AlfalfaGEDB | MsaG043777

M. sativa ssp. caerulea / MsaG043777

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006355 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903311 GO:1903313 GO:1903506 GO:2000112 GO:2000113 GO:2001141
PFAM: PF00642.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043777	XP_003628788.1	94.215	363	18	2	1	362	1	361	0.0	689

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043777	sp\|Q9LQM3\|C3H12_ARATH	58.708	356	116	10	7	345	10	351	1.93e-104	325

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043777	tr\|G7LH15\|G7LH15_MEDTR	94.215	363	18	2	1	362	1	361	0.0	689

TFs/TRs:

Gene ID	Type	Classification
MsaG043777	TF	C3H

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000083	MsaG043777	0.833132	1.152049e-55	3.651114e-53
MsaG000113	MsaG043777	0.830559	4.937358e-55	1.451863e-52
MsaG000151	MsaG043777	0.802158	1.075336e-48	1.526697e-46
MsaG000292	MsaG043777	0.801008	1.845769e-48	2.553025e-46
MsaG000490	MsaG043777	0.802291	1.009966e-48	1.438312e-46
MsaG000643	MsaG043777	0.801967	1.176791e-48	1.663493e-46
MsaG000940	MsaG043777	0.806070	1.665103e-49	2.588348e-47
MsaG001038	MsaG043777	0.801225	1.667292e-48	2.317463e-46
MsaG001157	MsaG043777	0.800756	2.077089e-48	2.856745e-46
MsaG001323	MsaG043777	0.826219	5.441256e-54	1.415729e-51
MsaG001335	MsaG043777	0.803904	4.703078e-49	6.951033e-47
MsaG001835	MsaG043777	0.813497	4.281557e-51	7.969839e-49
MsaG001861	MsaG043777	0.808925	4.156223e-50	6.916056e-48
MsaG002008	MsaG043777	0.801514	1.456146e-48	2.037302e-46
MsaG002681	MsaG043777	0.812500	7.064653e-51	1.282766e-48
MsaG002815	MsaG043777	0.822133	4.909477e-53	1.142605e-50
MsaG002878	MsaG043777	0.803687	5.212950e-49	7.666250e-47
MsaG003072	MsaG043777	0.819889	1.603925e-52	3.517209e-50
MsaG003140	MsaG043777	0.802405	9.573832e-49	1.366994e-46
MsaG003311	MsaG043777	0.803061	7.018742e-49	1.017342e-46
MsaG003537	MsaG043777	0.800202	2.689945e-48	3.653528e-46
MsaG003589	MsaG043777	0.804464	3.600688e-49	5.391291e-47
MsaG003792	MsaG043777	0.804532	3.484775e-49	5.226082e-47
MsaG003810	MsaG043777	0.809402	3.288260e-50	5.534842e-48
MsaG003815	MsaG043777	0.803787	4.972040e-49	7.328806e-47
MsaG003859	MsaG043777	0.808457	5.226307e-50	8.599005e-48
MsaG003972	MsaG043777	0.818507	3.299867e-52	6.978286e-50
MsaG003973	MsaG043777	0.804072	4.340328e-49	6.440402e-47
MsaG004391	MsaG043777	0.836045	2.152082e-56	7.437789e-54
MsaG004552	MsaG043777	0.806770	1.187720e-49	1.877077e-47
MsaG004746	MsaG043777	0.812547	6.902250e-51	1.254730e-48
MsaG005294	MsaG043777	0.816445	9.564962e-52	1.918055e-49
MsaG006013	MsaG043777	0.823731	2.090809e-53	5.080910e-51
MsaG006250	MsaG043777	0.804886	2.942165e-49	4.448735e-47
MsaG006254	MsaG043777	0.800224	2.662546e-48	3.618129e-46
MsaG006480	MsaG043777	0.808530	5.042920e-50	8.312001e-48
MsaG006612	MsaG043777	0.807035	1.044252e-49	1.660642e-47
MsaG006679	MsaG043777	0.804183	4.116122e-49	6.123270e-47
MsaG006681	MsaG043777	0.823604	2.238159e-53	5.420415e-51
MsaG006763	MsaG043777	0.800054	2.882744e-48	3.902460e-46
MsaG006857	MsaG043777	0.810009	2.438049e-50	4.164424e-48
MsaG006841	MsaG043777	0.821171	8.171579e-53	1.853848e-50
MsaG006962	MsaG043777	0.805169	2.568966e-49	3.910147e-47
MsaG007117	MsaG043777	0.812746	6.245964e-51	1.141036e-48
MsaG007426	MsaG043777	0.818082	4.113969e-52	8.604877e-50
MsaG007658	MsaG043777	0.811517	1.154211e-50	2.045496e-48
MsaG008005	MsaG043777	0.807614	7.882738e-50	1.270947e-47
MsaG008113	MsaG043777	0.807937	6.736499e-50	1.094639e-47
MsaG008704	MsaG043777	0.815647	1.438876e-51	2.827505e-49
MsaG009140	MsaG043777	0.813849	3.585562e-51	6.733665e-49
MsaG010098	MsaG043777	0.806778	1.182766e-49	1.869628e-47
MsaG010572	MsaG043777	0.801005	1.848437e-48	2.556542e-46
MsaG011144	MsaG043777	0.800748	2.085493e-48	2.867764e-46
MsaG011257	MsaG043777	0.801185	1.698891e-48	2.359271e-46
MsaG011819	MsaG043777	0.802535	9.001249e-49	1.289080e-46
MsaG011881	MsaG043777	0.816672	8.511567e-52	1.716772e-49
MsaG011983	MsaG043777	0.813783	3.706816e-51	6.950012e-49
MsaG012118	MsaG043777	0.802732	8.200826e-49	1.179703e-46
MsaG012130	MsaG043777	0.817594	5.294318e-52	1.093524e-49
MsaG012141	MsaG043777	0.802224	1.042536e-48	1.482361e-46
MsaG012262	MsaG043777	0.806373	1.439097e-49	2.253138e-47
MsaG012339	MsaG043777	0.818961	2.604836e-52	5.574439e-50
MsaG012291	MsaG043777	0.808548	4.998020e-50	8.241582e-48
MsaG012297	MsaG043777	0.812272	7.918476e-51	1.429596e-48
MsaG012302	MsaG043777	0.803756	5.046316e-49	7.432924e-47
MsaG012594	MsaG043777	0.806957	1.084914e-49	1.722089e-47
MsaG012575	MsaG043777	0.812212	8.160093e-51	1.471023e-48
MsaG041942	MsaG043777	0.807149	9.881581e-50	1.575679e-47
MsaG041990	MsaG043777	0.805487	2.205470e-49	3.381545e-47
MsaG042686	MsaG043777	0.800046	2.894074e-48	3.916974e-46
MsaG042711	MsaG043777	0.804217	4.050699e-49	6.030749e-47
MsaG043777	MsaG043880	0.821252	7.830976e-53	1.780341e-50
MsaG043777	MsaG044018	0.813924	3.452424e-51	6.495838e-49
MsaG043777	MsaG044566	0.804421	3.674716e-49	5.496769e-47
MsaG043777	MsaG044886	0.813499	4.278009e-51	7.963486e-49
MsaG043777	MsaG045416	0.810221	2.195670e-50	3.769742e-48
MsaG043777	MsaG045492	0.810354	2.056343e-50	3.542131e-48
MsaG043777	MsaG045870	0.812095	8.653819e-51	1.555484e-48
MsaG043777	MsaG046281	0.834000	7.012150e-56	2.279546e-53
MsaG043777	MsaG046289	0.825279	9.075105e-54	2.300370e-51
MsaG043777	MsaG046329	0.815594	1.478554e-51	2.901479e-49
MsaG043777	MsaG046308	0.806365	1.444486e-49	2.261162e-47
MsaG043777	MsaG046321	0.825227	9.332802e-54	2.362348e-51
MsaG043777	MsaG046598	0.809225	3.586824e-50	6.011465e-48
MsaG043777	MsaG046700	0.810621	1.801472e-50	3.123364e-48
MsaG043777	MsaG047030	0.805232	2.492129e-49	3.798677e-47
MsaG043777	MsaG000632	0.801414	1.526380e-48	2.130738e-46
MsaG043777	MsaG004516	0.812834	5.977584e-51	1.094388e-48
MsaG043777	MsaG008721	0.833930	7.298602e-56	2.367793e-53
MsaG043777	MsaG013105	0.811952	9.294436e-51	1.664887e-48
MsaG043777	MsaG012253	0.802239	1.034943e-48	1.472083e-46
MsaG043777	MsaG013316	0.810296	2.115576e-50	3.638962e-48
MsaG043777	MsaG013067	0.805919	1.790920e-49	2.773967e-47
MsaG043777	MsaG018328	0.822137	4.898026e-53	1.140087e-50
MsaG043777	MsaG018951	0.809431	3.240564e-50	5.458610e-48
MsaG043777	MsaG031743	0.814064	3.216594e-51	6.073224e-49
MsaG043777	MsaG033142	0.800049	2.889690e-48	3.911377e-46
MsaG043777	MsaG032466	0.807793	7.224386e-50	1.169854e-47
MsaG043777	MsaG033379	0.820870	9.578017e-53	2.155593e-50
MsaG043777	MsaG034539	0.810143	2.282096e-50	3.910690e-48
MsaG043777	MsaG033622	0.804479	3.573732e-49	5.352916e-47
MsaG043777	MsaG037840	0.816932	7.446239e-52	1.512071e-49
MsaG043777	MsaG039794	0.810307	2.104170e-50	3.620346e-48
MsaG043777	MsaG038282	0.827599	2.556354e-54	6.912530e-52
MsaG043777	MsaG042294	0.801622	1.383901e-48	1.940989e-46
MsaG013189	MsaG043777	0.801919	1.203573e-48	1.699528e-46
MsaG013324	MsaG043777	0.812455	7.226367e-51	1.310630e-48
MsaG015317	MsaG043777	0.819474	1.993644e-52	4.324187e-50
MsaG015447	MsaG043777	0.812914	5.740098e-51	1.053032e-48
MsaG015852	MsaG043777	0.815246	1.765080e-51	3.433460e-49
MsaG016250	MsaG043777	0.812500	7.064653e-51	1.282766e-48
MsaG016370	MsaG043777	0.804235	4.016197e-49	5.981859e-47
MsaG016377	MsaG043777	0.802549	8.940466e-49	1.280790e-46
MsaG016796	MsaG043777	0.807650	7.746157e-50	1.250013e-47
MsaG017087	MsaG043777	0.800040	2.901885e-48	3.927074e-46
MsaG017348	MsaG043777	0.831196	3.452202e-55	1.033881e-52
MsaG017459	MsaG043777	0.827301	3.010244e-54	8.072070e-52
MsaG017713	MsaG043777	0.822921	3.225759e-53	7.668747e-51
MsaG018074	MsaG043777	0.810425	1.984700e-50	3.424716e-48
MsaG018083	MsaG043777	0.814434	2.666923e-51	5.082518e-49
MsaG018355	MsaG043777	0.800114	2.803466e-48	3.800169e-46
MsaG018502	MsaG043777	0.831346	3.172135e-55	9.541831e-53
MsaG018670	MsaG043777	0.803424	5.908448e-49	8.636185e-47
MsaG020469	MsaG043777	0.816382	9.880549e-52	1.978162e-49
MsaG020648	MsaG043777	0.837796	7.723970e-57	2.815115e-54
MsaG021053	MsaG043777	0.817747	4.891315e-52	1.014269e-49
MsaG021087	MsaG043777	0.836981	1.246132e-56	4.429935e-54
MsaG021108	MsaG043777	0.811603	1.106235e-50	1.964603e-48
MsaG021223	MsaG043777	0.803802	4.936456e-49	7.278883e-47
MsaG021293	MsaG043777	0.801030	1.826996e-48	2.528308e-46
MsaG021410	MsaG043777	0.805231	2.493415e-49	3.800548e-47
MsaG022193	MsaG043777	0.801324	1.592288e-48	2.218212e-46
MsaG022215	MsaG043777	0.811388	1.230865e-50	2.174487e-48
MsaG022362	MsaG043777	0.802733	8.197905e-49	1.179306e-46
MsaG023249	MsaG043777	0.808418	5.326834e-50	8.756138e-48
MsaG023645	MsaG043777	0.818900	2.689806e-52	5.746805e-50
MsaG023967	MsaG043777	0.812680	6.456746e-51	1.177592e-48
MsaG024116	MsaG043777	0.807969	6.632682e-50	1.078563e-47
MsaG024262	MsaG043777	0.815803	1.328483e-51	2.620844e-49
MsaG024313	MsaG043777	0.801216	1.674700e-48	2.327229e-46
MsaG024535	MsaG043777	0.806559	1.314961e-49	2.067879e-47
MsaG024573	MsaG043777	0.815650	1.436867e-51	2.823738e-49
MsaG025283	MsaG043777	0.807791	7.231919e-50	1.171014e-47
MsaG025326	MsaG043777	0.807963	6.650235e-50	1.081283e-47
MsaG026614	MsaG043777	0.827273	3.057342e-54	8.192003e-52
MsaG026641	MsaG043777	0.820859	9.636894e-53	2.168127e-50
MsaG027414	MsaG043777	0.803912	4.684157e-49	6.924493e-47
MsaG027829	MsaG043777	0.800727	2.105745e-48	2.894288e-46
MsaG027991	MsaG043777	0.806086	1.652704e-49	2.570017e-47
MsaG028195	MsaG043777	0.816191	1.089341e-51	2.170387e-49
MsaG028303	MsaG043777	0.800443	2.404731e-48	3.284069e-46
MsaG028435	MsaG043777	0.819333	2.145626e-52	4.636913e-50
MsaG028436	MsaG043777	0.816189	1.090362e-51	2.172331e-49
MsaG028513	MsaG043777	0.816519	9.210538e-52	1.850460e-49
MsaG028590	MsaG043777	0.825416	8.425361e-54	2.143699e-51
MsaG028683	MsaG043777	0.817925	4.460989e-52	9.293234e-50
MsaG028686	MsaG043777	0.801845	1.246438e-48	1.757084e-46
MsaG028742	MsaG043777	0.802891	7.605546e-49	1.098092e-46
MsaG029044	MsaG043777	0.801204	1.684548e-48	2.340293e-46
MsaG029381	MsaG043777	0.805537	2.152728e-49	3.304565e-47
MsaG029835	MsaG043777	0.802406	9.566989e-49	1.366058e-46
MsaG029894	MsaG043777	0.822619	3.790702e-53	8.938465e-51
MsaG030046	MsaG043777	0.823039	3.028842e-53	7.223662e-51
MsaG030578	MsaG043777	0.813789	3.694691e-51	6.928401e-49
MsaG030781	MsaG043777	0.813423	4.445446e-51	8.259702e-49
MsaG031154	MsaG043777	0.800084	2.843278e-48	3.851526e-46
MsaG031531	MsaG043777	0.813221	4.919998e-51	9.095438e-49
MsaG031645	MsaG043777	0.803860	4.800820e-49	7.088451e-47
MsaG031686	MsaG043777	0.812804	6.067314e-51	1.109995e-48
MsaG032764	MsaG043777	0.807064	1.029960e-49	1.639007e-47
MsaG035414	MsaG043777	0.802645	8.545567e-49	1.226880e-46
MsaG035496	MsaG043777	0.800559	2.277662e-48	3.118695e-46
MsaG035456	MsaG043777	0.805852	1.849810e-49	2.860684e-47
MsaG035775	MsaG043777	0.820258	1.321819e-52	2.927273e-50
MsaG039649	MsaG043777	0.803634	5.347254e-49	7.853879e-47
MsaG040264	MsaG043777	0.816533	9.141992e-52	1.837400e-49
MsaG040265	MsaG043777	0.813393	4.511837e-51	8.376795e-49
MsaG040506	MsaG043777	0.817424	5.781335e-52	1.188936e-49
MsaG040683	MsaG043777	0.806748	1.200397e-49	1.896127e-47
MsaG041010	MsaG043777	0.809624	2.946792e-50	4.986897e-48
MsaG040907	MsaG043777	0.803322	6.201640e-49	9.043386e-47
MsaG041066	MsaG043777	0.819471	1.996716e-52	4.330511e-50
MsaG041370	MsaG043777	0.802268	1.021163e-48	1.453457e-46
MsaG041534	MsaG043777	0.802732	8.202915e-49	1.179993e-46
MsaG041532	MsaG043777	0.810259	2.154470e-50	3.702539e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043777	MtrunA17_Chr8g0366501	94.215	363	18	2	1	362	1	361	0.0	689
MsaG043777	MtrunA17_Chr8g0366521	87.541	305	20	1	352	638	1	305	0.0	555
MsaG043777	MtrunA17_Chr5g0433861	79.412	306	44	2	352	638	1	306	6.92e-176	501
MsaG043777	MtrunA17_Chr4g0063401	36.715	207	94	6	87	286	72	248	1.43e-33	129
MsaG043777	MtrunA17_Chr1g0191601	34.454	238	132	9	369	592	46	273	2.89e-28	117
MsaG043777	MtrunA17_Chr7g0273051	34.404	218	129	7	385	592	44	257	2.34e-27	114
MsaG043777	MtrunA17_Chr3g0132491	39.560	182	91	6	426	592	106	283	3.19e-27	114
MsaG043777	MtrunA17_Chr4g0063361	34.158	202	94	6	83	283	76	239	3.88e-27	110
MsaG043777	MtrunA17_Chr5g0426881	33.891	239	125	9	374	592	64	289	7.01e-26	110
MsaG043777	MtrunA17_Chr3g0123631	33.488	215	107	9	381	586	1	188	2.55e-25	103
MsaG043777	MtrunA17_Chr6g0470751	35.714	224	110	8	393	594	59	270	6.60e-25	105
MsaG043777	MtrunA17_Chr4g0063391	31.034	203	87	4	92	287	54	210	1.95e-24	102
MsaG043777	MtrunA17_Chr3g0123641	32.273	220	124	8	381	589	1	206	2.46e-24	102
MsaG043777	MtrunA17_Chr5g0426871	30.000	280	160	10	362	610	44	318	3.97e-24	105
MsaG043777	MtrunA17_Chr3g0098251	30.500	200	84	5	87	283	28	175	2.56e-21	92.4
MsaG043777	MtrunA17_Chr3g0105441	38.583	127	73	2	423	549	98	219	8.89e-21	92.4
MsaG043777	MtrunA17_Chr7g0274741	45.455	77	41	1	426	502	69	144	4.70e-20	88.2
MsaG043777	MtrunA17_Chr2g0325141	41.739	115	51	5	401	503	27	137	6.99e-20	86.7
MsaG043777	MtrunA17_Chr1g0184631	43.590	78	43	1	425	502	66	142	1.57e-19	86.7
MsaG043777	MtrunA17_Chr7g0274711	43.590	78	43	1	425	502	65	141	1.85e-19	86.7
MsaG043777	MtrunA17_Chr8g0336881	29.545	176	104	7	361	524	6	173	3.01e-18	86.3
MsaG043777	MtrunA17_Chr6g0486651	32.335	167	100	6	371	531	39	198	5.58e-18	86.3
MsaG043777	MtrunA17_Chr4g0067591	45.783	83	39	1	426	508	79	155	5.78e-18	84.3
MsaG043777	MtrunA17_Chr7g0274721	34.951	103	60	2	421	523	62	157	1.19e-17	80.9
MsaG043777	MtrunA17_Chr1g0197031	43.056	72	41	0	428	499	73	144	2.44e-17	80.1
MsaG043777	MtrunA17_Chr3g0113811	30.065	153	95	3	373	525	32	172	4.43e-17	79.3
MsaG043777	MtrunA17_Chr2g0295571	31.214	173	95	4	356	508	2	170	7.24e-17	81.6
MsaG043777	MtrunA17_Chr1g0203541	40.625	96	56	1	409	503	87	182	7.57e-17	79.7
MsaG043777	MtrunA17_Chr2g0325161	45.783	83	41	2	427	506	91	172	8.82e-17	80.5
MsaG043777	MtrunA17_Chr2g0301871	42.857	77	43	1	436	512	63	138	1.07e-16	81.3
MsaG043777	MtrunA17_Chr2g0307411	44.156	77	36	1	426	502	76	145	1.59e-16	78.6
MsaG043777	MtrunA17_Chr3g0126931	44.737	76	38	1	427	502	101	172	1.81e-16	81.6
MsaG043777	MtrunA17_Chr4g0063371	36.975	119	46	2	83	201	56	145	2.06e-16	79.0
MsaG043777	MtrunA17_Chr1g0197021	46.970	66	35	0	434	499	76	141	2.70e-16	76.6
MsaG043777	MtrunA17_Chr3g0118061	42.105	76	42	1	427	502	76	149	2.75e-16	78.6
MsaG043777	MtrunA17_Chr7g0276591	33.099	142	85	4	367	504	13	148	3.09e-16	79.7
MsaG043777	MtrunA17_Chr4g0030831	42.466	73	40	1	427	499	84	154	3.23e-16	77.0
MsaG043777	MtrunA17_Chr4g0073141	47.368	76	37	1	427	502	117	189	3.43e-16	82.0
MsaG043777	MtrunA17_Chr1g0198201	31.915	141	91	2	374	512	6	143	7.77e-16	77.0
MsaG043777	MtrunA17_Chr7g0274731	33.981	103	61	2	421	523	83	178	8.67e-16	76.3
MsaG043777	MtrunA17_Chr8g0364881	42.105	76	40	1	427	502	68	139	4.64e-15	77.0
MsaG043777	MtrunA17_Chr1g0186661	37.500	120	64	5	391	502	60	176	6.85e-15	76.6
MsaG043777	MtrunA17_Chr3g0118071	42.105	76	42	1	427	502	76	149	8.26e-15	73.9
MsaG043777	MtrunA17_Chr5g0427431	41.096	73	39	1	427	499	134	202	9.86e-15	77.0
MsaG043777	MtrunA17_Chr1g0167811	32.117	137	82	4	370	499	33	165	1.22e-14	75.5
MsaG043777	MtrunA17_Chr3g0133001	38.961	77	43	1	427	503	130	202	1.37e-14	76.3
MsaG043777	MtrunA17_Chr6g0451031	33.333	123	67	5	382	500	1	112	2.10e-14	70.5
MsaG043777	MtrunA17_Chr3g0118091	41.892	74	40	2	428	501	41	111	6.23e-14	68.9
MsaG043777	MtrunA17_Chr4g0059281	39.744	78	43	1	427	504	106	179	6.51e-14	73.2
MsaG043777	MtrunA17_Chr5g0430781	44.304	79	36	2	422	499	81	152	7.89e-14	71.2
MsaG043777	MtrunA17_Chr7g0261091	27.381	168	92	7	364	518	4	154	1.32e-13	72.4
MsaG043777	MtrunA17_Chr7g0248831	32.323	99	65	1	427	525	80	176	2.17e-13	68.9
MsaG043777	MtrunA17_Chr5g0413841	29.545	176	101	5	344	502	18	187	2.38e-13	72.0
MsaG043777	MtrunA17_Chr4g0050041	29.545	176	94	7	359	512	40	207	8.87e-13	70.1
MsaG043777	MtrunA17_Chr1g0184171	26.012	173	113	7	348	510	16	183	9.39e-13	70.1
MsaG043777	MtrunA17_Chr5g0407431	31.081	148	85	6	361	502	14	150	1.61e-12	67.4
MsaG043777	MtrunA17_Chr8g0348151	34.444	90	53	1	427	516	90	173	1.79e-12	67.0
MsaG043777	MtrunA17_Chr6g0451161	28.571	154	93	4	368	513	66	210	1.83e-12	69.3
MsaG043777	MtrunA17_Chr8g0343571	43.023	86	40	4	438	521	68	146	1.98e-12	65.9
MsaG043777	MtrunA17_Chr2g0327791	45.205	73	38	1	428	500	108	178	2.00e-12	67.0
MsaG043777	MtrunA17_Chr1g0177041	41.892	74	42	1	427	500	74	146	2.72e-12	65.5
MsaG043777	MtrunA17_Chr3g0117821	33.333	126	72	5	381	500	9	128	3.73e-12	64.7
MsaG043777	MtrunA17_Chr8g0370171	37.931	87	52	1	426	512	69	153	4.29e-12	65.9
MsaG043777	MtrunA17_Chr8g0345361	38.636	88	42	3	427	509	92	172	4.86e-12	66.6
MsaG043777	MtrunA17_Chr5g0411081	41.667	84	33	2	427	504	122	195	6.20e-12	67.8
MsaG043777	MtrunA17_Chr8g0366561	40.789	76	43	1	427	502	114	187	6.54e-12	67.4
MsaG043777	MtrunA17_Chr7g0248841	28.889	90	64	0	413	502	60	149	7.48e-12	63.9
MsaG043777	MtrunA17_Chr5g0409211	31.387	137	65	7	380	500	14	137	1.54e-11	63.5
MsaG043777	MtrunA17_Chr4g0027761	40.541	74	37	1	426	499	99	165	1.54e-11	63.9
MsaG043777	MtrunA17_Chr5g0437361	37.037	81	47	2	423	502	71	148	2.18e-11	62.8
MsaG043777	MtrunA17_Chr4g0013561	37.975	79	38	2	427	502	85	155	2.52e-11	63.9
MsaG043777	MtrunA17_Chr8g0383921	38.462	78	45	1	422	499	106	180	2.56e-11	63.5
MsaG043777	MtrunA17_Chr8g0369571	30.702	114	70	1	434	538	67	180	2.76e-11	62.8
MsaG043777	MtrunA17_Chr3g0129671	34.416	154	76	7	374	516	59	198	3.50e-11	63.5
MsaG043777	MtrunA17_Chr8g0381731	41.333	75	36	2	427	499	148	216	3.50e-11	64.7
MsaG043777	MtrunA17_Chr3g0143301	32.061	131	66	4	379	503	4	117	4.13e-11	60.8
MsaG043777	MtrunA17_Chr8g0347461	31.915	94	59	2	433	524	117	207	4.14e-11	64.3
MsaG043777	MtrunA17_Chr5g0426781	28.022	182	111	5	333	499	20	196	4.32e-11	65.1
MsaG043777	MtrunA17_Chr8g0350741	38.571	70	39	1	437	502	65	134	5.70e-11	62.0
MsaG043777	MtrunA17_Chr2g0317671	40.299	67	39	1	437	502	138	204	5.91e-11	62.4
MsaG043777	MtrunA17_Chr7g0246761	35.526	76	46	1	427	502	63	135	6.56e-11	62.0
MsaG043777	MtrunA17_Chr2g0279431	52.941	51	24	0	456	506	160	210	7.50e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043777	AT1G32360.1	58.708	356	116	10	7	345	10	351	1.96e-105	325
MsaG043777	AT4G17920.1	43.972	282	119	11	352	609	1	267	3.76e-58	197
MsaG043777	AT5G46650.1	37.500	264	143	9	361	610	13	268	6.63e-47	167
MsaG043777	AT3G19360.1	37.395	238	126	6	87	314	98	322	1.14e-36	142
MsaG043777	AT3G19360.2	37.395	238	126	6	87	314	98	322	1.14e-36	142
MsaG043777	AT2G35420.1	34.286	245	123	8	371	610	22	233	1.19e-32	127
MsaG043777	AT2G35000.1	35.887	248	120	12	371	594	50	282	5.46e-31	125
MsaG043777	AT3G05200.1	33.942	274	148	10	336	592	6	263	2.80e-30	123
MsaG043777	AT2G34990.1	34.667	225	129	6	376	594	13	225	6.90e-30	120
MsaG043777	AT2G34990.2	34.667	225	129	6	376	594	35	247	1.70e-29	119
MsaG043777	AT4G09120.1	35.319	235	134	8	361	594	36	253	5.73e-29	119
MsaG043777	AT5G27420.1	35.681	213	104	6	380	592	53	232	6.43e-28	116
MsaG043777	AT1G35330.1	34.646	254	122	8	367	594	44	279	4.90e-27	112
MsaG043777	AT1G72200.1	33.190	232	134	8	370	592	61	280	5.25e-27	114
MsaG043777	AT4G40070.1	33.906	233	129	8	362	592	36	245	1.88e-25	108
MsaG043777	AT1G32361.1	38.947	190	88	9	401	573	103	281	7.01e-25	106
MsaG043777	AT2G35430.1	35.349	215	68	8	170	362	72	237	1.24e-23	100
MsaG043777	AT2G35430.1	37.500	176	69	7	24	194	29	168	3.08e-19	88.2
MsaG043777	AT4G09130.1	35.593	177	102	3	426	594	90	262	1.14e-22	100
MsaG043777	AT1G22500.1	36.111	180	90	6	427	592	89	257	1.30e-22	100
MsaG043777	AT4G09100.1	46.512	86	44	2	417	502	47	130	2.32e-22	93.6
MsaG043777	AT4G09110.1	41.667	108	57	2	426	533	93	194	8.04e-18	85.1
MsaG043777	AT5G43420.1	31.667	180	96	7	371	527	35	210	4.43e-17	84.0
MsaG043777	AT1G04360.1	31.613	155	94	5	371	516	42	193	5.72e-17	83.6
MsaG043777	AT3G18930.2	30.769	143	92	2	425	560	118	260	7.28e-17	83.6
MsaG043777	AT3G18930.3	30.769	143	92	2	425	560	118	260	7.28e-17	83.6
MsaG043777	AT3G18930.1	30.769	143	92	2	425	560	118	260	7.28e-17	83.6
MsaG043777	AT3G16720.1	33.333	144	65	4	380	504	35	166	1.70e-16	81.3
MsaG043777	AT3G60220.1	39.394	99	57	2	417	515	78	173	2.70e-16	81.3
MsaG043777	AT1G23980.1	47.368	76	36	1	427	502	118	189	4.32e-16	80.9
MsaG043777	AT3G48030.1	47.368	76	37	1	427	502	180	252	6.95e-16	80.1
MsaG043777	AT4G15975.1	33.945	109	60	3	401	503	20	122	8.34e-16	77.8
MsaG043777	AT3G48030.2	47.368	76	37	1	427	502	102	174	9.23e-16	78.6
MsaG043777	AT5G05810.1	42.857	77	40	1	427	503	120	192	9.29e-16	80.5
MsaG043777	AT4G30400.1	46.575	73	36	1	427	499	107	176	1.80e-15	79.7
MsaG043777	AT3G62690.1	35.135	148	75	6	372	513	33	165	1.89e-15	77.0
MsaG043777	AT2G20030.1	34.104	173	88	7	370	521	27	194	3.04e-15	78.6
MsaG043777	AT2G18650.1	46.053	76	38	1	427	502	99	171	6.44e-15	77.8
MsaG043777	AT2G42350.1	37.255	102	58	2	401	501	48	144	9.70e-15	74.3
MsaG043777	AT2G34000.1	38.462	91	47	2	418	499	43	133	1.51e-14	72.0
MsaG043777	AT5G40250.1	26.904	197	120	5	367	543	39	231	2.67e-14	75.5
MsaG043777	AT5G10380.1	42.683	82	44	1	456	534	134	215	3.49e-14	74.3
MsaG043777	AT2G47560.1	30.435	138	85	4	372	509	33	159	6.90e-14	72.0
MsaG043777	AT4G28890.1	45.205	73	36	1	427	499	97	165	8.69e-14	74.3
MsaG043777	AT4G17905.1	31.034	174	104	5	347	508	37	206	1.04e-13	72.8
MsaG043777	AT1G20823.1	33.113	151	85	6	357	502	17	156	1.61e-13	70.1
MsaG043777	AT5G06490.1	36.559	93	56	1	427	516	96	188	2.65e-13	69.7
MsaG043777	AT2G27940.1	28.916	166	66	6	378	508	52	200	2.70e-13	70.5
MsaG043777	AT4G17905.2	31.034	174	104	5	347	508	63	232	4.07e-13	71.6
MsaG043777	AT5G57750.1	40.541	74	41	1	428	501	96	166	5.65e-13	68.9
MsaG043777	AT2G17450.1	36.800	125	66	5	385	502	29	147	1.15e-12	67.4
MsaG043777	AT2G35910.1	43.243	74	38	1	427	500	121	190	1.74e-12	67.8
MsaG043777	AT1G53820.1	37.931	87	45	2	427	511	95	174	3.25e-12	68.6
MsaG043777	AT1G53010.1	37.500	80	47	1	426	502	96	175	3.49e-12	65.9
MsaG043777	AT1G76410.1	31.126	151	77	6	363	502	15	149	3.73e-12	65.9
MsaG043777	AT1G72310.1	54.902	51	23	0	455	505	125	175	1.26e-11	66.6
MsaG043777	AT2G42360.1	33.051	118	64	2	401	506	43	157	1.67e-11	65.1
MsaG043777	AT3G03550.1	41.892	74	35	2	428	499	134	201	1.85e-11	66.6
MsaG043777	AT4G10150.1	29.710	138	79	5	374	507	38	161	3.28e-11	64.3
MsaG043777	AT5G17600.1	27.039	233	136	10	372	587	60	275	3.32e-11	65.9
MsaG043777	AT4G38140.1	39.726	73	43	1	449	520	54	126	5.35e-11	61.6
MsaG043777	AT3G43430.1	45.455	55	21	1	457	502	83	137	6.08e-11	62.0
MsaG043777	AT5G01880.1	42.105	76	40	1	427	502	79	150	6.87e-11	61.6
MsaG043777	AT5G58580.1	29.747	158	101	3	426	582	110	258	6.96e-11	64.3
MsaG043777	AT3G60966.1	48.000	50	24	1	457	506	62	109	9.82e-11	60.5

Find 189 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTGGTGGAGGAGGAGGAGG+TGG	0.204425	8:+51026033	MsaT043777.1:CDS
GGTGGAGGTGGTGGAGGAGG+AGG	0.223597	8:+51026027	MsaT043777.1:CDS
CTTTGCAAGTATTGCTTTGC+AGG	0.223962	8:+51029001	MsaT043777.1:CDS
GGTGGCAGTGGTGGTGGAGG+TGG	0.225391	8:+51025601	MsaT043777.1:CDS
GGAGGTGGTGGAGGAGGAGG+AGG	0.235103	8:+51026030	MsaT043777.1:CDS
TATGAATAATAGGTCTTATA+AGG	0.235365	8:+51025873	MsaT043777.1:CDS
AGTTTAGGTCCTGGTGGTTA+TGG	0.246502	8:+51026000	MsaT043777.1:CDS
CTCGACAATACCCTTATAAA+TGG	0.258848	8:+51029106	MsaT043777.1:CDS
GGTGGTGGAGGTGGTGGAGG+AGG	0.265178	8:+51026024	MsaT043777.1:CDS
ACTGAGGAAGGTTGTCCTTA+TGG	0.268283	8:+51025919	MsaT043777.1:CDS
TATGGTGGTGGTGGAGGTGG+TGG	0.279719	8:+51026018	MsaT043777.1:CDS
AAGTGGGGAATCCATTTATA+AGG	0.284109	8:-51029117	None:intergenic
GATTGCCTGAACATGTTATA+AGG	0.284877	8:+51029640	MsaT043777.1:CDS
CACATTATCAGCATGAGTTT+TGG	0.299688	8:-51027581	None:intergenic
GGTGGTGGTGGAGGTGGTGG+AGG	0.301864	8:+51026021	MsaT043777.1:CDS
GGTTATGGTGGTGGTGGAGG+TGG	0.308759	8:+51026015	MsaT043777.1:CDS
CAATTCGAAGGCTTCAAATT+AGG	0.308899	8:-51026132	None:intergenic
CGTCCTCATCTTATGCTTTG+TGG	0.316142	8:+51028961	MsaT043777.1:CDS
AAATTACAGTTCGTTATATA+AGG	0.316371	8:-51025703	None:intergenic
CAGATATGGAGGTGGGCTTA+TGG	0.316746	8:+51027498	MsaT043777.1:CDS
CAATCCGACAATGTCTTTAT+CGG	0.321556	8:+51028868	MsaT043777.1:CDS
GGTTCAGATGTTTATCATCT+TGG	0.329111	8:+51027625	MsaT043777.1:CDS
GCGGCTGGTGCGGCCGCGGT+TGG	0.347146	8:+51026102	MsaT043777.1:CDS
CTAATTTGAAGCCTTCGAAT+TGG	0.351114	8:+51026133	MsaT043777.1:CDS
GAGAGTGTGGCGATTAGTTT+AGG	0.358460	8:+51025985	MsaT043777.1:CDS
GTCTTATGTGTTGGAGCCGA+CGG	0.361054	8:-51028908	None:intergenic
GGCAGTGGTGGTGGAGGTGG+AGG	0.366823	8:+51025604	MsaT043777.1:CDS
GGTGCGGCCGCGGTTGGGAA+TGG	0.372043	8:+51026108	MsaT043777.1:CDS
TGCGTCGGCCGCCGGAGAAT+TGG	0.373994	8:+51025746	MsaT043777.1:CDS
CGGCTGGTGCGGCCGCGGTT+GGG	0.374610	8:+51026103	MsaT043777.1:CDS
GGTGGTGGTGGCAGTGGTGG+TGG	0.378205	8:+51025595	MsaT043777.1:CDS
TAGGGGAGAGTATGAATAAT+AGG	0.392211	8:+51025863	MsaT043777.1:CDS
AGTGAAGAGGAGCCAGATAC+TGG	0.392692	8:-51029753	None:intergenic
CTGTAGCACCATGAGCAAAA+TGG	0.399102	8:-51026215	None:intergenic
TGTAATAAGTGGGAGATGAC+TGG	0.409320	8:+51026168	MsaT043777.1:CDS
CCTCCCCTTATAACATGTTC+AGG	0.410708	8:-51029645	None:intergenic
GCCTTGCATCGCACGGCCTC+AGG	0.411075	8:+51029040	MsaT043777.1:CDS
GGTGGTGGCAGTGGTGGTGG+AGG	0.414245	8:+51025598	MsaT043777.1:CDS
GGTGGTTATGGTGGTGGTGG+AGG	0.415973	8:+51026012	MsaT043777.1:CDS
TCTTATGTGTTGGAGCCGAC+GGG	0.417916	8:-51028907	None:intergenic
ATGACTGGGTATTGTCCCTT+TGG	0.419828	8:+51026183	MsaT043777.1:CDS
ATGAATAATAGGTCTTATAA+GGG	0.419939	8:+51025874	MsaT043777.1:CDS
ACCACAAGTCGATACATTCT+TGG	0.421209	8:-51029267	None:intergenic
GGAGGAGGAGGTGGGAGTGT+TGG	0.423488	8:+51026042	MsaT043777.1:CDS
CGGAAGATGAGTATCGTTAC+TGG	0.423843	8:+51025476	MsaT043777.1:CDS
ATTGCCTGAACATGTTATAA+GGG	0.424041	8:+51029641	MsaT043777.1:CDS
TACTGGAACGGAAACGATGC+TGG	0.426962	8:+51025493	MsaT043777.1:CDS
ACTGCAGAATTACACAGATA+TGG	0.430785	8:+51027484	MsaT043777.1:intron
GTTGGTAGTGTTGGTGGTAG+TGG	0.432301	8:+51026060	MsaT043777.1:CDS
TATTTGCTTGCTAGAGTTCG+AGG	0.434293	8:+51029198	MsaT043777.1:CDS
GCGGCGGAGCCGCCGATAGC+TGG	0.440541	8:+51025428	MsaT043777.1:CDS
AAACTAGGATTTGTAATAAG+TGG	0.442008	8:+51026157	MsaT043777.1:CDS
GGTGGGAGTGTTGGTAGTGT+TGG	0.443949	8:+51026051	MsaT043777.1:CDS
GGTCAACCGACCAAGCTGAC+TGG	0.444227	8:+51025449	MsaT043777.1:CDS
GACGGTGGTGGTGGCAGTGG+TGG	0.445426	8:+51025592	MsaT043777.1:CDS
TCAAGGTCGGTTCGACAAAC+GGG	0.447781	8:-51029310	None:intergenic
AGCCTTCGAATTGGAAAACT+AGG	0.448493	8:+51026142	MsaT043777.1:CDS
GCTATCGGCGGCTCCGCCGC+CGG	0.448730	8:-51025425	None:intergenic
TGCGATGCAAGGCCCACATA+TGG	0.451393	8:-51029030	None:intergenic
ATCAAGGTCGGTTCGACAAA+CGG	0.452254	8:-51029311	None:intergenic
TTCACTTGCTCATGCTCAAG+AGG	0.462873	8:+51029770	MsaT043777.1:CDS
GATACACGCATTGATGTTAG+AGG	0.463368	8:+51029435	MsaT043777.1:CDS
GGGAGTGTTGGTAGTGTTGG+TGG	0.465014	8:+51026054	MsaT043777.1:CDS
GTGGTGGAGGAGGAGGAGGT+GGG	0.465072	8:+51026034	MsaT043777.1:CDS
AGCATAAGATGAGGACGGTA+AGG	0.470038	8:-51028955	None:intergenic
TCCTGAGGCCGTGCGATGCA+AGG	0.472160	8:-51029041	None:intergenic
AAACATGGCAACAAATGGTT+AGG	0.473415	8:-51029240	None:intergenic
CCGTCTTCAAATTCGCGTGC+AGG	0.475752	8:+51025529	MsaT043777.1:CDS
CAAGACGGTGGTGGTGGCAG+TGG	0.476611	8:+51025589	MsaT043777.1:CDS
GGAGGAGCTGCGTCGGCCGC+CGG	0.477423	8:+51025738	MsaT043777.1:CDS
AGGGTATTGTCGAGTCCTCT+AGG	0.479457	8:-51029097	None:intergenic
TCGAATCGCGCAAAAGCGAT+TGG	0.480919	8:+51025628	MsaT043777.1:CDS
CCTGGTGGTTATGGTGGTGG+TGG	0.482325	8:+51026009	MsaT043777.1:CDS
TGTTGCGTCTGACACAAAAC+AGG	0.484755	8:+51027549	MsaT043777.1:CDS
AGTTTCAGATACCGACGGTT+GGG	0.486443	8:+51025827	MsaT043777.1:CDS
GGTCCTGGTGGTTATGGTGG+TGG	0.487385	8:+51026006	MsaT043777.1:CDS
GGTGTTGTTGTTGTTGCGGC+TGG	0.488713	8:+51026087	MsaT043777.1:CDS
TTACTTCTCGATTTCTTACT+CGG	0.489176	8:-51025562	None:intergenic
CTTCCGTCGCCCAGTCAGCT+TGG	0.490823	8:-51025459	None:intergenic
GTCAACCGACCAAGCTGACT+GGG	0.495786	8:+51025450	MsaT043777.1:CDS
AACTAGGATTTGTAATAAGT+GGG	0.496877	8:+51026158	MsaT043777.1:CDS
GTTGCATCAAATCCTCCTAC+TGG	0.500963	8:+51027604	MsaT043777.1:CDS
GGTTCCGATAAAGACATTGT+CGG	0.502632	8:-51028872	None:intergenic
GTGGAAAACATGGCAACAAA+TGG	0.502987	8:-51029245	None:intergenic
CGAATCGCGCAAAAGCGATT+GGG	0.506056	8:+51025629	MsaT043777.1:CDS
GTGGCGATTAGTTTAGGTCC+TGG	0.507154	8:+51025991	MsaT043777.1:CDS
TGAAGGCTACTAGTGCCGGT+GGG	0.509657	8:-51028931	None:intergenic
AGTGTTGGTGGTAGTGGTAG+TGG	0.513157	8:+51026066	MsaT043777.1:CDS
ATCGGCGGCTCCGCCGCCGG+TGG	0.513840	8:-51025422	None:intergenic
TGTTGCGGCTGGTGCGGCCG+CGG	0.515515	8:+51026098	MsaT043777.1:CDS
CGTCGCCCAGTCAGCTTGGT+CGG	0.519038	8:-51025455	None:intergenic
CACATCAGCGTAGAGGAAAG+TGG	0.519603	8:-51029134	None:intergenic
AAAGTACAACTATCTCCATA+AGG	0.520248	8:-51025934	None:intergenic
CAAATCATCACCACCGGCGG+CGG	0.520822	8:+51025412	MsaT043777.1:CDS
CCTACACCTTGTCGTAATTG+TGG	0.521228	8:+51029720	MsaT043777.1:CDS
CATTCTATAGTAATGATTAG+AGG	0.523668	8:+51029585	MsaT043777.1:CDS
GGGTATTGTCGAGTCCTCTA+GGG	0.524183	8:-51029096	None:intergenic
ACAATCTCCTGCCAATTCTC+CGG	0.526020	8:-51025757	None:intergenic
GCCGACGGGGTGTCGTACTT+AGG	0.528065	8:-51028893	None:intergenic
CAATGGAAGGTCTTTGTGAA+GGG	0.529629	8:-51027651	None:intergenic
GGAGAATTGGCAGGAGATTG+TGG	0.530968	8:+51025759	MsaT043777.1:CDS
AGTGGGGAATCCATTTATAA+GGG	0.532337	8:-51029116	None:intergenic
TGTATCATTGCACGGTAATG+AGG	0.534991	8:-51029418	None:intergenic
AATTCGCAAGACGGTGGTGG+TGG	0.537605	8:+51025583	MsaT043777.1:CDS
TTTGGTTGGGAGGTGCATCA+AGG	0.540098	8:-51029327	None:intergenic
TACATTCTTGGTGGAAAACA+TGG	0.541331	8:-51029255	None:intergenic
ACCAAGAATGTATCGACTTG+TGG	0.541389	8:+51029266	MsaT043777.1:CDS
TCGGCCGCCGGAGAATTGGC+AGG	0.541968	8:+51025750	MsaT043777.1:CDS
GGAGTGTGATTGAGCAGCCG+AGG	0.545850	8:+51025800	MsaT043777.1:CDS
GAAGGCTACTAGTGCCGGTG+GGG	0.546190	8:-51028930	None:intergenic
AAAATGGCATTTGTTACCAA+AGG	0.546912	8:-51026199	None:intergenic
ACATCAGCGTAGAGGAAAGT+GGG	0.551829	8:-51029133	None:intergenic
GGCCTCTGACTCACAATGGA+AGG	0.553370	8:-51027664	None:intergenic
GCCGGTGGGGTCTTATGTGT+TGG	0.554250	8:-51028917	None:intergenic
TTAGGTCCTGGTGGTTATGG+TGG	0.556983	8:+51026003	MsaT043777.1:CDS
GTGAAGGCTACTAGTGCCGG+TGG	0.557398	8:-51028932	None:intergenic
AAATGGCATTTGTTACCAAA+GGG	0.557541	8:-51026198	None:intergenic
GTAATAAGTGGGAGATGACT+GGG	0.557999	8:+51026169	MsaT043777.1:CDS
GTTGGGAGGTGCATCAAGGT+CGG	0.563890	8:-51029323	None:intergenic
TTGAGCATGAGCAAGTGAAG+AGG	0.565286	8:-51029766	None:intergenic
AGTAATTCGCAAGACGGTGG+TGG	0.565878	8:+51025580	MsaT043777.1:CDS
CTATGCTGTAAGTTTCGTGT+GGG	0.569773	8:+51025673	MsaT043777.1:CDS
ACAAGTCGATACATTCTTGG+TGG	0.571031	8:-51029264	None:intergenic
GATGAGGACGGTAAGGGTGA+AGG	0.573153	8:-51028948	None:intergenic
TAGTGGTGTTGTTGTTGTTG+CGG	0.573499	8:+51026083	MsaT043777.1:CDS
AGGGTGAAGGCTACTAGTGC+CGG	0.576311	8:-51028935	None:intergenic
GAGTGTGATTGAGCAGCCGA+GGG	0.582910	8:+51025801	MsaT043777.1:CDS
TATGGAGGTGGGCTTATGGA+AGG	0.583879	8:+51027502	MsaT043777.1:CDS
GAATTACACAGATATGGAGG+TGG	0.593880	8:+51027490	MsaT043777.1:intron
ACAATGGAAGGTCTTTGTGA+AGG	0.593936	8:-51027652	None:intergenic
ATCGAAGAATCGCGAGAGTG+TGG	0.594391	8:+51025972	MsaT043777.1:CDS
CGACCAAGCTGACTGGGCGA+CGG	0.595148	8:+51025456	MsaT043777.1:CDS
TTGGTCGGTTGACCAGCTAT+CGG	0.595738	8:-51025440	None:intergenic
GATGAGTATCGTTACTGGAA+CGG	0.598603	8:+51025481	MsaT043777.1:CDS
CAAAACTCATGCTGATAATG+TGG	0.598802	8:+51027582	MsaT043777.1:CDS
TATGTGGGCCTTGCATCGCA+CGG	0.600071	8:+51029033	MsaT043777.1:CDS
GTCGTTCAAATCATCACCAC+CGG	0.600321	8:+51025406	MsaT043777.1:CDS
CCACCACCACCATAACCACC+AGG	0.606081	8:-51026009	None:intergenic
TGTTGTTGTTGCGGCTGGTG+CGG	0.606592	8:+51026092	MsaT043777.1:CDS
GCATAAGATGAGGACGGTAA+GGG	0.609110	8:-51028954	None:intergenic
ACTAGAGCTCAAATACATGA+AGG	0.611229	8:+51029486	MsaT043777.1:CDS
GAGTTTCAGATACCGACGGT+TGG	0.612303	8:+51025826	MsaT043777.1:CDS
ACTATGCTGTAAGTTTCGTG+TGG	0.615988	8:+51025672	MsaT043777.1:CDS
GGTATCTGAAACTCCTCCCT+CGG	0.618122	8:-51025817	None:intergenic
GGTATTGTCGAGTCCTCTAG+GGG	0.621630	8:-51029095	None:intergenic
CCTGAACATGTTATAAGGGG+AGG	0.625474	8:+51029645	MsaT043777.1:CDS
AAAGTACTCGACCCAACCGT+CGG	0.626587	8:-51025838	None:intergenic
TTGCCTGAACATGTTATAAG+GGG	0.631724	8:+51029642	MsaT043777.1:CDS
ATAGTGTGGAGGAGCTGCGT+CGG	0.631733	8:+51025731	MsaT043777.1:CDS
TAAACATCTGAACCAGTAGG+AGG	0.634383	8:-51027616	None:intergenic
TGTGATTGAGCAGCCGAGGG+AGG	0.635225	8:+51025804	MsaT043777.1:CDS
AATTACACAGATATGGAGGT+GGG	0.635355	8:+51027491	MsaT043777.1:CDS
TCAATGCGTGTATCATTGCA+CGG	0.637414	8:-51029426	None:intergenic
TGATAAACATCTGAACCAGT+AGG	0.638955	8:-51027619	None:intergenic
TCGAGAAGTAATTCGCAAGA+CGG	0.639038	8:+51025574	MsaT043777.1:CDS
AGAAGTAATTCGCAAGACGG+TGG	0.641319	8:+51025577	MsaT043777.1:CDS
CCACAATTACGACAAGGTGT+AGG	0.641952	8:-51029720	None:intergenic
CTTATGTGTTGGAGCCGACG+GGG	0.644052	8:-51028906	None:intergenic
TGAATAATAGGTCTTATAAG+GGG	0.644881	8:+51025875	MsaT043777.1:CDS
ACGCATTGATGTTAGAGGAG+AGG	0.647528	8:+51029440	MsaT043777.1:CDS
CCTGCACGCGAATTTGAAGA+CGG	0.647659	8:-51025529	None:intergenic
TGGCTGCTCATGAAGAAGAG+AGG	0.650335	8:+51025779	MsaT043777.1:CDS
TCCAACACATAAGACCCCAC+CGG	0.650786	8:+51028916	MsaT043777.1:CDS
ACAATGGATTACAACAGAGA+CGG	0.651622	8:+51025379	None:intergenic
ATGGAAGGAGAAAGCAGAGA+CGG	0.651866	8:+51027517	MsaT043777.1:CDS
ATCTCCTGCCAATTCTCCGG+CGG	0.654680	8:-51025754	None:intergenic
GCGATTAGTTTAGGTCCTGG+TGG	0.657986	8:+51025994	MsaT043777.1:CDS
CACAAAGCATAAGATGAGGA+CGG	0.659870	8:-51028960	None:intergenic
GAGACGAACGAGGGATCCTG+AGG	0.664270	8:-51029056	None:intergenic
GGTCTTTCACATCAGCGTAG+AGG	0.667323	8:-51029141	None:intergenic
TCGTTCGTCTCTCACCTGAG+AGG	0.670040	8:+51029068	MsaT043777.1:CDS
GTTCAAATCATCACCACCGG+CGG	0.671677	8:+51025409	MsaT043777.1:CDS
GGAGGAGTTTCAGATACCGA+CGG	0.673084	8:+51025822	MsaT043777.1:CDS
GTCGGTTGACCAGCTATCGG+CGG	0.673668	8:-51025437	None:intergenic
TCTCAGGTGAGAGACGAACG+AGG	0.674476	8:-51029066	None:intergenic
GCAGAATTACACAGATATGG+AGG	0.676863	8:+51027487	MsaT043777.1:intron
ACCTAAGTACGACACCCCGT+CGG	0.677480	8:+51028892	MsaT043777.1:CDS
ACAAAACCACAATTACGACA+AGG	0.679042	8:-51029726	None:intergenic
TGATGTGAAAGACCACCGCA+AGG	0.681065	8:+51029150	MsaT043777.1:CDS
AAGCCACAAAGCATAAGATG+AGG	0.686417	8:-51028964	None:intergenic
CATCAGCGTAGAGGAAAGTG+GGG	0.689184	8:-51029132	None:intergenic
CTCAGGTGAGAGACGAACGA+GGG	0.690918	8:-51029065	None:intergenic
ATTAGGTCCATTCCCAACCG+CGG	0.701157	8:-51026115	None:intergenic
CTTCTCGATTTCTTACTCGG+CGG	0.707380	8:-51025559	None:intergenic
TATGCTGTAAGTTTCGTGTG+GGG	0.708514	8:+51025674	MsaT043777.1:CDS
TGGAACGGAAACGATGCTGG+AGG	0.723504	8:+51025496	MsaT043777.1:CDS
GTATTGTCGAGTCCTCTAGG+GGG	0.760054	8:-51029094	None:intergenic
TTTCAAGGTCACATTCAACG+GGG	0.767236	8:+51029562	MsaT043777.1:CDS
GTTGCGTCTGACACAAAACA+GGG	0.785414	8:+51027550	MsaT043777.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	51025382	51029797	51025382	ID=MsaG043777
Chr8	mRNA	51025382	51029797	51025382	ID=MsaT043777.1;Parent=MsaG043777
Chr8	exon	51025382	51026237	51025382	ID=MsaT043777.1.exon1;Parent=MsaT043777.1
Chr8	CDS	51025382	51026237	51025382	ID=cds.MsaT043777.1;Parent=MsaT043777.1
Chr8	exon	51027491	51027672	51027491	ID=MsaT043777.1.exon2;Parent=MsaT043777.1
Chr8	CDS	51027491	51027672	51027491	ID=cds.MsaT043777.1;Parent=MsaT043777.1
Chr8	exon	51028863	51029352	51028863	ID=MsaT043777.1.exon3;Parent=MsaT043777.1
Chr8	CDS	51028863	51029352	51028863	ID=cds.MsaT043777.1;Parent=MsaT043777.1
Chr8	exon	51029409	51029797	51029409	ID=MsaT043777.1.exon4;Parent=MsaT043777.1
Chr8	CDS	51029409	51029797	51029409	ID=cds.MsaT043777.1;Parent=MsaT043777.1

Gene Sequence

>MsaT043777.1

ATGGATTACAACAGAGACGGCAACGTCGTTCAAATCATCACCACCGGCGGCGGAGCCGCCGATAGCTGGTCAACCGACCAAGCTGACTGGGCGACGGAAGATGAGTATCGTTACTGGAACGGAAACGATGCTGGAGGTGAAACAACTCCGTCTTCAAATTCGCGTGCAGGAAGTGAGCCGCCGAGTAAGAAATCGAGAAGTAATTCGCAAGACGGTGGTGGTGGCAGTGGTGGTGGAGGTGGAGGTTCGAATCGCGCAAAAGCGATTGGGAAAATGTTTTTTAAGACGAAACTATGCTGTAAGTTTCGTGTGGGGACATGTCCTTATATAACGAACTGTAATTTTGCTCATAGTGTGGAGGAGCTGCGTCGGCCGCCGGAGAATTGGCAGGAGATTGTGGCTGCTCATGAAGAAGAGAGGAGTGTGATTGAGCAGCCGAGGGAGGAGTTTCAGATACCGACGGTTGGGTCGAGTACTTTTGTAGGGGAGAGTATGAATAATAGGTCTTATAAGGGGAGACATTGTAAGAAATTTTATACTGAGGAAGGTTGTCCTTATGGAGATAGTTGTACTTTTCTTCATGATGAGCAATCGAAGAATCGCGAGAGTGTGGCGATTAGTTTAGGTCCTGGTGGTTATGGTGGTGGTGGAGGTGGTGGAGGAGGAGGAGGTGGGAGTGTTGGTAGTGTTGGTGGTAGTGGTAGTGGTGTTGTTGTTGTTGCGGCTGGTGCGGCCGCGGTTGGGAATGGACCTAATTTGAAGCCTTCGAATTGGAAAACTAGGATTTGTAATAAGTGGGAGATGACTGGGTATTGTCCCTTTGGTAACAAATGCCATTTTGCTCATGGTGCTACAGAATTACACAGATATGGAGGTGGGCTTATGGAAGGAGAAAGCAGAGACGGTGTTTCTGTTGTTGCGTCTGACACAAAACAGGGTGTACCTTCCAAAACTCATGCTGATAATGTGGTTGCATCAAATCCTCCTACTGGTTCAGATGTTTATCATCTTGGAGTCCCTTCACAAAGACCTTCCATTTTTCTCAATCCGACAATGTCTTTATCGGAACCTAAGTACGACACCCCGTCGGCTCCAACACATAAGACCCCACCGGCACTAGTAGCCTTCACCCTTACCGTCCTCATCTTATGCTTTGTGGCTTTCAGCGTTGTCTATCTTTGCAAGTATTGCTTTGCAGGCATTTTCCATATGTGGGCCTTGCATCGCACGGCCTCAGGATCCCTCGTTCGTCTCTCACCTGAGAGGTCACCCCCTAGAGGACTCGACAATACCCTTATAAATGGATTCCCCACTTTCCTCTACGCTGATGTGAAAGACCACCGCAAGGAAAAGAGTTACAGCTTAGAATGTGCTATTTGCTTGCTAGAGTTCGAGGACGATAGCTTGCTTCGTCTCCTAACCATTTGTTGCCATGTTTTCCACCAAGAATGTATCGACTTGTGGTTTGAATCTCACAAGACATGTCCCGTTTGTCGAACCGACCTTGATGCACCTCCCAACCAAACGCAGGGTATGACCTCATTACCGTGCAATGATACACGCATTGATGTTAGAGGAGAGGAAAGTGACAATACTAGTGAGATCACTAGAGCTCAAATACATGAAGGCGATCAACATAATGATCATGTGAGCAAGAGCATGCAACAAGAAGAACATATATTTTCAAGGTCACATTCAACGGGGCATTCTATAGTAATGATTAGAGGTGAAGAAAAAGATGATGAAAAATATACATTGAGATTGCCTGAACATGTTATAAGGGGAGGACACAATTTCACAAAGAGTTGTACAAATTACAGTGAGATGACATTAACAATGCCTACACCTTGTCGTAATTGTGGTTTTGTTAAACCAGTATCTGGCTCCTCTTCACTTGCTCATGCTCAAGAGGCTTGA

Protein sequence

>MsaT043777.1

MDYNRDGNVVQIITTGGGAADSWSTDQADWATEDEYRYWNGNDAGGETTPSSNSRAGSEPPSKKSRSNSQDGGGGSGGGGGGSNRAKAIGKMFFKTKLCCKFRVGTCPYITNCNFAHSVEELRRPPENWQEIVAAHEEERSVIEQPREEFQIPTVGSSTFVGESMNNRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYGGGGGGGGGGGGSVGSVGGSGSGVVVVAAGAAAVGNGPNLKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGESRDGVSVVASDTKQGVPSKTHADNVVASNPPTGSDVYHLGVPSQRPSIFLNPTMSLSEPKYDTPSAPTHKTPPALVAFTLTVLILCFVAFSVVYLCKYCFAGIFHMWALHRTASGSLVRLSPERSPPRGLDNTLINGFPTFLYADVKDHRKEKSYSLECAICLLEFEDDSLLRLLTICCHVFHQECIDLWFESHKTCPVCRTDLDAPPNQTQGMTSLPCNDTRIDVRGEESDNTSEITRAQIHEGDQHNDHVSKSMQQEEHIFSRSHSTGHSIVMIRGEEKDDEKYTLRLPEHVIRGGHNFTKSCTNYSEMTLTMPTPCRNCGFVKPVSGSSSLAHAQEA*