergenic
AAATATGGAAACTAACCAAT+TGG 0.425983 8:-9028937 MsaT041600.1:CDS
AGTCAACCCAATTGCATCAA+TGG 0.426518 8:-9029126 MsaT041600.1:CDS
ACTAAGAGCTTCATGTTCCT+TGG 0.426868 8:+9028980 None:intergenic
GTTTAGGATCACATGTTCCT+TGG 0.427075 8:+9029397 None:intergenic
TCCCATCCTAAAGGAATACT+AGG 0.429991 8:+9028843 None:intergenic
CCTAGATTCATTTGATTCCA+AGG 0.455369 8:-9028997 MsaT041600.1:CDS
TCATCAGGGAAAGGATTAGA+TGG 0.457767 8:+9029233 None:intergenic
AGTTCTGTTCCAAAACTTGC+TGG 0.464625 8:-9030967 MsaT041600.1:intron
CTGATCTTGATGATGATGAT+TGG 0.467876 8:+9029373 None:intergenic
CGTTCTTCCTGGCAAGTGCT+TGG 0.469448 8:+9029994 None:intergenic
ACTGCTGCATTAATGAACTT+TGG 0.470384 8:+9029519 None:intergenic
ACCCTAGTATTCCTTTAGGA+TGG 0.470539 8:-9028845 MsaT041600.1:CDS
AAGCACTTGCCAGGAAGAAC+GGG 0.472251 8:-9029992 MsaT041600.1:CDS
CAAATTGCCAAGCACTTGCC+AGG 0.478813 8:-9030001 MsaT041600.1:CDS
TCAATAATCATTTCAATGCC+AGG 0.480419 8:-9029718 MsaT041600.1:CDS
GTTGTGCCATTGATGCAATT+GGG 0.484555 8:+9029120 None:intergenic
ATAATTACATTGATGCCCTC+AGG 0.490476 8:-9028914 MsaT041600.1:CDS
CCCTAGTATTCCTTTAGGAT+GGG 0.495653 8:-9028844 MsaT041600.1:CDS
AACTATGGCTCCCATCCTAA+AGG 0.501906 8:+9028834 None:intergenic
CATCCTCTTGTGAAAATACA+TGG 0.505549 8:-9029643 MsaT041600.1:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8:-9030780 MsaT041600.1:CDS
ACTGTTTGGCTGCTTGATGA+TGG 0.506778 8:+9028882 None:intergenic
TTTGAGATGAGGTTGGAAGG+TGG 0.509462 8:+9029348 None:intergenic
AATCTAGGATGCAACAATCA+TGG 0.523526 8:+9029012 None:intergenic
CTTATGGACATGATTGCTGC+TGG 0.523991 8:-9030990 MsaT041600.1:CDS
AGAAGGTCAACAGAGGACTA+TGG 0.528903 8:-9031053 MsaT041600.1:CDS
CGATTATTCATCTGATTCCA+AGG 0.530355 8:-9029414 MsaT041600.1:CDS
TGTCTACCACTGTACCAGTT+TGG 0.535360 8:+9029741 None:intergenic
AAAGGTATAGGTGATCTTGA+TGG 0.536116 8:+9029795 None:intergenic
CAAGCACTTGCCAGGAAGAA+CGG 0.539089 8:-9029993 MsaT041600.1:CDS
TCATAAAATGGGGTGAAGGA+TGG 0.540027 8:+9029905 None:intergenic
CTTTCCCTGATGAAGATACA+TGG 0.545218 8:-9029223 MsaT041600.1:CDS
CTAAGACCTGATTTGAAACG+TGG 0.553388 8:-9030748 MsaT041600.1:CDS
TATTTGGAGACGAGTTTGAA+AGG 0.553706 8:+9029777 None:intergenic
TGCAACAATCATGGTCCTCA+AGG 0.560058 8:+9029021 None:intergenic
ATGGAACAATATCATCAGAA+AGG 0.564185 8:+9029924 None:intergenic
TCCACCGCATTCTAGGCAAT+AGG 0.565568 8:-9030687 MsaT041600.1:intron
GCCAGGAAGAACGGGTAATG+AGG 0.568173 8:-9029984 MsaT041600.1:CDS
ACCTCATCTCAAAATCTACA+AGG 0.569833 8:-9029338 MsaT041600.1:CDS
AATATCATAAAATGGGGTGA+AGG 0.572123 8:+9029901 None:intergenic
GTATTTGATTCTCAATGTCA+AGG 0.576272 8:+9029255 None:intergenic
TACATGGTCATTAGATTGTG+TGG 0.578377 8:-9029207 MsaT041600.1:CDS
CATGTATCTTCATCAGGGAA+AGG 0.587035 8:+9029224 None:intergenic
ATTGACTAATTTAGGCACAA+TGG 0.588637 8:+9029472 None:intergenic
TATAGGTGATCTTGATGGTG+AGG 0.593802 8:+9029800 None:intergenic
TGCTACATGCATAATCCTCA+AGG 0.602722 8:+9029441 None:intergenic
CTCTTGCTGTAGCAAAGAGA+AGG 0.605264 8:-9031070 MsaT041600.1:CDS
ATGACCATGTATCTTCATCA+GGG 0.622631 8:+9029219 None:intergenic
TGTGTAGGTCTGCAGAGATG+TGG 0.626648 8:-9030802 MsaT041600.1:intron
AGTCAATTATCAAAGCCTTG+AGG 0.626698 8:-9029456 MsaT041600.1:CDS
ACCTATTGCCTAGAATGCGG+TGG 0.629249 8:+9030686 None:intergenic
CCCATCCTAAAGGAATACTA+GGG 0.646201 8:+9028844 None:intergenic
GTCACCAATATTAAATGGAG+TGG 0.646540 8:+9029553 None:intergenic
GAGGTGAATATCATAAAATG+GGG 0.660266 8:+9029895 None:intergenic
AGTCAATGATCAAAGCCTTG+AGG 0.663412 8:-9029036 MsaT041600.1:CDS
TCAATGTCATGATCATCACT+TGG 0.687505 8:-9029090 MsaT041600.1:CDS
TGGAATCAGATGAATAATCG+AGG 0.688424 8:+9029417 None:intergenic
AGCAAAGAGAAGGTCAACAG+AGG 0.693727 8:-9031060 MsaT041600.1:CDS
TATACCTATTGCCTAGAATG+CGG 0.693771 8:+9030683 None:intergenic
ATGATGGCAATGAAAACCTG+AGG 0.700721 8:+9028898 None:intergenic
TGATGGCAATGAAAACCTGA+GGG 0.740418 8:+9028899 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 9028836 9031103 9028836 ID=MsaG041600
Chr8 mRNA 9028836 9031103 9028836 ID=MsaT041600.1;Parent=MsaG041600
Chr8 exon 9028836 9030030 9028836 ID=MsaT041600.1.exon3;Parent=MsaT041600.1
Chr8 CDS 9028836 9030030 9028836 ID=cds.MsaT041600.1;Parent=MsaT041600.1
Chr8 exon 9030688 9030817 9030688 ID=MsaT041600.1.exon2;Parent=MsaT041600.1
Chr8 CDS 9030688 9030817 9030688 ID=cds.MsaT041600.1;Parent=MsaT041600.1
Chr8 exon 9030968 9031103 9030968 ID=MsaT041600.1.exon1;Parent=MsaT041600.1
Chr8 CDS 9030968 9031103 9030968 ID=cds.MsaT041600.1;Parent=MsaT041600.1
Gene Sequence

>MsaT041600.1

ATGGCACATCACTCTTGCTGTAGCAAAGAGAAGGTCAACAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATGGACATGATTGCTGCTGGAGTTCTGTTCCAAAACTTGCTGGTCTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTTATGAAGAAGTAGCACTCATCATAGAACTCCACCGCATTCTAGGCAATAGATGGACACAAATTGCCAAGCACTTGCCAGGAAGAACGGGTAATGAGGTGAAAAACTTTTGGAATTCAAGCATAACGAAAAAACTCCTTTCTGATGATATTGTTCCATCCTTCACCCCATTTTATGATATTCACCTCCCCTACAACGCTGTTTTTAAGGAAAGTTTTTTTCCTTTAAATGCAAACCCTAATGTGATGCTAAACTTCAATCCTCACCATCAAGATCACCTATACCTTTCAAACTCGTCTCCAAATATGCAATGTTTTCACCAAACTGGTACAGTGGTAGACATCAATAATCATTTCAATGCCAGGTTCCTACCCAATCAAAATCCAATTATACCTGAAATAGTACTACCATCTAATCCATCCTCTTGTGAAAATACATGGTCATTGGATTGTGTAGCTCTTGATCACAATCCAAATCAATTGGAAAATCAAATTTCAAAAAGTGGCACCACTCCATTTAATATTGGTGACACATCAATCAACCAAAGTTCATTAATGCAGCAGTATGATCAATATCATGATCATGAAGCCATTGTGCCTAAATTAGTCAATTATCAAAGCCTTGAGGATTATGCATGTAGCATCCTCGATTATTCATCTGATTCCAAGGAACATGTGATCCTAAACTCCAATCATCATCATCAAGATCAGTTCCACCTTCCAACCTCATCTCAAAATCTACAAGGAAATTTTTACCAAATTGATACAAACGTAGACATGATCAATAACCATTATAATCCCAATTTCCTTGACATTGAGAATCAAATACCATCTAATCCTTTCCCTGATGAAGATACATGGTCATTAGATTGTGTGGCTCTTCATATCAATAGAAATAAAGAAAATCCAAGTTATACCACCCAGCAAAACAATTTAGTCAACCCAATTGCATCAATGGCACAACAATATGATCAATGTCATGATCATCACTTGGTTGAAACTGAACCCAATATTGTGCCTCAATTAGTCAATGATCAAAGCCTTGAGGACCATGATTGTTGCATCCTAGATTCATTTGATTCCAAGGAACATGAAGCTCTTAGTATTATTTATCCACAAGATCAAAATATGGAAACTAACCAATTGGATAATTACATTGATGCCCTCAGGTTTTCATTGCCATCATCAAGCAGCCAAACAGTTAATTACAATACAAACCCTAGTATTCCTTTAGGATGGGAGCCATAG
Protein sequence

>MsaT041600.1

MAHHSCCSKEKVNRGLWSPEEDEKLIKYITTYGHDCCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSYEEVALIIELHRILGNRWTQIAKHLPGRTGNEVKNFWNSSITKKLLSDDIVPSFTPFYDIHLPYNAVFKESFFPLNANPNVMLNFNPHHQDHLYLSNSSPNMQCFHQTGTVVDINNHFNARFLPNQNPIIPEIVLPSNPSSCENTWSLDCVALDHNPNQLENQISKSGTTPFNIGDTSINQSSLMQQYDQYHDHEAIVPKLVNYQSLEDYACSILDYSSDSKEHVILNSNHHHQDQFHLPTSSQNLQGNFYQIDTNVDMINNHYNPNFLDIENQIPSNPFPDEDTWSLDCVALHINRNKENPSYTTQQNNLVNPIASMAQQYDQCHDHHLVETEPNIVPQLVNDQSLEDHDCCILDSFDSKEHEALSIIYPQDQNMETNQLDNYIDALRFSLPSSSSQTVNYNTNPSIPLGWEP*