AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG042654

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG042654 MtrunA17_Chr8g0354661 96.520 546 19 0 1 546 1 546 0.0 1101
MsaG042654 MtrunA17_Chr3g0080861 53.519 540 214 9 2 528 1 516 0.0 523
MsaG042654 MtrunA17_Chr3g0099131 81.739 115 21 0 37 151 41 155 4.31e-61 210
MsaG042654 MtrunA17_Chr2g0322521 76.860 121 28 0 37 157 29 149 1.20e-58 200
MsaG042654 MtrunA17_Chr1g0154031 70.968 124 36 0 37 160 76 199 9.90e-57 195
MsaG042654 MtrunA17_Chr1g0192411 65.789 114 39 0 35 148 10 123 2.30e-46 167
MsaG042654 MtrunA17_Chr8g0349261 66.667 105 34 1 37 140 13 117 2.43e-45 161
MsaG042654 MtrunA17_Chr5g0410961 63.208 106 39 0 35 140 10 115 7.07e-45 161
MsaG042654 MtrunA17_Chr1g0203411 59.504 121 47 1 33 153 10 128 2.17e-44 159
MsaG042654 MtrunA17_Chr4g0039971 66.346 104 35 0 37 140 13 116 3.26e-44 160
MsaG042654 MtrunA17_Chr3g0099141 78.313 83 18 0 37 119 40 122 3.78e-43 150
MsaG042654 MtrunA17_Chr7g0228231 62.136 103 39 0 37 139 14 116 5.60e-43 152
MsaG042654 MtrunA17_Chr2g0281071 62.500 104 39 0 37 140 13 116 5.64e-43 156
MsaG042654 MtrunA17_Chr7g0261281 63.462 104 38 0 37 140 12 115 5.93e-43 154
MsaG042654 MtrunA17_Chr5g0395281 39.111 225 117 6 37 253 12 224 9.15e-43 155
MsaG042654 MtrunA17_Chr4g0037141 52.555 137 55 1 39 165 14 150 9.99e-43 154
MsaG042654 MtrunA17_Chr4g0048511 61.538 104 40 0 37 140 13 116 1.41e-42 155
MsaG042654 MtrunA17_Chr3g0110351 60.377 106 42 0 37 142 12 117 1.58e-42 154
MsaG042654 MtrunA17_Chr1g0167691 61.538 104 40 0 37 140 12 115 1.77e-42 152
MsaG042654 MtrunA17_Chr1g0187761 61.538 104 40 0 37 140 12 115 2.16e-42 152
MsaG042654 MtrunA17_Chr2g0323411 61.818 110 41 1 37 145 12 121 2.44e-42 154
MsaG042654 MtrunA17_Chr5g0434571 60.377 106 42 0 37 142 48 153 3.85e-42 154
MsaG042654 MtrunA17_Chr7g0274581 58.654 104 43 0 37 140 12 115 4.17e-42 150
MsaG042654 MtrunA17_Chr7g0228891 37.600 250 132 8 37 272 12 251 4.31e-42 152
MsaG042654 MtrunA17_Chr1g0209661 52.991 117 55 0 26 142 16 132 4.86e-42 153
MsaG042654 MtrunA17_Chr3g0131121 65.686 102 35 0 39 140 14 115 4.93e-42 152
MsaG042654 MtrunA17_Chr1g0167661 61.538 104 40 0 37 140 12 115 6.96e-42 150
MsaG042654 MtrunA17_Chr6g0450101 61.165 103 40 0 37 139 14 116 7.40e-42 149
MsaG042654 MtrunA17_Chr3g0115821 61.538 104 40 0 37 140 12 115 8.54e-42 153
MsaG042654 MtrunA17_Chr8g0385321 63.725 102 37 0 39 140 14 115 1.56e-41 152
MsaG042654 MtrunA17_Chr1g0194301 56.481 108 47 0 35 142 31 138 3.62e-41 149
MsaG042654 MtrunA17_Chr1g0186061 60.952 105 41 0 38 142 21 125 5.27e-41 148
MsaG042654 MtrunA17_Chr1g0193371 61.321 106 41 0 37 142 12 117 5.48e-41 152
MsaG042654 MtrunA17_Chr4g0068061 59.434 106 43 0 35 140 10 115 5.53e-41 150
MsaG042654 MtrunA17_Chr1g0168661 56.522 115 46 1 32 142 12 126 8.67e-41 148
MsaG042654 MtrunA17_Chr4g0057031 60.577 104 41 0 37 140 12 115 1.14e-40 148
MsaG042654 MtrunA17_Chr1g0193801 62.264 106 40 0 37 142 12 117 1.27e-40 151
MsaG042654 MtrunA17_Chr7g0270891 61.321 106 41 0 37 142 12 117 1.30e-40 150
MsaG042654 MtrunA17_Chr4g0060721 60.577 104 41 0 37 140 13 116 1.32e-40 149
MsaG042654 MtrunA17_Chr6g0453211 64.646 99 35 0 37 135 12 110 2.47e-40 148
MsaG042654 MtrunA17_Chr8g0346561 58.491 106 44 0 35 140 10 115 2.50e-40 148
MsaG042654 MtrunA17_Chr2g0309911 58.654 104 43 0 37 140 11 114 2.60e-40 148
MsaG042654 MtrunA17_Chr2g0328771 57.547 106 45 0 37 142 20 125 2.69e-40 148
MsaG042654 MtrunA17_Chr7g0217741 58.491 106 44 0 35 140 10 115 2.75e-40 148
MsaG042654 MtrunA17_Chr3g0121241 57.547 106 45 0 35 140 40 145 2.96e-40 148
MsaG042654 MtrunA17_Chr4g0042671 59.091 110 44 1 37 145 12 121 6.21e-40 149
MsaG042654 MtrunA17_Chr7g0275911 56.731 104 45 0 37 140 12 115 7.52e-40 145
MsaG042654 MtrunA17_Chr6g0453471 59.615 104 42 0 37 140 12 115 8.99e-40 148
MsaG042654 MtrunA17_Chr7g0217221 58.491 106 44 0 37 142 12 117 1.69e-39 145
MsaG042654 MtrunA17_Chr4g0022931 58.654 104 43 0 37 140 13 116 3.19e-39 144
MsaG042654 MtrunA17_Chr1g0180391 47.518 141 72 1 27 165 9 149 4.70e-39 142
MsaG042654 MtrunA17_Chr4g0022901 58.654 104 43 0 37 140 13 116 4.74e-39 144
MsaG042654 MtrunA17_Chr1g0194291 58.416 101 42 0 37 137 21 121 5.59e-39 143
MsaG042654 MtrunA17_Chr1g0211161 58.654 104 43 0 37 140 13 116 5.96e-39 142
MsaG042654 MtrunA17_Chr3g0092401 56.481 108 47 0 35 142 11 118 6.03e-39 144
MsaG042654 MtrunA17_Chr4g0022911 57.692 104 44 0 37 140 13 116 7.33e-39 144
MsaG042654 MtrunA17_Chr5g0435101 56.731 104 45 0 37 140 11 114 7.97e-39 141
MsaG042654 MtrunA17_Chr2g0311221 62.626 99 37 0 37 135 14 112 8.71e-39 144
MsaG042654 MtrunA17_Chr2g0330041 57.692 104 44 0 37 140 12 115 8.91e-39 146
MsaG042654 MtrunA17_Chr7g0254411 60.577 104 41 0 37 140 12 115 9.74e-39 144
MsaG042654 MtrunA17_Chr4g0058631 58.654 104 43 0 37 140 12 115 1.53e-38 145
MsaG042654 MtrunA17_Chr3g0117091 58.654 104 43 0 37 140 12 115 1.71e-38 144
MsaG042654 MtrunA17_Chr1g0194951 57.692 104 44 0 37 140 12 115 1.72e-38 145
MsaG042654 MtrunA17_Chr4g0032401 57.692 104 44 0 37 140 17 120 2.24e-38 143
MsaG042654 MtrunA17_Chr4g0070641 56.731 104 45 0 37 140 12 115 2.48e-38 138
MsaG042654 MtrunA17_Chr5g0400821 57.143 105 44 1 37 140 12 116 3.73e-38 142
MsaG042654 MtrunA17_Chr5g0441131 42.353 170 89 4 31 198 3 165 3.77e-38 138
MsaG042654 MtrunA17_Chr8g0387421 55.660 106 47 0 37 142 12 117 4.91e-38 142
MsaG042654 MtrunA17_Chr8g0342541 56.731 104 45 0 37 140 12 115 6.24e-38 142
MsaG042654 MtrunA17_Chr4g0070611 56.731 104 45 0 37 140 12 115 8.82e-38 141
MsaG042654 MtrunA17_Chr4g0022891 54.955 111 46 1 28 138 7 113 1.13e-37 139
MsaG042654 MtrunA17_Chr5g0440781 53.097 113 52 1 38 149 13 125 1.14e-37 137
MsaG042654 MtrunA17_Chr6g0487491 51.282 117 48 2 37 144 12 128 1.38e-37 139
MsaG042654 MtrunA17_Chr8g0342521 57.692 104 44 0 37 140 12 115 1.43e-37 142
MsaG042654 MtrunA17_Chr1g0152011 57.143 105 44 1 37 140 12 116 1.49e-37 141
MsaG042654 MtrunA17_Chr5g0440761 53.097 113 52 1 38 149 13 125 1.93e-37 139
MsaG042654 MtrunA17_Chr5g0441141 53.097 113 52 1 38 149 13 125 2.17e-37 139
MsaG042654 MtrunA17_Chr2g0323351 59.223 103 42 0 37 139 12 114 2.52e-37 138
MsaG042654 MtrunA17_Chr3g0088461 55.769 104 46 0 37 140 22 125 4.04e-37 140
MsaG042654 MtrunA17_Chr7g0271241 62.245 98 37 0 37 134 12 109 4.32e-37 141
MsaG042654 MtrunA17_Chr3g0135311 55.238 105 46 1 37 140 12 116 6.50e-37 140
MsaG042654 MtrunA17_Chr4g0028311 53.704 108 49 1 37 143 12 119 7.05e-37 139
MsaG042654 MtrunA17_Chr5g0397231 57.576 99 42 0 37 135 12 110 8.01e-37 139
MsaG042654 MtrunA17_Chr7g0269831 60.377 106 42 0 35 140 10 115 1.11e-36 139
MsaG042654 MtrunA17_Chr4g0022881 54.902 102 46 0 38 139 13 114 1.41e-36 135
MsaG042654 MtrunA17_Chr4g0044421 55.882 102 45 0 39 140 14 115 2.71e-36 134
MsaG042654 MtrunA17_Chr1g0151941 49.565 115 57 1 37 150 12 126 4.07e-36 135
MsaG042654 MtrunA17_Chr8g0334881 53.271 107 49 1 37 142 10 116 6.38e-36 136
MsaG042654 MtrunA17_Chr2g0327351 58.000 100 41 1 37 135 12 111 8.98e-36 136
MsaG042654 MtrunA17_Chr1g0203441 57.282 103 44 0 38 140 14 116 9.47e-36 134
MsaG042654 MtrunA17_Chr7g0264641 53.333 105 48 1 37 140 12 116 1.60e-35 134
MsaG042654 MtrunA17_Chr5g0417821 56.731 104 45 0 37 140 7 110 2.07e-35 134
MsaG042654 MtrunA17_Chr6g0452271 54.808 104 47 0 37 140 12 115 2.18e-35 135
MsaG042654 MtrunA17_Chr4g0072751 59.000 100 40 1 37 135 12 111 2.31e-35 135
MsaG042654 MtrunA17_Chr4g0013361 44.966 149 75 4 25 171 2 145 2.53e-35 134
MsaG042654 MtrunA17_Chr3g0103281 53.846 104 48 0 37 140 12 115 3.29e-35 134
MsaG042654 MtrunA17_Chr4g0054391 57.576 99 41 1 37 134 12 110 4.10e-35 133
MsaG042654 MtrunA17_Chr8g0343831 53.846 104 48 0 37 140 8 111 8.51e-35 131
MsaG042654 MtrunA17_Chr2g0327821 53.846 104 48 0 37 140 6 109 1.92e-34 130
MsaG042654 MtrunA17_Chr8g0342481 53.333 105 48 1 37 140 12 116 4.12e-34 133
MsaG042654 MtrunA17_Chr2g0293911 47.727 132 62 1 8 139 2 126 6.87e-34 131
MsaG042654 MtrunA17_Chr4g0068921 56.311 103 45 0 37 139 24 126 1.26e-33 126
MsaG042654 MtrunA17_Chr4g0055981 51.923 104 50 0 37 140 55 158 3.92e-33 126
MsaG042654 MtrunA17_Chr6g0470971 53.398 103 48 0 38 140 15 117 1.28e-32 126
MsaG042654 MtrunA17_Chr4g0030881 50.450 111 48 1 38 141 8 118 2.14e-32 125
MsaG042654 MtrunA17_Chr7g0247131 66.667 75 25 0 69 143 10 84 4.67e-32 124
MsaG042654 MtrunA17_Chr8g0360111 51.485 101 49 0 37 137 25 125 7.04e-31 120
MsaG042654 MtrunA17_Chr5g0434831 49.038 104 53 0 37 140 7 110 8.18e-31 118
MsaG042654 MtrunA17_Chr7g0240821 49.515 103 52 0 41 143 5 107 1.12e-30 119
MsaG042654 MtrunA17_Chr5g0434841 50.962 104 51 0 37 140 20 123 1.16e-30 122
MsaG042654 MtrunA17_Chr5g0434931 48.077 104 54 0 37 140 35 138 1.26e-30 120
MsaG042654 MtrunA17_Chr7g0220341 48.148 108 54 1 35 140 23 130 3.04e-30 119
MsaG042654 MtrunA17_Chr5g0434911 47.115 104 55 0 37 140 21 124 2.06e-29 117
MsaG042654 MtrunA17_Chr2g0294811 58.442 77 32 0 37 113 12 88 1.04e-28 110
MsaG042654 MtrunA17_Chr7g0228991 47.115 104 55 0 37 140 29 132 2.25e-28 114
MsaG042654 MtrunA17_Chr4g0042611 56.962 79 34 0 35 113 10 88 5.85e-28 107
MsaG042654 MtrunA17_Chr5g0401731 46.610 118 55 2 23 140 6 115 1.21e-27 113
MsaG042654 MtrunA17_Chr4g0008551 49.533 107 53 1 39 145 38 143 2.10e-27 113
MsaG042654 MtrunA17_Chr5g0429661 48.113 106 52 2 36 140 119 222 3.55e-27 112
MsaG042654 MtrunA17_Chr3g0133601 46.226 106 56 1 39 144 37 141 1.97e-26 107
MsaG042654 MtrunA17_Chr6g0454921 45.763 118 54 3 24 140 7 115 2.29e-26 106
MsaG042654 MtrunA17_Chr3g0117511 38.095 147 81 3 18 155 155 300 9.02e-26 110
MsaG042654 MtrunA17_Chr6g0453751 57.143 91 30 2 37 118 20 110 9.02e-26 102
MsaG042654 MtrunA17_Chr5g0395221 57.143 77 33 0 37 113 12 88 1.00e-25 100
MsaG042654 MtrunA17_Chr4g0053431 47.059 102 53 1 39 140 5 105 1.30e-25 106
MsaG042654 MtrunA17_Chr5g0437321 48.214 112 57 1 39 150 19 129 4.26e-25 105
MsaG042654 MtrunA17_Chr4g0058991 41.085 129 71 3 30 155 200 326 5.85e-25 107
MsaG042654 MtrunA17_Chr2g0323321 53.846 78 36 0 37 114 11 88 8.34e-25 99.4
MsaG042654 MtrunA17_Chr7g0238631 50.000 104 51 1 37 140 111 213 1.26e-24 107
MsaG042654 MtrunA17_Chr5g0425591 50.562 89 43 1 31 118 3 91 2.55e-24 97.1
MsaG042654 MtrunA17_Chr1g0157731 45.192 104 56 1 37 140 89 191 4.82e-24 107
MsaG042654 MtrunA17_Chr8g0342531 52.564 78 37 0 37 114 12 89 5.51e-24 98.6
MsaG042654 MtrunA17_Chr4g0042501 40.310 129 74 2 31 158 97 223 1.04e-23 103
MsaG042654 MtrunA17_Chr7g0228531 47.619 105 52 3 39 143 220 321 1.54e-23 103
MsaG042654 MtrunA17_Chr6g0480581 41.593 113 65 1 36 148 1 112 2.18e-23 99.4
MsaG042654 MtrunA17_Chr3g0139671 45.714 105 54 2 37 140 83 185 2.29e-23 104
MsaG042654 MtrunA17_Chr8g0342511 53.947 76 35 0 37 112 12 87 5.54e-23 93.6
MsaG042654 MtrunA17_Chr5g0417621 41.463 123 69 2 39 160 134 254 1.20e-22 100
MsaG042654 MtrunA17_Chr6g0460661 42.056 107 61 1 39 145 16 121 1.45e-22 94.7
MsaG042654 MtrunA17_Chr5g0434901 55.882 68 30 0 71 138 7 74 1.09e-21 90.5
MsaG042654 MtrunA17_Chr7g0254261 39.850 133 77 2 18 148 66 197 1.91e-21 95.9
MsaG042654 MtrunA17_Chr7g0229101 54.286 70 32 0 69 138 4 73 3.38e-21 92.0
MsaG042654 MtrunA17_Chr8g0342461 49.367 79 39 1 37 114 12 90 3.40e-21 90.1
MsaG042654 MtrunA17_Chr8g0342471 49.367 79 39 1 37 114 12 90 5.38e-21 89.4
MsaG042654 MtrunA17_Chr7g0228401 50.000 86 42 1 50 135 290 374 1.56e-20 94.7
MsaG042654 MtrunA17_Chr3g0125801 41.129 124 70 2 39 161 16 137 1.56e-20 92.0
MsaG042654 MtrunA17_Chr7g0229131 52.113 71 34 0 69 139 4 74 5.22e-20 87.4
MsaG042654 MtrunA17_Chr3g0093811 51.389 72 35 0 69 140 14 85 5.45e-20 90.1
MsaG042654 MtrunA17_Chr7g0238651 41.748 103 58 1 42 142 10 112 1.00e-19 90.9
MsaG042654 MtrunA17_Chr5g0397841 44.898 98 53 1 37 134 108 204 1.51e-19 91.7
MsaG042654 MtrunA17_Chr6g0460671 38.333 120 73 1 26 145 86 204 1.56e-19 90.1
MsaG042654 MtrunA17_Chr1g0177901 31.606 193 105 7 49 220 4 190 1.77e-19 87.0
MsaG042654 MtrunA17_Chr7g0228481 40.179 112 60 3 37 143 218 327 1.85e-19 90.9
MsaG042654 MtrunA17_Chr1g0193901 55.952 84 35 2 37 118 11 94 5.66e-18 79.7
MsaG042654 MtrunA17_Chr1g0193891 55.952 84 35 2 37 118 11 94 5.66e-18 79.7
MsaG042654 MtrunA17_Chr1g0193871 55.952 84 35 2 37 118 11 94 5.66e-18 79.7
MsaG042654 MtrunA17_Chr1g0193881 55.952 84 35 2 37 118 11 94 5.66e-18 79.7
MsaG042654 MtrunA17_Chr7g0233061 33.987 153 76 6 1 135 128 273 2.94e-17 83.6
MsaG042654 MtrunA17_Chr5g0416341 32.609 138 78 3 5 142 6 128 1.71e-16 82.0
MsaG042654 MtrunA17_Chr8g0362231 38.384 99 60 1 42 140 25 122 9.26e-16 79.7
MsaG042654 MtrunA17_Chr3g0104491 38.235 68 38 1 78 141 1 68 9.07e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG042654 AT3G11440.3 41.165 532 264 14 36 539 40 550 3.25e-107 332
MsaG042654 AT3G11440.4 41.165 532 264 14 36 539 40 550 3.25e-107 332
MsaG042654 AT3G11440.1 41.165 532 264 14 36 539 40 550 3.25e-107 332
MsaG042654 AT5G06100.5 39.925 531 260 15 34 545 29 519 1.99e-101 316
MsaG042654 AT5G06100.2 39.925 531 260 15 34 545 29 519 1.99e-101 316
MsaG042654 AT5G06100.3 39.925 531 260 15 34 545 29 519 1.99e-101 316
MsaG042654 AT5G06100.4 39.925 531 260 15 34 545 29 519 1.99e-101 316
MsaG042654 AT3G11440.2 47.439 371 172 8 36 385 40 408 1.77e-94 296
MsaG042654 AT5G06100.1 46.978 364 171 11 34 378 29 389 1.87e-87 277
MsaG042654 AT5G55020.1 79.167 120 25 0 34 153 23 142 1.15e-65 222
MsaG042654 AT2G32460.1 75.591 127 31 0 31 157 12 138 3.89e-64 218
MsaG042654 AT2G32460.2 78.512 121 26 0 37 157 6 126 4.89e-64 217
MsaG042654 AT4G26930.1 73.810 126 33 0 29 154 11 136 1.22e-62 211
MsaG042654 AT2G26960.1 38.719 359 159 12 37 365 20 347 3.70e-61 208
MsaG042654 AT3G61250.1 66.038 106 36 0 35 140 10 115 2.61e-46 164
MsaG042654 AT3G02940.2 66.346 104 35 0 37 140 12 115 8.60e-46 163
MsaG042654 AT3G02940.1 66.346 104 35 0 37 140 12 115 1.53e-45 163
MsaG042654 AT3G02940.3 66.346 104 35 0 37 140 12 115 1.53e-45 163
MsaG042654 AT5G16770.4 63.462 104 38 0 37 140 12 115 7.60e-44 159
MsaG042654 AT5G16770.3 63.462 104 38 0 37 140 12 115 7.60e-44 159
MsaG042654 AT5G65230.1 63.462 104 38 0 37 140 12 115 9.57e-44 158
MsaG042654 AT5G16770.1 63.462 104 38 0 37 140 12 115 1.28e-43 158
MsaG042654 AT5G16770.2 63.462 104 38 0 37 140 12 115 1.28e-43 158
MsaG042654 AT4G21440.1 63.462 104 38 0 37 140 12 115 3.22e-43 157
MsaG042654 AT3G01530.1 51.145 131 60 1 9 139 1 127 9.94e-43 152
MsaG042654 AT1G66230.1 60.377 106 42 0 37 142 12 117 1.96e-42 153
MsaG042654 AT3G13540.1 59.615 104 42 0 37 140 23 126 2.23e-42 152
MsaG042654 AT4G28110.1 58.182 110 45 1 37 145 12 121 3.62e-42 153
MsaG042654 AT1G22640.1 62.500 104 39 0 37 140 12 115 3.74e-42 152
MsaG042654 AT2G16720.1 63.462 104 38 0 37 140 12 115 5.72e-42 152
MsaG042654 AT4G38620.1 64.706 102 36 0 39 140 14 115 5.80e-42 152
MsaG042654 AT4G09460.1 63.725 102 37 0 39 140 14 115 7.56e-42 150
MsaG042654 AT1G35515.1 61.538 104 40 0 37 140 12 115 8.10e-42 149
MsaG042654 AT3G27810.1 59.223 103 42 0 37 139 20 122 1.04e-41 150
MsaG042654 AT5G10280.1 62.500 104 39 0 37 140 12 115 1.14e-41 153
MsaG042654 AT4G05100.1 61.538 104 40 0 37 140 13 116 1.21e-41 152
MsaG042654 AT3G23250.1 58.407 113 47 0 37 149 12 124 1.56e-41 151
MsaG042654 AT5G49330.1 59.434 106 43 0 35 140 10 115 2.14e-41 152
MsaG042654 AT2G31180.1 59.633 109 44 0 37 145 12 120 2.31e-41 149
MsaG042654 AT1G57560.2 45.509 167 87 2 37 199 12 178 2.56e-41 150
MsaG042654 AT5G40350.1 59.223 103 42 0 37 139 17 119 3.19e-41 148
MsaG042654 AT5G16600.1 61.321 106 41 0 37 142 12 117 6.72e-41 150
MsaG042654 AT5G54230.1 60.577 104 41 0 37 140 12 115 6.74e-41 150
MsaG042654 AT4G12350.1 59.434 106 43 0 35 140 10 115 8.08e-41 149
MsaG042654 AT1G34670.1 61.538 104 40 0 37 140 12 115 8.32e-41 151
MsaG042654 AT1G57560.1 47.436 156 73 3 37 185 12 165 1.02e-40 150
MsaG042654 AT5G61420.2 59.615 104 42 0 37 140 12 115 1.26e-40 151
MsaG042654 AT3G01140.2 60.577 104 41 0 37 140 12 115 1.27e-40 150
MsaG042654 AT1G08810.1 61.321 106 41 0 35 140 10 115 1.44e-40 148
MsaG042654 AT5G07690.1 60.194 103 41 0 37 139 12 114 1.59e-40 150
MsaG042654 AT5G15310.1 59.615 104 42 0 37 140 12 115 1.77e-40 149
MsaG042654 AT1G16490.1 58.654 104 43 0 37 140 14 117 1.90e-40 148
MsaG042654 AT1G06180.1 61.321 106 41 0 35 140 10 115 1.90e-40 147
MsaG042654 AT1G74650.1 60.377 106 42 0 35 140 10 115 1.97e-40 149
MsaG042654 AT5G14750.1 59.223 103 42 0 38 140 17 119 2.00e-40 145
MsaG042654 AT4G34990.1 62.745 102 38 0 39 140 14 115 2.08e-40 147
MsaG042654 AT1G68320.1 57.547 106 45 0 37 142 19 124 2.15e-40 148
MsaG042654 AT5G15310.2 59.615 104 42 0 37 140 12 115 2.22e-40 149
MsaG042654 AT4G22680.1 60.577 104 41 0 37 140 12 115 2.49e-40 147
MsaG042654 AT5G15310.4 59.615 104 42 0 37 140 12 115 2.61e-40 147
MsaG042654 AT3G01140.1 60.577 104 41 0 37 140 55 158 2.63e-40 150
MsaG042654 AT3G28910.1 61.538 104 40 0 37 140 12 115 2.83e-40 149
MsaG042654 AT5G07700.1 58.654 104 43 0 37 140 12 115 3.11e-40 149
MsaG042654 AT5G07700.2 58.654 104 43 0 37 140 12 115 3.11e-40 149
MsaG042654 AT1G79180.1 58.654 104 43 0 37 140 14 117 5.09e-40 147
MsaG042654 AT2G47460.1 58.491 106 44 0 35 140 10 115 5.31e-40 149
MsaG042654 AT4G17785.1 59.615 104 42 0 37 140 13 116 6.54e-40 149
MsaG042654 AT4G17785.2 59.615 104 42 0 37 140 13 116 6.95e-40 148
MsaG042654 AT1G25340.1 56.190 105 46 0 38 142 19 123 8.89e-40 146
MsaG042654 AT4G01680.3 60.377 106 42 0 37 142 12 117 1.03e-39 145
MsaG042654 AT1G18570.1 46.405 153 71 1 37 189 13 154 1.26e-39 148
MsaG042654 AT3G47600.1 59.434 106 43 0 35 140 10 115 1.40e-39 147
MsaG042654 AT3G13890.2 57.692 104 44 0 37 140 12 115 1.40e-39 148
MsaG042654 AT5G40330.1 56.075 107 47 0 38 144 13 119 2.08e-39 143
MsaG042654 AT5G26660.1 58.491 106 44 0 37 142 12 117 2.59e-39 147
MsaG042654 AT4G01680.1 60.377 106 42 0 37 142 12 117 2.64e-39 146
MsaG042654 AT4G13480.1 60.000 105 42 0 36 140 5 109 2.87e-39 144
MsaG042654 AT5G62470.2 59.434 106 43 0 35 140 10 115 3.77e-39 146
MsaG042654 AT5G14340.1 59.259 108 44 0 35 142 22 129 4.08e-39 144
MsaG042654 AT3G24310.1 58.491 106 44 0 38 143 19 124 8.91e-39 143
MsaG042654 AT3G27920.1 57.282 103 44 0 38 140 15 117 1.57e-38 141
MsaG042654 AT4G37780.1 55.140 107 47 1 35 140 10 116 2.50e-38 143
MsaG042654 AT5G12870.1 57.547 106 45 0 37 142 18 123 2.87e-38 142
MsaG042654 AT2G26950.1 48.252 143 74 0 23 165 2 144 2.90e-38 145
MsaG042654 AT3G12720.1 55.769 104 46 0 37 140 22 125 4.91e-38 142
MsaG042654 AT5G62320.1 57.658 111 40 1 37 140 13 123 5.39e-38 140
MsaG042654 AT1G09540.1 57.547 106 45 0 37 142 12 117 6.56e-38 143
MsaG042654 AT1G63910.1 50.388 129 61 1 37 162 12 140 6.64e-38 144
MsaG042654 AT3G08500.1 55.660 106 47 0 37 142 30 135 6.72e-38 143
MsaG042654 AT2G47190.1 48.462 130 62 1 13 142 1 125 7.80e-38 140
MsaG042654 AT5G62470.1 59.434 106 42 1 35 140 10 114 8.39e-38 143
MsaG042654 AT5G60890.1 57.547 106 45 0 37 142 12 117 9.05e-38 141
MsaG042654 AT1G56160.1 55.769 104 46 0 37 140 14 117 1.42e-37 140
MsaG042654 AT1G48000.1 53.333 105 49 0 35 139 30 134 1.83e-37 139
MsaG042654 AT3G12820.1 56.731 104 45 0 37 140 14 117 2.55e-37 138
MsaG042654 AT3G49690.1 57.143 105 44 1 37 140 12 116 3.87e-37 140
MsaG042654 AT3G30210.1 57.547 106 45 0 38 143 28 133 5.14e-37 139
MsaG042654 AT5G65790.1 56.190 105 45 1 37 140 12 116 8.73e-37 140
MsaG042654 AT3G13890.1 53.097 113 44 1 37 140 12 124 1.00e-36 140
MsaG042654 AT3G62610.1 54.717 106 48 0 35 140 10 115 1.04e-36 139
MsaG042654 AT3G60460.1 54.206 107 48 1 37 142 11 117 1.08e-36 138
MsaG042654 AT5G59780.3 57.282 103 44 0 38 140 9 111 1.20e-36 136
MsaG042654 AT5G35550.1 54.808 104 47 0 37 140 14 117 1.56e-36 137
MsaG042654 AT1G74080.1 58.252 103 43 0 37 139 12 114 2.42e-36 138
MsaG042654 AT3G46130.1 56.311 103 45 0 38 140 10 112 2.72e-36 136
MsaG042654 AT4G01680.2 54.237 118 42 1 37 142 12 129 4.81e-36 138
MsaG042654 AT1G25340.2 53.333 105 44 1 38 142 19 118 1.23e-35 135
MsaG042654 AT5G52600.1 52.885 104 49 0 37 140 12 115 1.27e-35 132
MsaG042654 AT5G56110.1 53.846 104 48 0 37 140 12 115 1.72e-35 135
MsaG042654 AT1G74430.1 54.808 104 47 0 37 140 12 115 2.22e-35 134
MsaG042654 AT1G25340.3 53.333 105 44 1 38 142 19 118 2.43e-35 135
MsaG042654 AT5G23000.1 54.286 105 47 1 37 140 12 116 3.00e-35 135
MsaG042654 AT2G36890.1 53.043 115 51 2 37 150 12 124 3.74e-35 134
MsaG042654 AT5G57620.1 55.238 105 46 1 37 140 12 116 5.77e-35 134
MsaG042654 AT2G36890.2 53.043 115 51 2 37 150 53 165 7.60e-35 134
MsaG042654 AT3G06490.1 58.252 103 43 0 37 139 19 121 1.53e-34 133
MsaG042654 AT1G79180.2 44.526 137 43 1 37 140 14 150 9.74e-34 131
MsaG042654 AT3G28470.1 54.545 99 45 0 37 135 12 110 1.56e-33 130
MsaG042654 AT5G49620.1 50.862 116 57 0 24 139 13 128 5.05e-33 128
MsaG042654 AT1G18710.1 51.923 104 50 0 37 140 12 115 7.76e-33 127
MsaG042654 AT3G48920.1 53.922 102 47 0 38 139 19 120 1.15e-32 126
MsaG042654 AT3G53200.1 51.402 107 52 0 37 143 9 115 1.77e-32 125
MsaG042654 AT1G66370.1 50.476 105 52 0 37 141 8 112 5.69e-32 124
MsaG042654 AT5G52260.1 49.565 115 58 0 38 152 13 127 5.06e-31 122
MsaG042654 AT4G25560.1 47.748 111 58 0 30 140 3 113 1.38e-30 121
MsaG042654 AT1G66380.1 50.476 105 52 0 37 141 8 112 2.06e-30 116
MsaG042654 AT5G26660.2 62.821 78 29 0 65 142 9 86 8.46e-30 120
MsaG042654 AT5G49620.2 45.385 130 57 1 24 139 13 142 1.42e-29 119
MsaG042654 AT3G27810.2 64.286 70 25 0 70 139 4 73 2.12e-28 112
MsaG042654 AT5G40360.1 47.170 106 55 1 36 141 155 259 5.85e-28 115
MsaG042654 AT3G09230.1 52.941 102 47 1 39 140 55 155 6.59e-28 115
MsaG042654 AT1G56650.1 49.524 105 53 0 37 141 8 112 8.71e-28 112
MsaG042654 AT5G40350.2 62.857 70 26 0 70 139 5 74 2.83e-27 108
MsaG042654 AT4G18770.1 46.281 121 61 3 37 154 215 334 5.33e-27 114
MsaG042654 AT1G66390.1 49.524 105 53 0 37 141 8 112 6.63e-27 109
MsaG042654 AT2G23290.1 51.961 102 48 1 39 140 13 113 8.21e-27 111
MsaG042654 AT3G12820.2 65.217 69 24 0 72 140 1 69 1.20e-26 107
MsaG042654 AT5G14750.3 60.870 69 27 0 72 140 17 85 2.66e-26 105
MsaG042654 AT4G37260.1 49.020 102 51 1 39 140 13 113 6.39e-26 108
MsaG042654 AT5G58850.1 47.619 105 52 2 37 140 103 205 6.57e-26 110
MsaG042654 AT3G46130.3 61.111 72 28 0 69 140 9 80 7.90e-26 106
MsaG042654 AT5G02320.1 50.000 104 51 1 37 140 125 227 8.73e-26 111
MsaG042654 AT5G02320.2 50.000 104 51 1 37 140 125 227 8.73e-26 111
MsaG042654 AT5G59780.2 60.274 73 29 0 68 140 18 90 9.11e-26 105
MsaG042654 AT3G46130.4 60.274 73 29 0 68 140 18 90 1.01e-25 106
MsaG042654 AT5G02320.3 50.000 104 51 1 37 140 65 167 1.14e-25 110
MsaG042654 AT5G35550.2 60.563 71 28 0 70 140 50 120 1.33e-25 106
MsaG042654 AT3G55730.1 49.038 104 50 2 39 141 56 157 1.78e-25 108
MsaG042654 AT5G67300.1 49.020 102 51 1 39 140 6 106 1.97e-25 107
MsaG042654 AT3G50060.1 45.872 109 58 1 39 147 6 113 2.46e-25 106
MsaG042654 AT3G47600.2 60.274 73 29 0 70 142 39 111 2.68e-25 107
MsaG042654 AT5G11050.1 47.115 104 52 2 39 141 105 206 3.89e-25 108
MsaG042654 AT2G39880.1 50.485 103 48 2 39 140 50 150 4.18e-25 107
MsaG042654 AT3G53200.2 57.895 76 32 0 68 143 7 82 8.58e-25 102
MsaG042654 AT3G27785.1 45.714 105 56 1 37 141 187 290 1.26e-24 107
MsaG042654 AT3G09370.2 48.077 104 53 1 37 140 133 235 2.31e-24 107
MsaG042654 AT3G09370.1 48.077 104 53 1 37 140 128 230 2.50e-24 107
MsaG042654 AT3G09370.3 48.077 104 53 1 37 140 141 243 3.25e-24 106
MsaG042654 AT5G11510.3 38.194 144 70 4 37 164 79 219 1.22e-23 106
MsaG042654 AT5G11510.1 38.194 144 70 4 37 164 79 219 1.22e-23 106
MsaG042654 AT5G11510.4 38.194 144 70 4 37 164 79 219 1.22e-23 106
MsaG042654 AT1G17950.1 43.966 116 62 2 35 149 1 114 1.22e-23 100
MsaG042654 AT4G33450.1 41.322 121 70 1 38 158 18 137 1.28e-23 100
MsaG042654 AT5G11510.2 38.194 144 70 4 37 164 79 219 1.46e-23 105
MsaG042654 AT5G11510.5 38.194 144 70 4 37 164 79 219 1.48e-23 105
MsaG042654 AT4G32730.5 43.269 104 58 1 37 140 85 187 7.61e-23 103
MsaG042654 AT4G32730.4 43.269 104 58 1 37 140 85 187 7.61e-23 103
MsaG042654 AT4G32730.3 43.269 104 58 1 37 140 85 187 7.61e-23 103
MsaG042654 AT4G32730.2 43.269 104 58 1 37 140 85 187 7.61e-23 103
MsaG042654 AT4G32730.1 43.269 104 58 1 37 140 85 187 8.30e-23 103
MsaG042654 AT1G18960.1 43.137 102 55 2 39 140 10 108 2.31e-22 98.2
MsaG042654 AT1G69560.2 44.860 107 56 2 37 142 121 225 2.49e-22 99.0
MsaG042654 AT1G69560.1 44.860 107 56 2 37 142 105 209 2.50e-22 98.6
MsaG042654 AT1G26780.1 45.370 108 56 2 36 142 95 200 2.55e-22 97.4
MsaG042654 AT1G26780.2 45.370 108 56 2 36 142 95 200 2.62e-22 99.0
MsaG042654 AT2G25230.1 45.192 104 54 2 37 139 24 125 1.45e-21 94.4
MsaG042654 AT5G17800.1 41.353 133 71 3 16 142 64 195 6.38e-21 94.4
MsaG042654 AT1G22640.3 68.421 57 18 0 84 140 2 58 7.60e-21 91.3
MsaG042654 AT1G66380.3 54.167 72 33 0 70 141 8 79 7.81e-21 88.2
MsaG042654 AT1G73410.1 44.954 109 57 2 35 142 2 108 1.35e-20 91.7
MsaG042654 AT4G00540.2 39.683 126 68 3 37 159 101 221 1.58e-20 94.4
MsaG042654 AT1G73410.2 44.954 109 57 2 35 142 2 108 2.40e-20 89.7
MsaG042654 AT4G00540.1 39.683 126 68 3 37 159 99 219 3.02e-20 94.0
MsaG042654 AT3G29020.2 42.308 104 59 1 39 142 67 169 6.60e-20 90.9
MsaG042654 AT3G29020.1 42.308 104 59 1 39 142 65 167 7.10e-20 89.4
MsaG042654 AT5G40430.1 36.154 130 76 4 14 139 26 152 1.76e-18 85.9
MsaG042654 AT3G23250.2 54.545 66 30 0 84 149 2 67 2.80e-18 84.7
MsaG042654 AT2G37630.1 38.835 103 61 1 42 142 7 109 1.50e-17 85.1
MsaG042654 AT5G14750.4 54.386 57 26 0 84 140 2 58 2.04e-17 79.7
MsaG042654 AT5G14750.2 54.386 57 26 0 84 140 2 58 2.04e-17 79.7
MsaG042654 AT1G71030.2 50.769 65 32 0 76 140 5 69 4.08e-17 80.1
MsaG042654 AT1G71030.1 50.769 65 32 0 76 140 19 83 5.56e-17 80.1
MsaG042654 AT1G66380.2 48.718 78 40 0 37 114 8 85 1.40e-16 76.3
MsaG042654 AT2G02820.2 34.653 101 65 1 42 142 33 132 6.83e-15 77.8
MsaG042654 AT2G02820.1 34.653 101 65 1 42 142 33 132 1.01e-14 77.0
MsaG042654 AT2G02820.3 34.653 101 65 1 42 142 33 132 1.89e-14 75.1
MsaG042654 AT1G14350.2 34.653 101 65 1 42 142 28 127 3.36e-14 75.5
MsaG042654 AT1G14350.1 34.653 101 65 1 42 142 28 127 3.36e-14 75.5
MsaG042654 AT5G39700.1 38.000 100 61 1 40 139 57 155 4.52e-14 71.2
MsaG042654 AT5G59780.1 58.696 46 19 0 95 140 1 46 1.55e-13 69.3
MsaG042654 AT3G46130.2 58.696 46 19 0 95 140 1 46 2.21e-13 69.3
MsaG042654 AT4G25560.2 56.522 46 20 0 95 140 2 47 2.42e-12 67.0

Find 147 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAAAATTGGGAAATAAA+TGG 0.160093 8:-25563977 MsaT042654.1:CDS
CTAAATCAGTTTCTGGATAT+TGG 0.161358 8:+25562788 None:intergenic
TCTTCTCAGTATTGTAGTTT+TGG 0.185561 8:-25563069 MsaT042654.1:CDS
CCACCAGTTCATACCGTTAA+TGG 0.187059 8:-25562412 MsaT042654.1:intron
CTGAACTCTTGACATAAAAT+TGG 0.205312 8:+25562599 None:intergenic
AATGTCCCTTTCTTTAAATT+TGG 0.223698 8:+25564035 None:intergenic
GCTTATAGCAATATGCTAAA+TGG 0.243066 8:-25563099 MsaT042654.1:CDS
CAGCTACCTAAATCAGTTTC+TGG 0.252802 8:+25562781 None:intergenic
ATCTGCTGAAGACGATATTT+TGG 0.260476 8:-25564168 MsaT042654.1:CDS
TTGTGAGCTTCATGCAAAAT+TGG 0.264653 8:-25563988 MsaT042654.1:CDS
TTATCCATTTGATCATATTC+AGG 0.276026 8:-25562962 MsaT042654.1:CDS
GATTGGTATGAGCAATGTTC+TGG 0.293988 8:-25561881 MsaT042654.1:CDS
TATGATGAGGCGGATGAAAA+AGG 0.311703 8:-25564297 MsaT042654.1:CDS
CAATATCCAGAAACTGATTT+AGG 0.324968 8:-25562787 MsaT042654.1:CDS
CCAAGTCAGGTAAGGGAGTT+TGG 0.325314 8:-25561758 MsaT042654.1:CDS
AGATTCAACAATTCCATTCC+TGG 0.327490 8:-25563013 MsaT042654.1:CDS
TGTTAATTCCATCGGTGCTT+TGG 0.351509 8:+25563247 None:intergenic
TCTGACTCCAGTGTACTAAT+TGG 0.355261 8:+25562697 None:intergenic
CTCCACTTCTATGCCTTTCG+AGG 0.370053 8:-25562824 MsaT042654.1:CDS
TAGAGTATGTTGACCCGGTT+TGG 0.375248 8:-25561973 MsaT042654.1:CDS
TGTGAGCTTCATGCAAAATT+GGG 0.387917 8:-25563987 MsaT042654.1:CDS
TTCTTTGGCTTGCAGTTACC+TGG 0.388817 8:-25563378 MsaT042654.1:intron
AGTCGGCCAGATTTCTTGCT+TGG 0.392519 8:-25561908 MsaT042654.1:CDS
TTGCTATAAGCAGAAATATC+AGG 0.394498 8:+25563111 None:intergenic
CCAAACTCCCTTACCTGACT+TGG 0.398941 8:+25561758 None:intergenic
ATAACGAGATAAAGAACTAT+TGG 0.400114 8:-25563347 MsaT042654.1:CDS
TGCAAAATTGGGAAATAAAT+GGG 0.400398 8:-25563976 MsaT042654.1:CDS
CATAGAAGATGGATTGGTTC+TGG 0.400612 8:+25561852 None:intergenic
ATGATTTGATTTCCACTGTC+AGG 0.402892 8:+25561947 None:intergenic
AGAGTCTGTTGCAATACTTC+AGG 0.410149 8:+25563276 None:intergenic
GATGTGCCAAATGGAGATAC+AGG 0.412162 8:+25562493 None:intergenic
GAACATGTATGAGACAGAAT+TGG 0.414325 8:-25562530 MsaT042654.1:CDS
TATAAGTGGACACAATCATT+TGG 0.415326 8:-25562928 MsaT042654.1:CDS
AGAAGAACGGAGAGGGGAAC+TGG 0.422920 8:-25564133 MsaT042654.1:CDS
TGCTCGACGATGATCGGATT+GGG 0.425007 8:-25564259 MsaT042654.1:CDS
GTATTGCAACAGACTCTTCA+TGG 0.426399 8:-25563270 MsaT042654.1:CDS
CCACTGTCAGGGGTCCAAAC+CGG 0.428288 8:+25561959 None:intergenic
ATTTCTTGCTTGGTTCAGAT+TGG 0.430484 8:-25561898 MsaT042654.1:CDS
CAGAAACTGATTTAGGTAGC+TGG 0.437233 8:-25562780 MsaT042654.1:CDS
CTTCTGTTGGCACTAGCAGC+AGG 0.439873 8:+25562451 None:intergenic
CTTAGGCCAAATTTAAAGAA+AGG 0.444819 8:-25564041 MsaT042654.1:CDS
CTCGGATCAAGAGGCGTCAC+CGG 0.447965 8:-25563320 MsaT042654.1:CDS
GCTGACCCTGTATCTCCATT+TGG 0.449100 8:-25562499 MsaT042654.1:CDS
TAAAAGGAACTAACCATTAA+CGG 0.449526 8:+25562399 None:intergenic
TGTTCTTCTCCACAGAATAG+TGG 0.452355 8:-25562673 MsaT042654.1:CDS
CTTTCTTTAAATTTGGCCTA+AGG 0.453919 8:+25564042 None:intergenic
GTTTCTGGATATTGGATTGA+AGG 0.458346 8:+25562796 None:intergenic
TTCAGTTGTATCGACAGAAA+TGG 0.461960 8:-25562988 MsaT042654.1:CDS
TCTGAACCAAGCAAGAAATC+TGG 0.462991 8:+25561902 None:intergenic
GTCTGTCAAGTATCTGATCT+TGG 0.466220 8:-25561707 MsaT042654.1:CDS
TCATCCTGAATATGATCAAA+TGG 0.469570 8:+25562958 None:intergenic
CACTGTCAGGGGTCCAAACC+GGG 0.469781 8:+25561960 None:intergenic
ATCAAGAGGCGTCACCGGGC+TGG 0.470049 8:-25563315 MsaT042654.1:CDS
AGGAGGGACCAGGATGATGA+AGG 0.471922 8:+25562893 None:intergenic
TTGAATCTCGAAAATGTTTG+TGG 0.472292 8:+25563028 None:intergenic
TAACCATTAACGGTATGAAC+TGG 0.477391 8:+25562409 None:intergenic
TTAGGCCAAATTTAAAGAAA+GGG 0.481231 8:-25564040 MsaT042654.1:CDS
GGGAGTTTGGTTCTTGTGCA+TGG 0.482890 8:-25561745 MsaT042654.1:CDS
CGATGTAGCATCATAGAAGA+TGG 0.485495 8:+25561841 None:intergenic
GTCAATTATGTCAAGAAGAA+CGG 0.485968 8:-25564146 MsaT042654.1:CDS
CTCATCCAGTGAACTTCTGT+TGG 0.486336 8:+25562438 None:intergenic
AACTATATACACATGACTGC+TGG 0.487097 8:-25561791 MsaT042654.1:CDS
CTTCTAACCCAAGTCAGGTA+AGG 0.489516 8:-25561766 MsaT042654.1:CDS
GTTGCCGCTGTTAATTCCAT+CGG 0.490339 8:+25563239 None:intergenic
ATGAGATGCTCGACGATGAT+CGG 0.492447 8:-25564265 MsaT042654.1:CDS
CATGGAATTCTTCTAAAGAA+AGG 0.493661 8:-25564200 MsaT042654.1:CDS
CAACATAAGGTAACATTCCC+TGG 0.494845 8:+25563142 None:intergenic
GAGCCGCCTGCTCTTTCACC+AGG 0.498504 8:+25562559 None:intergenic
TCAGGAAGCTCAGCAACATA+AGG 0.499412 8:+25563129 None:intergenic
AATATTGAAGATGTGCCAAA+TGG 0.499766 8:+25562484 None:intergenic
AGAAACTGATTTAGGTAGCT+GGG 0.502016 8:-25562779 MsaT042654.1:CDS
ATGGAATTCTTCTAAAGAAA+GGG 0.502809 8:-25564199 MsaT042654.1:CDS
ATTGGTATGAGCAATGTTCT+GGG 0.509168 8:-25561880 MsaT042654.1:CDS
AGCAGTCATGTGTATATAGT+TGG 0.511682 8:+25561793 None:intergenic
TGTCGATACAACTGAAATCC+AGG 0.512975 8:+25562995 None:intergenic
GGGAAATAAATGGGCACGCA+TGG 0.513252 8:-25563967 MsaT042654.1:CDS
CAATCACCCCTTCATCATCC+TGG 0.516518 8:-25562901 MsaT042654.1:CDS
GGAGGGACCAGGATGATGAA+GGG 0.520748 8:+25562894 None:intergenic
TCGGATCAAGAGGCGTCACC+GGG 0.526226 8:-25563319 MsaT042654.1:CDS
GAGCTGTGAGAGGAGGGACC+AGG 0.527604 8:+25562883 None:intergenic
ATGCTCGACGATGATCGGAT+TGG 0.527641 8:-25564260 MsaT042654.1:CDS
TGATTTGATTTCCACTGTCA+GGG 0.529873 8:+25561948 None:intergenic
CTTTCTTTAGAAGAATTCCA+TGG 0.531609 8:+25564201 None:intergenic
TGGAACTTCTAACCCAAGTC+AGG 0.531973 8:-25561771 MsaT042654.1:CDS
TAGCATCATAGAAGATGGAT+TGG 0.535010 8:+25561846 None:intergenic
GATAAAGTGGCAAGCCAGCC+CGG 0.536815 8:+25563301 None:intergenic
GATAAAGTACAGATTGTAGC+AGG 0.539787 8:+25562650 None:intergenic
TGCGGTGGGCTAATCACCTT+AGG 0.543941 8:-25564058 MsaT042654.1:CDS
CAAACTCCCTTACCTGACTT+GGG 0.545081 8:+25561759 None:intergenic
GACTCAAGTAAAGGAGGTGG+GGG 0.545216 8:+25562748 None:intergenic
TATGTCAAGAAGAACGGAGA+GGG 0.547178 8:-25564140 MsaT042654.1:CDS
TGACTGTATGAAGGATAACC+AGG 0.548074 8:-25563160 MsaT042654.1:CDS
TGGGTCAGAGTTTAATGATG+AGG 0.548932 8:-25564240 MsaT042654.1:CDS
AATGCTGTTCAGAAGCAGAC+AGG 0.553023 8:-25564110 MsaT042654.1:CDS
CTTCATGGCCAAAGCACCGA+TGG 0.554645 8:-25563255 MsaT042654.1:CDS
TCATCAACTGACTCAAGTAA+AGG 0.554711 8:+25562739 None:intergenic
AGGGACATTTACTGCAGAAG+AGG 0.563568 8:-25564021 MsaT042654.1:CDS
CACATTGAGCTGTGAGAGGA+GGG 0.567914 8:+25562877 None:intergenic
TTCTTCTAAAGAAAGGGCCA+TGG 0.568148 8:-25564193 MsaT042654.1:CDS
TGTCTCTGTCGAACTTTAGT+CGG 0.569086 8:-25561925 MsaT042654.1:CDS
TCCTACACCAATTAGTACAC+TGG 0.573683 8:-25562704 MsaT042654.1:CDS
TTTCTTTAGAAGAATTCCAT+GGG 0.577425 8:+25564202 None:intergenic
TGACTCAAGTAAAGGAGGTG+GGG 0.580735 8:+25562747 None:intergenic
TCAGATACTTGACAGACAGC+AGG 0.582056 8:+25561713 None:intergenic
GCAACTCCTGGTGAAAGAGC+AGG 0.583781 8:-25562565 MsaT042654.1:CDS
CTGACTCAAGTAAAGGAGGT+GGG 0.584625 8:+25562746 None:intergenic
TAGTGCCAACAGAAGTTCAC+TGG 0.586743 8:-25562443 MsaT042654.1:CDS
AATACTTCAGGAGGATAAAG+TGG 0.587179 8:+25563288 None:intergenic
CCATTAACGGTATGAACTGG+TGG 0.588065 8:+25562412 None:intergenic
TTCTAACCCAAGTCAGGTAA+GGG 0.592909 8:-25561765 MsaT042654.1:CDS
ACTGACTCAAGTAAAGGAGG+TGG 0.593168 8:+25562745 None:intergenic
CCCATATAATATATATGATG+AGG 0.594142 8:-25564310 None:intergenic
GATTCATCTACTGCAACTCC+TGG 0.596736 8:-25562577 MsaT042654.1:CDS
TGCAATATATGACTGTATGA+AGG 0.599886 8:-25563169 MsaT042654.1:CDS
ATCTCGTTATCTGTACGACC+AGG 0.601400 8:+25563360 None:intergenic
TAAAGAACTATTGGAACACT+CGG 0.601850 8:-25563338 MsaT042654.1:CDS
GAGGGACCAGGATGATGAAG+GGG 0.602166 8:+25562895 None:intergenic
CTCGAAAGGCATAGAAGTGG+AGG 0.606962 8:+25562825 None:intergenic
ATTGGAACACTCGGATCAAG+AGG 0.609258 8:-25563329 MsaT042654.1:CDS
GAGTATGACAGAAGTGCCCA+TGG 0.609546 8:-25564218 MsaT042654.1:CDS
TCGTCTTCAGCAGATGTCCA+TGG 0.609589 8:+25564176 None:intergenic
GATTTGATTTCCACTGTCAG+GGG 0.610068 8:+25561949 None:intergenic
ATACAACTGAAATCCAGGAA+TGG 0.613322 8:+25563000 None:intergenic
GTCTGTTGCAATACTTCAGG+AGG 0.614331 8:+25563279 None:intergenic
CTCCTCGAAAGGCATAGAAG+TGG 0.615574 8:+25562822 None:intergenic
ACACATTGAGCTGTGAGAGG+AGG 0.617974 8:+25562876 None:intergenic
TTCTGTTGGCACTAGCAGCA+GGG 0.625332 8:+25562452 None:intergenic
GAACTGCTTGGAGTCTTCCG+CGG 0.631803 8:+25562628 None:intergenic
ATTGAAGGAAGCTCCTCGAA+AGG 0.632798 8:+25562811 None:intergenic
ATATAATATATATGATGAGG+CGG 0.633939 8:-25564307 None:intergenic
GAAACTAGAGTATGTTGACC+CGG 0.637831 8:-25561978 MsaT042654.1:CDS
TCAACTGACTCAAGTAAAGG+AGG 0.638905 8:+25562742 None:intergenic
AGTCATGTGTATATAGTTGG+TGG 0.639073 8:+25561796 None:intergenic
TGTAGCAGGCCACTATTCTG+TGG 0.643678 8:+25562664 None:intergenic
CCGGTTTGGACCCCTGACAG+TGG 0.643685 8:-25561959 MsaT042654.1:CDS
GTAACACATTGAGCTGTGAG+AGG 0.644056 8:+25562873 None:intergenic
CAGACAGGCCTGCTACGTTG+CGG 0.646255 8:-25564095 MsaT042654.1:CDS
TACAATCTGTACTTTATCCG+CGG 0.647061 8:-25562645 MsaT042654.1:CDS
ATGTCAAGAAGAACGGAGAG+GGG 0.658303 8:-25564139 MsaT042654.1:CDS
TCCAGTGTACTAATTGGTGT+AGG 0.660576 8:+25562703 None:intergenic
GAAACTGATTTAGGTAGCTG+GGG 0.664267 8:-25562778 MsaT042654.1:CDS
GACTGTATGAAGGATAACCA+GGG 0.687260 8:-25563159 MsaT042654.1:CDS
ATGTGCCAAATGGAGATACA+GGG 0.688223 8:+25562494 None:intergenic
ACTCCTGGTGAAAGAGCAGG+CGG 0.694806 8:-25562562 MsaT042654.1:CDS
AGCACCGATGGAATTAACAG+CGG 0.704814 8:-25563243 MsaT042654.1:CDS
CATACTCTAGTTTCACAGTG+TGG 0.736230 8:+25561987 None:intergenic
TTATGTCAAGAAGAACGGAG+AGG 0.744167 8:-25564141 MsaT042654.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 25561703 25564318 25561703 ID=MsaG042654
Chr8 mRNA 25561703 25564318 25561703 ID=MsaT042654.1;Parent=MsaG042654
Chr8 exon 25561703 25562010 25561703 ID=MsaT042654.1.exon3;Parent=MsaT042654.1
Chr8 CDS 25561703 25562010 25561703 ID=cds.MsaT042654.1;Parent=MsaT042654.1
Chr8 exon 25562413 25563385 25562413 ID=MsaT042654.1.exon2;Parent=MsaT042654.1
Chr8 CDS 25562413 25563385 25562413 ID=cds.MsaT042654.1;Parent=MsaT042654.1
Chr8 exon 25563959 25564318 25563959 ID=MsaT042654.1.exon1;Parent=MsaT042654.1
Chr8 CDS 25563959 25564318 25563959 ID=cds.MsaT042654.1;Parent=MsaT042654.1
Gene Sequence

>MsaT042654.1

ATGATGAGGCGGATGAAAAAGGAGATTGAGGATGAGATGCTCGACGATGATCGGATTGGGTCAGAGTTTAATGATGAGGAGTATGACAGAAGTGCCCATGGAATTCTTCTAAAGAAAGGGCCATGGACATCTGCTGAAGACGATATTTTGGTCAATTATGTCAAGAAGAACGGAGAGGGGAACTGGAATGCTGTTCAGAAGCAGACAGGCCTGCTACGTTGCGGAAAAAGTTGTCGATTGCGGTGGGCTAATCACCTTAGGCCAAATTTAAAGAAAGGGACATTTACTGCAGAAGAGGAGCAGTTGATTTGTGAGCTTCATGCAAAATTGGGAAATAAATGGGCACGCATGGCAGCACATTTACCTGGTCGTACAGATAACGAGATAAAGAACTATTGGAACACTCGGATCAAGAGGCGTCACCGGGCTGGCTTGCCACTTTATCCTCCTGAAGTATTGCAACAGACTCTTCATGGCCAAAGCACCGATGGAATTAACAGCGGCAACAAAGTGCATCCTGATTTCTTGCAGAAAAAGAATTTTGATATACATGATGCAATATATGACTGTATGAAGGATAACCAGGGAATGTTACCTTATGTTGCTGAGCTTCCTGATATTTCTGCTTATAGCAATATGCTAAATGGTTTTGATTCTTCTCAGTATTGTAGTTTTGGGCAATCAACATCATCTAACCACAAACATTTTCGAGATTCAACAATTCCATTCCTGGATTTCAGTTGTATCGACAGAAATGGTTATTATCCATTTGATCATATTCAGGATGATACTTTTTATAAGTGGACACAATCATTTGGCATGCAATCACCCCTTCATCATCCTGGTCCCTCCTCTCACAGCTCAATGTGTTACAGCCATTCACTAAAAAATGGAAATTCCTCCACTTCTATGCCTTTCGAGGAGCTTCCTTCAATCCAATATCCAGAAACTGATTTAGGTAGCTGGGGCACATCTCCCCCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTAAGTCTCCTACACCAATTAGTACACTGGAGTCAGATTGTTCTTCTCCACAGAATAGTGGCCTGCTACAATCTGTACTTTATCCGCGGAAGACTCCAAGCAGTTCAAAAAACCAATTTTATGTCAAGAGTTCAGATTCATCTACTGCAACTCCTGGTGAAAGAGCAGGCGGCTCTGCTTTGAACATGTATGAGACAGAATTGGAAGAATGTGCTGACCCTGTATCTCCATTTGGCACATCTTCAATATTGAACGAGTGCCCTGCTGCTAGTGCCAACAGAAGTTCACTGGATGAGCAGCCACCAGTTCATACCGTTAATGGCCACACTGTGAAACTAGAGTATGTTGACCCGGTTTGGACCCCTGACAGTGGAAATCAAATCATGTCTCTGTCGAACTTTAGTCGGCCAGATTTCTTGCTTGGTTCAGATTGGTATGAGCAATGTTCTGGGAATGACCAGAACCAATCCATCTTCTATGATGCTACATCGATGTTTCTTGAAGATCAATCAGCCACCAACTATATACACATGACTGCTGGAACTTCTAACCCAAGTCAGGTAAGGGAGTTTGGTTCTTGTGCATGGAACAACATGCCTGCTGTCTGTCAAGTATCTGATCTTGGTTAA
Protein sequence

>MsaT042654.1

MMRRMKKEIEDEMLDDDRIGSEFNDEEYDRSAHGILLKKGPWTSAEDDILVNYVKKNGEGNWNAVQKQTGLLRCGKSCRLRWANHLRPNLKKGTFTAEEEQLICELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRHRAGLPLYPPEVLQQTLHGQSTDGINSGNKVHPDFLQKKNFDIHDAIYDCMKDNQGMLPYVAELPDISAYSNMLNGFDSSQYCSFGQSTSSNHKHFRDSTIPFLDFSCIDRNGYYPFDHIQDDTFYKWTQSFGMQSPLHHPGPSSHSSMCYSHSLKNGNSSTSMPFEELPSIQYPETDLGSWGTSPPPPLLESVDDFIKSPTPISTLESDCSSPQNSGLLQSVLYPRKTPSSSKNQFYVKSSDSSTATPGERAGGSALNMYETELEECADPVSPFGTSSILNECPAASANRSSLDEQPPVHTVNGHTVKLEYVDPVWTPDSGNQIMSLSNFSRPDFLLGSDWYEQCSGNDQNQSIFYDATSMFLEDQSATNYIHMTAGTSNPSQVREFGSCAWNNMPAVCQVSDLG*