AlfalfaGEDB | MsaG041605

M. sativa ssp. caerulea / MsaG041605

KEGG: K09422
GO: GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009832 GO:0009834 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG041605	QSD99541.1	92.045	176	14	0	1	176	1	176	6.23e-117	345

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG041605	sp\|Q9SPG3\|MYB26_ARATH	86.614	127	8	1	1	118	1	127	2.59e-74	230

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG041605	tr\|A0A896W3A6\|A0A896W3A6_MELAB	92.045	176	14	0	1	176	1	176	2.97e-117	345

TFs/TRs:

Gene ID	Type	Classification
MsaG041605	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000523	MsaG041605	0.807335	9.028019e-50	1.445938e-47
MsaG000904	MsaG041605	0.983164	2.909645e-156	9.447047e-150
MsaG001390	MsaG041605	0.811811	9.968552e-51	1.779472e-48
MsaG004734	MsaG041605	0.809277	3.496084e-50	5.866766e-48
MsaG004978	MsaG041605	0.828019	2.028359e-54	5.549681e-52
MsaG005483	MsaG041605	0.808423	5.314057e-50	8.736220e-48
MsaG006093	MsaG041605	0.807996	6.546094e-50	1.065190e-47
MsaG006760	MsaG041605	0.817939	4.429388e-52	9.230677e-50
MsaG007279	MsaG041605	0.820118	1.422986e-52	3.139503e-50
MsaG007826	MsaG041605	0.807503	8.322781e-50	1.338335e-47
MsaG012081	MsaG041605	0.829325	9.833870e-55	2.791412e-52
MsaG012636	MsaG041605	0.803139	6.764344e-49	9.822312e-47
MsaG046794	MsaG041605	0.821599	6.515456e-53	1.494948e-50
MsaG002695	MsaG041605	0.805810	1.887839e-49	2.916571e-47
MsaG008963	MsaG041605	0.806421	1.406212e-49	2.204190e-47
MsaG028065	MsaG041605	0.812978	5.560007e-51	1.021603e-48
MsaG027228	MsaG041605	0.821548	6.696051e-53	1.534272e-50
MsaG029766	MsaG041605	0.807153	9.865355e-50	1.573204e-47
MsaG032354	MsaG041605	0.819911	1.586101e-52	3.480090e-50
MsaG031490	MsaG041605	0.808779	4.462722e-50	7.400145e-48
MsaG014251	MsaG041605	0.800590	2.244699e-48	3.075728e-46
MsaG014808	MsaG041605	0.812192	8.242647e-51	1.485182e-48
MsaG015853	MsaG041605	0.801905	1.211756e-48	1.710533e-46
MsaG015874	MsaG041605	0.803461	5.806046e-49	8.493642e-47
MsaG017371	MsaG041605	0.825538	7.884660e-54	2.013001e-51
MsaG018974	MsaG041605	0.805646	2.042401e-49	3.143323e-47
MsaG019118	MsaG041605	0.811579	1.119349e-50	1.986744e-48
MsaG019122	MsaG041605	0.813696	3.873580e-51	7.246420e-49
MsaG023678	MsaG041605	0.817560	5.387969e-52	1.111916e-49
MsaG024329	MsaG041605	0.824205	1.620411e-53	3.988615e-51
MsaG025782	MsaG041605	0.801297	1.612570e-48	2.245050e-46
MsaG026867	MsaG041605	0.812361	7.575896e-51	1.370808e-48
MsaG027579	MsaG041605	0.808283	5.689239e-50	9.321749e-48
MsaG027825	MsaG041605	0.801684	1.344528e-48	1.888406e-46
MsaG028876	MsaG041605	0.808809	4.397650e-50	7.297371e-48
MsaG031346	MsaG041605	0.808705	4.629205e-50	7.662540e-48
MsaG034201	MsaG041605	0.800175	2.724622e-48	3.698317e-46
MsaG034954	MsaG041605	0.813259	4.828004e-51	8.933429e-49
MsaG036329	MsaG041605	0.813922	3.455707e-51	6.501676e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG041605	MtrunA17_Chr8g0342541	86.441	177	22	2	1	176	1	176	9.26e-110	317
MsaG041605	MtrunA17_Chr8g0342521	85.311	177	20	2	1	176	1	172	1.42e-107	311
MsaG041605	MtrunA17_Chr8g0342481	80.791	177	31	2	1	176	1	175	1.36e-101	298
MsaG041605	MtrunA17_Chr2g0330041	78.857	175	32	3	1	173	1	172	2.34e-93	277
MsaG041605	MtrunA17_Chr1g0193371	72.180	133	36	1	1	132	1	133	1.68e-70	218
MsaG041605	MtrunA17_Chr3g0117091	71.631	141	34	1	1	141	1	135	3.79e-70	216
MsaG041605	MtrunA17_Chr2g0309911	78.862	123	25	1	1	123	1	122	4.43e-70	215
MsaG041605	MtrunA17_Chr7g0270891	72.180	133	36	1	1	132	1	133	8.14e-70	216
MsaG041605	MtrunA17_Chr1g0193801	71.429	133	37	1	1	132	1	133	1.28e-69	216
MsaG041605	MtrunA17_Chr4g0058631	75.806	124	30	0	1	124	1	124	1.81e-68	212
MsaG041605	MtrunA17_Chr1g0211161	70.588	136	34	1	3	138	4	133	2.79e-68	207
MsaG041605	MtrunA17_Chr8g0387421	77.311	119	27	0	1	119	1	119	8.56e-67	207
MsaG041605	MtrunA17_Chr7g0271241	66.061	165	46	4	1	155	1	165	4.81e-66	207
MsaG041605	MtrunA17_Chr5g0397231	78.182	110	24	0	1	110	1	110	1.25e-64	202
MsaG041605	MtrunA17_Chr8g0342511	98.851	87	1	0	1	87	1	87	6.57e-61	184
MsaG041605	MtrunA17_Chr8g0385321	64.516	124	44	0	1	124	1	124	1.24e-58	186
MsaG041605	MtrunA17_Chr8g0342531	93.258	89	6	0	1	89	1	89	1.40e-58	181
MsaG041605	MtrunA17_Chr3g0088461	72.477	109	30	0	8	116	18	126	2.14e-57	183
MsaG041605	MtrunA17_Chr3g0131121	55.333	150	61	1	1	150	1	144	3.64e-57	181
MsaG041605	MtrunA17_Chr4g0037141	58.088	136	51	1	1	136	1	130	1.08e-56	180
MsaG041605	MtrunA17_Chr3g0115821	59.091	132	53	1	1	131	1	132	1.18e-56	181
MsaG041605	MtrunA17_Chr5g0435101	63.025	119	44	0	6	124	5	123	2.73e-56	176
MsaG041605	MtrunA17_Chr5g0410961	61.789	123	47	0	1	123	1	123	1.22e-55	179
MsaG041605	MtrunA17_Chr1g0203411	64.655	116	41	0	1	116	1	116	1.30e-55	177
MsaG041605	MtrunA17_Chr4g0032401	72.642	106	29	0	11	116	16	121	1.89e-55	178
MsaG041605	MtrunA17_Chr2g0328771	71.429	105	30	0	12	116	20	124	6.15e-55	176
MsaG041605	MtrunA17_Chr4g0039971	59.350	123	50	0	1	123	2	124	7.91e-55	177
MsaG041605	MtrunA17_Chr6g0453471	55.245	143	63	1	1	142	1	143	1.43e-54	176
MsaG041605	MtrunA17_Chr6g0452271	50.000	170	77	3	1	169	1	163	2.37e-54	175
MsaG041605	MtrunA17_Chr4g0057031	62.602	123	46	0	1	123	1	123	3.03e-54	173
MsaG041605	MtrunA17_Chr8g0342461	85.556	90	12	1	1	89	1	90	6.67e-54	168
MsaG041605	MtrunA17_Chr3g0110351	62.602	123	46	0	1	123	1	123	8.07e-54	173
MsaG041605	MtrunA17_Chr4g0042671	56.716	134	58	0	1	134	1	134	1.01e-53	176
MsaG041605	MtrunA17_Chr8g0342471	84.444	90	13	1	1	89	1	90	2.53e-53	166
MsaG041605	MtrunA17_Chr5g0434571	62.602	123	46	0	1	123	37	159	2.58e-53	173
MsaG041605	MtrunA17_Chr2g0281071	61.290	124	47	1	1	123	1	124	3.47e-53	172
MsaG041605	MtrunA17_Chr7g0217741	51.250	160	65	3	1	160	1	147	5.29e-53	171
MsaG041605	MtrunA17_Chr2g0323411	59.542	131	52	1	1	130	1	131	5.47e-53	171
MsaG041605	MtrunA17_Chr4g0048511	62.097	124	46	1	1	123	1	124	6.13e-53	172
MsaG041605	MtrunA17_Chr5g0395281	62.069	116	44	0	8	123	8	123	1.95e-52	169
MsaG041605	MtrunA17_Chr7g0228891	61.789	123	47	0	1	123	1	123	6.81e-52	167
MsaG041605	MtrunA17_Chr8g0349261	60.800	125	47	2	1	123	1	125	1.21e-51	167
MsaG041605	MtrunA17_Chr7g0274581	56.589	129	56	0	1	129	1	129	1.74e-51	164
MsaG041605	MtrunA17_Chr1g0203441	64.167	120	43	0	9	128	10	129	1.84e-51	166
MsaG041605	MtrunA17_Chr1g0151941	50.000	162	78	3	1	161	1	160	2.35e-51	165
MsaG041605	MtrunA17_Chr3g0103281	61.538	130	49	1	1	129	1	130	4.19e-51	167
MsaG041605	MtrunA17_Chr4g0044421	54.861	144	65	0	1	144	1	144	7.24e-51	162
MsaG041605	MtrunA17_Chr2g0323351	61.261	111	43	0	7	117	7	117	9.49e-51	164
MsaG041605	MtrunA17_Chr1g0187761	62.069	116	44	0	1	116	1	116	2.89e-50	162
MsaG041605	MtrunA17_Chr6g0470971	62.500	120	45	0	9	128	11	130	1.58e-49	161
MsaG041605	MtrunA17_Chr4g0068061	56.489	131	55	1	1	129	1	131	2.78e-49	162
MsaG041605	MtrunA17_Chr1g0194951	62.097	124	47	0	1	124	1	124	3.80e-49	163
MsaG041605	MtrunA17_Chr2g0311221	62.385	109	41	0	2	110	4	112	6.59e-49	161
MsaG041605	MtrunA17_Chr4g0022931	58.929	112	46	0	5	116	6	117	5.52e-48	157
MsaG041605	MtrunA17_Chr4g0070641	57.759	116	49	0	1	116	1	116	6.73e-48	154
MsaG041605	MtrunA17_Chr1g0167661	57.265	117	50	0	1	117	1	117	8.95e-48	156
MsaG041605	MtrunA17_Chr4g0070611	57.759	116	49	0	1	116	1	116	1.45e-47	157
MsaG041605	MtrunA17_Chr7g0261281	57.759	116	49	0	1	116	1	116	1.91e-47	156
MsaG041605	MtrunA17_Chr7g0275911	57.759	116	49	0	1	116	1	116	4.25e-47	154
MsaG041605	MtrunA17_Chr3g0121241	57.627	118	50	0	6	123	36	153	6.18e-47	155
MsaG041605	MtrunA17_Chr4g0022901	56.410	117	51	0	5	121	6	122	7.29e-47	154
MsaG041605	MtrunA17_Chr7g0217221	56.897	116	50	0	1	116	1	116	1.18e-46	154
MsaG041605	MtrunA17_Chr1g0167691	56.410	117	51	0	1	117	1	117	1.21e-46	153
MsaG041605	MtrunA17_Chr8g0346561	57.759	116	49	0	1	116	1	116	1.75e-46	154
MsaG041605	MtrunA17_Chr4g0028311	57.143	119	50	1	1	118	1	119	4.10e-45	151
MsaG041605	MtrunA17_Chr4g0022911	54.783	115	52	0	5	119	6	120	7.72e-45	149
MsaG041605	MtrunA17_Chr7g0264641	57.143	119	50	1	1	118	1	119	1.24e-44	149
MsaG041605	MtrunA17_Chr4g0060721	56.034	116	51	0	1	116	2	117	2.29e-44	149
MsaG041605	MtrunA17_Chr5g0417821	57.522	113	48	0	12	124	7	119	2.59e-44	148
MsaG041605	MtrunA17_Chr7g0228231	44.444	171	72	2	1	148	1	171	3.01e-44	145
MsaG041605	MtrunA17_Chr1g0152011	56.780	118	50	1	1	117	1	118	3.33e-44	149
MsaG041605	MtrunA17_Chr7g0269831	58.475	118	49	0	1	118	1	118	3.64e-44	149
MsaG041605	MtrunA17_Chr5g0400821	55.932	118	51	1	1	117	1	118	5.65e-44	148
MsaG041605	MtrunA17_Chr6g0450101	56.780	118	49	1	1	116	1	118	7.55e-44	144
MsaG041605	MtrunA17_Chr3g0092401	56.757	111	48	0	6	116	7	117	1.51e-43	147
MsaG041605	MtrunA17_Chr3g0135311	54.237	118	53	1	1	117	1	118	2.44e-43	147
MsaG041605	MtrunA17_Chr7g0254411	54.310	116	53	0	1	116	1	116	3.76e-43	146
MsaG041605	MtrunA17_Chr1g0186061	55.856	111	49	0	5	115	13	123	4.20e-43	144
MsaG041605	MtrunA17_Chr6g0453211	58.095	105	44	0	6	110	6	110	6.43e-43	145
MsaG041605	MtrunA17_Chr2g0327351	57.658	111	46	1	1	110	1	111	1.01e-42	145
MsaG041605	MtrunA17_Chr4g0054391	60.000	110	43	1	1	109	1	110	1.57e-42	144
MsaG041605	MtrunA17_Chr4g0022881	56.075	107	47	0	8	114	8	114	1.83e-42	142
MsaG041605	MtrunA17_Chr1g0168661	55.357	112	50	0	4	115	13	124	1.95e-42	142
MsaG041605	MtrunA17_Chr1g0209661	57.009	107	46	0	9	115	24	130	2.53e-42	144
MsaG041605	MtrunA17_Chr1g0194291	54.386	114	52	0	2	115	11	124	1.47e-41	140
MsaG041605	MtrunA17_Chr8g0343831	56.075	107	47	0	10	116	6	112	2.07e-41	140
MsaG041605	MtrunA17_Chr3g0099131	59.615	104	42	0	12	115	41	144	2.61e-41	145
MsaG041605	MtrunA17_Chr4g0055981	44.706	170	84	4	9	173	52	216	3.97e-41	138
MsaG041605	MtrunA17_Chr6g0487491	47.436	156	73	2	1	147	1	156	8.82e-41	138
MsaG041605	MtrunA17_Chr4g0022891	55.660	106	47	0	8	113	8	113	1.13e-40	137
MsaG041605	MtrunA17_Chr4g0072751	54.955	111	49	1	1	110	1	111	4.94e-40	139
MsaG041605	MtrunA17_Chr3g0080861	56.190	105	46	0	12	116	37	141	6.70e-40	141
MsaG041605	MtrunA17_Chr8g0354661	56.731	104	45	0	12	115	37	140	1.06e-39	141
MsaG041605	MtrunA17_Chr1g0194301	53.846	104	48	0	12	115	33	136	1.58e-39	135
MsaG041605	MtrunA17_Chr1g0154031	56.731	104	45	0	12	115	76	179	1.63e-39	139
MsaG041605	MtrunA17_Chr7g0240821	60.000	100	40	0	17	116	6	105	1.71e-39	134
MsaG041605	MtrunA17_Chr1g0180391	49.123	114	58	0	3	116	10	123	3.88e-39	133
MsaG041605	MtrunA17_Chr5g0434831	54.717	106	48	0	12	117	7	112	3.93e-38	129
MsaG041605	MtrunA17_Chr4g0042611	61.364	88	34	0	1	88	1	88	9.87e-38	125
MsaG041605	MtrunA17_Chr5g0434911	51.327	113	55	0	7	119	16	128	1.26e-37	130
MsaG041605	MtrunA17_Chr5g0434931	51.818	110	53	0	12	121	35	144	1.74e-37	130
MsaG041605	MtrunA17_Chr7g0220341	55.963	109	46	1	12	118	25	133	2.25e-37	130
MsaG041605	MtrunA17_Chr2g0322521	57.692	104	44	0	12	115	29	132	2.77e-37	132
MsaG041605	MtrunA17_Chr7g0247131	67.901	81	26	0	43	123	9	89	6.33e-37	129
MsaG041605	MtrunA17_Chr2g0327821	42.759	145	79	3	9	151	3	145	8.48e-37	127
MsaG041605	MtrunA17_Chr4g0068921	54.369	103	47	0	12	114	24	126	5.42e-36	124
MsaG041605	MtrunA17_Chr7g0228991	53.271	107	50	0	12	118	29	135	6.40e-36	126
MsaG041605	MtrunA17_Chr8g0360111	54.286	105	48	0	8	112	21	125	6.86e-36	125
MsaG041605	MtrunA17_Chr4g0030881	50.000	110	48	1	13	115	8	117	2.52e-35	124
MsaG041605	MtrunA17_Chr1g0192411	53.333	105	49	0	11	115	11	115	2.99e-35	127
MsaG041605	MtrunA17_Chr2g0293911	55.340	103	46	0	12	114	24	126	3.12e-35	125
MsaG041605	MtrunA17_Chr5g0434841	50.943	106	52	0	12	117	20	125	1.85e-34	123
MsaG041605	MtrunA17_Chr5g0440781	39.157	166	77	3	12	176	12	154	4.76e-34	119
MsaG041605	MtrunA17_Chr4g0013361	50.877	114	55	1	12	124	10	123	9.44e-34	121
MsaG041605	MtrunA17_Chr8g0334881	50.000	112	55	1	4	114	2	113	9.76e-34	122
MsaG041605	MtrunA17_Chr5g0441141	46.774	124	60	3	12	134	12	130	3.33e-33	119
MsaG041605	MtrunA17_Chr5g0440761	46.774	124	60	3	12	134	12	130	3.71e-33	119
MsaG041605	MtrunA17_Chr2g0323321	56.977	86	37	0	7	92	6	91	8.29e-33	113
MsaG041605	MtrunA17_Chr2g0294811	57.955	88	37	0	1	88	1	88	1.90e-31	110
MsaG041605	MtrunA17_Chr3g0099141	54.651	86	39	0	8	93	36	121	5.15e-31	110
MsaG041605	MtrunA17_Chr5g0395221	58.750	80	33	0	9	88	9	88	3.05e-30	106
MsaG041605	MtrunA17_Chr5g0429661	48.544	103	50	2	14	115	122	222	3.42e-30	113
MsaG041605	MtrunA17_Chr5g0441131	47.115	104	54	1	12	114	9	112	1.37e-29	107
MsaG041605	MtrunA17_Chr4g0008551	49.515	103	49	2	14	115	38	138	9.64e-29	109
MsaG041605	MtrunA17_Chr4g0053431	50.000	102	50	1	14	115	5	105	3.25e-28	106
MsaG041605	MtrunA17_Chr6g0480581	44.715	123	59	3	14	129	4	124	8.09e-28	104
MsaG041605	MtrunA17_Chr7g0238631	47.368	114	54	3	14	123	113	224	8.76e-28	108
MsaG041605	MtrunA17_Chr3g0139671	43.966	116	59	3	14	125	85	198	1.48e-27	108
MsaG041605	MtrunA17_Chr5g0401731	43.750	128	67	3	3	127	2	127	1.68e-27	105
MsaG041605	MtrunA17_Chr6g0454921	42.446	139	73	4	8	141	7	143	2.43e-27	102
MsaG041605	MtrunA17_Chr3g0133601	45.217	115	62	1	8	122	31	144	2.23e-26	100
MsaG041605	MtrunA17_Chr1g0157731	33.529	170	98	5	14	171	91	257	4.43e-26	104
MsaG041605	MtrunA17_Chr7g0229131	56.000	75	33	0	43	117	3	77	9.05e-26	97.4
MsaG041605	MtrunA17_Chr4g0042501	45.217	115	55	3	2	115	98	205	1.42e-25	101
MsaG041605	MtrunA17_Chr4g0058991	42.593	108	59	2	9	115	204	309	1.91e-25	101
MsaG041605	MtrunA17_Chr7g0229101	59.155	71	29	0	43	113	3	73	2.61e-25	97.4
MsaG041605	MtrunA17_Chr5g0417621	46.226	106	54	2	11	115	131	234	4.70e-25	100
MsaG041605	MtrunA17_Chr3g0093811	48.958	96	48	1	43	137	13	108	9.59e-25	97.1
MsaG041605	MtrunA17_Chr5g0434901	58.824	68	28	0	46	113	7	74	1.01e-24	93.2
MsaG041605	MtrunA17_Chr5g0437321	47.170	106	52	3	8	112	14	116	1.29e-24	97.1
MsaG041605	MtrunA17_Chr1g0177901	40.164	122	58	2	25	132	5	125	1.58e-24	95.1
MsaG041605	MtrunA17_Chr3g0125801	38.889	144	78	3	14	149	16	157	2.42e-24	96.7
MsaG041605	MtrunA17_Chr6g0460661	45.161	93	48	2	17	108	19	109	5.77e-24	92.4
MsaG041605	MtrunA17_Chr7g0228531	42.308	104	58	2	12	115	218	319	5.79e-24	97.4
MsaG041605	MtrunA17_Chr3g0117511	41.748	103	57	2	14	115	183	283	7.05e-24	97.4
MsaG041605	MtrunA17_Chr6g0453751	49.451	91	37	2	12	93	20	110	1.81e-22	87.8
MsaG041605	MtrunA17_Chr6g0460671	37.037	135	78	4	14	145	99	229	3.30e-22	91.7
MsaG041605	MtrunA17_Chr5g0425591	45.882	85	45	1	12	95	9	93	7.87e-22	85.1
MsaG041605	MtrunA17_Chr5g0397841	44.231	104	54	3	8	110	105	205	9.66e-22	91.3
MsaG041605	MtrunA17_Chr7g0228401	44.828	87	47	1	25	111	290	375	1.19e-21	91.3
MsaG041605	MtrunA17_Chr7g0254261	33.333	189	98	7	1	178	81	252	2.64e-21	89.4
MsaG041605	MtrunA17_Chr7g0228481	41.000	100	57	2	12	111	218	315	1.73e-20	87.8
MsaG041605	MtrunA17_Chr7g0238651	38.776	98	58	1	14	109	7	104	1.07e-17	79.3
MsaG041605	MtrunA17_Chr7g0233061	35.185	108	65	3	14	121	180	282	1.99e-17	78.6
MsaG041605	MtrunA17_Chr5g0416341	39.394	99	59	1	17	115	29	126	3.93e-17	78.2
MsaG041605	MtrunA17_Chr8g0362231	33.913	115	75	1	1	115	9	122	4.59e-16	75.1
MsaG041605	MtrunA17_Chr1g0193901	51.471	68	33	0	1	68	1	68	8.90e-16	69.7
MsaG041605	MtrunA17_Chr1g0193891	51.471	68	33	0	1	68	1	68	8.90e-16	69.7
MsaG041605	MtrunA17_Chr1g0193871	51.471	68	33	0	1	68	1	68	8.90e-16	69.7
MsaG041605	MtrunA17_Chr1g0193881	51.471	68	33	0	1	68	1	68	8.90e-16	69.7
MsaG041605	MtrunA17_Chr5g0434871	54.348	46	21	0	73	118	1	46	6.99e-13	61.2
MsaG041605	MtrunA17_Chr3g0104491	37.313	67	38	1	53	115	1	67	1.92e-12	63.9
MsaG041605	MtrunA17_Chr5g0395231	56.522	46	20	0	78	123	5	50	2.64e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG041605	AT3G13890.2	93.220	118	8	0	1	118	1	118	1.81e-78	238
MsaG041605	AT3G13890.1	86.614	127	8	1	1	118	1	127	2.63e-75	230
MsaG041605	AT1G57560.1	63.694	157	56	1	1	156	1	157	3.77e-71	218
MsaG041605	AT3G12720.1	79.032	124	25	1	1	124	12	134	2.19e-70	216
MsaG041605	AT1G57560.2	58.289	187	76	2	1	185	1	187	2.20e-70	215
MsaG041605	AT4G01680.3	76.423	123	29	0	1	123	1	123	5.52e-70	213
MsaG041605	AT5G26660.1	76.613	124	29	0	1	124	1	124	9.69e-70	216
MsaG041605	AT1G09540.1	73.134	134	35	1	1	133	1	134	1.20e-69	216
MsaG041605	AT4G01680.1	76.423	123	29	0	1	123	1	123	4.29e-69	213
MsaG041605	AT1G63910.1	79.310	116	24	0	1	116	1	116	1.87e-67	210
MsaG041605	AT4G01680.2	69.630	135	29	1	1	123	1	135	2.08e-65	204
MsaG041605	AT2G16720.1	62.903	124	46	0	1	124	1	124	1.23e-58	184
MsaG041605	AT4G34990.1	56.944	144	56	1	1	144	1	138	1.37e-57	182
MsaG041605	AT4G09460.1	56.164	146	56	1	1	138	1	146	3.82e-57	180
MsaG041605	AT4G12350.1	55.000	160	71	1	1	159	1	160	7.90e-57	181
MsaG041605	AT3G08500.1	50.000	184	87	3	3	183	18	199	1.49e-56	181
MsaG041605	AT4G38620.1	54.861	144	59	1	1	144	1	138	1.54e-56	180
MsaG041605	AT4G22680.1	54.839	155	64	1	1	155	1	149	1.55e-56	179
MsaG041605	AT1G22640.1	61.789	123	47	0	1	123	1	123	4.04e-56	178
MsaG041605	AT5G12870.1	73.832	107	28	0	10	116	16	122	4.16e-56	179
MsaG041605	AT3G61250.1	61.789	123	47	0	1	123	1	123	1.51e-55	177
MsaG041605	AT3G01140.2	60.976	123	48	0	1	123	1	123	1.57e-55	179
MsaG041605	AT1G34670.1	59.848	132	52	1	1	131	1	132	2.44e-55	179
MsaG041605	AT3G02940.2	60.163	123	49	0	1	123	1	123	3.42e-55	177
MsaG041605	AT3G02940.1	60.163	123	49	0	1	123	1	123	6.54e-55	177
MsaG041605	AT3G02940.3	60.163	123	49	0	1	123	1	123	6.54e-55	177
MsaG041605	AT4G05100.1	61.290	124	47	1	1	123	1	124	9.58e-55	176
MsaG041605	AT5G15310.4	54.422	147	61	1	1	141	1	147	1.19e-54	174
MsaG041605	AT5G15310.2	60.163	123	49	0	1	123	1	123	1.98e-54	175
MsaG041605	AT5G15310.1	60.163	123	49	0	1	123	1	123	2.42e-54	175
MsaG041605	AT4G17785.2	62.097	124	46	1	1	123	1	124	2.63e-54	176
MsaG041605	AT4G21440.1	60.976	123	48	0	1	123	1	123	2.75e-54	176
MsaG041605	AT4G17785.1	62.097	124	46	1	1	123	1	124	3.17e-54	176
MsaG041605	AT3G01140.1	61.864	118	45	0	6	123	49	166	1.07e-53	176
MsaG041605	AT1G66230.1	62.602	123	46	0	1	123	1	123	1.30e-53	172
MsaG041605	AT5G16770.4	58.537	123	51	0	1	123	1	123	1.32e-53	173
MsaG041605	AT5G16770.3	58.537	123	51	0	1	123	1	123	1.32e-53	173
MsaG041605	AT5G65230.1	60.163	123	49	0	1	123	1	123	1.92e-53	172
MsaG041605	AT5G16770.1	58.537	123	51	0	1	123	1	123	2.59e-53	173
MsaG041605	AT5G16770.2	58.537	123	51	0	1	123	1	123	2.59e-53	173
MsaG041605	AT4G28110.1	59.350	123	50	0	1	123	1	123	2.60e-53	171
MsaG041605	AT5G54230.1	63.415	123	45	0	1	123	1	123	3.33e-53	172
MsaG041605	AT5G16600.1	56.081	148	63	2	1	147	1	147	3.93e-53	172
MsaG041605	AT1G35515.1	60.163	123	49	0	1	123	1	123	4.18e-53	169
MsaG041605	AT5G56110.1	57.143	140	59	1	1	139	1	140	1.26e-52	171
MsaG041605	AT5G10280.1	55.224	134	59	1	1	133	1	134	1.85e-52	171
MsaG041605	AT5G14340.1	48.663	187	82	3	1	186	13	186	7.23e-52	167
MsaG041605	AT5G49330.1	56.291	151	59	2	1	150	1	145	1.58e-51	169
MsaG041605	AT2G31180.1	62.931	116	43	0	1	116	1	116	1.48e-50	163
MsaG041605	AT3G28470.1	52.866	157	73	1	1	156	1	157	7.51e-50	164
MsaG041605	AT1G56160.1	62.609	115	43	0	2	116	4	118	1.27e-49	162
MsaG041605	AT5G60890.1	55.372	121	54	0	1	121	1	121	1.33e-49	162
MsaG041605	AT3G48920.1	62.385	109	41	0	8	116	14	122	1.46e-49	161
MsaG041605	AT5G52260.1	66.972	109	36	0	9	117	9	117	1.87e-49	161
MsaG041605	AT1G79180.1	61.739	115	44	0	2	116	4	118	3.12e-49	161
MsaG041605	AT3G23250.1	57.759	116	49	0	1	116	1	116	6.35e-49	160
MsaG041605	AT5G61420.2	41.053	190	91	3	1	186	1	173	6.88e-49	162
MsaG041605	AT5G07690.1	54.472	123	56	0	1	123	1	123	7.03e-49	162
MsaG041605	AT5G62320.1	47.097	155	69	2	2	149	3	151	8.98e-49	159
MsaG041605	AT5G23000.1	50.307	163	71	3	1	153	1	163	1.49e-48	160
MsaG041605	AT2G47460.1	54.610	141	62	1	1	141	1	139	1.85e-48	161
MsaG041605	AT3G13540.1	54.135	133	55	1	6	138	17	143	1.94e-48	158
MsaG041605	AT5G07700.1	54.472	123	56	0	1	123	1	123	3.17e-48	160
MsaG041605	AT5G07700.2	54.472	123	56	0	1	123	1	123	3.17e-48	160
MsaG041605	AT1G06180.1	60.345	116	46	0	1	116	1	116	3.78e-48	157
MsaG041605	AT1G18570.1	55.462	119	52	1	6	123	6	124	7.72e-48	159
MsaG041605	AT1G16490.1	60.169	118	47	0	2	119	4	121	1.81e-47	156
MsaG041605	AT1G74430.1	55.285	123	55	0	1	123	1	123	5.35e-47	155
MsaG041605	AT4G25560.1	64.815	108	38	0	10	117	8	115	5.43e-47	155
MsaG041605	AT1G74080.1	55.932	118	52	0	6	123	6	123	1.63e-46	155
MsaG041605	AT3G62610.1	58.621	116	48	0	1	116	1	116	1.91e-46	155
MsaG041605	AT3G12820.1	59.821	112	45	0	6	117	8	119	3.38e-46	152
MsaG041605	AT3G47600.1	56.897	116	50	0	1	116	1	116	3.80e-45	152
MsaG041605	AT1G74650.1	54.762	126	53	1	1	122	1	126	6.24e-45	151
MsaG041605	AT5G57620.1	56.780	118	50	1	1	117	1	118	7.29e-45	151
MsaG041605	AT5G40350.1	58.182	110	46	0	11	120	16	125	1.40e-44	147
MsaG041605	AT5G62470.2	57.759	116	49	0	1	116	1	116	1.98e-44	150
MsaG041605	AT3G27810.1	49.265	136	69	0	9	144	17	152	2.01e-44	147
MsaG041605	AT5G40330.1	41.341	179	101	2	9	185	9	185	3.31e-44	146
MsaG041605	AT1G08810.1	55.172	116	52	0	1	116	1	116	4.92e-44	147
MsaG041605	AT5G52600.1	55.906	127	51	1	9	130	9	135	5.31e-44	145
MsaG041605	AT3G01530.1	58.095	105	44	0	12	116	25	129	6.26e-44	145
MsaG041605	AT5G14750.1	57.692	104	44	0	13	116	17	120	9.36e-44	144
MsaG041605	AT2G36890.1	54.622	119	53	1	1	118	1	119	1.04e-43	147
MsaG041605	AT5G65790.1	55.932	118	51	1	1	117	1	118	1.10e-43	149
MsaG041605	AT2G36890.2	54.622	119	53	1	1	118	42	160	1.47e-43	148
MsaG041605	AT3G49690.1	55.085	118	52	1	1	117	1	118	1.93e-43	147
MsaG041605	AT1G18710.1	52.846	123	58	0	1	123	1	123	2.22e-43	145
MsaG041605	AT5G35550.1	58.333	108	45	0	9	116	11	118	3.29e-43	145
MsaG041605	AT3G28910.1	57.658	111	47	0	6	116	6	116	4.19e-43	146
MsaG041605	AT1G48000.1	58.654	104	43	0	11	114	31	134	7.97e-43	143
MsaG041605	AT4G37780.1	54.622	119	53	1	1	118	1	119	8.54e-43	145
MsaG041605	AT5G62470.1	57.759	116	48	1	1	116	1	115	1.41e-42	145
MsaG041605	AT3G27920.1	48.800	125	64	0	10	134	12	136	1.65e-42	142
MsaG041605	AT1G79180.2	47.297	148	45	1	2	116	4	151	1.90e-42	145
MsaG041605	AT5G06100.1	59.615	104	42	0	12	115	32	135	1.43e-41	145
MsaG041605	AT4G13480.1	60.194	103	41	0	13	115	7	109	2.09e-41	140
MsaG041605	AT5G06100.5	59.615	104	42	0	12	115	32	135	5.22e-41	145
MsaG041605	AT5G06100.2	59.615	104	42	0	12	115	32	135	5.22e-41	145
MsaG041605	AT5G06100.3	59.615	104	42	0	12	115	32	135	5.22e-41	145
MsaG041605	AT5G06100.4	59.615	104	42	0	12	115	32	135	5.22e-41	145
MsaG041605	AT3G11440.2	57.692	104	44	0	12	115	41	144	5.58e-41	144
MsaG041605	AT3G30210.1	58.824	102	42	0	13	114	28	129	6.98e-41	139
MsaG041605	AT3G24310.1	58.491	106	44	0	13	118	19	124	8.92e-41	139
MsaG041605	AT3G11440.3	54.386	114	52	0	2	115	31	144	2.09e-40	144
MsaG041605	AT3G11440.4	54.386	114	52	0	2	115	31	144	2.09e-40	144
MsaG041605	AT3G11440.1	54.386	114	52	0	2	115	31	144	2.09e-40	144
MsaG041605	AT1G68320.1	50.000	126	63	0	10	135	17	142	3.34e-40	138
MsaG041605	AT2G26960.1	53.774	106	49	0	9	114	17	122	6.87e-40	140
MsaG041605	AT5G26660.2	75.000	80	20	0	45	124	14	93	8.98e-40	137
MsaG041605	AT4G26930.1	57.282	103	44	0	12	114	19	121	1.04e-39	139
MsaG041605	AT5G55020.1	54.545	110	49	1	12	121	26	134	6.34e-39	139
MsaG041605	AT3G06490.1	57.944	107	45	0	8	114	15	121	3.75e-38	134
MsaG041605	AT2G32460.2	53.846	104	48	0	12	115	6	109	3.93e-38	136
MsaG041605	AT2G32460.1	53.846	104	48	0	12	115	18	121	4.25e-38	137
MsaG041605	AT1G25340.1	47.967	123	64	0	13	135	19	141	5.50e-38	132
MsaG041605	AT2G47190.1	49.038	104	53	0	12	115	20	123	8.62e-38	131
MsaG041605	AT3G53200.1	51.402	107	52	0	9	115	6	112	2.48e-37	129
MsaG041605	AT5G59780.3	49.533	107	54	0	9	115	5	111	6.24e-36	125
MsaG041605	AT5G49620.1	54.717	106	48	0	9	114	23	128	1.25e-35	127
MsaG041605	AT3G60460.1	54.128	109	49	1	7	114	6	114	2.83e-35	125
MsaG041605	AT3G46130.1	50.485	103	51	0	13	115	10	112	6.05e-35	124
MsaG041605	AT1G66370.1	52.885	104	49	0	12	115	8	111	6.05e-35	123
MsaG041605	AT2G26950.1	48.039	102	53	0	9	110	13	114	2.10e-33	122
MsaG041605	AT1G25340.2	45.528	123	62	1	13	135	19	136	4.14e-33	119
MsaG041605	AT1G66380.1	55.769	104	46	0	12	115	8	111	6.14e-33	115
MsaG041605	AT1G25340.3	45.528	123	62	1	13	135	19	136	7.36e-33	119
MsaG041605	AT3G27810.2	51.000	100	49	0	45	144	4	103	3.26e-32	114
MsaG041605	AT5G40350.2	63.158	76	28	0	45	120	5	80	3.55e-32	114
MsaG041605	AT5G49620.2	48.333	120	48	1	9	114	23	142	7.59e-32	117
MsaG041605	AT1G56650.1	54.808	104	47	0	12	115	8	111	8.28e-32	115
MsaG041605	AT1G66390.1	54.808	104	47	0	12	115	8	111	2.57e-31	114
MsaG041605	AT5G14750.3	65.217	69	24	0	48	116	18	86	1.62e-30	110
MsaG041605	AT5G35550.2	54.348	92	34	1	25	116	38	121	8.83e-30	110
MsaG041605	AT5G40360.1	39.161	143	80	4	9	151	153	288	7.90e-29	110
MsaG041605	AT3G47600.2	61.111	72	28	0	45	116	39	110	2.83e-28	108
MsaG041605	AT3G12820.2	61.429	70	27	0	48	117	2	71	5.97e-28	103
MsaG041605	AT5G11050.1	46.602	103	52	2	14	115	105	205	9.10e-28	108
MsaG041605	AT3G46130.3	61.111	72	28	0	44	115	9	80	1.15e-27	104
MsaG041605	AT3G27785.1	42.593	108	59	2	9	115	184	289	1.38e-27	107
MsaG041605	AT5G59780.2	61.972	71	27	0	45	115	20	90	1.80e-27	103
MsaG041605	AT3G46130.4	61.972	71	27	0	45	115	20	90	2.69e-27	103
MsaG041605	AT4G18770.1	44.037	109	58	2	9	116	212	318	3.93e-27	106
MsaG041605	AT5G58850.1	45.631	103	53	2	14	115	105	205	4.29e-27	106
MsaG041605	AT3G53200.2	59.155	71	29	0	45	115	9	79	5.77e-27	101
MsaG041605	AT5G11510.2	35.669	157	93	4	11	163	78	230	1.11e-26	106
MsaG041605	AT5G11510.3	36.364	154	90	4	14	163	81	230	1.19e-26	106
MsaG041605	AT5G11510.1	36.364	154	90	4	14	163	81	230	1.19e-26	106
MsaG041605	AT5G11510.4	36.364	154	90	4	14	163	81	230	1.19e-26	106
MsaG041605	AT5G11510.5	35.669	157	93	4	11	163	78	230	1.27e-26	106
MsaG041605	AT1G22640.3	65.152	66	23	0	58	123	1	66	1.27e-26	100
MsaG041605	AT5G67300.1	49.515	103	49	2	14	115	6	106	1.43e-26	103
MsaG041605	AT5G02320.3	44.737	114	57	3	14	123	67	178	1.55e-26	105
MsaG041605	AT5G02320.1	44.737	114	57	3	14	123	127	238	1.65e-26	105
MsaG041605	AT5G02320.2	44.737	114	57	3	14	123	127	238	1.65e-26	105
MsaG041605	AT2G39880.1	45.161	124	64	3	9	131	46	166	2.57e-26	103
MsaG041605	AT1G69560.1	44.828	116	58	3	2	116	98	208	3.43e-26	102
MsaG041605	AT1G69560.2	44.828	116	58	3	2	116	114	224	3.85e-26	102
MsaG041605	AT3G09370.2	47.573	103	51	2	14	115	135	235	6.92e-26	103
MsaG041605	AT3G09370.1	47.573	103	51	2	14	115	130	230	8.16e-26	103
MsaG041605	AT3G09370.3	47.573	103	51	2	14	115	143	243	1.09e-25	103
MsaG041605	AT3G50060.1	49.515	103	49	2	14	115	6	106	1.10e-25	100
MsaG041605	AT1G26780.1	44.444	108	57	2	14	120	98	203	2.21e-25	99.4
MsaG041605	AT3G09230.1	47.273	110	54	3	9	117	51	157	2.32e-25	101
MsaG041605	AT3G55730.1	50.000	108	50	3	9	115	52	156	2.54e-25	101
MsaG041605	AT4G37260.1	44.737	114	59	3	8	120	8	118	3.28e-25	99.8
MsaG041605	AT1G26780.2	44.860	107	56	2	14	119	98	202	4.44e-25	100
MsaG041605	AT4G32730.5	43.925	107	57	2	14	119	87	191	5.05e-25	101
MsaG041605	AT4G32730.4	43.925	107	57	2	14	119	87	191	5.05e-25	101
MsaG041605	AT4G32730.3	43.925	107	57	2	14	119	87	191	5.05e-25	101
MsaG041605	AT4G32730.2	43.925	107	57	2	14	119	87	191	5.05e-25	101
MsaG041605	AT4G32730.1	43.925	107	57	2	14	119	87	191	6.59e-25	101
MsaG041605	AT1G17950.1	45.631	103	53	2	14	115	5	105	1.77e-24	96.3
MsaG041605	AT1G18960.1	40.769	130	66	6	5	131	4	125	7.96e-24	95.9
MsaG041605	AT2G23290.1	46.602	103	52	2	14	115	13	113	1.31e-23	95.1
MsaG041605	AT1G66380.3	58.442	77	32	0	39	115	2	78	1.91e-23	89.7
MsaG041605	AT1G73410.1	46.602	103	52	2	14	115	6	106	2.44e-23	93.2
MsaG041605	AT1G73410.2	46.602	103	52	2	14	115	6	106	2.83e-23	92.0
MsaG041605	AT4G33450.1	44.860	107	55	3	2	106	6	110	3.08e-22	90.5
MsaG041605	AT2G25230.1	37.383	107	64	2	9	114	21	125	9.54e-22	89.0
MsaG041605	AT1G71030.2	52.703	74	35	0	51	124	5	78	9.88e-22	87.4
MsaG041605	AT1G71030.1	50.617	81	39	1	44	124	13	92	1.17e-21	87.8
MsaG041605	AT5G14750.4	59.322	59	24	0	58	116	1	59	1.84e-21	85.9
MsaG041605	AT5G14750.2	59.322	59	24	0	58	116	1	59	1.84e-21	85.9
MsaG041605	AT3G29020.1	40.385	104	59	2	14	116	65	166	2.33e-21	87.8
MsaG041605	AT3G29020.2	40.385	104	59	2	14	116	67	168	4.09e-21	88.6
MsaG041605	AT5G17800.1	37.931	116	71	1	1	116	80	194	6.61e-21	88.2
MsaG041605	AT3G23250.2	57.627	59	25	0	58	116	1	59	2.48e-20	85.1
MsaG041605	AT4G00540.2	37.500	136	73	4	12	137	101	234	2.58e-20	87.4
MsaG041605	AT1G66380.2	53.846	78	36	0	12	89	8	85	2.95e-20	81.6
MsaG041605	AT4G00540.1	37.500	136	73	4	12	137	99	232	4.03e-20	87.0
MsaG041605	AT2G02820.3	40.708	113	65	2	4	115	19	130	1.30e-19	84.7
MsaG041605	AT2G02820.1	40.708	113	65	2	4	115	19	130	1.38e-19	85.5
MsaG041605	AT2G02820.2	40.708	113	65	2	4	115	19	130	1.62e-19	85.5
MsaG041605	AT5G40430.1	36.449	107	64	3	9	114	49	152	4.73e-18	79.3
MsaG041605	AT1G14350.2	41.414	99	57	1	17	115	28	125	8.14e-18	80.5
MsaG041605	AT1G14350.1	41.414	99	57	1	17	115	28	125	8.14e-18	80.5
MsaG041605	AT2G37630.1	38.384	99	59	1	13	109	3	101	2.03e-16	76.3
MsaG041605	AT5G39700.1	32.576	132	86	2	4	133	46	176	1.71e-15	71.2
MsaG041605	AT4G25560.2	61.702	47	18	0	71	117	3	49	4.93e-13	65.5
MsaG041605	AT5G59780.1	58.140	43	18	0	73	115	4	46	1.12e-12	63.5
MsaG041605	AT3G46130.2	58.140	43	18	0	73	115	4	46	1.68e-12	63.5
MsaG041605	AT1G14350.3	48.333	60	31	0	56	115	23	82	2.94e-12	64.7
MsaG041605	AT1G14350.4	48.333	60	31	0	56	115	23	82	2.94e-12	64.7
MsaG041605	AT5G61420.1	55.814	43	19	0	81	123	2	44	4.46e-12	63.5
MsaG041605	AT3G18100.3	30.556	108	69	2	6	108	485	591	1.26e-11	62.8
MsaG041605	AT3G18100.1	30.556	108	69	2	6	108	533	639	1.26e-11	62.8
MsaG041605	AT3G18100.2	30.556	108	69	2	6	108	320	426	1.63e-11	62.4
MsaG041605	AT3G18100.4	30.556	108	69	2	6	108	372	478	2.12e-11	62.4
MsaG041605	AT1G74650.3	52.000	50	20	1	77	122	1	50	2.29e-11	61.2
MsaG041605	AT3G28910.2	60.000	40	16	0	77	116	1	40	2.52e-11	60.8

Find 41 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAAGTTTCTTCCCTATAAA+TGG	0.195770	8:-9125036	MsaT041605.1:CDS
CAATAATAATATTGGTTCTA+AGG	0.230278	8:-9125058	MsaT041605.1:CDS
GTAGAACTCCATAGCATTCT+AGG	0.244172	8:-9125464	MsaT041605.1:CDS
TGAAAATTACCTTGTAGTTT+TGG	0.274903	8:+9124946	None:intergenic
AGATTAGGGTTTCCATTTAT+AGG	0.292910	8:+9125024	None:intergenic
ACCTCGTTATCTGTTCTTCC+AGG	0.309637	8:+9125174	None:intergenic
GATTAGGGTTTCCATTTATA+GGG	0.334984	8:+9125025	None:intergenic
TGAAGTTTAGAATGAGATTA+GGG	0.335512	8:+9125010	None:intergenic
AAACTTCCACGTTTCAAATC+AGG	0.335974	8:+9125512	None:intergenic
ATCAAATATATTACAACATA+TGG	0.340760	8:-9125734	MsaT041605.1:CDS
AAGGTCACATTTGTTGGGTT+TGG	0.364563	8:+9122297	None:intergenic
TTGAAGTTTAGAATGAGATT+AGG	0.381599	8:+9125009	None:intergenic
GGGGTGTGAATATCAGAAAA+TGG	0.382798	8:+9125084	None:intergenic
TAAATCAAGGTCACATTTGT+TGG	0.396977	8:+9122291	None:intergenic
AGTTCTGTTCCAAAACTTGC+TGG	0.418979	8:-9125698	MsaT041605.1:intron
AGAAGGTTAAAAGAGGATTA+TGG	0.432664	8:-9125781	MsaT041605.1:CDS
CAACATATGGACATGGTTGT+TGG	0.432781	8:-9125721	MsaT041605.1:CDS
GGGTGTGAATATCAGAAAAT+GGG	0.435941	8:+9125085	None:intergenic
CAGATTGCCAAGCACTTACC+TGG	0.440073	8:-9125192	MsaT041605.1:CDS
GATAGCATAGTTGATCTTCA+TGG	0.440347	8:+9124980	None:intergenic
AGAACCAATATTATTATTGA+AGG	0.442017	8:+9125062	None:intergenic
AAATCAAGGTCACATTTGTT+GGG	0.451675	8:+9122292	None:intergenic
AAGAAGAAAATTCTTTCTCA+TGG	0.466431	8:-9125126	MsaT041605.1:CDS
TCAGAAAATGGGGTGAAAGA+TGG	0.492191	8:+9125096	None:intergenic
GAACCAATATTATTATTGAA+GGG	0.493786	8:+9125063	None:intergenic
TCCATAGCATTCTAGGCAAT+AGG	0.504141	8:-9125457	MsaT041605.1:intron
GAAAGAGTTGCAGATTAAGA+TGG	0.506273	8:-9125550	MsaT041605.1:CDS
AACAAACAGAAGGTTAAAAG+AGG	0.525426	8:-9125788	MsaT041605.1:CDS
ACCTATTGCCTAGAATGCTA+TGG	0.529169	8:+9125456	None:intergenic
CTAAGACCTGATTTGAAACG+TGG	0.553388	8:-9125518	MsaT041605.1:CDS
TGAAACTTATACTTAAATCA+AGG	0.554298	8:+9122278	None:intergenic
AACCAATATTATTATTGAAG+GGG	0.558954	8:+9125064	None:intergenic
ACCAATATTATTATTGAAGG+GGG	0.565661	8:+9125065	None:intergenic
TGTTCTTCCAGGTAAGTGCT+TGG	0.565814	8:+9125185	None:intergenic
ACCTCATCTCCAAAACTACA+AGG	0.586349	8:-9124955	MsaT041605.1:intron
TAAAAGAGGATTATGGTCAC+CGG	0.589178	8:-9125774	MsaT041605.1:CDS
CTCTTGTTGCAACAAACAGA+AGG	0.627227	8:-9125798	MsaT041605.1:CDS
TGTGTAGGTCTGCAAAGATG+TGG	0.651295	8:-9125572	MsaT041605.1:intron
GGTGTGAATATCAGAAAATG+GGG	0.652477	8:+9125086	None:intergenic
TATATTACAACATATGGACA+TGG	0.686586	8:-9125728	MsaT041605.1:CDS
ACCTGGAAGAACAGATAACG+AGG	0.734735	8:-9125175	MsaT041605.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	9122290	9125831	9122290	ID=MsaG041605
Chr8	mRNA	9122290	9125831	9122290	ID=MsaT041605.1;Parent=MsaG041605
Chr8	exon	9122290	9122321	9122290	ID=MsaT041605.1.exon4;Parent=MsaT041605.1
Chr8	CDS	9122290	9122321	9122290	ID=cds.MsaT041605.1;Parent=MsaT041605.1
Chr8	exon	9124956	9125221	9124956	ID=MsaT041605.1.exon3;Parent=MsaT041605.1
Chr8	CDS	9124956	9125221	9124956	ID=cds.MsaT041605.1;Parent=MsaT041605.1
Chr8	exon	9125458	9125587	9125458	ID=MsaT041605.1.exon2;Parent=MsaT041605.1
Chr8	CDS	9125458	9125587	9125458	ID=cds.MsaT041605.1;Parent=MsaT041605.1
Chr8	exon	9125699	9125831	9125699	ID=MsaT041605.1.exon1;Parent=MsaT041605.1
Chr8	CDS	9125699	9125831	9125699	ID=cds.MsaT041605.1;Parent=MsaT041605.1

Gene Sequence

>MsaT041605.1

ATGGGACATCACTCTTGTTGCAACAAACAGAAGGTTAAAAGAGGATTATGGTCACCGGAAGAAGATGAAAAACTCATCAAATATATTACAACATATGGACATGGTTGTTGGAGTTCTGTTCCAAAACTTGCTGGTCTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTCATCAAGAAGCTGCACTCATTGTAGAACTCCATAGCATTCTAGGCAATAGGTGGGCTCAGATTGCCAAGCACTTACCTGGAAGAACAGATAACGAGGTGAAAAACTTTTGGAATTCAAGCATTAAGAAGAAAATTCTTTCTCATGGTATTATTCCATCTTTCACCCCATTTTCTGATATTCACACCCCCTTCAATAATAATATTGGTTCTAAGGAAAGTTTCTTCCCTATAAATGGAAACCCTAATCTCATTCTAAACTTCAATCATCACCATGAAGATCAACTATGCTATCCAACCTCATCTCCAAAACTACAAGTACCAAACCCAACAAATGTGACCTTGATTTAA

Protein sequence

>MsaT041605.1

MGHHSCCNKQKVKRGLWSPEEDEKLIKYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSHQEAALIVELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKILSHGIIPSFTPFSDIHTPFNNNIGSKESFFPINGNPNLILNFNHHHEDQLCYPTSSPKLQVPNPTNVTLI*