AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG043304

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG043304 MtrunA17_Chr8g0362231 93.612 407 25 1 1 407 1 406 0.0 788
MsaG043304 MtrunA17_Chr5g0416341 54.241 448 155 15 1 410 6 441 1.19e-142 420
MsaG043304 MtrunA17_Chr7g0238631 47.959 98 50 1 25 121 116 213 3.25e-24 106
MsaG043304 MtrunA17_Chr1g0157731 40.816 98 58 0 25 122 94 191 1.27e-22 102
MsaG043304 MtrunA17_Chr3g0139671 39.796 98 59 0 25 122 88 185 5.53e-22 100
MsaG043304 MtrunA17_Chr4g0058991 39.316 117 70 1 25 140 212 328 9.53e-21 95.5
MsaG043304 MtrunA17_Chr1g0209661 38.686 137 80 3 1 135 10 144 1.24e-20 92.8
MsaG043304 MtrunA17_Chr5g0397841 41.304 92 54 0 24 115 112 203 3.59e-20 93.6
MsaG043304 MtrunA17_Chr5g0401731 39.048 105 63 1 25 128 18 122 3.60e-20 92.0
MsaG043304 MtrunA17_Chr7g0228231 42.202 109 62 1 25 132 19 127 4.30e-20 89.0
MsaG043304 MtrunA17_Chr3g0117511 38.776 98 60 0 25 122 186 283 9.73e-20 92.0
MsaG043304 MtrunA17_Chr4g0053431 32.000 125 79 1 25 149 8 126 2.27e-19 88.6
MsaG043304 MtrunA17_Chr5g0429661 38.776 98 60 0 25 122 125 222 2.60e-19 89.7
MsaG043304 MtrunA17_Chr4g0008551 35.577 104 67 0 25 128 41 144 4.77e-19 89.0
MsaG043304 MtrunA17_Chr6g0450101 42.574 101 57 1 25 124 19 119 5.53e-19 85.9
MsaG043304 MtrunA17_Chr2g0330041 28.947 228 141 5 10 224 2 221 5.87e-19 89.4
MsaG043304 MtrunA17_Chr3g0103281 32.222 180 111 4 25 202 17 187 7.35e-19 87.8
MsaG043304 MtrunA17_Chr7g0228531 36.364 121 74 2 4 122 200 319 7.74e-19 89.4
MsaG043304 MtrunA17_Chr7g0228401 32.374 139 92 1 33 169 290 428 8.01e-19 89.7
MsaG043304 MtrunA17_Chr7g0228481 41.667 96 55 1 25 120 223 317 1.06e-18 89.0
MsaG043304 MtrunA17_Chr5g0417621 32.090 134 88 1 7 140 122 252 1.90e-18 88.2
MsaG043304 MtrunA17_Chr5g0410961 37.815 119 70 3 25 141 17 133 3.77e-18 86.3
MsaG043304 MtrunA17_Chr1g0167661 37.705 122 65 3 25 138 17 135 4.71e-18 84.3
MsaG043304 MtrunA17_Chr3g0135311 44.000 100 54 2 25 122 17 116 6.46e-18 85.5
MsaG043304 MtrunA17_Chr2g0309911 40.000 100 57 2 25 122 16 114 8.11e-18 84.7
MsaG043304 MtrunA17_Chr1g0168661 39.091 110 64 2 25 132 26 134 1.04e-17 83.2
MsaG043304 MtrunA17_Chr6g0460661 29.565 115 80 1 25 138 19 133 1.21e-17 80.5
MsaG043304 MtrunA17_Chr4g0042501 31.034 116 80 0 25 140 108 223 1.54e-17 85.1
MsaG043304 MtrunA17_Chr6g0454921 36.735 98 61 1 25 121 18 115 1.66e-17 81.6
MsaG043304 MtrunA17_Chr7g0217221 36.207 116 73 1 25 139 17 132 1.74e-17 82.8
MsaG043304 MtrunA17_Chr1g0194291 35.971 139 83 3 1 135 4 140 2.03e-17 82.4
MsaG043304 MtrunA17_Chr7g0254411 32.847 137 90 2 25 160 17 152 3.34e-17 83.2
MsaG043304 MtrunA17_Chr3g0133601 39.000 100 60 1 25 123 40 139 3.37e-17 80.9
MsaG043304 MtrunA17_Chr4g0022901 41.284 109 61 2 24 130 17 124 4.04e-17 81.6
MsaG043304 MtrunA17_Chr4g0044421 40.000 110 64 2 24 131 16 125 4.62e-17 79.7
MsaG043304 MtrunA17_Chr4g0013361 38.835 103 61 2 25 125 15 117 5.00e-17 82.0
MsaG043304 MtrunA17_Chr8g0343831 37.895 95 58 1 24 117 12 106 6.51e-17 80.9
MsaG043304 MtrunA17_Chr4g0055981 37.383 107 66 1 12 117 47 153 6.55e-17 80.5
MsaG043304 MtrunA17_Chr1g0177901 37.864 103 62 1 32 134 4 104 7.35e-17 79.7
MsaG043304 MtrunA17_Chr1g0193371 35.088 114 72 2 25 136 17 130 9.74e-17 82.0
MsaG043304 MtrunA17_Chr4g0022911 40.367 109 62 2 24 130 17 124 1.05e-16 80.9
MsaG043304 MtrunA17_Chr2g0327821 39.216 102 61 1 25 125 11 112 1.16e-16 79.7
MsaG043304 MtrunA17_Chr4g0022931 38.281 128 64 3 24 137 17 143 1.26e-16 80.5
MsaG043304 MtrunA17_Chr1g0194301 38.261 115 65 3 25 134 38 151 1.36e-16 80.5
MsaG043304 MtrunA17_Chr6g0480581 36.538 104 62 1 25 124 7 110 1.39e-16 79.7
MsaG043304 MtrunA17_Chr1g0186061 37.719 114 70 1 25 137 25 138 1.62e-16 79.7
MsaG043304 MtrunA17_Chr7g0275911 35.897 117 74 1 10 125 2 118 1.62e-16 79.7
MsaG043304 MtrunA17_Chr3g0121241 37.838 111 67 2 25 133 47 157 2.78e-16 79.7
MsaG043304 MtrunA17_Chr1g0152011 40.000 100 58 2 25 122 17 116 2.86e-16 80.5
MsaG043304 MtrunA17_Chr3g0099131 35.577 104 66 1 25 127 46 149 3.08e-16 81.6
MsaG043304 MtrunA17_Chr8g0354661 27.434 226 146 6 1 216 14 231 3.14e-16 81.6
MsaG043304 MtrunA17_Chr4g0060721 32.099 162 97 4 25 185 18 167 3.26e-16 80.1
MsaG043304 MtrunA17_Chr5g0437321 32.979 94 63 0 24 117 21 114 3.55e-16 79.3
MsaG043304 MtrunA17_Chr8g0334881 38.235 102 61 2 25 124 15 116 3.67e-16 79.7
MsaG043304 MtrunA17_Chr8g0387421 37.374 99 61 1 25 122 17 115 3.88e-16 79.7
MsaG043304 MtrunA17_Chr3g0125801 38.000 100 60 1 25 122 19 118 4.27e-16 79.3
MsaG043304 MtrunA17_Chr6g0452271 38.596 114 68 2 25 136 17 130 4.34e-16 79.7
MsaG043304 MtrunA17_Chr7g0264641 42.000 100 56 2 25 122 17 116 4.50e-16 78.6
MsaG043304 MtrunA17_Chr8g0342541 35.833 120 75 2 10 127 2 121 4.55e-16 79.7
MsaG043304 MtrunA17_Chr3g0080861 38.384 99 60 1 25 122 42 140 5.93e-16 80.9
MsaG043304 MtrunA17_Chr1g0203411 36.283 113 68 2 19 127 8 120 6.45e-16 78.6
MsaG043304 MtrunA17_Chr4g0030881 39.450 109 57 3 25 124 12 120 8.00e-16 77.8
MsaG043304 MtrunA17_Chr1g0167691 39.394 99 59 1 25 122 17 115 8.84e-16 77.4
MsaG043304 MtrunA17_Chr7g0233061 38.261 115 62 3 25 136 183 291 9.82e-16 79.0
MsaG043304 MtrunA17_Chr1g0203441 31.707 123 83 1 16 137 9 131 1.01e-15 77.8
MsaG043304 MtrunA17_Chr7g0254261 35.714 98 63 0 25 122 92 189 1.13e-15 79.0
MsaG043304 MtrunA17_Chr1g0151941 39.000 100 59 2 25 122 17 116 1.43e-15 77.0
MsaG043304 MtrunA17_Chr4g0037141 36.937 111 68 2 25 133 17 127 1.59e-15 77.4
MsaG043304 MtrunA17_Chr7g0270891 34.211 114 73 2 25 136 17 130 1.63e-15 78.6
MsaG043304 MtrunA17_Chr4g0070641 37.895 95 58 1 24 117 16 110 1.86e-15 74.3
MsaG043304 MtrunA17_Chr7g0261281 32.716 162 100 5 25 180 17 175 1.89e-15 77.0
MsaG043304 MtrunA17_Chr3g0088461 37.624 101 62 1 25 124 27 127 2.13e-15 77.8
MsaG043304 MtrunA17_Chr1g0193801 35.354 99 63 1 25 122 17 115 2.29e-15 78.2
MsaG043304 MtrunA17_Chr8g0349261 40.777 103 53 4 25 122 18 117 2.72e-15 77.0
MsaG043304 MtrunA17_Chr4g0048511 37.374 99 61 1 25 122 18 116 3.10e-15 77.4
MsaG043304 MtrunA17_Chr3g0092401 37.069 116 64 3 25 131 18 133 3.10e-15 77.0
MsaG043304 MtrunA17_Chr4g0032401 36.275 102 64 1 25 125 22 123 3.32e-15 77.0
MsaG043304 MtrunA17_Chr5g0400821 38.053 113 66 3 25 133 17 129 3.44e-15 76.6
MsaG043304 MtrunA17_Chr6g0460671 31.250 128 86 2 25 150 102 229 3.46e-15 77.4
MsaG043304 MtrunA17_Chr6g0470971 31.707 123 83 1 25 146 19 141 3.47e-15 76.3
MsaG043304 MtrunA17_Chr4g0068061 39.394 99 58 2 25 121 17 115 3.69e-15 77.0
MsaG043304 MtrunA17_Chr5g0435101 36.607 112 69 2 24 133 15 126 3.87e-15 74.7
MsaG043304 MtrunA17_Chr6g0487491 38.889 108 56 3 25 122 17 124 4.02e-15 75.9
MsaG043304 MtrunA17_Chr4g0028311 40.000 100 58 2 25 122 17 116 4.18e-15 76.6
MsaG043304 MtrunA17_Chr1g0187761 34.351 131 78 4 25 148 17 146 4.41e-15 75.5
MsaG043304 MtrunA17_Chr7g0228991 34.146 123 79 2 1 121 10 132 4.56e-15 75.9
MsaG043304 MtrunA17_Chr2g0323411 35.849 106 66 2 25 128 17 122 5.08e-15 76.6
MsaG043304 MtrunA17_Chr1g0211161 35.345 116 73 2 15 128 8 123 7.09e-15 74.3
MsaG043304 MtrunA17_Chr4g0070611 37.255 102 63 1 25 125 17 118 8.09e-15 75.5
MsaG043304 MtrunA17_Chr5g0397231 36.170 94 59 1 25 117 17 110 9.64e-15 75.9
MsaG043304 MtrunA17_Chr5g0395281 34.513 113 69 2 11 122 7 115 1.02e-14 75.1
MsaG043304 MtrunA17_Chr2g0328771 35.294 102 65 1 25 125 25 126 1.11e-14 75.5
MsaG043304 MtrunA17_Chr4g0072751 41.053 95 54 2 25 117 17 111 1.44e-14 75.5
MsaG043304 MtrunA17_Chr3g0115821 36.364 99 62 1 25 122 17 115 1.45e-14 75.5
MsaG043304 MtrunA17_Chr1g0154031 33.654 104 68 1 25 127 81 184 1.55e-14 75.9
MsaG043304 MtrunA17_Chr6g0453211 38.298 94 57 1 25 117 17 110 1.59e-14 74.7
MsaG043304 MtrunA17_Chr8g0342481 33.913 115 74 1 10 122 2 116 1.60e-14 75.9
MsaG043304 MtrunA17_Chr2g0281071 37.374 99 61 1 25 122 18 116 1.67e-14 75.1
MsaG043304 MtrunA17_Chr8g0346561 37.383 107 65 2 21 125 13 119 1.80e-14 74.3
MsaG043304 MtrunA17_Chr8g0342521 34.211 114 73 2 10 121 2 115 2.11e-14 74.7
MsaG043304 MtrunA17_Chr4g0058631 33.333 114 74 2 25 136 17 130 2.14e-14 75.1
MsaG043304 MtrunA17_Chr3g0131121 30.000 140 94 3 25 160 17 156 2.24e-14 73.9
MsaG043304 MtrunA17_Chr4g0039971 35.135 111 70 2 25 133 18 128 2.32e-14 74.7
MsaG043304 MtrunA17_Chr5g0441131 38.318 107 53 4 25 124 14 114 2.39e-14 71.6
MsaG043304 MtrunA17_Chr2g0327351 40.000 95 55 2 25 117 17 111 3.00e-14 73.9
MsaG043304 MtrunA17_Chr7g0240821 33.051 118 77 2 23 139 4 120 4.08e-14 72.0
MsaG043304 MtrunA17_Chr1g0180391 37.000 100 62 1 24 122 23 122 4.10e-14 72.0
MsaG043304 MtrunA17_Chr7g0274581 35.238 105 66 2 25 127 17 121 4.26e-14 71.6
MsaG043304 MtrunA17_Chr5g0434931 38.000 100 60 2 24 121 39 138 4.81e-14 72.8
MsaG043304 MtrunA17_Chr2g0293911 38.760 129 70 3 25 151 29 150 5.51e-14 73.2
MsaG043304 MtrunA17_Chr3g0117091 33.884 121 78 2 10 128 2 122 5.57e-14 73.6
MsaG043304 MtrunA17_Chr6g0453471 36.364 99 62 1 25 122 17 115 7.51e-14 73.2
MsaG043304 MtrunA17_Chr8g0360111 35.789 95 60 1 24 117 29 123 7.90e-14 72.0
MsaG043304 MtrunA17_Chr7g0217741 36.364 99 62 1 25 122 17 115 8.28e-14 72.4
MsaG043304 MtrunA17_Chr4g0022881 35.294 102 65 1 24 124 16 117 8.41e-14 71.2
MsaG043304 MtrunA17_Chr5g0434831 37.000 100 61 2 24 121 11 110 1.08e-13 70.1
MsaG043304 MtrunA17_Chr7g0220341 36.082 97 59 1 24 117 29 125 1.13e-13 71.6
MsaG043304 MtrunA17_Chr4g0054391 39.362 94 55 2 25 116 17 110 1.23e-13 71.6
MsaG043304 MtrunA17_Chr2g0323351 37.168 113 65 4 24 133 16 125 1.35e-13 70.9
MsaG043304 MtrunA17_Chr8g0385321 31.405 121 81 2 10 128 2 122 1.97e-13 71.6
MsaG043304 MtrunA17_Chr5g0440761 33.010 103 67 2 24 124 16 118 2.94e-13 70.1
MsaG043304 MtrunA17_Chr7g0274481 35.789 95 60 1 24 118 9 102 3.15e-13 72.8
MsaG043304 MtrunA17_Chr5g0441141 33.010 103 67 2 24 124 16 118 3.40e-13 70.1
MsaG043304 MtrunA17_Chr5g0417821 33.333 99 65 1 25 122 12 110 3.63e-13 70.5
MsaG043304 MtrunA17_Chr5g0434911 34.746 118 74 3 6 121 8 124 3.77e-13 70.1
MsaG043304 MtrunA17_Chr7g0247131 45.588 68 37 0 58 125 17 84 3.90e-13 70.1
MsaG043304 MtrunA17_Chr5g0440781 33.000 100 65 2 24 121 16 115 3.94e-13 68.2
MsaG043304 MtrunA17_Chr4g0068921 40.000 110 64 2 25 132 29 138 5.52e-13 67.8
MsaG043304 MtrunA17_Chr7g0271241 35.556 90 57 1 25 113 17 106 1.17e-12 69.7
MsaG043304 MtrunA17_Chr7g0228891 38.235 102 60 2 25 124 17 117 1.84e-12 68.2
MsaG043304 MtrunA17_Chr4g0022891 33.333 114 70 3 25 136 17 126 1.87e-12 67.4
MsaG043304 MtrunA17_Chr5g0434841 36.364 99 61 2 25 121 25 123 1.93e-12 68.6
MsaG043304 MtrunA17_Chr4g0042671 35.354 99 63 1 25 122 17 115 2.73e-12 68.9
MsaG043304 MtrunA17_Chr6g0483051 27.624 181 107 4 25 182 72 251 7.05e-12 68.2
MsaG043304 MtrunA17_Chr2g0322521 36.364 99 62 1 25 122 34 132 7.47e-12 67.4
MsaG043304 MtrunA17_Chr1g0192411 32.353 102 68 1 24 124 16 117 1.02e-11 67.0
MsaG043304 MtrunA17_Chr1g0194951 34.043 94 61 1 25 117 17 110 1.50e-11 66.2
MsaG043304 MtrunA17_Chr2g0311221 34.043 94 61 1 25 117 19 112 1.77e-11 65.9
MsaG043304 MtrunA17_Chr4g0057031 36.792 106 65 2 25 128 17 122 3.61e-11 63.9
MsaG043304 MtrunA17_Chr3g0099141 33.750 80 52 1 25 103 45 124 4.25e-11 61.2
MsaG043304 MtrunA17_Chr5g0434571 32.456 114 75 2 25 136 53 166 7.05e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG043304 AT1G14350.2 43.662 426 181 16 13 410 16 410 5.64e-96 300
MsaG043304 AT1G14350.1 43.662 426 181 16 13 410 16 410 5.64e-96 300
MsaG043304 AT2G02820.1 43.807 436 191 15 13 401 21 449 2.63e-92 291
MsaG043304 AT2G02820.2 43.018 444 201 14 13 410 21 458 9.27e-92 290
MsaG043304 AT2G02820.3 46.326 313 131 8 13 289 21 332 1.21e-79 254
MsaG043304 AT1G14350.3 38.564 376 172 16 63 410 23 367 6.79e-64 214
MsaG043304 AT1G14350.4 38.564 376 172 16 63 410 23 367 6.79e-64 214
MsaG043304 AT5G40360.1 41.463 123 61 2 25 140 161 279 5.70e-24 103
MsaG043304 AT3G27785.1 38.760 129 65 2 25 139 192 320 5.84e-24 105
MsaG043304 AT5G02320.1 44.898 98 53 1 25 121 130 227 1.05e-22 102
MsaG043304 AT5G02320.2 44.898 98 53 1 25 121 130 227 1.05e-22 102
MsaG043304 AT5G02320.3 44.898 98 53 1 25 121 70 167 1.18e-22 101
MsaG043304 AT3G09370.2 43.878 98 54 1 25 121 138 235 1.49e-21 98.6
MsaG043304 AT5G11510.5 40.816 98 58 0 25 122 84 181 1.50e-21 99.4
MsaG043304 AT5G11510.3 40.816 98 58 0 25 122 84 181 1.53e-21 99.8
MsaG043304 AT5G11510.1 40.816 98 58 0 25 122 84 181 1.53e-21 99.8
MsaG043304 AT5G11510.4 40.816 98 58 0 25 122 84 181 1.53e-21 99.8
MsaG043304 AT5G11510.2 40.816 98 58 0 25 122 84 181 1.53e-21 99.8
MsaG043304 AT3G09370.1 43.878 98 54 1 25 121 133 230 1.66e-21 98.6
MsaG043304 AT3G09370.3 43.878 98 54 1 25 121 146 243 2.20e-21 98.2
MsaG043304 AT2G25230.1 40.404 99 59 0 23 121 27 125 2.97e-21 93.6
MsaG043304 AT5G58850.1 36.154 130 75 2 25 154 108 229 6.25e-21 95.9
MsaG043304 AT4G18770.1 36.496 137 82 2 25 156 220 356 7.31e-21 95.9
MsaG043304 AT5G11050.1 40.000 115 60 2 25 131 108 221 1.03e-20 95.1
MsaG043304 AT3G27920.1 44.954 109 59 1 25 132 19 127 6.05e-20 89.4
MsaG043304 AT1G25340.1 38.346 133 77 3 5 135 6 135 8.17e-20 90.5
MsaG043304 AT4G33450.1 39.252 107 65 0 25 131 22 128 9.84e-20 89.4
MsaG043304 AT4G32730.1 35.714 98 63 0 25 122 90 187 1.06e-19 93.6
MsaG043304 AT1G25340.2 37.879 132 74 3 5 135 6 130 1.08e-19 89.7
MsaG043304 AT5G14750.1 44.444 117 62 3 25 138 21 137 1.10e-19 88.2
MsaG043304 AT4G32730.5 35.714 98 63 0 25 122 90 187 1.13e-19 94.0
MsaG043304 AT4G32730.4 35.714 98 63 0 25 122 90 187 1.13e-19 94.0
MsaG043304 AT4G32730.3 35.714 98 63 0 25 122 90 187 1.13e-19 94.0
MsaG043304 AT4G32730.2 35.714 98 63 0 25 122 90 187 1.13e-19 94.0
MsaG043304 AT1G25340.3 37.879 132 74 3 5 135 6 130 2.15e-19 89.7
MsaG043304 AT1G09540.1 37.719 114 69 2 25 136 17 130 3.19e-19 90.1
MsaG043304 AT5G40330.1 46.154 104 54 2 25 126 17 120 3.27e-19 87.0
MsaG043304 AT3G09230.1 35.433 127 79 1 17 143 50 173 5.80e-19 89.7
MsaG043304 AT3G50060.1 39.796 98 58 1 25 121 9 106 8.43e-19 87.8
MsaG043304 AT2G23290.1 39.091 110 64 2 15 121 4 113 9.21e-19 87.8
MsaG043304 AT3G27810.1 40.367 109 63 2 25 131 25 133 1.52e-18 85.5
MsaG043304 AT3G30210.1 39.216 102 61 1 25 125 32 133 1.57e-18 86.3
MsaG043304 AT5G40350.1 32.484 157 96 3 25 171 22 178 1.79e-18 84.7
MsaG043304 AT1G17950.1 38.000 100 62 0 25 124 8 107 4.11e-18 84.7
MsaG043304 AT1G08810.1 38.843 121 71 3 25 142 17 137 4.77e-18 85.1
MsaG043304 AT5G67300.1 34.058 138 77 3 25 161 9 133 5.69e-18 85.5
MsaG043304 AT3G29020.1 34.307 137 89 1 25 160 68 204 7.95e-18 83.6
MsaG043304 AT4G37780.1 41.000 100 57 2 25 122 17 116 8.50e-18 84.7
MsaG043304 AT5G52600.1 42.553 94 53 1 25 117 17 110 1.06e-17 82.4
MsaG043304 AT1G69560.2 29.545 132 90 1 2 133 106 234 1.11e-17 85.1
MsaG043304 AT1G69560.1 29.545 132 90 1 2 133 90 218 1.41e-17 84.7
MsaG043304 AT1G22640.1 33.813 139 85 3 24 160 16 149 2.05e-17 82.8
MsaG043304 AT3G29020.2 35.833 120 76 1 25 143 70 189 2.96e-17 83.2
MsaG043304 AT2G47190.1 27.830 212 124 6 25 227 25 216 3.10e-17 82.4
MsaG043304 AT3G13540.1 32.237 152 96 4 25 171 28 177 3.63e-17 82.0
MsaG043304 AT4G00540.2 38.835 103 58 2 24 122 105 206 3.87e-17 84.3
MsaG043304 AT5G62470.1 37.190 121 69 1 25 138 17 137 3.88e-17 83.6
MsaG043304 AT3G55730.1 38.776 98 59 1 25 121 59 156 4.82e-17 84.0
MsaG043304 AT1G68320.1 37.838 111 67 2 25 133 24 134 5.06e-17 82.0
MsaG043304 AT4G00540.1 38.835 103 58 2 24 122 103 204 5.18e-17 84.0
MsaG043304 AT3G23250.1 41.414 99 57 1 25 122 17 115 5.58e-17 82.0
MsaG043304 AT4G37260.1 36.538 104 65 1 19 121 10 113 5.82e-17 82.8
MsaG043304 AT5G39700.1 37.500 120 71 2 25 142 59 176 6.83e-17 79.7
MsaG043304 AT1G26780.1 30.631 111 77 0 25 135 101 211 8.43e-17 81.3
MsaG043304 AT4G34990.1 34.211 152 95 4 24 171 16 166 8.85e-17 81.3
MsaG043304 AT3G13890.2 35.088 114 73 1 10 122 2 115 8.90e-17 82.4
MsaG043304 AT5G16770.4 37.838 111 67 2 25 133 17 127 1.02e-16 82.0
MsaG043304 AT5G16770.3 37.838 111 67 2 25 133 17 127 1.02e-16 82.0
MsaG043304 AT1G26780.2 30.631 111 77 0 25 135 101 211 1.07e-16 82.4
MsaG043304 AT5G16770.1 37.838 111 67 2 25 133 17 127 1.10e-16 82.0
MsaG043304 AT5G16770.2 37.838 111 67 2 25 133 17 127 1.10e-16 82.0
MsaG043304 AT2G32460.2 38.384 99 60 1 25 122 11 109 1.26e-16 83.2
MsaG043304 AT1G06180.1 38.053 113 67 2 25 135 17 128 1.32e-16 80.1
MsaG043304 AT3G61250.1 41.000 100 56 2 25 122 17 115 1.38e-16 81.3
MsaG043304 AT2G32460.1 38.384 99 60 1 25 122 23 121 1.45e-16 83.2
MsaG043304 AT4G09460.1 36.842 114 70 2 24 135 16 129 1.46e-16 79.7
MsaG043304 AT4G01680.3 31.884 138 89 3 25 160 17 151 1.51e-16 79.7
MsaG043304 AT4G38620.1 34.351 131 84 2 24 152 16 146 1.57e-16 80.5
MsaG043304 AT3G24310.1 38.532 109 66 1 25 132 23 131 1.77e-16 80.1
MsaG043304 AT5G40430.1 29.240 171 103 4 25 185 57 219 1.78e-16 80.1
MsaG043304 AT5G35550.1 38.182 110 66 2 14 121 8 117 1.93e-16 80.1
MsaG043304 AT3G01530.1 43.158 95 51 2 25 117 30 123 1.97e-16 78.6
MsaG043304 AT1G73410.2 36.000 100 64 0 25 124 9 108 2.02e-16 78.6
MsaG043304 AT1G73410.1 36.000 100 64 0 25 124 9 108 2.64e-16 79.3
MsaG043304 AT1G57560.2 35.088 114 72 2 25 136 17 130 3.07e-16 79.7
MsaG043304 AT5G56110.1 31.902 163 101 4 25 183 17 173 3.77e-16 80.1
MsaG043304 AT4G13480.1 40.196 102 58 2 25 124 11 111 4.60e-16 79.0
MsaG043304 AT4G01680.1 31.884 138 89 3 25 160 17 151 5.13e-16 80.1
MsaG043304 AT3G47600.1 38.679 106 64 1 25 129 17 122 5.44e-16 79.7
MsaG043304 AT1G74650.1 39.394 99 59 1 25 122 17 115 7.55e-16 79.3
MsaG043304 AT3G48920.1 33.043 115 76 1 8 121 6 120 8.08e-16 78.2
MsaG043304 AT1G57560.1 36.792 106 65 2 25 128 17 122 8.23e-16 79.0
MsaG043304 AT5G62470.2 36.885 122 69 2 25 138 17 138 8.75e-16 79.3
MsaG043304 AT5G06100.1 37.864 103 59 2 25 124 37 137 8.86e-16 80.5
MsaG043304 AT3G13890.1 33.333 123 72 1 10 122 2 124 1.01e-15 79.3
MsaG043304 AT3G60460.1 38.235 102 61 2 25 124 16 117 1.06e-15 78.6
MsaG043304 AT5G06100.5 38.614 101 57 2 25 122 37 135 1.13e-15 80.5
MsaG043304 AT5G06100.2 38.614 101 57 2 25 122 37 135 1.13e-15 80.5
MsaG043304 AT5G06100.3 38.614 101 57 2 25 122 37 135 1.13e-15 80.5
MsaG043304 AT5G06100.4 38.614 101 57 2 25 122 37 135 1.13e-15 80.5
MsaG043304 AT5G65790.1 40.000 100 58 2 25 122 17 116 1.51e-15 79.0
MsaG043304 AT5G17800.1 33.000 100 67 0 25 124 96 195 1.52e-15 78.6
MsaG043304 AT3G12720.1 34.343 99 64 1 25 122 27 125 1.62e-15 78.2
MsaG043304 AT5G12870.1 35.849 106 67 1 25 129 23 128 1.95e-15 77.4
MsaG043304 AT5G26660.1 37.736 106 64 2 25 128 17 122 1.99e-15 78.6
MsaG043304 AT2G16720.1 35.652 115 72 2 24 136 16 130 2.01e-15 77.0
MsaG043304 AT1G35515.1 36.364 99 62 1 25 122 17 115 2.40e-15 75.9
MsaG043304 AT3G11440.2 36.364 99 62 1 25 122 46 144 2.75e-15 79.0
MsaG043304 AT1G74430.1 37.736 106 64 2 25 128 17 122 3.76e-15 76.3
MsaG043304 AT5G59780.3 39.394 99 58 2 25 121 13 111 3.88e-15 75.5
MsaG043304 AT3G46130.1 37.624 101 62 1 25 124 14 114 4.22e-15 75.9
MsaG043304 AT4G28110.1 35.849 106 66 2 25 128 17 122 4.51e-15 76.3
MsaG043304 AT3G28910.1 38.889 108 64 2 25 130 17 124 4.62e-15 77.0
MsaG043304 AT3G11440.3 36.364 99 62 1 25 122 46 144 5.27e-15 78.6
MsaG043304 AT3G11440.4 36.364 99 62 1 25 122 46 144 5.27e-15 78.6
MsaG043304 AT3G11440.1 36.364 99 62 1 25 122 46 144 5.27e-15 78.6
MsaG043304 AT3G49690.1 40.000 100 58 2 25 122 17 116 6.40e-15 76.3
MsaG043304 AT2G39880.1 35.714 98 62 1 25 121 53 150 7.18e-15 77.0
MsaG043304 AT5G60890.1 39.604 101 60 1 25 124 17 117 7.61e-15 75.9
MsaG043304 AT4G26930.1 34.694 98 63 1 25 121 24 121 8.50e-15 77.0
MsaG043304 AT4G01680.2 30.667 150 87 4 25 160 17 163 8.50e-15 76.6
MsaG043304 AT2G26960.1 31.148 122 83 1 1 121 1 122 9.27e-15 77.0
MsaG043304 AT5G10280.1 34.343 99 64 1 25 122 17 115 9.47e-15 76.3
MsaG043304 AT1G18570.1 37.719 114 69 2 25 136 18 131 1.15e-14 76.3
MsaG043304 AT4G05100.1 37.736 106 64 2 25 128 18 123 1.17e-14 75.9
MsaG043304 AT1G18710.1 35.354 99 63 1 25 122 17 115 1.46e-14 74.7
MsaG043304 AT3G28470.1 37.234 94 58 1 25 117 17 110 1.56e-14 75.1
MsaG043304 AT3G02940.2 35.135 111 70 2 25 133 17 127 1.77e-14 75.1
MsaG043304 AT4G21440.1 36.792 106 65 2 25 128 17 122 1.78e-14 75.5
MsaG043304 AT3G02940.1 35.135 111 70 2 25 133 17 127 1.93e-14 75.1
MsaG043304 AT3G02940.3 35.135 111 70 2 25 133 17 127 1.93e-14 75.1
MsaG043304 AT1G63910.1 35.354 99 63 1 25 122 17 115 2.03e-14 75.5
MsaG043304 AT5G14340.1 40.777 103 58 2 25 125 29 130 2.04e-14 74.3
MsaG043304 AT2G31180.1 39.394 99 59 1 25 122 17 115 2.25e-14 73.6
MsaG043304 AT1G34670.1 37.000 100 60 2 25 122 17 115 2.30e-14 75.5
MsaG043304 AT3G08500.1 36.634 101 63 1 25 124 35 135 2.69e-14 74.7
MsaG043304 AT1G16490.1 31.250 128 87 1 25 151 19 146 3.00e-14 73.9
MsaG043304 AT1G66370.1 28.455 246 126 10 24 261 12 215 3.84e-14 72.8
MsaG043304 AT2G47460.1 32.168 143 96 1 25 166 17 159 4.53e-14 74.3
MsaG043304 AT5G65230.1 34.343 99 64 1 25 122 17 115 4.91e-14 73.6
MsaG043304 AT1G74080.1 37.755 98 60 1 25 121 17 114 5.63e-14 73.9
MsaG043304 AT5G14750.3 46.988 83 42 2 58 138 21 103 5.92e-14 70.5
MsaG043304 AT5G57620.1 39.000 100 59 2 25 122 17 116 8.57e-14 73.2
MsaG043304 AT1G48000.1 36.937 111 68 2 25 133 37 147 2.01e-13 70.9
MsaG043304 AT5G15310.4 36.364 99 62 1 25 122 17 115 2.18e-13 70.9
MsaG043304 AT3G01140.1 37.374 99 61 1 25 122 60 158 2.23e-13 72.4
MsaG043304 AT3G01140.2 37.374 99 61 1 25 122 17 115 2.24e-13 72.0
MsaG043304 AT5G55020.1 35.714 98 62 1 25 121 31 128 2.25e-13 73.2
MsaG043304 AT3G12820.1 35.354 99 63 1 25 122 19 117 2.75e-13 70.1
MsaG043304 AT5G49330.1 37.234 94 58 1 25 117 17 110 2.87e-13 71.6
MsaG043304 AT4G17785.2 33.962 106 68 2 25 128 18 123 3.23e-13 71.6
MsaG043304 AT4G17785.1 33.962 106 68 2 25 128 18 123 3.63e-13 71.6
MsaG043304 AT5G15310.1 36.364 99 62 1 25 122 17 115 3.63e-13 71.2
MsaG043304 AT5G15310.2 36.364 99 62 1 25 122 17 115 3.79e-13 71.2
MsaG043304 AT1G09770.1 35.789 95 60 1 24 118 9 102 4.54e-13 72.8
MsaG043304 AT1G66380.1 40.000 95 56 1 24 117 12 106 4.95e-13 67.0
MsaG043304 AT5G54230.1 36.364 99 62 1 25 122 17 115 5.18e-13 70.9
MsaG043304 AT1G79180.1 36.364 99 62 1 25 122 19 117 6.19e-13 70.1
MsaG043304 AT2G26950.1 30.508 118 80 2 9 124 5 122 6.68e-13 70.9
MsaG043304 AT1G56160.1 35.000 100 62 2 25 122 19 117 8.66e-13 69.7
MsaG043304 AT5G07700.1 37.500 104 64 1 24 126 16 119 1.35e-12 69.7
MsaG043304 AT5G07700.2 37.500 104 64 1 24 126 16 119 1.35e-12 69.7
MsaG043304 AT3G53200.1 35.000 100 62 2 25 122 14 112 1.39e-12 68.2
MsaG043304 AT3G27810.2 38.462 78 47 1 55 131 7 84 1.96e-12 66.2
MsaG043304 AT5G23000.1 39.000 100 58 3 25 121 17 116 2.22e-12 68.9
MsaG043304 AT5G59780.2 44.928 69 37 1 54 121 22 90 2.34e-12 67.0
MsaG043304 AT3G62610.1 34.043 94 61 1 25 117 17 110 2.43e-12 68.9
MsaG043304 AT3G46130.3 44.928 69 37 1 54 121 12 80 2.49e-12 67.0
MsaG043304 AT2G36890.1 37.000 100 61 2 25 122 17 116 2.57e-12 68.2
MsaG043304 AT5G40350.2 29.365 126 80 2 55 171 8 133 2.63e-12 65.9
MsaG043304 AT3G46130.4 44.928 69 37 1 54 121 22 90 3.11e-12 67.0
MsaG043304 AT2G36890.2 37.000 100 61 2 25 122 58 157 3.30e-12 68.6
MsaG043304 AT4G25560.1 34.343 99 64 1 25 122 15 113 3.77e-12 67.8
MsaG043304 AT5G61420.2 36.364 99 62 1 25 122 17 115 4.04e-12 68.6
MsaG043304 AT5G07690.1 33.594 128 82 3 24 149 16 142 4.73e-12 68.2
MsaG043304 AT5G26660.2 40.260 77 45 1 58 133 20 96 6.09e-12 67.4
MsaG043304 AT5G49620.1 35.000 140 80 5 25 160 31 163 7.27e-12 67.0
MsaG043304 AT5G52260.1 34.343 99 64 1 25 122 17 115 1.28e-11 65.9
MsaG043304 AT1G66230.1 30.935 139 88 3 25 161 17 149 1.60e-11 65.9
MsaG043304 AT4G12350.1 33.333 129 82 3 25 149 17 145 1.73e-11 65.9
MsaG043304 AT3G18100.1 35.789 95 61 0 24 118 548 642 2.43e-11 67.0
MsaG043304 AT3G18100.4 35.789 95 61 0 24 118 387 481 2.61e-11 67.0
MsaG043304 AT3G18100.3 35.789 95 61 0 24 118 500 594 2.63e-11 67.0
MsaG043304 AT1G56650.1 37.000 100 62 1 24 122 12 111 2.85e-11 64.3
MsaG043304 AT3G18100.2 35.789 95 61 0 24 118 335 429 3.19e-11 66.6
MsaG043304 AT5G62320.1 27.374 179 117 5 25 191 18 195 4.46e-11 63.9
MsaG043304 AT4G22680.1 33.058 121 79 2 25 143 17 137 4.71e-11 63.9
MsaG043304 AT2G37630.1 29.661 118 78 2 18 132 2 117 7.41e-11 64.7

Find 134 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCCATTCCTGACCTTTC+TGG 0.093967 8:-43061065 None:intergenic
TGAGTTCATATTTGTTATTT+TGG 0.117659 8:-43058620 None:intergenic
TGGAAAATTGTTCACATTAT+TGG 0.119491 8:-43058419 None:intergenic
AACTTGTAATGGTGATAATT+TGG 0.189699 8:+43059571 MsaT043304.1:CDS
TGAATCAATGCACTTATCTT+TGG 0.235426 8:-43058654 None:intergenic
CTTACACTGTCTGTAAATTC+TGG 0.293960 8:-43060397 None:intergenic
TGATTAACGTCTAATTGTTT+TGG 0.303436 8:-43061326 None:intergenic
CTTCCTGGGGAGTCCTTGTC+TGG 0.304115 8:-43059509 None:intergenic
TGAAATAGCAAAGGTGGTTT+CGG 0.312899 8:+43057956 MsaT043304.1:CDS
CGTCATCGTCGCCCATCCTT+CGG 0.331520 8:+43062035 MsaT043304.1:CDS
GATCAAACCAATAAACTAAA+TGG 0.332825 8:+43061163 MsaT043304.1:CDS
TAACAAATATGAACTCAAAA+AGG 0.335558 8:+43058626 MsaT043304.1:CDS
ATTGGATTGTTGAGCTAATT+CGG 0.339006 8:-43058401 None:intergenic
AGAGGGGAACAGTTCATTCT+TGG 0.341828 8:-43060328 None:intergenic
GAAATAGCAAAGGTGGTTTC+GGG 0.342062 8:+43057957 MsaT043304.1:CDS
TTTGGAAAGCTCATTGAATC+AGG 0.346675 8:+43059589 MsaT043304.1:CDS
TGTCAAGGTCTCTTACCTTT+CGG 0.350807 8:-43062082 None:intergenic
TCAGCCAAGGATCTGAAAAT+AGG 0.355214 8:-43060361 None:intergenic
TTTCTCCAATGATATCTGTT+TGG 0.367056 8:-43059322 None:intergenic
AAATCGGAAGGAACCGGAAC+GGG 0.368816 8:-43061943 None:intergenic
AATTAGACGTTAATCAGCTT+GGG 0.376036 8:+43061333 MsaT043304.1:CDS
GTGAAAGAGGTTCTTTCTAC+TGG 0.383028 8:+43059671 MsaT043304.1:CDS
CAGAGAACATGGAAAGAGTA+TGG 0.385331 8:+43058688 MsaT043304.1:CDS
ATTATCTGTTCATCACAGTT+TGG 0.388372 8:-43060298 None:intergenic
TTAGGTGGGTGTGCCCTCTC+TGG 0.393668 8:+43061985 MsaT043304.1:CDS
TTGAATGCTAATTTCAAGAA+AGG 0.399589 8:+43057008 MsaT043304.1:CDS
AGCTCATTGAATCAGGATAC+TGG 0.400883 8:+43059596 MsaT043304.1:CDS
GTCATCGTCGCCCATCCTTC+GGG 0.401778 8:+43062036 MsaT043304.1:CDS
ATCTGTATTATAATCTTGAT+AGG 0.404558 8:-43058161 None:intergenic
ATGGGTTCGGTCAGCTGCAA+TGG 0.415913 8:+43060933 MsaT043304.1:intron
TACTGCCATGGCTTCTTCAT+CGG 0.422390 8:-43061095 None:intergenic
TATGCATGATGTCCCCGTTC+CGG 0.427185 8:+43061930 MsaT043304.1:CDS
TTACACTGTCTGTAAATTCT+GGG 0.428890 8:-43060396 None:intergenic
GTACTGTATTCAGAACTTCC+TGG 0.435913 8:-43059524 None:intergenic
CTGAACCAAACAGATATCAT+TGG 0.446280 8:+43059317 MsaT043304.1:CDS
TGAACTGCTGATCTTGTCAT+TGG 0.450783 8:-43058458 None:intergenic
TTGGAAACATGATGCCTGTC+TGG 0.452074 8:-43058439 None:intergenic
TGGGTTCGGTCAGCTGCAAT+GGG 0.453796 8:+43060934 MsaT043304.1:intron
CAATTAGACGTTAATCAGCT+TGG 0.455772 8:+43061332 MsaT043304.1:CDS
AGAAGCCATGTGTTGGTGTA+AGG 0.466544 8:+43060976 MsaT043304.1:CDS
AATGACAAGATCAGCAGTTC+AGG 0.467467 8:+43058460 MsaT043304.1:CDS
GAAAACGGCGGAAAGCAAAT+CGG 0.472201 8:-43061959 None:intergenic
GAAAGCAAATCGGAAGGAAC+CGG 0.474558 8:-43061949 None:intergenic
ACACCCACCTAAGGAGAAAA+CGG 0.476508 8:-43061974 None:intergenic
CAACATAAGTCAACTTGTAA+TGG 0.481197 8:+43059560 MsaT043304.1:CDS
TACTGTATTCAGAACTTCCT+GGG 0.485330 8:-43059523 None:intergenic
CATACCATACCTCACATAAG+AGG 0.485415 8:-43057055 None:intergenic
AATTCGGCAAGTGGTGCTCT+TGG 0.486861 8:-43058385 None:intergenic
TGTCAAATCAAGAATCGTAC+AGG 0.487028 8:+43061276 MsaT043304.1:intron
GCAATGGGCTTTCATGAGAA+TGG 0.487749 8:+43060949 MsaT043304.1:CDS
GGTTCTTTCTACTGGAAAAG+TGG 0.489600 8:+43059679 MsaT043304.1:CDS
GGAGGACTTGGATTTAGTGC+AGG 0.492733 8:+43060997 MsaT043304.1:CDS
GAAATGCAAGCTACACAACT+CGG 0.493299 8:+43059623 MsaT043304.1:CDS
AACTATTGCATCCAAATTCA+AGG 0.494397 8:+43056839 MsaT043304.1:CDS
AGAGAACAGATCGGAAATCA+TGG 0.496272 8:+43056512 MsaT043304.1:CDS
TCCCCTCTTCTTGCGGAGTG+TGG 0.498113 8:-43058101 None:intergenic
AATGCTAATTTCAAGAAAGG+TGG 0.507910 8:+43057011 MsaT043304.1:CDS
CATAAGAGGATATCTTCGTC+TGG 0.513651 8:-43057041 None:intergenic
AATCTGTTGTTTAATGCAAG+TGG 0.515527 8:+43061127 MsaT043304.1:CDS
AAATGCAAGCTACACAACTC+GGG 0.520511 8:+43059624 MsaT043304.1:CDS
CATAAGCGTCACCCGAAGGA+TGG 0.520727 8:-43062047 None:intergenic
GAACGGGGACATCATGCATA+TGG 0.527363 8:-43061927 None:intergenic
TGAAGAATCGTCTACGAAGA+AGG 0.534329 8:+43055716 MsaT043304.1:CDS
GTGTTGGTGTAAGGAGGACT+TGG 0.538122 8:+43060985 MsaT043304.1:CDS
CTCCACACTCCGCAAGAAGA+GGG 0.541629 8:+43058099 MsaT043304.1:CDS
AGTATGTGAAGGTGTGAAAG+AGG 0.542143 8:+43059658 MsaT043304.1:CDS
CTACAAGACAATGCAGAAGA+AGG 0.547968 8:+43056868 MsaT043304.1:CDS
TTTAAGAGTAGTAATGAGAG+AGG 0.548619 8:+43059386 MsaT043304.1:CDS
AGTCAAGAACCAGAAAGGTC+AGG 0.548767 8:+43061056 MsaT043304.1:CDS
GAGGACTTGGATTTAGTGCA+GGG 0.551383 8:+43060998 MsaT043304.1:CDS
AGAATCGTACAGGGAATACA+AGG 0.553257 8:+43061286 MsaT043304.1:intron
GAACATGGAAAGAGTATGGA+AGG 0.555219 8:+43058692 MsaT043304.1:CDS
TTTAATGCAAGTGGGTTGCA+TGG 0.557655 8:+43061136 MsaT043304.1:CDS
CCAAACGATGGATACGAAGA+AGG 0.560489 8:+43055677 None:intergenic
ATAAGCGTCACCCGAAGGAT+GGG 0.562802 8:-43062046 None:intergenic
GGAAGTTCTGAATACAGTAC+AGG 0.563238 8:+43059527 MsaT043304.1:CDS
CTGTCTGTAAATTCTGGGGT+TGG 0.563447 8:-43060391 None:intergenic
AATAATTGATTCAGAGAACA+TGG 0.563794 8:+43058677 MsaT043304.1:CDS
AGAACCAGAAAGGTCAGGAA+TGG 0.563994 8:+43061061 MsaT043304.1:CDS
ATCTGTTGTTTAATGCAAGT+GGG 0.566068 8:+43061128 MsaT043304.1:CDS
AGAACTTAAACTACCTCAAG+CGG 0.566404 8:-43059415 None:intergenic
AAATAGGAGTCACTTGAAGA+GGG 0.570209 8:-43060345 None:intergenic
GGAACAGTTCATTCTTGGCA+AGG 0.573554 8:-43060323 None:intergenic
AAAATAGGAGTCACTTGAAG+AGG 0.573906 8:-43060346 None:intergenic
TGGTTCAGAAACTCTAGAAG+TGG 0.583666 8:-43059302 None:intergenic
TCTCCACACTCCGCAAGAAG+AGG 0.585369 8:+43058098 MsaT043304.1:CDS
AGAGAGGGCACACCCACCTA+AGG 0.586352 8:-43061983 None:intergenic
ACGAAGAAGGAGAAGCAACA+AGG 0.590316 8:+43055690 MsaT043304.1:CDS
GAACTTAAACTACCTCAAGC+GGG 0.591809 8:-43059414 None:intergenic
ACGAGGATACATGTATCAGA+GGG 0.595792 8:-43062015 None:intergenic
GGTTGGAATTCCTTCAGCCA+AGG 0.598102 8:-43060374 None:intergenic
AGGAGCGGCATATTGTGACT+TGG 0.598859 8:+43055736 MsaT043304.1:CDS
CTAATTTCAAGAAAGGTGGA+TGG 0.600077 8:+43057015 MsaT043304.1:CDS
TGTTGAGCTAATTCGGCAAG+TGG 0.604507 8:-43058394 None:intergenic
TGGGCTTTCATGAGAATGGA+GGG 0.605811 8:+43060953 MsaT043304.1:CDS
GACGAGGATACATGTATCAG+AGG 0.606711 8:-43062016 None:intergenic
ATGGGCTTTCATGAGAATGG+AGG 0.610464 8:+43060952 MsaT043304.1:CDS
AAACCAGACAAGGACTCCCC+AGG 0.613720 8:+43059506 MsaT043304.1:CDS
TTGGGAGTCAAGAACCAGAA+AGG 0.613997 8:+43061051 MsaT043304.1:CDS
CGAAGAAGGAGAAGCAACAA+GGG 0.615386 8:+43055691 MsaT043304.1:CDS
CAAATCGGAAGGAACCGGAA+CGG 0.616823 8:-43061944 None:intergenic
AGAGAGGCAATTCCCGCTTG+AGG 0.617366 8:+43059402 MsaT043304.1:CDS
AGCCATGTGTTGGTGTAAGG+AGG 0.619669 8:+43060979 MsaT043304.1:CDS
TCCACACTCCGCAAGAAGAG+GGG 0.620043 8:+43058100 MsaT043304.1:CDS
TACACTGTCTGTAAATTCTG+GGG 0.621792 8:-43060395 None:intergenic
CAGAGGGGCTTGTGCCAGAG+AGG 0.622734 8:-43061999 None:intergenic
TATTGTGACTTGGACTCAAG+AGG 0.624420 8:+43055746 MsaT043304.1:CDS
ATGAAACATCTCAAACCGAA+AGG 0.627786 8:+43062067 MsaT043304.1:CDS
AAGGATGGGCGACGATGACG+AGG 0.630487 8:-43062032 None:intergenic
ATGGACTGAAATAGCAAAGG+TGG 0.630996 8:+43057950 MsaT043304.1:CDS
ACGGCGGAAAGCAAATCGGA+AGG 0.630996 8:-43061955 None:intergenic
AGACACCGATGAAGAAGCCA+TGG 0.631049 8:+43061090 MsaT043304.1:CDS
GATATACTAAGAGAACAGAT+CGG 0.632217 8:+43056503 MsaT043304.1:CDS
GTTTCATAAGCGTCACCCGA+AGG 0.634140 8:-43062051 None:intergenic
AGAGGGGCTTGTGCCAGAGA+GGG 0.635025 8:-43061998 None:intergenic
AGACGTTAATCAGCTTGGGG+TGG 0.635616 8:+43061337 MsaT043304.1:CDS
ACATTGATTCAAATAGCAAG+AGG 0.635696 8:+43058131 MsaT043304.1:CDS
CAGATGGACTGAAATAGCAA+AGG 0.637124 8:+43057947 MsaT043304.1:CDS
AATCGGAAGGAACCGGAACG+GGG 0.637683 8:-43061942 None:intergenic
GCTTGTAAGTCATACAGTCA+AGG 0.638751 8:+43059361 MsaT043304.1:CDS
ATTAGACGTTAATCAGCTTG+GGG 0.639962 8:+43061334 MsaT043304.1:CDS
CGAAGATATCCTCTTATGTG+AGG 0.640010 8:+43057046 MsaT043304.1:CDS
TCTACTGGAAAAGTGGAACA+AGG 0.646785 8:+43059686 MsaT043304.1:CDS
TAGCAAAGGTGGTTTCGGGA+AGG 0.647071 8:+43057961 MsaT043304.1:CDS
AATAGGAGTCACTTGAAGAG+GGG 0.664295 8:-43060344 None:intergenic
TAGGCAAATAAAACCAGACA+AGG 0.664638 8:+43059496 MsaT043304.1:intron
TGGAGGGAGAAGCCATGTGT+TGG 0.667678 8:+43060969 MsaT043304.1:CDS
GTCAAATCAAGAATCGTACA+GGG 0.678745 8:+43061277 MsaT043304.1:intron
GTCCTCCTTACACCAACACA+TGG 0.684334 8:-43060981 None:intergenic
AATGCAAGCTACACAACTCG+GGG 0.696437 8:+43059625 MsaT043304.1:CDS
AATCGTCTACGAAGAAGGAG+CGG 0.700661 8:+43055721 MsaT043304.1:CDS
ACTGTATTCAGAACTTCCTG+GGG 0.716719 8:-43059522 None:intergenic
CCCACCTAAGGAGAAAACGG+CGG 0.729618 8:-43061971 None:intergenic
CGAGGATACATGTATCAGAG+GGG 0.743757 8:-43062014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 43055684 43062092 43055684 ID=MsaG043304
Chr8 mRNA 43055684 43062092 43055684 ID=MsaT043304.1;Parent=MsaG043304
Chr8 exon 43055684 43055767 43055684 ID=MsaT043304.1.exon1;Parent=MsaT043304.1
Chr8 CDS 43055684 43055767 43055684 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43056497 43056543 43056497 ID=MsaT043304.1.exon2;Parent=MsaT043304.1
Chr8 CDS 43056497 43056543 43056497 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43056833 43056889 43056833 ID=MsaT043304.1.exon3;Parent=MsaT043304.1
Chr8 CDS 43056833 43056889 43056833 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43056995 43057067 43056995 ID=MsaT043304.1.exon4;Parent=MsaT043304.1
Chr8 CDS 43056995 43057067 43056995 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43057927 43057982 43057927 ID=MsaT043304.1.exon5;Parent=MsaT043304.1
Chr8 CDS 43057927 43057982 43057927 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43058072 43058221 43058072 ID=MsaT043304.1.exon6;Parent=MsaT043304.1
Chr8 CDS 43058072 43058221 43058072 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43058300 43058481 43058300 ID=MsaT043304.1.exon7;Parent=MsaT043304.1
Chr8 CDS 43058300 43058481 43058300 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43058619 43058713 43058619 ID=MsaT043304.1.exon8;Parent=MsaT043304.1
Chr8 CDS 43058619 43058713 43058619 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43059302 43059423 43059302 ID=MsaT043304.1.exon9;Parent=MsaT043304.1
Chr8 CDS 43059302 43059423 43059302 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43059499 43059707 43059499 ID=MsaT043304.1.exon10;Parent=MsaT043304.1
Chr8 CDS 43059499 43059707 43059499 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43060290 43060414 43060290 ID=MsaT043304.1.exon11;Parent=MsaT043304.1
Chr8 CDS 43060290 43060414 43060290 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43060947 43061184 43060947 ID=MsaT043304.1.exon12;Parent=MsaT043304.1
Chr8 CDS 43060947 43061184 43060947 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43061288 43061370 43061288 ID=MsaT043304.1.exon13;Parent=MsaT043304.1
Chr8 CDS 43061288 43061370 43061288 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Chr8 exon 43061916 43062092 43061916 ID=MsaT043304.1.exon14;Parent=MsaT043304.1
Chr8 CDS 43061916 43062092 43061916 ID=cds.MsaT043304.1;Parent=MsaT043304.1
Gene Sequence

>MsaT043304.1

ATGGATACGAAGAAGGAGAAGCAACAAGGGAATGAAGAATCGTCTACGAAGAAGGAGCGGCATATTGTGACTTGGACTCAAGAGGAGGATGATATACTAAGAGAACAGATCGGAAATCATGGAACTGAAAATTGGGCAACTATTGCATCCAAATTCAAGGACAAAACTACAAGACAATGCAGAAGAAGATGGTACACTTATTTGAATGCTAATTTCAAGAAAGGTGGATGGACACCAGACGAAGATATCCTCTTATGTGAGGCTCAAAAAATATTTGGAAACAGATGGACTGAAATAGCAAAGGTGGTTTCGGGAAGAACGGATAATGCTGTAAAAAATCGTTTCTCCACACTCCGCAAGAAGAGGGGAAAAAATGACATTGATTCAAATAGCAAGAGGAATATTTCCTATCAAGATTATAATACAGATGCAATGTCAGAATCTGCCATGCCAGTTAAAAAAACGAGGACGGCCCATATCCCCGATGATGCAAAAAAGATCAACTTTGGAGACAGATCACATTTGCGAAATGCAATTTCATTAAATCAGCAGCCAAGAGCACCACTTGCCGAATTAGCTCAACAATCCAATAATGTGAACAATTTTCCAGACAGGCATCATGTTTCCAATGACAAGATCAGCAGTTCAGGCCAAAATAACAAATATGAACTCAAAAAGGATGATCCAAAGATAAGTGCATTGATTCAAATAATTGATTCAGAGAACATGGAAAGAGTATGGAAGCCACTTCTAGAGTTTCTGAACCAAACAGATATCATTGGAGAAAAAATTGCAGTTTTACAGCTTGTAAGTCATACAGTCAAGGAGTTTAAGAGTAGTAATGAGAGAGGCAATTCCCGCTTGAGGCAAATAAAACCAGACAAGGACTCCCCAGGAAGTTCTGAATACAGTACAGGATTAACTCTGCAACATAAGTCAACTTGTAATGGTGATAATTTGGAAAGCTCATTGAATCAGGATACTGGAACTGAAATGCAAGCTACACAACTCGGGGTTAAAAAAGAAGTATGTGAAGGTGTGAAAGAGGTTCTTTCTACTGGAAAAGTGGAACAAGATATGATACCAAACTGTGATGAACAGATAATTGCCTTGCCAAGAATGAACTGTTCCCCTCTTCAAGTGACTCCTATTTTCAGATCCTTGGCTGAAGGAATTCCAACCCCAGAATTTACAGACAGTCTGCAATGGGCTTTCATGAGAATGGAGGGAGAAGCCATGTGTTGGTGTAAGGAGGACTTGGATTTAGTGCAGGGAATCACTTTCCACAGACCTGATAAAAAGATTTGGGAGTCAAGAACCAGAAAGGTCAGGAATGGAGTAACAGACACCGATGAAGAAGCCATGGCAGTAAAAGAAGCAAATCTGTTGTTTAATGCAAGTGGGTTGCATGGAGAAGATCAAACCAATAAACTAAATGAATCGTACAGGGAATACAAGGAGATCCAAACCCCTCCACCAAAACAATTAGACGTTAATCAGCTTGGGGTGGACTTACACATTTTTGCAATCTACCATATGCATGATGTCCCCGTTCCGGTTCCTTCCGATTTGCTTTCCGCCGTTTTCTCCTTAGGTGGGTGTGCCCTCTCTGGCACAAGCCCCTCTGATACATGTATCCTCGTCATCGTCGCCCATCCTTCGGGTGACGCTTATGAAACATCTCAAACCGAAAGGTAA
Protein sequence

>MsaT043304.1

MDTKKEKQQGNEESSTKKERHIVTWTQEEDDILREQIGNHGTENWATIASKFKDKTTRQCRRRWYTYLNANFKKGGWTPDEDILLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLRKKRGKNDIDSNSKRNISYQDYNTDAMSESAMPVKKTRTAHIPDDAKKINFGDRSHLRNAISLNQQPRAPLAELAQQSNNVNNFPDRHHVSNDKISSSGQNNKYELKKDDPKISALIQIIDSENMERVWKPLLEFLNQTDIIGEKIAVLQLVSHTVKEFKSSNERGNSRLRQIKPDKDSPGSSEYSTGLTLQHKSTCNGDNLESSLNQDTGTEMQATQLGVKKEVCEGVKEVLSTGKVEQDMIPNCDEQIIALPRMNCSPLQVTPIFRSLAEGIPTPEFTDSLQWAFMRMEGEAMCWCKEDLDLVQGITFHRPDKKIWESRTRKVRNGVTDTDEEAMAVKEANLLFNASGLHGEDQTNKLNESYREYKEIQTPPPKQLDVNQLGVDLHIFAIYHMHDVPVPVPSDLLSAVFSLGGCALSGTSPSDTCILVIVAHPSGDAYETSQTER*