AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG043504

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG043504 MtrunA17_Chr8g0364231 95.279 1398 55 1 1 1398 1 1387 0.0 2653
MsaG043504 MtrunA17_Chr5g0415031 68.688 1418 392 20 1 1396 1 1388 0.0 1841
MsaG043504 MtrunA17_Chr6g0452001 51.119 1430 559 31 1 1375 1 1345 0.0 1262
MsaG043504 MtrunA17_Chr8g0368731 91.792 597 38 1 682 1278 26 611 0.0 1099
MsaG043504 MtrunA17_Chr6g0452021 45.591 465 170 11 36 500 37 418 2.10e-101 332
MsaG043504 MtrunA17_Chr1g0206781 65.116 86 30 0 32 117 1 86 1.72e-30 117
MsaG043504 MtrunA17_Chr1g0206771 43.590 156 81 1 35 190 9 157 2.91e-29 115
MsaG043504 MtrunA17_Chr1g0206771 56.522 69 30 0 42 110 95 163 1.65e-17 82.0
MsaG043504 MtrunA17_Chr3g0077911 41.250 160 89 3 36 194 2 157 5.57e-28 111
MsaG043504 MtrunA17_Chr3g0077911 63.636 77 27 1 36 111 84 160 8.80e-23 96.7
MsaG043504 MtrunA17_Chr3g0077861 40.625 160 90 3 36 194 2 157 3.81e-27 109
MsaG043504 MtrunA17_Chr3g0077861 63.636 77 27 1 36 111 84 160 2.79e-23 98.2
MsaG043504 MtrunA17_Chr3g0077881 42.331 163 84 4 36 190 2 162 2.68e-25 104
MsaG043504 MtrunA17_Chr3g0077881 54.545 77 34 1 35 110 92 168 1.61e-17 82.0
MsaG043504 MtrunA17_Chr3g0077891 42.857 161 86 3 36 190 2 162 5.01e-25 103
MsaG043504 MtrunA17_Chr3g0077891 55.844 77 33 1 35 110 92 168 1.28e-20 90.9
MsaG043504 MtrunA17_Chr1g0205821 37.500 152 95 0 40 191 11 162 5.95e-25 103
MsaG043504 MtrunA17_Chr1g0205821 47.222 72 38 0 43 114 100 171 4.79e-15 74.7
MsaG043504 MtrunA17_Chr8g0362641 36.866 217 108 7 224 418 67 276 1.14e-24 105
MsaG043504 MtrunA17_Chr8g0362641 34.158 202 90 5 227 423 36 199 2.27e-21 96.3
MsaG043504 MtrunA17_Chr3g0077941 42.500 160 87 3 36 190 2 161 1.99e-24 101
MsaG043504 MtrunA17_Chr3g0077941 53.165 79 36 1 35 112 91 169 1.00e-18 85.5
MsaG043504 MtrunA17_Chr4g0075861 35.193 233 121 6 41 263 11 223 3.98e-24 106
MsaG043504 MtrunA17_Chr4g0075861 35.897 156 97 2 36 191 83 235 5.34e-19 90.9
MsaG043504 MtrunA17_Chr4g0075861 53.846 78 34 1 35 112 167 242 1.06e-16 84.0
MsaG043504 MtrunA17_Chr1g0205811 59.211 76 31 0 42 117 14 89 5.16e-23 95.9
MsaG043504 MtrunA17_Chr7g0218891 40.580 138 78 3 56 191 115 250 1.33e-22 99.4
MsaG043504 MtrunA17_Chr7g0218891 35.948 153 92 4 43 191 14 164 8.05e-18 85.5
MsaG043504 MtrunA17_Chr7g0218891 40.860 93 54 1 25 117 171 262 9.89e-14 73.2
MsaG043504 MtrunA17_Chr4g0075971 30.351 313 177 8 41 343 11 292 1.46e-22 104
MsaG043504 MtrunA17_Chr4g0075971 34.615 156 99 2 36 191 83 235 1.87e-16 84.7
MsaG043504 MtrunA17_Chr4g0075971 53.846 78 34 1 35 112 167 242 2.69e-16 84.3
MsaG043504 MtrunA17_Chr8g0364021 53.571 84 39 0 34 117 36 119 1.70e-22 98.2
MsaG043504 MtrunA17_Chr7g0218911 45.652 92 45 1 46 137 2 88 4.85e-22 92.8
MsaG043504 MtrunA17_Chr1g0156171 40.260 154 35 4 72 225 17 113 1.34e-21 91.7
MsaG043504 MtrunA17_Chr1g0205801 51.282 78 38 0 40 117 10 87 3.22e-19 84.7
MsaG043504 MtrunA17_Chr5g0413041 44.355 124 23 4 1226 1306 2 122 1.60e-18 84.3
MsaG043504 MtrunA17_Chr1g0205861 47.436 78 40 1 34 110 7 84 3.96e-17 79.0
MsaG043504 MtrunA17_Chr2g0328701 43.564 101 48 2 41 141 28 119 5.15e-17 79.0
MsaG043504 MtrunA17_Chr3g0077811 51.282 78 37 1 36 112 7 84 3.38e-16 76.3
MsaG043504 MtrunA17_Chr1g0209201 46.429 84 40 2 42 121 16 98 8.64e-15 73.2
MsaG043504 MtrunA17_Chr1g0205831 52.703 74 34 1 45 117 76 149 9.01e-15 73.9
MsaG043504 MtrunA17_Chr1g0205831 33.784 148 83 3 44 191 4 136 2.18e-14 73.2
MsaG043504 MtrunA17_Chr7g0256011 47.222 72 38 0 39 110 13 84 3.70e-13 67.8
MsaG043504 MtrunA17_Chr7g0218901 45.455 55 30 0 136 190 1 55 1.21e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG043504 AT1G24190.3 54.422 1402 548 27 32 1415 1 1329 0.0 1390
MsaG043504 AT1G24190.2 54.986 1384 535 27 32 1396 1 1315 0.0 1389
MsaG043504 AT1G70060.2 55.273 1375 509 30 32 1384 1 1291 0.0 1383
MsaG043504 AT1G70060.1 55.273 1375 509 30 32 1384 1 1291 0.0 1383
MsaG043504 AT1G24190.1 54.611 1388 538 28 32 1396 1 1319 0.0 1375
MsaG043504 AT5G15020.2 49.437 1422 592 34 1 1386 1 1331 0.0 1209
MsaG043504 AT5G15020.1 49.024 1434 592 35 1 1386 1 1343 0.0 1202
MsaG043504 AT3G01320.1 48.197 1442 587 35 1 1379 1 1345 0.0 1177
MsaG043504 AT3G01320.2 47.781 1442 581 35 1 1379 1 1333 0.0 1161
MsaG043504 AT1G59890.2 47.500 1000 386 24 407 1388 253 1131 0.0 787
MsaG043504 AT1G59890.2 57.328 232 93 3 1 228 1 230 7.93e-69 254
MsaG043504 AT1G59890.1 44.334 1103 454 27 340 1388 130 1126 0.0 786
MsaG043504 AT1G59890.1 57.328 232 93 3 1 228 1 230 7.82e-69 254
MsaG043504 AT1G59890.4 44.334 1103 454 27 340 1388 130 1126 0.0 786
MsaG043504 AT1G59890.4 57.328 232 93 3 1 228 1 230 7.45e-69 254
MsaG043504 AT1G59890.3 44.152 1103 452 28 340 1388 130 1122 0.0 775
MsaG043504 AT1G59890.3 57.328 232 93 3 1 228 1 230 7.35e-69 254
MsaG043504 AT1G10450.2 40.797 728 348 19 284 965 68 758 4.24e-134 442
MsaG043504 AT1G10450.2 42.886 499 241 18 897 1382 623 1090 3.81e-97 339
MsaG043504 AT1G10450.2 51.316 228 93 4 1 228 1 210 3.03e-59 224
MsaG043504 AT1G10450.1 40.797 728 348 19 284 965 68 758 4.24e-134 442
MsaG043504 AT1G10450.1 42.886 499 241 18 897 1382 623 1090 3.81e-97 339
MsaG043504 AT1G10450.1 51.316 228 93 4 1 228 1 210 3.03e-59 224
MsaG043504 AT1G10450.3 40.797 728 348 19 284 965 119 809 1.47e-133 442
MsaG043504 AT1G10450.3 42.886 499 241 18 897 1382 674 1141 1.09e-96 338
MsaG043504 AT1G10450.3 51.316 228 93 4 1 228 52 261 5.38e-59 223
MsaG043504 AT1G24200.1 62.130 169 61 1 34 202 6 171 8.21e-64 216
MsaG043504 AT1G70030.1 54.088 159 71 2 32 190 1 157 7.04e-48 168
MsaG043504 AT1G70030.2 43.373 166 60 2 25 190 5 136 8.57e-33 124
MsaG043504 AT1G24230.1 39.645 169 97 3 37 204 81 245 2.36e-31 124
MsaG043504 AT1G24230.1 32.716 162 90 3 32 189 1 147 3.15e-17 83.6
MsaG043504 AT1G70030.3 51.327 113 54 1 25 137 5 116 6.31e-30 115
MsaG043504 AT5G15025.1 52.459 122 51 3 1 116 1 121 1.09e-27 109
MsaG043504 AT5G35610.1 40.268 149 74 2 34 171 2 146 2.00e-25 104
MsaG043504 AT1G27280.1 41.606 137 79 1 39 174 78 214 7.88e-25 105
MsaG043504 AT1G24250.1 39.610 154 69 2 39 191 117 247 2.17e-23 101
MsaG043504 AT1G10250.1 70.833 72 18 2 1181 1251 1 70 3.84e-23 95.1
MsaG043504 AT1G23810.1 36.538 156 75 2 39 193 106 238 2.32e-22 98.2
MsaG043504 AT4G12020.11 59.756 82 32 1 38 119 304 384 1.45e-21 102
MsaG043504 AT4G12020.6 59.756 82 32 1 38 119 304 384 2.12e-21 102
MsaG043504 AT4G12020.8 59.756 82 32 1 38 119 304 384 2.12e-21 102
MsaG043504 AT4G12020.1 59.756 82 32 1 38 119 304 384 2.17e-21 102
MsaG043504 AT4G12020.9 59.756 82 32 1 38 119 304 384 2.17e-21 102
MsaG043504 AT4G12020.7 59.756 82 32 1 38 119 304 384 2.26e-21 102
MsaG043504 AT4G12020.3 59.756 82 32 1 38 119 304 384 2.33e-21 102
MsaG043504 AT4G12020.4 59.756 82 32 1 38 119 304 384 2.40e-21 102
MsaG043504 AT4G12020.2 59.756 82 32 1 38 119 304 384 2.46e-21 102
MsaG043504 AT4G12020.10 59.756 82 32 1 38 119 304 384 2.47e-21 102
MsaG043504 AT4G12020.5 59.756 82 32 1 38 119 237 317 2.60e-21 102
MsaG043504 AT1G27250.1 53.086 81 37 1 26 105 4 84 2.98e-20 89.0
MsaG043504 AT1G27220.1 54.795 73 33 0 37 109 9 81 7.20e-20 89.4
MsaG043504 AT1G24210.1 33.333 162 86 3 38 198 10 150 9.42e-19 85.1
MsaG043504 AT1G27260.1 33.553 152 77 2 39 189 90 218 4.33e-17 82.4
MsaG043504 AT1G27260.1 31.818 154 101 1 40 189 1 154 5.43e-16 79.3
MsaG043504 AT5G15040.1 47.222 72 38 0 45 116 6 77 2.07e-14 70.5
MsaG043504 AT5G15040.3 47.222 72 38 0 45 116 6 77 2.07e-14 70.5
MsaG043504 AT5G15040.2 47.222 72 38 0 45 116 6 77 2.07e-14 70.5
MsaG043504 AT1G27270.1 37.013 154 73 3 39 191 110 240 1.45e-13 72.4

Find 296 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCAGAGTTTAATATATTT+TGG 0.139308 8:+47032915 MsaT043504.1:CDS
CTAGCATCTCCATTTCTATT+AGG 0.152574 8:-47039020 None:intergenic
AGGGCATAAAGATTTGATTT+TGG 0.194302 8:+47028714 MsaT043504.1:CDS
GAATTCTCTTTACAGTTTAC+TGG 0.222931 8:+47042509 MsaT043504.1:CDS
TGCATATCCCTTTGGCAAAA+AGG 0.227033 8:-47028746 None:intergenic
TCGGAGAATGGTGATGTTTC+TGG 0.273876 8:+47041890 MsaT043504.1:CDS
GATGACTGTCGAGCTATTAT+TGG 0.275868 8:+47042561 MsaT043504.1:CDS
CGTATTGAGGAGCATTTATC+AGG 0.277753 8:+47032634 MsaT043504.1:CDS
GAAAGGTCCAGTTCATTTAT+AGG 0.279430 8:-47031986 None:intergenic
TTCTTTGATCTCTCCCAATA+AGG 0.279605 8:-47038631 None:intergenic
TCTATTCAGTTGATGGACTA+TGG 0.285714 8:+47044438 MsaT043504.1:CDS
GACAGCATCTTCTGTGTCTT+CGG 0.287876 8:-47038895 None:intergenic
ACTCTTTAATTCGAACAAAA+AGG 0.290426 8:+47045019 MsaT043504.1:CDS
ACTGTGGATTACAGCCTTAT+TGG 0.294466 8:+47038617 MsaT043504.1:intron
CAAGAATTTGATTGTTCAAA+TGG 0.296012 8:-47039047 None:intergenic
GGGAAAATATGCCGATATTA+TGG 0.308777 8:+47031266 MsaT043504.1:CDS
TGAACTCTTAAGATTCATTA+TGG 0.312082 8:-47038994 None:intergenic
TGTCTCTTTCTCGGAGTTCC+CGG 0.312860 8:-47031889 None:intergenic
TCTGGCTAGCTAATGGTATT+GGG 0.318480 8:-47032169 None:intergenic
TGCGCTTAAGACTGAAACTT+TGG 0.321747 8:+47039136 MsaT043504.1:CDS
TAGCATCTCCATTTCTATTA+GGG 0.322099 8:-47039019 None:intergenic
CAGTGGATTTGTCTCTTTCT+CGG 0.322488 8:-47031898 None:intergenic
TGGATAAAGTGATGAAGATT+TGG 0.323501 8:+47038823 MsaT043504.1:CDS
CATGTAGAAGGATTCCTTGC+TGG 0.327045 8:+47031614 MsaT043504.1:intron
AAGTCTAAACAGCACATAAA+AGG 0.327683 8:-47042158 None:intergenic
CTGTGGATTACAGCCTTATT+GGG 0.329594 8:+47038618 MsaT043504.1:intron
TTCTGGCTAGCTAATGGTAT+TGG 0.329945 8:-47032170 None:intergenic
TCGATTGTCTATTCAGTTGA+TGG 0.335717 8:+47044431 MsaT043504.1:CDS
ATTGACACAGCAGTCACTTC+TGG 0.340676 8:-47044471 None:intergenic
TTTGTTGTCCTCAGTAATTT+TGG 0.341496 8:+47045530 MsaT043504.1:CDS
GAATGCATCTCTAGCCTTGC+CGG 0.349218 8:+47032844 MsaT043504.1:CDS
ACTCCTCCTGTTTCTGCTTC+AGG 0.353246 8:-47032880 None:intergenic
TTTGTTCCTCACGTCTATTT+TGG 0.354521 8:-47041787 None:intergenic
GTTAATGATGATGTAATTCC+AGG 0.355314 8:+47032598 MsaT043504.1:CDS
TATGAACAATCAAGAAAATC+TGG 0.357570 8:+47043983 MsaT043504.1:CDS
CATCTTCTGCTGAAAAGAAA+TGG 0.368069 8:+47042341 MsaT043504.1:CDS
GCCCCATTTGTGGACGTATC+TGG 0.369809 8:-47041581 None:intergenic
AGAGTGAAGGAGCTGTTTAA+AGG 0.373369 8:+47028694 MsaT043504.1:CDS
CATCACTTTATCCAATTGTT+CGG 0.377685 8:-47038814 None:intergenic
ACAGCATCTTCTGTGTCTTC+GGG 0.378376 8:-47038894 None:intergenic
AGAGATCGGGGCAGGGATGA+TGG 0.382115 8:+47031851 MsaT043504.1:CDS
AGAAGAAAGCGCTCTGAGTA+TGG 0.382603 8:-47042052 None:intergenic
GGATACTCAAATTCCAAGTT+AGG 0.382796 8:-47038726 None:intergenic
TTTATTCATCAGAATCTTTG+TGG 0.383069 8:+47031783 MsaT043504.1:intron
AAATGCTCCTCAATACGAAT+TGG 0.386991 8:-47032628 None:intergenic
TTGACTCTTGATACTTTGTC+AGG 0.387025 8:-47039203 None:intergenic
TTTGGGTAGTAGACGGTAGC+TGG 0.387988 8:-47032029 None:intergenic
GTTCTTCTTGCAATTGCTGC+TGG 0.389147 8:+47038684 MsaT043504.1:CDS
TATGTCGGCCCGGTGTTTCA+TGG 0.390088 8:+47042097 MsaT043504.1:CDS
AGAAAGAGATAGGAGAGAAC+AGG 0.390143 8:+47029731 MsaT043504.1:CDS
TAGGAAGTCATTGTGCAAAT+AGG 0.391895 8:-47044511 None:intergenic
ATAGCTTCTTCAAATTCAAC+AGG 0.395831 8:-47028811 None:intergenic
GCAGCTGCTCCTGAAGTATC+AGG 0.398314 8:-47029404 None:intergenic
GAATGGCAAGCAAATGGAAT+TGG 0.399132 8:+47039074 MsaT043504.1:CDS
ATCAAATCCCTCCATAATAT+CGG 0.402165 8:-47031277 None:intergenic
TACAAATCTTCCTGTATCTC+TGG 0.403053 8:-47038753 None:intergenic
CGAGAAGATCTCCATGGTCT+TGG 0.410167 8:-47029361 None:intergenic
TGTGCTGTTTAGACTTCATC+AGG 0.412412 8:+47042165 MsaT043504.1:CDS
TTTGTGACAGCTGTGAGCTT+TGG 0.412473 8:-47041618 None:intergenic
AGTTCAAACCCTAATAGAAA+TGG 0.412975 8:+47039011 MsaT043504.1:CDS
AGGAGCTCGGCAATGACAAC+AGG 0.413939 8:+47029467 MsaT043504.1:CDS
ATCACACCTCTGTCAAGTTC+TGG 0.418088 8:-47029657 None:intergenic
GAACAAATTTGTGGGGTAGC+TGG 0.420110 8:+47041803 MsaT043504.1:CDS
AGTACAAGTTATCAATGGTT+TGG 0.420599 8:+47044745 MsaT043504.1:CDS
GTAATCCTCTCCTTCGAGAT+AGG 0.421093 8:+47029447 MsaT043504.1:CDS
AGTTTGTACAACCGAACAAT+TGG 0.427028 8:+47038803 MsaT043504.1:CDS
TCCTCACAAGCGGACGAGTT+AGG 0.427698 8:-47029888 None:intergenic
TCCATCTCCTTCAACATCAT+TGG 0.431989 8:-47042020 None:intergenic
TCTTGGTAAACTGCAGTGAT+AGG 0.433766 8:-47029191 None:intergenic
AGGTGCATTGAGCGACTATA+CGG 0.434703 8:+47032785 MsaT043504.1:CDS
TCCTGACTTCTCCTTACTGC+CGG 0.434924 8:-47044544 None:intergenic
AGACCAGATACGTCCACAAA+TGG 0.436415 8:+47041578 MsaT043504.1:CDS
AGAGGAGAAGGACAGAGATC+GGG 0.438785 8:+47031838 MsaT043504.1:CDS
AGAAGGACAGAGATCGGGGC+AGG 0.439322 8:+47031843 MsaT043504.1:CDS
TTATGATAATGATGGTAATC+TGG 0.439352 8:+47029770 MsaT043504.1:CDS
AACCCGCCTGAAGCAGAAAC+AGG 0.442327 8:+47032874 MsaT043504.1:CDS
GACCAGATACGTCCACAAAT+GGG 0.442651 8:+47041579 MsaT043504.1:CDS
TGTTCGAATTAAAGAGTCTT+CGG 0.443828 8:-47045013 None:intergenic
GGAAGTCATGAAGGATTTCA+AGG 0.445678 8:+47028533 MsaT043504.1:CDS
TCTTCCTGTATCTCTGGATC+AGG 0.446613 8:-47038747 None:intergenic
AGGAAAGCCTATAAATGAAC+TGG 0.447937 8:+47031979 MsaT043504.1:CDS
GATATATAAACTTGTGAAGC+AGG 0.448769 8:+47042620 MsaT043504.1:CDS
TTCAGTGATGGCCCCATTTG+TGG 0.448807 8:-47041591 None:intergenic
AATCAAATTCTTGCAAAGAA+TGG 0.449605 8:+47039057 MsaT043504.1:CDS
AATTCCAAGTTAGGAAGAAT+AGG 0.450496 8:-47038717 None:intergenic
TACATTGTTCACAGTTAGAA+AGG 0.451321 8:-47032003 None:intergenic
TTCAGGCGGGTTAATATAAC+CGG 0.451385 8:-47032863 None:intergenic
ATGAAGAGGTCAAGAGATGA+TGG 0.451630 8:+47027585 MsaT043504.1:CDS
GGGATGATGGGGTGAAAGAA+AGG 0.451959 8:+47031864 MsaT043504.1:CDS
AGATAGGAGAGAACAGGAAA+GGG 0.452750 8:+47029737 MsaT043504.1:CDS
ACGGCCTATTCTTCCTAACT+TGG 0.452950 8:+47038713 MsaT043504.1:CDS
GCGCTTAAGACTGAAACTTT+GGG 0.453947 8:+47039137 MsaT043504.1:CDS
TGCAATGGTTCAGCAGTACC+AGG 0.455980 8:-47029837 None:intergenic
TGCAAAGAATGGCAAGCAAA+TGG 0.457694 8:+47039068 MsaT043504.1:CDS
TCCTCTTCAAAGTCTCCATT+CGG 0.458024 8:-47041689 None:intergenic
TAGAGGAGAAGGACAGAGAT+CGG 0.460034 8:+47031837 MsaT043504.1:CDS
TCAGAATCTTTGTGGAATGA+AGG 0.460335 8:+47031791 MsaT043504.1:intron
GAGATCGGGGCAGGGATGAT+GGG 0.462075 8:+47031852 MsaT043504.1:CDS
ATACGAATTGGAATATCTCC+TGG 0.466439 8:-47032616 None:intergenic
AGCATTCACCAACTGTTCAA+TGG 0.467677 8:-47039240 None:intergenic
AGAAATGTTTCAAAATGATA+AGG 0.468373 8:+47028491 MsaT043504.1:CDS
GCAAACATGAATAATGCATC+AGG 0.468600 8:+47039305 MsaT043504.1:CDS
CCAGTGATCATTCAATACTT+TGG 0.468887 8:-47032207 None:intergenic
GGTCTGGAGGCAGTGCATAA+AGG 0.470217 8:+47041737 MsaT043504.1:CDS
GCTAATGTCTCAATGTCCTC+TGG 0.470969 8:+47039260 MsaT043504.1:CDS
CATCTCAGGTTTGTGCAGTC+CGG 0.471614 8:+47030309 MsaT043504.1:intron
TGATGCCTTATCATATCTTA+AGG 0.474647 8:+47028461 MsaT043504.1:CDS
GTATCCTGATCCAGAGATAC+AGG 0.475159 8:+47038743 MsaT043504.1:CDS
GATGCGATGTCATCGTCATC+TGG 0.475208 8:-47045575 None:intergenic
TCCTTCTCCTCTACCTTCAG+TGG 0.475603 8:-47031827 None:intergenic
CCAAAGTATTGAATGATCAC+TGG 0.477541 8:+47032207 MsaT043504.1:CDS
TTGTTTAGAATTGATACAGC+TGG 0.479427 8:+47028661 MsaT043504.1:intron
CCTGACTTCTCCTTACTGCC+GGG 0.479450 8:-47044543 None:intergenic
ATCTGTTGTCCCCGGCAGTA+AGG 0.479876 8:+47044533 MsaT043504.1:CDS
TATTTAGATGCGAAGACGAC+AGG 0.484590 8:+47032300 MsaT043504.1:CDS
CGAGAAGAACATGAAGAGGA+TGG 0.486027 8:+47041944 MsaT043504.1:CDS
TTTGCAGTTTATGCAGATGC+TGG 0.487789 8:+47041716 MsaT043504.1:CDS
CACTGGGTTTCTGTAACGTC+AGG 0.493007 8:+47032224 MsaT043504.1:CDS
TGGAATTGGTGGGGTTAAAG+AGG 0.493101 8:+47039088 MsaT043504.1:CDS
CCTCTGTCAAGTTCTGGATC+AGG 0.493605 8:-47029651 None:intergenic
CAATGCCAGTAGTTCTTGTC+GGG 0.495214 8:-47030431 None:intergenic
AGATATTCCAATTCGTATTG+AGG 0.495294 8:+47032621 MsaT043504.1:CDS
ATATGATAAGGCATCATTTG+TGG 0.495956 8:-47028454 None:intergenic
AGTTTATGCAGATGCTGGTC+TGG 0.496457 8:+47041721 MsaT043504.1:CDS
GTGACACAATGCGAGAAGAA+TGG 0.496831 8:+47031306 MsaT043504.1:CDS
TTTCCCTGCTGTAGATATGC+AGG 0.497092 8:-47030402 None:intergenic
GAGTGAAGGAGCTGTTTAAA+GGG 0.499135 8:+47028695 MsaT043504.1:CDS
AGCTTTGGTGTCTTCAGTGA+TGG 0.501018 8:-47041603 None:intergenic
ATGTCGGCCCGGTGTTTCAT+GGG 0.503641 8:+47042098 MsaT043504.1:CDS
GCCAAGGGTGATAGTAGTCC+TGG 0.504432 8:+47038960 MsaT043504.1:CDS
TGGTCATGCATCAGTGGTAC+CGG 0.506362 8:+47045550 MsaT043504.1:CDS
AGATCATTCCATTGAACAGT+TGG 0.506563 8:+47039232 MsaT043504.1:CDS
TTCAAATGTGAAAGAGAAGA+AGG 0.506759 8:+47041656 MsaT043504.1:CDS
TCTGACCACCAGTCATCACT+TGG 0.507362 8:-47028425 None:intergenic
CTCCTGTTTCTGCTTCAGGC+GGG 0.509322 8:-47032876 None:intergenic
TACTGCCTTAAGATATGATA+AGG 0.510194 8:-47028466 None:intergenic
ATCCATCTCATCAGTGCCAC+TGG 0.510841 8:-47043936 None:intergenic
ATCGTAGAGAAGAAAGAGAT+AGG 0.510982 8:+47029721 MsaT043504.1:CDS
CCAATGCCAGTAGTTCTTGT+CGG 0.511039 8:-47030432 None:intergenic
CAGCTTCAAGCTGTTGCCAG+TGG 0.511513 8:+47043920 MsaT043504.1:intron
AGTGAAAATGCATCGGAGAA+TGG 0.511701 8:+47041878 MsaT043504.1:CDS
AGGAATAGAGACATCCTTGT+TGG 0.511750 8:-47031927 None:intergenic
ATGGGGTGAAAGAAAGGGAC+CGG 0.513192 8:+47031870 MsaT043504.1:CDS
AGACGTGAGGAACAAATTTG+TGG 0.513614 8:+47041794 MsaT043504.1:CDS
GATGGAGTACAAGTTATCAA+TGG 0.514043 8:+47044740 MsaT043504.1:CDS
GCCTGAAAACTCATCACTCC+TGG 0.514613 8:-47044708 None:intergenic
GGAATAAACTAAAATGTGCC+AGG 0.515082 8:+47044690 MsaT043504.1:intron
CTTCTTTCCCATGAAACACC+GGG 0.518406 8:-47042105 None:intergenic
TCTTCTTTCCCATGAAACAC+CGG 0.520998 8:-47042106 None:intergenic
CATACTAAATATGTATAGAA+AGG 0.521395 8:+47029160 MsaT043504.1:CDS
GAGAAGACGCGAGAGAGAAA+AGG 0.521575 8:+47029698 MsaT043504.1:CDS
TTATATGAACATTACCCTGC+AGG 0.523800 8:-47039169 None:intergenic
GTTATATTTCTAGTGAGGGA+GGG 0.524796 8:+47039511 MsaT043504.1:CDS
AGTGTGATTGCATATCCCTT+TGG 0.525262 8:-47028754 None:intergenic
AGGTGTGATGAGGACTGATA+AGG 0.525794 8:+47029671 MsaT043504.1:CDS
CAAGGATGTCTCTATTCCTA+AGG 0.527196 8:+47031931 MsaT043504.1:CDS
GCTAGCCAGAAAACTGAACT+TGG 0.527390 8:+47032182 MsaT043504.1:CDS
CCTGGTTATATTTCTAGTGA+GGG 0.527495 8:+47039507 MsaT043504.1:CDS
TGACCATGGGCTTGATGTGA+TGG 0.527747 8:+47032808 MsaT043504.1:CDS
CCCTCACTAGAAATATAACC+AGG 0.528722 8:-47039507 None:intergenic
GAGATAGGAGAGAACAGGAA+AGG 0.530794 8:+47029736 MsaT043504.1:CDS
AATCACCCGACAAGAACTAC+TGG 0.532046 8:+47030426 MsaT043504.1:CDS
GACGTGAGGAACAAATTTGT+GGG 0.532121 8:+47041795 MsaT043504.1:CDS
GGGCAAGCCCAAGTGATGAC+TGG 0.532479 8:+47028417 MsaT043504.1:CDS
CTAAGCAAGGACAAGTATGT+AGG 0.533833 8:+47031959 MsaT043504.1:CDS
GGATGATGGGGTGAAAGAAA+GGG 0.533971 8:+47031865 MsaT043504.1:CDS
CCTCCTGTTTCTGCTTCAGG+CGG 0.534175 8:-47032877 None:intergenic
TTCTCGAGAAGAACATGAAG+AGG 0.534313 8:+47041940 MsaT043504.1:CDS
GAAGGACAGAGATCGGGGCA+GGG 0.536380 8:+47031844 MsaT043504.1:CDS
GCCAATGATGTTGAAGGAGA+TGG 0.538398 8:+47042019 MsaT043504.1:CDS
ACCACTGAAGGTAGAGGAGA+AGG 0.538633 8:+47031826 MsaT043504.1:CDS
ACCAGGACTACTATCACCCT+TGG 0.539844 8:-47038961 None:intergenic
GATAGAGATTATGATAATGA+TGG 0.540499 8:+47029762 MsaT043504.1:CDS
CCCGGCAGTAAGGAGAAGTC+AGG 0.540618 8:+47044543 MsaT043504.1:CDS
GAGAAGAACATGAAGAGGAT+GGG 0.541076 8:+47041945 MsaT043504.1:CDS
TCCTAACTCGTCCGCTTGTG+AGG 0.541310 8:+47029887 MsaT043504.1:CDS
TGGCAAGCAAATGGAATTGG+TGG 0.541884 8:+47039077 MsaT043504.1:CDS
TTTGGGAAGTAGTACCCTGC+AGG 0.544117 8:+47039154 MsaT043504.1:CDS
TTCCTCACCATCAGCAGACT+CGG 0.547944 8:-47041915 None:intergenic
TGTCTCAATGTCCTCTGGAA+TGG 0.548435 8:+47039265 MsaT043504.1:CDS
ATCCTTGTTGGAAATTCCAG+TGG 0.549821 8:-47031915 None:intergenic
AGTGCCTGCATATCTACAGC+AGG 0.551399 8:+47030398 MsaT043504.1:CDS
CTGTCGTCTGATGATCTATG+AGG 0.551979 8:-47041857 None:intergenic
AAAGTCTGGTCATAGAGCTA+TGG 0.553178 8:+47029812 MsaT043504.1:CDS
CGCCCTGTGCTGTCTTCTAG+AGG 0.556451 8:+47027630 MsaT043504.1:CDS
TCTGGAATGGAGCAAAGTAA+TGG 0.557415 8:+47039278 MsaT043504.1:CDS
TTGGGTAGTAGACGGTAGCT+GGG 0.557563 8:-47032028 None:intergenic
TTAAGCCATACCTCTGATGA+AGG 0.558600 8:-47039543 None:intergenic
GACTTCCTATCTGTTGTCCC+CGG 0.559543 8:+47044525 MsaT043504.1:CDS
GCTGCAACTCCGTCTAGACC+TGG 0.559719 8:+47039489 MsaT043504.1:CDS
CCGACAAGAACTACTGGCAT+TGG 0.561491 8:+47030432 MsaT043504.1:CDS
TCCTAAGGTGTCTCTAAGCA+AGG 0.562914 8:+47031946 MsaT043504.1:CDS
TCCTTGCTTAGAGACACCTT+AGG 0.564554 8:-47031947 None:intergenic
CAAAGTATTGAATGATCACT+GGG 0.564712 8:+47032208 MsaT043504.1:CDS
AGATCGGGGCAGGGATGATG+GGG 0.564939 8:+47031853 MsaT043504.1:CDS
ACCTGGTTATATTTCTAGTG+AGG 0.565583 8:+47039506 MsaT043504.1:CDS
TTCTGTAACGTCAGGAAGTG+AGG 0.566117 8:+47032232 MsaT043504.1:CDS
TACTGCCGGGGACAACAGAT+AGG 0.566181 8:-47044530 None:intergenic
GAGCGACTATACGGTGACCA+TGG 0.568143 8:+47032794 MsaT043504.1:CDS
TCTTGATACTTTGTCAGGAA+CGG 0.569866 8:-47039198 None:intergenic
GCTGATGCCAATGATGTTGA+AGG 0.570675 8:+47042013 MsaT043504.1:CDS
TCTCTTTACAGTTTACTGGA+TGG 0.570712 8:+47042513 MsaT043504.1:CDS
CGAGAAAGAGACAAATCCAC+TGG 0.570760 8:+47031899 MsaT043504.1:CDS
GGCAAGCAAATGGAATTGGT+GGG 0.571393 8:+47039078 MsaT043504.1:CDS
CTTGTACTCCATCCATAACC+TGG 0.572632 8:-47044730 None:intergenic
TGCCAGTGGCACTGATGAGA+TGG 0.573700 8:+47043934 MsaT043504.1:CDS
AGCGACTATACGGTGACCAT+GGG 0.576626 8:+47032795 MsaT043504.1:CDS
CGAGAAGGAACACCAAGCAT+TGG 0.577115 8:-47038861 None:intergenic
GGTTATATTTCTAGTGAGGG+AGG 0.577472 8:+47039510 MsaT043504.1:CDS
AATTGCTTGCAATTCATCCA+AGG 0.578784 8:+47044775 MsaT043504.1:CDS
TTTGACAGACATTGTATGAG+AGG 0.579972 8:+47042296 MsaT043504.1:intron
GAAGCAGAAACAGGAGGAGT+GGG 0.580158 8:+47032883 MsaT043504.1:CDS
AGCTGTCACAAAGAATCAGT+TGG 0.580773 8:+47041629 MsaT043504.1:CDS
AAAATATATTAAACTCTGCA+CGG 0.581401 8:-47032913 None:intergenic
AGAAGAACATGAAGAGGATG+GGG 0.581876 8:+47041946 MsaT043504.1:CDS
ATGTCATCGTCATCTGGTGC+CGG 0.582908 8:-47045569 None:intergenic
TGAAGCAGAAACAGGAGGAG+TGG 0.583162 8:+47032882 MsaT043504.1:CDS
TCTCCTCTAGAAGACAGCAC+AGG 0.584618 8:-47027633 None:intergenic
GCTTGATTTACCTTCATCAG+AGG 0.585001 8:+47039533 MsaT043504.1:CDS
TGGTACAGCAAGTATTGCCA+AGG 0.587923 8:+47038944 MsaT043504.1:CDS
AGAGGCTGTTCATCATCCGA+TGG 0.590711 8:-47028778 None:intergenic
TCTGGTACCGAGTCTGCTGA+TGG 0.591394 8:+47041908 MsaT043504.1:CDS
AAGCGGACGAGTTAGGAAGA+AGG 0.593439 8:-47029881 None:intergenic
TCTGCTCTCTTCCAAGACCA+TGG 0.594674 8:+47029350 MsaT043504.1:CDS
TCGGGAACACGCAGTCGAGA+AGG 0.594770 8:-47038876 None:intergenic
GAAGGTGAATTATCTCCGAA+TGG 0.596872 8:+47041674 MsaT043504.1:CDS
AAAATATGCCGATATTATGG+AGG 0.596964 8:+47031269 MsaT043504.1:CDS
GCAGAAACCACTGAAGGTAG+AGG 0.597991 8:+47031820 MsaT043504.1:CDS
GAGGCAAATGCATGTTGACA+AGG 0.600129 8:+47029490 MsaT043504.1:CDS
GAGGAGAAGGACAGAGATCG+GGG 0.604735 8:+47031839 MsaT043504.1:CDS
AGACACAGAAGATGCTGTCA+AGG 0.605004 8:+47038899 MsaT043504.1:CDS
TCTCGTAAAATATGTCGGCC+CGG 0.605072 8:+47042087 MsaT043504.1:CDS
TTATGCAGATGCTGGTCTGG+AGG 0.607407 8:+47041724 MsaT043504.1:CDS
TGAAGGATTTCAAGGCCCAA+AGG 0.608405 8:+47028541 MsaT043504.1:CDS
TGCAACAAGTAAGAAAGTTG+AGG 0.611189 8:+47032561 MsaT043504.1:CDS
CTGACTTCTCCTTACTGCCG+GGG 0.611922 8:-47044542 None:intergenic
GAAATATAACCAGGTCTAGA+CGG 0.612423 8:-47039498 None:intergenic
CTCCTCTAGAAGACAGCACA+GGG 0.613383 8:-47027632 None:intergenic
GTTCCACTGATCGATATGCC+AGG 0.616174 8:+47042383 MsaT043504.1:CDS
GAGAGTGAAGGTGAAGCTGA+AGG 0.616292 8:+47041986 MsaT043504.1:CDS
GATAACAAGGTCGAGAGTGA+AGG 0.616403 8:+47041974 MsaT043504.1:CDS
TCCGAATGGAGACTTTGAAG+AGG 0.616933 8:+47041688 MsaT043504.1:CDS
ATTACTTTGCTCCATTCCAG+AGG 0.618672 8:-47039276 None:intergenic
ATATGCAATCACACTCCCAT+CGG 0.619892 8:+47028762 MsaT043504.1:CDS
TACCGAGTCTGCTGATGGTG+AGG 0.623596 8:+47041913 MsaT043504.1:CDS
GAGGCTGTTCATCATCCGAT+GGG 0.623704 8:-47028777 None:intergenic
AAGCCTCTCGTAAAATATGT+CGG 0.623749 8:+47042082 MsaT043504.1:CDS
GGTGATAGTAGTCCTGGTGT+TGG 0.626040 8:+47038966 MsaT043504.1:CDS
ACCAGATACGTCCACAAATG+GGG 0.627024 8:+47041580 MsaT043504.1:CDS
AGACGACAGTGAAAATGCAT+CGG 0.631225 8:+47041871 MsaT043504.1:CDS
TATATGAACATTACCCTGCA+GGG 0.631473 8:-47039168 None:intergenic
AACTTGACAGAGGTGTGATG+AGG 0.635887 8:+47029661 MsaT043504.1:CDS
CAAGCCCAAGTGATGACTGG+TGG 0.636585 8:+47028420 MsaT043504.1:CDS
TTGCCGAGCTCCTATCTCGA+AGG 0.637094 8:-47029457 None:intergenic
TGGTGTCATAGAAAGAGTGA+AGG 0.637201 8:+47028681 MsaT043504.1:CDS
CTCATCATGAAGAAGAACAC+GGG 0.637341 8:-47044038 None:intergenic
CAAATTTGTGGGGTAGCTGG+AGG 0.637415 8:+47041806 MsaT043504.1:CDS
CTGACCACCAGTCATCACTT+GGG 0.638468 8:-47028424 None:intergenic
TCTCCTTCGAGATAGGAGCT+CGG 0.641981 8:+47029454 MsaT043504.1:CDS
TTTCAGTCTTAAGCGCAGAA+CGG 0.642069 8:-47039130 None:intergenic
CAATTGCTGCTGGAAATAGA+CGG 0.645417 8:+47038694 MsaT043504.1:CDS
AAATATGCCGATATTATGGA+GGG 0.645886 8:+47031270 MsaT043504.1:CDS
GGTCATAGAGCTATGGACCC+TGG 0.645919 8:+47029819 MsaT043504.1:CDS
GCAAGCAAATGGAATTGGTG+GGG 0.646990 8:+47039079 MsaT043504.1:CDS
GCGGGTTAATATAACCGGCA+AGG 0.647398 8:-47032858 None:intergenic
TGAAGGTGAAGCTGAAGGAA+TGG 0.649727 8:+47041991 MsaT043504.1:CDS
CTTTGTGGAATGAAGGACAT+GGG 0.653227 8:+47031798 MsaT043504.1:CDS
ATTGTATGAGAGGATACGAT+CGG 0.653638 8:+47042306 MsaT043504.1:CDS
TTGGGAAGTAGTACCCTGCA+GGG 0.654206 8:+47039155 MsaT043504.1:CDS
CGTCCATCACATCAAGCCCA+TGG 0.654496 8:-47032811 None:intergenic
CAACTCATAAAATATTCATG+TGG 0.654673 8:+47038777 MsaT043504.1:CDS
ATTATGGTAGCACCAACACC+AGG 0.656091 8:-47038978 None:intergenic
GGATGGGGATCATGATAACA+AGG 0.658299 8:+47041961 MsaT043504.1:CDS
GAGCTCCTATCTCGAAGGAG+AGG 0.658766 8:-47029452 None:intergenic
GAAAATGACGATGAAAGTGA+CGG 0.663456 8:+47041830 MsaT043504.1:CDS
GTGCCTGCATATCTACAGCA+GGG 0.665150 8:+47030399 MsaT043504.1:CDS
TCTTTGTGGAATGAAGGACA+TGG 0.666118 8:+47031797 MsaT043504.1:CDS
ACTCCTCGAGAAGATCTCCA+TGG 0.668088 8:-47029367 None:intergenic
TCTCATCATGAAGAAGAACA+CGG 0.671451 8:-47044039 None:intergenic
TTACCTGGCATATCGATCAG+TGG 0.673060 8:-47042386 None:intergenic
ACACTACCAAAATAGACGTG+AGG 0.681050 8:+47041781 MsaT043504.1:CDS
TATCACTGCAGTTTACCAAG+AGG 0.685018 8:+47029193 MsaT043504.1:CDS
AACTGAATAGACAATCGAGT+AGG 0.685623 8:-47044426 None:intergenic
TGGGGTGAAAGAAAGGGACC+GGG 0.689838 8:+47031871 MsaT043504.1:CDS
GCAATGGTTCAGCAGTACCA+GGG 0.691835 8:-47029836 None:intergenic
GGAGCTCGGCAATGACAACA+GGG 0.691986 8:+47029468 MsaT043504.1:CDS
ACATGGGCAGAAACCACTGA+AGG 0.697008 8:+47031814 MsaT043504.1:CDS
GCGCTCTGAGTATGGCAGTG+AGG 0.697520 8:-47042044 None:intergenic
CCGCCTGAAGCAGAAACAGG+AGG 0.700575 8:+47032877 MsaT043504.1:CDS
AGACCATGGAGATCTTCTCG+AGG 0.704422 8:+47029364 MsaT043504.1:CDS
GGTACAGCAAGTATTGCCAA+GGG 0.705218 8:+47038945 MsaT043504.1:CDS
ACGTGAGGAACAAATTTGTG+GGG 0.707443 8:+47041796 MsaT043504.1:CDS
ATCCACTGGAATTTCCAACA+AGG 0.712645 8:+47031913 MsaT043504.1:CDS
ATGCATGACCAAAATTACTG+AGG 0.717718 8:-47045538 None:intergenic
CCTGATCCAGAACTTGACAG+AGG 0.733919 8:+47029651 MsaT043504.1:CDS
GCTCGGCAATGACAACAGGG+AGG 0.773482 8:+47029471 MsaT043504.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 47027585 47045601 47027585 ID=MsaG043504
Chr8 mRNA 47027585 47045601 47027585 ID=MsaT043504.1;Parent=MsaG043504
Chr8 exon 47027585 47027658 47027585 ID=MsaT043504.1.exon1;Parent=MsaT043504.1
Chr8 CDS 47027585 47027658 47027585 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47028413 47028562 47028413 ID=MsaT043504.1.exon2;Parent=MsaT043504.1
Chr8 CDS 47028413 47028562 47028413 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47028669 47028855 47028669 ID=MsaT043504.1.exon3;Parent=MsaT043504.1
Chr8 CDS 47028669 47028855 47028669 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47029116 47029214 47029116 ID=MsaT043504.1.exon4;Parent=MsaT043504.1
Chr8 CDS 47029116 47029214 47029116 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47029347 47029511 47029347 ID=MsaT043504.1.exon5;Parent=MsaT043504.1
Chr8 CDS 47029347 47029511 47029347 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47029600 47029927 47029600 ID=MsaT043504.1.exon6;Parent=MsaT043504.1
Chr8 CDS 47029600 47029927 47029600 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47030317 47030453 47030317 ID=MsaT043504.1.exon7;Parent=MsaT043504.1
Chr8 CDS 47030317 47030453 47030317 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47031252 47031327 47031252 ID=MsaT043504.1.exon8;Parent=MsaT043504.1
Chr8 CDS 47031252 47031327 47031252 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47031621 47031650 47031621 ID=MsaT043504.1.exon9;Parent=MsaT043504.1
Chr8 CDS 47031621 47031650 47031621 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47031795 47032054 47031795 ID=MsaT043504.1.exon10;Parent=MsaT043504.1
Chr8 CDS 47031795 47032054 47031795 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47032167 47032321 47032167 ID=MsaT043504.1.exon11;Parent=MsaT043504.1
Chr8 CDS 47032167 47032321 47032167 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47032528 47032655 47032528 ID=MsaT043504.1.exon12;Parent=MsaT043504.1
Chr8 CDS 47032528 47032655 47032528 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47032774 47033028 47032774 ID=MsaT043504.1.exon13;Parent=MsaT043504.1
Chr8 CDS 47032774 47033028 47032774 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47038631 47039326 47038631 ID=MsaT043504.1.exon14;Parent=MsaT043504.1
Chr8 CDS 47038631 47039326 47038631 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47039484 47039554 47039484 ID=MsaT043504.1.exon15;Parent=MsaT043504.1
Chr8 CDS 47039484 47039554 47039484 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47041563 47042186 47041563 ID=MsaT043504.1.exon16;Parent=MsaT043504.1
Chr8 CDS 47041563 47042186 47041563 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47042304 47042404 47042304 ID=MsaT043504.1.exon17;Parent=MsaT043504.1
Chr8 CDS 47042304 47042404 47042304 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47042503 47042641 47042503 ID=MsaT043504.1.exon18;Parent=MsaT043504.1
Chr8 CDS 47042503 47042641 47042503 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47043923 47044081 47043923 ID=MsaT043504.1.exon19;Parent=MsaT043504.1
Chr8 CDS 47043923 47044081 47043923 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47044423 47044580 47044423 ID=MsaT043504.1.exon20;Parent=MsaT043504.1
Chr8 CDS 47044423 47044580 47044423 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47044691 47044796 47044691 ID=MsaT043504.1.exon21;Parent=MsaT043504.1
Chr8 CDS 47044691 47044796 47044691 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47044994 47045088 47044994 ID=MsaT043504.1.exon22;Parent=MsaT043504.1
Chr8 CDS 47044994 47045088 47044994 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Chr8 exon 47045529 47045601 47045529 ID=MsaT043504.1.exon23;Parent=MsaT043504.1
Chr8 CDS 47045529 47045601 47045529 ID=cds.MsaT043504.1;Parent=MsaT043504.1
Gene Sequence

>MsaT043504.1

ATGAAGAGGTCAAGAGATGATGGTTACATGAGTTCACAGCTCAAACGCCCTGTGCTGTCTTCTAGAGGAGAACCTTCGGGGCAAGCCCAAGTGATGACTGGTGGTCAGAAGTTAACCACAAATGATGCCTTATCATATCTTAAGGCAGTAAGAGAAATGTTTCAAAATGATAAGGAAAAATACGATGAATTTTTGGAAGTCATGAAGGATTTCAAGGCCCAAAGAATTGATACAGCTGGTGTCATAGAAAGAGTGAAGGAGCTGTTTAAAGGGCATAAAGATTTGATTTTGGGATTTAACACCTTTTTGCCAAAGGGATATGCAATCACACTCCCATCGGATGATGAACAGCCTCTACAAAAGAAGCCTGTTGAATTTGAAGAAGCTATAAATTTTGTGGGCAAGATTAAGAATCGTTTTCAAGGCAACGATCGCGTGTATAAGACTTTTTTAGACATACTAAATATGTATAGAAAGGAACTCAAGCCTATCACTGCAGTTTACCAAGAGGTTTCTGCTCTCTTCCAAGACCATGGAGATCTTCTCGAGGAGTTTACTCATTTTCTTCCTGATACTTCAGGAGCAGCTGCTGCACATTTTGCTTCTGCTCGTAATCCTCTCCTTCGAGATAGGAGCTCGGCAATGACAACAGGGAGGCAAATGCATGTTGACAAGAGAGAAAAGACAACAACTTTGCATGCTGATCGCGATCTCAGCGTTGATCATCCTGATCCAGAACTTGACAGAGGTGTGATGAGGACTGATAAGGAGCAGAGAAGACGCGAGAGAGAAAAGGATCGTAGAGAAGAAAGAGATAGGAGAGAACAGGAAAGGGATGATAGAGATTATGATAATGATGGTAATCTGGAGCGTTTATCCCACAAGAAAAAGTCTGGTCATAGAGCTATGGACCCTGGTACTGCTGAACCATTGCATGATGCAGATGAAAAGCTCGACCTTCTTCCTAACTCGTCCGCTTGTGAGGATAAAAGTTCTTTGAAAAGTTTGTGCAGTCCGGTGCTTGCTTTCCTTGAAAAAGTCAAGGAGAAGTTAAAAAATCCTGATGATTACCAGGAATTTTTGAAGTGCCTGCATATCTACAGCAGGGAAATAATCACCCGACAAGAACTACTGGCATTGGTGGGTGATTTACTGGGAAAATATGCCGATATTATGGAGGGATTTGATGATTTTGTGACACAATGCGAGAAGAATGAAGGATTCCTTGCTGGTGTCATGAATAAAAAATCTTTGTGGAATGAAGGACATGGGCAGAAACCACTGAAGGTAGAGGAGAAGGACAGAGATCGGGGCAGGGATGATGGGGTGAAAGAAAGGGACCGGGAACTCCGAGAAAGAGACAAATCCACTGGAATTTCCAACAAGGATGTCTCTATTCCTAAGGTGTCTCTAAGCAAGGACAAGTATGTAGGAAAGCCTATAAATGAACTGGACCTTTCTAACTGTGAACAATGTACTCCCAGCTACCGTCTACTACCCAAAAATTACCCAATACCATTAGCTAGCCAGAAAACTGAACTTGGCGCCAAAGTATTGAATGATCACTGGGTTTCTGTAACGTCAGGAAGTGAGGATTATTCCTTTAAACACATGCGCAAAAATCAGTATGAAGAGAGCTTATTTAGATGCGAAGACGACAGGTTTGAACTTGATATGTTGTTAGAGTCTATAAATGCAACAAGTAAGAAAGTTGAGGAGATCATAGAAAAAGTTAATGATGATGTAATTCCAGGAGATATTCCAATTCGTATTGAGGAGCATTTATCAGCTCTAAATCTTAGGTGCATTGAGCGACTATACGGTGACCATGGGCTTGATGTGATGGACGTGTTGAAAAAGAATGCATCTCTAGCCTTGCCGGTTATATTAACCCGCCTGAAGCAGAAACAGGAGGAGTGGGCAAGATGCCGTGCAGAGTTTAATATATTTTGGGCTGATGTATATGCGAAGAATTATCATAAATCACTTGATCATCGAAGCTTTTACTTTAAGCAGCAGGACACAAAAAGCTTGAGCACTAAAGCCTTATTGGGAGAGATCAAAGAAATTAGCGAGAAGAAACGAAAAGAAGATGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGGCCTATTCTTCCTAACTTGGAATTTGAGTATCCTGATCCAGAGATACAGGAAGATTTGTACCAACTCATAAAATATTCATGTGGAGAAGTTTGTACAACCGAACAATTGGATAAAGTGATGAAGATTTGGACAACATTTTTAGAACCAATGCTTGGTGTTCCTTCTCGACTGCGTGTTCCCGAAGACACAGAAGATGCTGTCAAGGCCCAGAAAGATTCTGCAAAAACTGGTACAGCAAGTATTGCCAAGGGTGATAGTAGTCCTGGTGTTGGTGCTACCATAATGAATCTTAAGAGTTCAAACCCTAATAGAAATGGAGATGCTAGTGTTCCATTTGAACAATCAAATTCTTGCAAAGAATGGCAAGCAAATGGAATTGGTGGGGTTAAAGAGGATAATTGTCTCAAATCAGACCGTTCTGCGCTTAAGACTGAAACTTTGGGAAGTAGTACCCTGCAGGGTAATGTTCATATAAGTGCATCCGTTCCTGACAAAGTATCAAGAGTCAATAAGCAAGATCATTCCATTGAACAGTTGGTGAATGCTAATGTCTCAATGTCCTCTGGAATGGAGCAAAGTAATGGAAGAGCAAACATGAATAATGCATCAGGATTTGCTGCAACTCCGTCTAGACCTGGTTATATTTCTAGTGAGGGAGGGCTTGATTTACCTTCATCAGAGGGTGCTGATTCTACAAGACCAGATACGTCCACAAATGGGGCCATCACTGAAGACACCAAAGCTCACAGCTGTCACAAAGAATCAGTTGGACACTTCAAATGTGAAAGAGAAGAAGGTGAATTATCTCCGAATGGAGACTTTGAAGAGGATAACTTTGCAGTTTATGCAGATGCTGGTCTGGAGGCAGTGCATAAAGGAAAAGATTGTAATACCAGTCAACACTACCAAAATAGACGTGAGGAACAAATTTGTGGGGTAGCTGGAGGTGAAAATGACGATGAAAGTGACGGAAGTCCTCATAGATCATCAGACGACAGTGAAAATGCATCGGAGAATGGTGATGTTTCTGGTACCGAGTCTGCTGATGGTGAGGAATGTTCTCGAGAAGAACATGAAGAGGATGGGGATCATGATAACAAGGTCGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCAATGATGTTGAAGGAGATGGAGCCTCACTGCCATACTCAGAGCGCTTTCTTCTTACTGTAAAGCCTCTCGTAAAATATGTCGGCCCGGTGTTTCATGGGAAAGAAGAGAATGTTAAAATTTTTTACGGAAATGATTCCTTTTATGTGCTGTTTAGACTTCATCAGACATTGTATGAGAGGATACGATCGGCAAAGATTAACTCATCTTCTGCTGAAAAGAAATGGAGAGCTTCAAATGATACAAGTTCCACTGATCGATATGCCAGGTTCATGAATTCTCTTTACAGTTTACTGGATGGTTCTTCTGATAATTCAAAATTTGAAGATGACTGTCGAGCTATTATTGGAACTCAGTCATATGTCTTGTTCACGTTAGACAAGCTGATATATAAACTTGTGAAGCAGCTTCAAGCTGTTGCCAGTGGCACTGATGAGATGGATAATAAACTTCTTCAACTATATGCATATGAACAATCAAGAAAATCTGGAAGCTTTTTTGATATAGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATGTTCACCTACTCGATTGTCTATTCAGTTGATGGACTATGGACATGATAAGCCAGAAGTGACTGCTGTGTCAATAGATCCTAATTTTTCAACCTATTTGCACAATGACTTCCTATCTGTTGTCCCCGGCAGTAAGGAGAAGTCAGGAATTTTCTTAAAAAGGAATAAACTAAAATGTGCCAGGAGTGATGAGTTTTCAGGCCAGGTTATGGATGGAGTACAAGTTATCAATGGTTTGGAGTGTAAAATTGCTTGCAATTCATCCAAGGTTTCATATGTTTTAGATACCGAAGACTCTTTAATTCGAACAAAAAGGAAAAGGGGAAGTTTGCATCAGAACAATTCATATTGTGAACAGACAATTTTTGTTGTCCTCAGTAATTTTGGTCATGCATCAGTGGTACCGGCACCAGATGACGATGACATCGCATCCTAG
Protein sequence

>MsaT043504.1

MKRSRDDGYMSSQLKRPVLSSRGEPSGQAQVMTGGQKLTTNDALSYLKAVREMFQNDKEKYDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSDDEQPLQKKPVEFEEAINFVGKIKNRFQGNDRVYKTFLDILNMYRKELKPITAVYQEVSALFQDHGDLLEEFTHFLPDTSGAAAAHFASARNPLLRDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRREQERDDRDYDNDGNLERLSHKKKSGHRAMDPGTAEPLHDADEKLDLLPNSSACEDKSSLKSLCSPVLAFLEKVKEKLKNPDDYQEFLKCLHIYSREIITRQELLALVGDLLGKYADIMEGFDDFVTQCEKNEGFLAGVMNKKSLWNEGHGQKPLKVEEKDRDRGRDDGVKERDRELRERDKSTGISNKDVSIPKVSLSKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESINATSKKVEEIIEKVNDDVIPGDIPIRIEEHLSALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQEEWARCRAEFNIFWADVYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEKKRKEDDVLLAIAAGNRRPILPNLEFEYPDPEIQEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSRLRVPEDTEDAVKAQKDSAKTGTASIAKGDSSPGVGATIMNLKSSNPNRNGDASVPFEQSNSCKEWQANGIGGVKEDNCLKSDRSALKTETLGSSTLQGNVHISASVPDKVSRVNKQDHSIEQLVNANVSMSSGMEQSNGRANMNNASGFAATPSRPGYISSEGGLDLPSSEGADSTRPDTSTNGAITEDTKAHSCHKESVGHFKCEREEGELSPNGDFEEDNFAVYADAGLEAVHKGKDCNTSQHYQNRREEQICGVAGGENDDESDGSPHRSSDDSENASENGDVSGTESADGEECSREEHEEDGDHDNKVESEGEAEGMADANDVEGDGASLPYSERFLLTVKPLVKYVGPVFHGKEENVKIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSSTDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVASGTDEMDNKLLQLYAYEQSRKSGSFFDIVYHENARVLLHDENIYRIECSPTRLSIQLMDYGHDKPEVTAVSIDPNFSTYLHNDFLSVVPGSKEKSGIFLKRNKLKCARSDEFSGQVMDGVQVINGLECKIACNSSKVSYVLDTEDSLIRTKRKRGSLHQNNSYCEQTIFVVLSNFGHASVVPAPDDDDIAS*