Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG041995 | XP_013444681.1 | 96.684 | 965 | 26 | 2 | 1 | 960 | 1 | 964 | 0.0 | 1938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG041995 | sp|Q9SYX2|SPA1_ARATH | 52.345 | 789 | 324 | 11 | 191 | 960 | 274 | 1029 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG041995 | tr|A0A072TNB4|A0A072TNB4_MEDTR | 96.684 | 965 | 26 | 2 | 1 | 960 | 1 | 964 | 0.0 | 1938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG041995 | MtrunA17_Chr8g0347471 | 94.433 | 988 | 26 | 3 | 1 | 960 | 1 | 987 | 0.0 | 1927 |
| MsaG041995 | MtrunA17_Chr5g0396821 | 50.733 | 818 | 310 | 16 | 183 | 960 | 270 | 1034 | 0.0 | 742 |
| MsaG041995 | MtrunA17_Chr2g0317491 | 40.313 | 831 | 402 | 16 | 192 | 960 | 77 | 875 | 2.65e-179 | 542 |
| MsaG041995 | MtrunA17_Chr5g0438901 | 44.886 | 352 | 181 | 3 | 609 | 959 | 336 | 675 | 1.31e-101 | 332 |
| MsaG041995 | MtrunA17_Chr2g0283891 | 25.000 | 268 | 173 | 10 | 645 | 901 | 60 | 310 | 6.50e-15 | 77.0 |
| MsaG041995 | MtrunA17_Chr7g0253861 | 23.485 | 264 | 184 | 8 | 642 | 900 | 51 | 301 | 1.99e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG041995 | AT2G46340.1 | 52.345 | 789 | 324 | 11 | 191 | 960 | 274 | 1029 | 0.0 | 763 |
| MsaG041995 | AT2G46340.2 | 52.345 | 789 | 324 | 11 | 191 | 960 | 274 | 1029 | 0.0 | 763 |
| MsaG041995 | AT4G11110.1 | 48.134 | 777 | 364 | 13 | 187 | 960 | 296 | 1036 | 0.0 | 690 |
| MsaG041995 | AT3G15354.3 | 38.902 | 820 | 399 | 15 | 192 | 960 | 76 | 844 | 0.0 | 559 |
| MsaG041995 | AT3G15354.1 | 38.293 | 820 | 396 | 16 | 192 | 960 | 76 | 836 | 1.50e-178 | 540 |
| MsaG041995 | AT1G53090.3 | 42.057 | 661 | 335 | 11 | 334 | 960 | 148 | 794 | 1.46e-168 | 512 |
| MsaG041995 | AT1G53090.1 | 42.057 | 661 | 335 | 11 | 334 | 960 | 148 | 794 | 1.46e-168 | 512 |
| MsaG041995 | AT1G53090.2 | 42.057 | 661 | 335 | 11 | 334 | 960 | 148 | 794 | 1.46e-168 | 512 |
| MsaG041995 | AT3G15354.4 | 43.428 | 601 | 286 | 10 | 407 | 960 | 1 | 594 | 1.10e-159 | 482 |
| MsaG041995 | AT3G15354.5 | 43.428 | 601 | 286 | 10 | 407 | 960 | 1 | 594 | 1.10e-159 | 482 |
| MsaG041995 | AT1G53090.4 | 43.271 | 587 | 286 | 10 | 407 | 960 | 1 | 573 | 7.27e-157 | 474 |
| MsaG041995 | AT3G15354.2 | 33.333 | 630 | 322 | 13 | 192 | 770 | 76 | 658 | 4.43e-106 | 344 |
| MsaG041995 | AT2G32950.2 | 40.741 | 432 | 224 | 5 | 531 | 959 | 158 | 560 | 9.85e-105 | 337 |
| MsaG041995 | AT2G32950.1 | 40.741 | 432 | 224 | 5 | 531 | 959 | 271 | 673 | 2.80e-103 | 337 |
| MsaG041995 | AT1G53090.5 | 35.941 | 473 | 259 | 9 | 334 | 772 | 148 | 610 | 1.14e-88 | 296 |
| MsaG041995 | AT5G23730.1 | 35.417 | 336 | 176 | 14 | 647 | 956 | 41 | 361 | 2.45e-45 | 168 |
| MsaG041995 | AT5G52250.1 | 33.129 | 326 | 192 | 9 | 644 | 957 | 69 | 380 | 1.12e-44 | 166 |
| MsaG041995 | AT1G29260.1 | 26.906 | 223 | 141 | 8 | 697 | 910 | 108 | 317 | 5.31e-14 | 74.7 |
| MsaG041995 | AT2G43770.1 | 25.987 | 304 | 195 | 13 | 642 | 929 | 48 | 337 | 3.84e-13 | 72.4 |
Find 152 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTTTGCACTCAAATTT+TGG | 0.148667 | 8:-15155684 | None:intergenic |
| GTATATATTTAAACAGATTT+TGG | 0.151402 | 8:+15155438 | MsaT041995.1:CDS |
| GAGTCAATCGATCCCATTTC+TGG | 0.201090 | 8:+15158722 | MsaT041995.1:CDS |
| GCTTGTGACTTAACCTTTAG+AGG | 0.222312 | 8:+15158121 | MsaT041995.1:CDS |
| TTTCGTTGGTTTATCTGTTT+TGG | 0.225023 | 8:+15158243 | MsaT041995.1:CDS |
| GTTTCCTCATTGAGCACTTC+TGG | 0.244572 | 8:-15155910 | None:intergenic |
| TACATTTGCCGGGCTCATTA+TGG | 0.274147 | 8:-15157858 | None:intergenic |
| CTAGATTATGCACACCTATT+AGG | 0.295650 | 8:+15154876 | MsaT041995.1:CDS |
| TGAATTTATACGCGAATTAG+AGG | 0.317112 | 8:+15156555 | MsaT041995.1:CDS |
| ATAGAACCTTGAATTCTCTT+TGG | 0.319753 | 8:-15157018 | None:intergenic |
| CAGCTTCCTTGAGCGGGCCT+TGG | 0.322871 | 8:-15156918 | None:intergenic |
| AAGAACTTGAATGTAGCTTT+AGG | 0.326233 | 8:+15155028 | MsaT041995.1:CDS |
| GAACAGACCAAGCTCTCTTT+TGG | 0.329939 | 8:-15157542 | None:intergenic |
| AAGAGAATTCAAGGTTCTAT+TGG | 0.336597 | 8:+15157021 | MsaT041995.1:CDS |
| TTATTCCTAACAATGTGTTT+AGG | 0.343156 | 8:-15155004 | None:intergenic |
| CATCACTTCAACTGTATTCA+TGG | 0.343911 | 8:+15155745 | MsaT041995.1:CDS |
| GAATTAGAGGCATCAAATTC+TGG | 0.345543 | 8:+15156568 | MsaT041995.1:CDS |
| ACTGTTTGAATGACCAGAAA+TGG | 0.347885 | 8:-15158735 | None:intergenic |
| TGATTATGATGGTGTGGTTC+AGG | 0.361466 | 8:+15157347 | MsaT041995.1:CDS |
| TGAACACAACATACATTTGC+CGG | 0.363554 | 8:-15157869 | None:intergenic |
| CGTATTTAAGTCATGCCTTA+AGG | 0.365621 | 8:+15155603 | MsaT041995.1:CDS |
| TTGGGACGAGAAGACGGTTC+AGG | 0.365927 | 8:-15156365 | None:intergenic |
| AGTTTGTTTCTAGTGTCTGC+TGG | 0.369423 | 8:+15158774 | MsaT041995.1:CDS |
| TTTGCTTCCTTAGCTGGATC+TGG | 0.370766 | 8:+15154947 | MsaT041995.1:CDS |
| TCATCAAATGTTTATAGCCT+TGG | 0.380641 | 8:+15155943 | MsaT041995.1:CDS |
| TCTAGTTATCCTCAAGTGTT+AGG | 0.396169 | 8:+15155286 | MsaT041995.1:CDS |
| CTAATAGGTGTGCATAATCT+AGG | 0.402336 | 8:-15154875 | None:intergenic |
| CAAGGTTCTATTGGTTGTCT+AGG | 0.404862 | 8:+15157030 | MsaT041995.1:CDS |
| AAGGAAAATGCCTTGGGAAC+AGG | 0.405545 | 8:+15155648 | MsaT041995.1:CDS |
| ATGATTGTTCTGTCAAACTA+TGG | 0.406776 | 8:+15157607 | MsaT041995.1:CDS |
| CAGATCCTAAACACATTGTT+AGG | 0.406890 | 8:+15154999 | MsaT041995.1:CDS |
| ATTTAGAGAATGTTGGTAAT+GGG | 0.407051 | 8:+15156995 | MsaT041995.1:CDS |
| TAGATTAAGCAAAGGACAAA+AGG | 0.409406 | 8:+15155150 | MsaT041995.1:CDS |
| CTGATAACTCTTTGAAGCTA+TGG | 0.412942 | 8:+15158059 | MsaT041995.1:CDS |
| AAAAGGGAATTGATTCTAGA+AGG | 0.422294 | 8:+15155167 | MsaT041995.1:CDS |
| TCCATTACTATGACCTCTAA+AGG | 0.429752 | 8:-15158134 | None:intergenic |
| TTCATCTCGGTCAAAACTTA+AGG | 0.439646 | 8:-15157157 | None:intergenic |
| GCTTCATCAACAAATGAACT+TGG | 0.444776 | 8:-15156841 | None:intergenic |
| TGCAGGTCATGATGGCCTTA+AGG | 0.446031 | 8:-15155618 | None:intergenic |
| TGTTCCATTGCAGGTCATGA+TGG | 0.451431 | 8:-15155626 | None:intergenic |
| TTCGTAACACTAAAATTCCT+TGG | 0.455018 | 8:+15157960 | MsaT041995.1:CDS |
| TTGCATATACCTTCATAGAA+AGG | 0.456350 | 8:-15157054 | None:intergenic |
| TGAAGAGACAGCATCTCTTA+AGG | 0.463340 | 8:+15155717 | MsaT041995.1:CDS |
| ACCTTTAGAGGTCATAGTAA+TGG | 0.463606 | 8:+15158133 | MsaT041995.1:CDS |
| AAAGAAAGGCTGTGCGTTGA+TGG | 0.465033 | 8:+15155805 | MsaT041995.1:CDS |
| TTGTTTGACATCTCGACGAC+GGG | 0.470055 | 8:-15157267 | None:intergenic |
| ATTCTTCATAATGTGATGTC+TGG | 0.471326 | 8:+15155334 | MsaT041995.1:CDS |
| CATTTAGAGAATGTTGGTAA+TGG | 0.473306 | 8:+15156994 | MsaT041995.1:CDS |
| TGTCTAGGACCTTTCTATGA+AGG | 0.475887 | 8:+15157045 | MsaT041995.1:CDS |
| ATTAGGAAGGAAAATGTGAT+TGG | 0.478880 | 8:+15154893 | MsaT041995.1:CDS |
| GCTGTGCAATATTGAGTCAT+TGG | 0.479826 | 8:+15156238 | MsaT041995.1:CDS |
| TTTCTTCTCCAGAATTTCGT+TGG | 0.480988 | 8:+15158229 | MsaT041995.1:intron |
| CGGCTGCAGCTTCCTTGAGC+GGG | 0.481237 | 8:-15156924 | None:intergenic |
| TTACTGGAAGAATCATGATA+AGG | 0.482569 | 8:-15156799 | None:intergenic |
| ATTCCTTGGTGTACGTTACC+TGG | 0.484841 | 8:+15157974 | MsaT041995.1:CDS |
| GAGAAAACAGTGAAGGGAAA+GGG | 0.487106 | 8:+15155310 | MsaT041995.1:CDS |
| GCGGCTGCAGCTTCCTTGAG+CGG | 0.488025 | 8:-15156925 | None:intergenic |
| TAAGACATGACAGCAAATAG+TGG | 0.492429 | 8:+15154800 | None:intergenic |
| CTGTTTGAATGACCAGAAAT+GGG | 0.492430 | 8:-15158734 | None:intergenic |
| TAAATGAGGCAATCTCCATC+TGG | 0.493793 | 8:-15156977 | None:intergenic |
| ATGGAACAAGGAAAATGCCT+TGG | 0.493894 | 8:+15155641 | MsaT041995.1:CDS |
| CGTCTTCTCGTCCCAATGCC+AGG | 0.500329 | 8:+15156372 | MsaT041995.1:CDS |
| AGAGAAAACAGTGAAGGGAA+AGG | 0.500835 | 8:+15155309 | MsaT041995.1:CDS |
| CTTGTTGCAGCCAACTCAGT+TGG | 0.503279 | 8:+15158815 | MsaT041995.1:CDS |
| AATGGGCCAAAGAGAATTCA+AGG | 0.506547 | 8:+15157012 | MsaT041995.1:CDS |
| AATCAAGGGTTGATAAAGAA+AGG | 0.507494 | 8:+15155791 | MsaT041995.1:CDS |
| TTGTGAGAAGCCATTGGCAC+TGG | 0.508051 | 8:-15158695 | None:intergenic |
| CAAAGCTCAGTTGTGTGTGC+TGG | 0.508113 | 8:+15157292 | MsaT041995.1:CDS |
| TGGATTCAGATGTGGGATGC+AGG | 0.508695 | 8:+15157486 | MsaT041995.1:intron |
| TTGTTTGAACGAAGATATCA+AGG | 0.514100 | 8:+15156711 | MsaT041995.1:CDS |
| CAGATGTGGGATGCAGGCAC+TGG | 0.514655 | 8:+15157492 | MsaT041995.1:intron |
| TCACAAAATGCAAAGGAAGC+TGG | 0.517461 | 8:+15156320 | MsaT041995.1:CDS |
| TGATAACTCTTTGAAGCTAT+GGG | 0.517563 | 8:+15158060 | MsaT041995.1:CDS |
| GTAGAAAGAAATCATTCGTA+TGG | 0.520653 | 8:+15156736 | MsaT041995.1:CDS |
| TGGGACGAGAAGACGGTTCA+GGG | 0.523315 | 8:-15156364 | None:intergenic |
| TTGCCTCATTTAGAGAATGT+TGG | 0.524574 | 8:+15156988 | MsaT041995.1:CDS |
| TTGAATAAGATTAAGTACAT+TGG | 0.525263 | 8:+15155535 | MsaT041995.1:CDS |
| CGGAGCACCAAAAGAGAGCT+TGG | 0.525737 | 8:+15157535 | MsaT041995.1:CDS |
| TTTGGTCATCAAACACATGT+TGG | 0.526232 | 8:-15155567 | None:intergenic |
| ATCTAGGTGACCTTGGCAAA+GGG | 0.528356 | 8:-15154859 | None:intergenic |
| TTACCAACATTCTCTAAATG+AGG | 0.528415 | 8:-15156991 | None:intergenic |
| TCGAATTTGTGAGAAGCCAT+TGG | 0.529274 | 8:-15158701 | None:intergenic |
| TGGAACAAGGAAAATGCCTT+GGG | 0.536920 | 8:+15155642 | MsaT041995.1:CDS |
| AATCTAGGTGACCTTGGCAA+AGG | 0.538083 | 8:-15154860 | None:intergenic |
| TTTCACAATTCCAACTGAGT+TGG | 0.539152 | 8:-15158825 | None:intergenic |
| CAATTCAGTTTGAAGAGAAG+TGG | 0.541430 | 8:+15155878 | MsaT041995.1:CDS |
| CTTAAGGCATGACTTAAATA+CGG | 0.542841 | 8:-15155602 | None:intergenic |
| TACTTCTCCATGAGATTCCA+AGG | 0.543464 | 8:+15156901 | MsaT041995.1:CDS |
| AGATTAAGCAAAGGACAAAA+GGG | 0.544395 | 8:+15155151 | MsaT041995.1:CDS |
| TTAGGAGAGAAAACAGTGAA+GGG | 0.548507 | 8:+15155304 | MsaT041995.1:CDS |
| AAGGCCATCATGACCTGCAA+TGG | 0.548595 | 8:+15155622 | MsaT041995.1:CDS |
| GAGCGGGCCTTGGAATCTCA+TGG | 0.550025 | 8:-15156908 | None:intergenic |
| ACACTCTCAAGGGTTTGTCT+TGG | 0.554478 | 8:+15155477 | MsaT041995.1:CDS |
| ATGTACTTAATCTTATTCAA+AGG | 0.557510 | 8:-15155532 | None:intergenic |
| TATAGGAACCATAATGAGCC+CGG | 0.558322 | 8:+15157850 | MsaT041995.1:CDS |
| GTTAGGAGAGAAAACAGTGA+AGG | 0.558766 | 8:+15155303 | MsaT041995.1:CDS |
| GATGAAGACTACATTGCAGC+AGG | 0.559814 | 8:+15157174 | MsaT041995.1:CDS |
| TGATGCTGCCTAAAATTATG+TGG | 0.562310 | 8:-15155058 | None:intergenic |
| TGGTGTACGTTACCTGGTCA+TGG | 0.568540 | 8:+15157980 | MsaT041995.1:CDS |
| AAGCAGTGATAAAAGTGTGA+TGG | 0.568908 | 8:+15156951 | MsaT041995.1:CDS |
| AGAACAATCATCACTTCCAC+TGG | 0.572949 | 8:-15157595 | None:intergenic |
| CTGGCATCTACTGATTATGA+TGG | 0.573907 | 8:+15157336 | MsaT041995.1:CDS |
| GAACACAACATACATTTGCC+GGG | 0.576087 | 8:-15157868 | None:intergenic |
| GAGATTCCAAGGCCCGCTCA+AGG | 0.576812 | 8:+15156912 | MsaT041995.1:CDS |
| AAAGTGTGATGGAAACCAGA+TGG | 0.581140 | 8:+15156962 | MsaT041995.1:CDS |
| GTGCATAATCTAGGTGACCT+TGG | 0.583099 | 8:-15154866 | None:intergenic |
| AACAATGTGTTTAGGATCTG+TGG | 0.583202 | 8:-15154996 | None:intergenic |
| TAGAGGTCATAGTAATGGAA+AGG | 0.585254 | 8:+15158138 | MsaT041995.1:CDS |
| CTGCAATGTAGTCTTCATCT+CGG | 0.585567 | 8:-15157170 | None:intergenic |
| TCATGACCTGCAATGGAACA+AGG | 0.588932 | 8:+15155629 | MsaT041995.1:CDS |
| CAAATCTCTACCAGTGCCAA+TGG | 0.588939 | 8:+15158685 | MsaT041995.1:CDS |
| ATCTACTGATTATGATGGTG+TGG | 0.590834 | 8:+15157341 | MsaT041995.1:CDS |
| AGGAGGTCCAGATCCAGCTA+AGG | 0.590988 | 8:-15154954 | None:intergenic |
| CTGGCATTGGGACGAGAAGA+CGG | 0.594491 | 8:-15156371 | None:intergenic |
| ATGACAGCAAATAGTGGGAG+AGG | 0.595178 | 8:+15154806 | MsaT041995.1:CDS |
| TTGGATGGATACATTGCATG+TGG | 0.600527 | 8:+15158262 | MsaT041995.1:CDS |
| TCGGCTGATTACAAAGTGTA+CGG | 0.605940 | 8:+15157929 | MsaT041995.1:CDS |
| TTGTTTCTAGTGTCTGCTGG+AGG | 0.606239 | 8:+15158777 | MsaT041995.1:CDS |
| CATAATCAGTAGATGCCAGA+TGG | 0.607853 | 8:-15157332 | None:intergenic |
| GGCGATAAGACGAAACAAGA+CGG | 0.609452 | 8:-15155511 | None:intergenic |
| AAGACATGACAGCAAATAGT+GGG | 0.611577 | 8:+15154801 | None:intergenic |
| CTAACAGCTTTACCATGACC+AGG | 0.613394 | 8:-15157992 | None:intergenic |
| GCACAGGTATCCTGTTCCCA+AGG | 0.614629 | 8:-15155658 | None:intergenic |
| AGATAGTTCAATTGTGACGA+TGG | 0.620791 | 8:-15156775 | None:intergenic |
| ATTATGCACACCTATTAGGA+AGG | 0.620818 | 8:+15154880 | MsaT041995.1:CDS |
| GTTTCTATCACAAAATGCAA+AGG | 0.621901 | 8:+15156313 | MsaT041995.1:CDS |
| AATTGTGAAACTACTTCAGA+TGG | 0.626139 | 8:+15158838 | MsaT041995.1:CDS |
| ATAAAGTGAAGAAATCAGAA+AGG | 0.626505 | 8:+15155413 | MsaT041995.1:CDS |
| TTTGTTTGACATCTCGACGA+CGG | 0.632482 | 8:-15157268 | None:intergenic |
| GAAGACTACATTGCAGCAGG+TGG | 0.632505 | 8:+15157177 | MsaT041995.1:CDS |
| ACTTAAGGCGCATATCACAT+TGG | 0.635222 | 8:-15157142 | None:intergenic |
| TGCTGCCTAAAATTATGTGG+AGG | 0.638027 | 8:-15155055 | None:intergenic |
| AAATCAATGACCCTTTGCCA+AGG | 0.639148 | 8:+15154849 | MsaT041995.1:CDS |
| TCATAATGTGATGTCTGGCG+TGG | 0.648364 | 8:+15155339 | MsaT041995.1:CDS |
| TACAGCAAGTTCGAAGAGCG+CGG | 0.652487 | 8:+15157087 | MsaT041995.1:CDS |
| GCTGCCTAAAATTATGTGGA+GGG | 0.654944 | 8:-15155054 | None:intergenic |
| ATGTGGTTCAGAATCTAATG+AGG | 0.656979 | 8:+15158279 | MsaT041995.1:CDS |
| ACAAGCATCAGATGACAACT+CGG | 0.657385 | 8:-15158104 | None:intergenic |
| AATCACTTGAAATAGCATTG+AGG | 0.657781 | 8:-15157227 | None:intergenic |
| ATGGACTCAACTTAAGAGCG+TGG | 0.658372 | 8:+15155374 | MsaT041995.1:CDS |
| TAGCTTCAAAGAGTTATCAG+TGG | 0.667175 | 8:-15158056 | None:intergenic |
| AAATCACTTAGATTAAGCAA+AGG | 0.669333 | 8:+15155142 | MsaT041995.1:CDS |
| TTGTCCAGAAGTGCTCAATG+AGG | 0.673641 | 8:+15155906 | MsaT041995.1:CDS |
| TCAGCCACTGTCTCAATACA+CGG | 0.673768 | 8:+15157515 | MsaT041995.1:CDS |
| TCAAACAGTAGTGATAACAA+TGG | 0.675011 | 8:+15158749 | MsaT041995.1:CDS |
| AATGTGTTTAGGATCTGTGG+TGG | 0.700851 | 8:-15154993 | None:intergenic |
| AGATGATGTAGCTGACACAC+AGG | 0.702078 | 8:+15156615 | MsaT041995.1:CDS |
| TGTTTGACATCTCGACGACG+GGG | 0.706101 | 8:-15157266 | None:intergenic |
| TGCTCCGTGTATTGAGACAG+TGG | 0.719956 | 8:-15157519 | None:intergenic |
| TGACCAGGTAACGTACACCA+AGG | 0.738718 | 8:-15157977 | None:intergenic |
| TTTGAACGAAGATATCAAGG+AGG | 0.768052 | 8:+15156714 | MsaT041995.1:CDS |
| CAAACTATGGAATATCAGCG+AGG | 0.779696 | 8:+15157620 | MsaT041995.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 15154806 | 15158865 | 15154806 | ID=MsaG041995 |
| Chr8 | mRNA | 15154806 | 15158865 | 15154806 | ID=MsaT041995.1;Parent=MsaG041995 |
| Chr8 | exon | 15154806 | 15155981 | 15154806 | ID=MsaT041995.1.exon1;Parent=MsaT041995.1 |
| Chr8 | CDS | 15154806 | 15155981 | 15154806 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15156236 | 15156393 | 15156236 | ID=MsaT041995.1.exon2;Parent=MsaT041995.1 |
| Chr8 | CDS | 15156236 | 15156393 | 15156236 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15156540 | 15157368 | 15156540 | ID=MsaT041995.1.exon3;Parent=MsaT041995.1 |
| Chr8 | CDS | 15156540 | 15157368 | 15156540 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15157495 | 15157641 | 15157495 | ID=MsaT041995.1.exon4;Parent=MsaT041995.1 |
| Chr8 | CDS | 15157495 | 15157641 | 15157495 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15157842 | 15158159 | 15157842 | ID=MsaT041995.1.exon5;Parent=MsaT041995.1 |
| Chr8 | CDS | 15157842 | 15158159 | 15157842 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15158241 | 15158300 | 15158241 | ID=MsaT041995.1.exon6;Parent=MsaT041995.1 |
| Chr8 | CDS | 15158241 | 15158300 | 15158241 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Chr8 | exon | 15158671 | 15158865 | 15158671 | ID=MsaT041995.1.exon7;Parent=MsaT041995.1 |
| Chr8 | CDS | 15158671 | 15158865 | 15158671 | ID=cds.MsaT041995.1;Parent=MsaT041995.1 |
| Gene Sequence |
| Protein sequence |