AlfalfaGEDB | MsaG043836

M. sativa ssp. caerulea / MsaG043836

KEGG: -
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009838 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010016 GO:0010052 GO:0010103 GO:0010118 GO:0010227 GO:0010374 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032881 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090627 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902066 GO:1902680 GO:1903338 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043836	XP_003628883.1	97.640	339	6	2	1	338	1	338	0.0	679

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043836	sp\|Q9LSL6\|DOF57_ARATH	37.571	354	149	14	4	338	16	316	3.29e-55	186

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043836	tr\|G7LIJ3\|G7LIJ3_MEDTR	97.640	339	6	2	1	338	1	338	0.0	679

TFs/TRs:

Gene ID	Type	Classification
MsaG043836	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000045	MsaG043836	0.806714	1.220342e-49	1.926053e-47
MsaG000083	MsaG043836	0.806423	1.404581e-49	2.201751e-47
MsaG000353	MsaG043836	0.803224	6.494836e-49	9.449839e-47
MsaG000534	MsaG043836	0.825099	1.000514e-53	2.523643e-51
MsaG000643	MsaG043836	0.814427	2.675849e-51	5.098682e-49
MsaG000976	MsaG043836	0.831083	3.679209e-55	1.098331e-52
MsaG001161	MsaG043836	0.822704	3.622272e-53	8.560974e-51
MsaG001196	MsaG043836	0.805572	2.116705e-49	3.251929e-47
MsaG001286	MsaG043836	0.838758	4.375448e-57	1.643052e-54
MsaG001367	MsaG043836	0.801169	1.712179e-48	2.376838e-46
MsaG001403	MsaG043836	0.802408	9.559698e-49	1.365061e-46
MsaG001558	MsaG043836	0.851329	1.820244e-60	1.032824e-57
MsaG001726	MsaG043836	0.831474	2.951633e-55	8.911975e-53
MsaG002732	MsaG043836	0.829731	7.845779e-55	2.253182e-52
MsaG003038	MsaG043836	0.816645	8.633115e-52	1.740042e-49
MsaG003141	MsaG043836	0.810363	2.046425e-50	3.525920e-48
MsaG003381	MsaG043836	0.805341	2.365723e-49	3.615063e-47
MsaG003638	MsaG043836	0.802394	9.620370e-49	1.373312e-46
MsaG003912	MsaG043836	0.804765	3.118118e-49	4.701489e-47
MsaG003927	MsaG043836	0.801955	1.183227e-48	1.672147e-46
MsaG004077	MsaG043836	0.800099	2.823333e-48	3.825809e-46
MsaG004308	MsaG043836	0.821743	6.037185e-53	1.390506e-50
MsaG004370	MsaG043836	0.807695	7.579526e-50	1.224458e-47
MsaG004406	MsaG043836	0.807934	6.747462e-50	1.096345e-47
MsaG004554	MsaG043836	0.816062	1.163855e-51	2.311159e-49
MsaG004603	MsaG043836	0.805662	2.027590e-49	3.121593e-47
MsaG004776	MsaG043836	0.847278	2.413990e-59	1.193182e-56
MsaG004794	MsaG043836	0.813838	3.604637e-51	6.767808e-49
MsaG005201	MsaG043836	0.806113	1.631575e-49	2.538741e-47
MsaG005425	MsaG043836	0.810734	1.703040e-50	2.960830e-48
MsaG005457	MsaG043836	0.828499	1.555790e-54	4.314636e-52
MsaG005623	MsaG043836	0.801914	1.206554e-48	1.703539e-46
MsaG005632	MsaG043836	0.810970	1.515442e-50	2.649880e-48
MsaG005761	MsaG043836	0.806962	1.081909e-49	1.717563e-47
MsaG005970	MsaG043836	0.804474	3.583048e-49	5.366199e-47
MsaG006016	MsaG043836	0.811993	9.105518e-51	1.632661e-48
MsaG006250	MsaG043836	0.807423	8.649413e-50	1.388234e-47
MsaG006254	MsaG043836	0.805855	1.847417e-49	2.857154e-47
MsaG006256	MsaG043836	0.807767	7.317208e-50	1.184132e-47
MsaG006257	MsaG043836	0.808164	6.028883e-50	9.850205e-48
MsaG006387	MsaG043836	0.800439	2.409061e-48	3.289694e-46
MsaG006763	MsaG043836	0.812089	8.679140e-51	1.559820e-48
MsaG007056	MsaG043836	0.810004	2.443435e-50	4.173154e-48
MsaG007206	MsaG043836	0.813013	5.463761e-51	1.004816e-48
MsaG007254	MsaG043836	0.825355	8.705615e-54	2.211430e-51
MsaG007600	MsaG043836	0.800040	2.901024e-48	3.925946e-46
MsaG007626	MsaG043836	0.820450	1.195225e-52	2.660287e-50
MsaG007669	MsaG043836	0.805479	2.213823e-49	3.393771e-47
MsaG007911	MsaG043836	0.804771	3.108320e-49	4.687414e-47
MsaG007984	MsaG043836	0.820567	1.123913e-52	2.509176e-50
MsaG008112	MsaG043836	0.823329	2.594606e-53	6.236801e-51
MsaG008113	MsaG043836	0.804572	3.418427e-49	5.131353e-47
MsaG008193	MsaG043836	0.820056	1.470032e-52	3.237963e-50
MsaG008250	MsaG043836	0.806722	1.215350e-49	1.918573e-47
MsaG008243	MsaG043836	0.804269	3.951835e-49	5.890622e-47
MsaG008631	MsaG043836	0.822846	3.358373e-53	7.967724e-51
MsaG009008	MsaG043836	0.805430	2.266135e-49	3.470028e-47
MsaG009067	MsaG043836	0.817574	5.349143e-52	1.104291e-49
MsaG009140	MsaG043836	0.810876	1.587311e-50	2.769153e-48
MsaG009206	MsaG043836	0.814298	2.856378e-51	5.425062e-49
MsaG009531	MsaG043836	0.820680	1.058898e-52	2.371052e-50
MsaG009532	MsaG043836	0.802104	1.103219e-48	1.564320e-46
MsaG009848	MsaG043836	0.809706	2.831125e-50	4.800523e-48
MsaG009859	MsaG043836	0.808681	4.682793e-50	7.746885e-48
MsaG009860	MsaG043836	0.818107	4.059119e-52	8.496022e-50
MsaG010051	MsaG043836	0.814363	2.764658e-51	5.259393e-49
MsaG010372	MsaG043836	0.801882	1.224974e-48	1.728285e-46
MsaG011018	MsaG043836	0.804878	2.953896e-49	4.465651e-47
MsaG011079	MsaG043836	0.826309	5.182543e-54	1.351768e-51
MsaG011256	MsaG043836	0.802787	7.992367e-49	1.151152e-46
MsaG011339	MsaG043836	0.800128	2.784336e-48	3.775437e-46
MsaG011346	MsaG043836	0.818954	2.614252e-52	5.593587e-50
MsaG011405	MsaG043836	0.823388	2.513668e-53	6.051866e-51
MsaG011397	MsaG043836	0.857043	4.155319e-62	2.891443e-59
MsaG011580	MsaG043836	0.830979	3.899761e-55	1.160698e-52
MsaG012169	MsaG043836	0.803701	5.180312e-49	7.620668e-47
MsaG012203	MsaG043836	0.802097	1.106643e-48	1.568951e-46
MsaG012262	MsaG043836	0.815427	1.609471e-51	3.145111e-49
MsaG012445	MsaG043836	0.822295	4.503925e-53	1.052785e-50
MsaG012454	MsaG043836	0.802737	8.183583e-49	1.177347e-46
MsaG012492	MsaG043836	0.811091	1.426714e-50	2.502204e-48
MsaG041940	MsaG043836	0.806973	1.076272e-49	1.709042e-47
MsaG041985	MsaG043836	0.809934	2.529646e-50	4.312982e-48
MsaG041990	MsaG043836	0.803818	4.899688e-49	7.227303e-47
MsaG042116	MsaG043836	0.842236	5.440066e-58	2.279164e-55
MsaG042575	MsaG043836	0.803765	5.023903e-49	7.401523e-47
MsaG043836	MsaG043850	0.817807	4.742541e-52	9.849763e-50
MsaG043836	MsaG043881	0.809443	3.222484e-50	5.429694e-48
MsaG043836	MsaG044319	0.813409	4.475192e-51	8.312097e-49
MsaG043836	MsaG044445	0.816895	7.592503e-52	1.540252e-49
MsaG043836	MsaG044621	0.811099	1.421153e-50	2.492923e-48
MsaG043836	MsaG044710	0.807500	8.332433e-50	1.339818e-47
MsaG043836	MsaG044925	0.804833	3.017695e-49	4.557393e-47
MsaG043836	MsaG045130	0.806785	1.179096e-49	1.864085e-47
MsaG043836	MsaG045492	0.808475	5.180513e-50	8.527526e-48
MsaG043836	MsaG045627	0.816488	9.357178e-52	1.878471e-49
MsaG043836	MsaG045672	0.801890	1.220432e-48	1.722216e-46
MsaG043836	MsaG045820	0.807644	7.768098e-50	1.253358e-47
MsaG043836	MsaG045859	0.820600	1.104143e-52	2.467201e-50
MsaG043836	MsaG046312	0.809393	3.302668e-50	5.557880e-48
MsaG043836	MsaG046671	0.809798	2.705561e-50	4.597935e-48
MsaG043836	MsaG046662	0.813815	3.646460e-51	6.842361e-49
MsaG043836	MsaG046786	0.804818	3.038668e-49	4.587484e-47
MsaG043836	MsaG046812	0.821407	7.213908e-53	1.646743e-50
MsaG043836	MsaG046867	0.800249	2.631629e-48	3.578140e-46
MsaG043836	MsaG047188	0.814564	2.496591e-51	4.773268e-49
MsaG043836	MsaG000271	0.804075	4.333562e-49	6.430912e-47
MsaG043836	MsaG001900	0.809545	3.063873e-50	5.175241e-48
MsaG043836	MsaG007620	0.828078	1.963253e-54	5.380436e-52
MsaG043836	MsaG010534	0.819013	2.534894e-52	5.432146e-50
MsaG043836	MsaG007511	0.812951	5.636646e-51	1.034987e-48
MsaG043836	MsaG008728	0.805895	1.812313e-49	2.805519e-47
MsaG043836	MsaG010555	0.811435	1.202381e-50	2.126584e-48
MsaG043836	MsaG014391	0.808337	5.540873e-50	9.090300e-48
MsaG043836	MsaG011623	0.809121	3.773811e-50	6.309529e-48
MsaG043836	MsaG019747	0.800276	2.599543e-48	3.536617e-46
MsaG043836	MsaG021945	0.809835	2.656890e-50	4.519274e-48
MsaG043836	MsaG019705	0.803336	6.159302e-49	8.984621e-47
MsaG043836	MsaG018051	0.845586	6.952212e-59	3.247694e-56
MsaG043836	MsaG020273	0.832228	1.926730e-55	5.946609e-53
MsaG043836	MsaG027558	0.800478	2.365384e-48	3.232877e-46
MsaG043836	MsaG028385	0.817134	6.712404e-52	1.370168e-49
MsaG043836	MsaG031743	0.804304	3.886646e-49	5.798147e-47
MsaG043836	MsaG032891	0.800177	2.721897e-48	3.694799e-46
MsaG043836	MsaG033056	0.800215	2.673927e-48	3.632821e-46
MsaG043836	MsaG033256	0.812715	6.344141e-51	1.158072e-48
MsaG043836	MsaG031428	0.814746	2.276930e-51	4.373328e-49
MsaG043836	MsaG030582	0.802687	8.379317e-49	1.204148e-46
MsaG043836	MsaG032292	0.823340	2.579375e-53	6.202071e-51
MsaG043836	MsaG034539	0.832101	2.069588e-55	6.364854e-53
MsaG043836	MsaG031746	0.830015	6.696658e-55	1.938923e-52
MsaG043836	MsaG033058	0.807609	7.901537e-50	1.273829e-47
MsaG043836	MsaG033283	0.835317	3.283389e-56	1.110268e-53
MsaG043836	MsaG036522	0.827148	3.274737e-54	8.743568e-52
MsaG043836	MsaG036648	0.821859	5.677762e-53	1.311767e-50
MsaG043836	MsaG038342	0.824198	1.626883e-53	4.003783e-51
MsaG043836	MsaG037217	0.820112	1.427427e-52	3.148834e-50
MsaG043836	MsaG042304	0.808064	6.330262e-50	1.031759e-47
MsaG043836	MsaG043209	0.837033	1.208978e-56	4.304781e-54
MsaG043836	MsaG043242	0.814480	2.605447e-51	4.970952e-49
MsaG043836	MsaG043148	0.828878	1.260680e-54	3.533524e-52
MsaG012772	MsaG043836	0.820853	9.663441e-53	2.173774e-50
MsaG012994	MsaG043836	0.822918	3.231151e-53	7.680954e-51
MsaG013148	MsaG043836	0.802241	1.034319e-48	1.471236e-46
MsaG013198	MsaG043836	0.802121	1.094365e-48	1.552390e-46
MsaG013322	MsaG043836	0.804705	3.208383e-49	4.830832e-47
MsaG013824	MsaG043836	0.811132	1.398372e-50	2.454850e-48
MsaG013849	MsaG043836	0.811396	1.226224e-50	2.166699e-48
MsaG014050	MsaG043836	0.800343	2.518792e-48	3.432047e-46
MsaG014216	MsaG043836	0.811879	9.636463e-51	1.723073e-48
MsaG014294	MsaG043836	0.833461	9.547992e-56	3.055255e-53
MsaG014481	MsaG043836	0.817741	4.907955e-52	1.017553e-49
MsaG014508	MsaG043836	0.801828	1.256567e-48	1.770679e-46
MsaG015382	MsaG043836	0.803521	5.643107e-49	8.266843e-47
MsaG015527	MsaG043836	0.831997	2.196128e-55	6.733305e-53
MsaG015782	MsaG043836	0.806961	1.082562e-49	1.718547e-47
MsaG016250	MsaG043836	0.817969	4.360584e-52	9.094385e-50
MsaG016819	MsaG043836	0.802087	1.112006e-48	1.576219e-46
MsaG017348	MsaG043836	0.801728	1.316949e-48	1.851526e-46
MsaG017459	MsaG043836	0.807181	9.731970e-50	1.552979e-47
MsaG017499	MsaG043836	0.825876	6.560438e-54	1.690799e-51
MsaG017500	MsaG043836	0.808606	4.857454e-50	8.020972e-48
MsaG017771	MsaG043836	0.815793	1.335763e-51	2.634468e-49
MsaG018212	MsaG043836	0.803385	6.018650e-49	8.789469e-47
MsaG018221	MsaG043836	0.806114	1.630422e-49	2.537055e-47
MsaG018511	MsaG043836	0.805789	1.907126e-49	2.944932e-47
MsaG018683	MsaG043836	0.821149	8.266420e-53	1.874289e-50
MsaG018780	MsaG043836	0.803201	6.568174e-49	9.551315e-47
MsaG018842	MsaG043836	0.830753	4.427581e-55	1.309251e-52
MsaG018960	MsaG043836	0.816285	1.038222e-51	2.073502e-49
MsaG018997	MsaG043836	0.802592	8.762950e-49	1.256573e-46
MsaG019153	MsaG043836	0.811810	9.975402e-51	1.780633e-48
MsaG019571	MsaG043836	0.830809	4.289953e-55	1.270619e-52
MsaG019622	MsaG043836	0.813136	5.135546e-51	9.473475e-49
MsaG019640	MsaG043836	0.806070	1.665529e-49	2.588982e-47
MsaG020449	MsaG043836	0.831290	3.273969e-55	9.831985e-53
MsaG020469	MsaG043836	0.801686	1.343337e-48	1.886823e-46
MsaG020648	MsaG043836	0.804584	3.398774e-49	5.103213e-47
MsaG020716	MsaG043836	0.815126	1.876911e-51	3.639597e-49
MsaG021410	MsaG043836	0.817241	6.353117e-52	1.300412e-49
MsaG021667	MsaG043836	0.814458	2.635141e-51	5.024830e-49
MsaG021650	MsaG043836	0.806624	1.274599e-49	2.007509e-47
MsaG022094	MsaG043836	0.820471	1.182073e-52	2.632429e-50
MsaG022746	MsaG043836	0.810729	1.707584e-50	2.968334e-48
MsaG022866	MsaG043836	0.814962	2.039527e-51	3.938889e-49
MsaG022979	MsaG043836	0.827177	3.222695e-54	8.611605e-52
MsaG023100	MsaG043836	0.804048	4.390899e-49	6.511816e-47
MsaG023704	MsaG043836	0.802400	9.594919e-49	1.369857e-46
MsaG023975	MsaG043836	0.823642	2.193399e-53	5.317503e-51
MsaG024366	MsaG043836	0.837793	7.739055e-57	2.820380e-54
MsaG024640	MsaG043836	0.821761	5.981240e-53	1.378271e-50
MsaG024912	MsaG043836	0.807333	9.039365e-50	1.447664e-47
MsaG025282	MsaG043836	0.828808	1.311086e-54	3.667488e-52
MsaG025405	MsaG043836	0.809690	2.853221e-50	4.836170e-48
MsaG025776	MsaG043836	0.826220	5.440034e-54	1.415420e-51
MsaG026937	MsaG043836	0.816675	8.500010e-52	1.714565e-49
MsaG027080	MsaG043836	0.815078	1.922676e-51	3.723988e-49
MsaG027182	MsaG043836	0.801885	1.223311e-48	1.726070e-46
MsaG027505	MsaG043836	0.806886	1.122697e-49	1.779100e-47
MsaG027829	MsaG043836	0.806804	1.167885e-49	1.847171e-47
MsaG027991	MsaG043836	0.832580	1.577781e-55	4.919652e-53
MsaG028250	MsaG043836	0.811997	9.087595e-51	1.629606e-48
MsaG028370	MsaG043836	0.802650	8.526495e-49	1.224282e-46
MsaG028419	MsaG043836	0.818686	3.006073e-52	6.386712e-50
MsaG028708	MsaG043836	0.818644	3.071824e-52	6.519386e-50
MsaG028711	MsaG043836	0.804717	3.189319e-49	4.803527e-47
MsaG028916	MsaG043836	0.820402	1.225350e-52	2.723873e-50
MsaG029732	MsaG043836	0.801624	1.382636e-48	1.939309e-46
MsaG029932	MsaG043836	0.804605	3.364751e-49	5.054581e-47
MsaG030944	MsaG043836	0.818026	4.233232e-52	8.841870e-50
MsaG031786	MsaG043836	0.820030	1.490194e-52	3.280158e-50
MsaG031787	MsaG043836	0.810273	2.140218e-50	3.679217e-48
MsaG032090	MsaG043836	0.802119	1.095292e-48	1.553630e-46
MsaG032399	MsaG043836	0.808565	4.957682e-50	8.178322e-48
MsaG032491	MsaG043836	0.812243	8.036554e-51	1.449832e-48
MsaG032913	MsaG043836	0.809099	3.815156e-50	6.375237e-48
MsaG033712	MsaG043836	0.817943	4.420440e-52	9.212995e-50
MsaG034175	MsaG043836	0.809233	3.572457e-50	5.988561e-48
MsaG034308	MsaG043836	0.839759	2.413360e-57	9.350040e-55
MsaG034416	MsaG043836	0.809931	2.534028e-50	4.320098e-48
MsaG034851	MsaG043836	0.804325	3.846594e-49	5.741247e-47
MsaG035008	MsaG043836	0.813099	5.232426e-51	9.643318e-49
MsaG035118	MsaG043836	0.845559	7.069074e-59	3.299423e-56
MsaG035278	MsaG043836	0.818641	3.077470e-52	6.530746e-50
MsaG035296	MsaG043836	0.806347	1.457250e-49	2.280166e-47
MsaG035317	MsaG043836	0.847226	2.495242e-59	1.231235e-56
MsaG035683	MsaG043836	0.816279	1.041408e-51	2.079572e-49
MsaG035700	MsaG043836	0.833129	1.153735e-55	3.656188e-53
MsaG035749	MsaG043836	0.817560	5.387786e-52	1.111894e-49
MsaG036068	MsaG043836	0.815298	1.718953e-51	3.348098e-49
MsaG036152	MsaG043836	0.815841	1.303149e-51	2.573324e-49
MsaG038043	MsaG043836	0.804538	3.474389e-49	5.211283e-47
MsaG039251	MsaG043836	0.826159	5.624107e-54	1.460911e-51
MsaG039755	MsaG043836	0.805601	2.087055e-49	3.208608e-47
MsaG039760	MsaG043836	0.823742	2.079235e-53	5.054219e-51
MsaG040143	MsaG043836	0.811493	1.168091e-50	2.068911e-48
MsaG040448	MsaG043836	0.807499	8.338734e-50	1.340777e-47
MsaG040578	MsaG043836	0.802781	8.012285e-49	1.153879e-46
MsaG040683	MsaG043836	0.804742	3.152101e-49	4.750219e-47
MsaG040907	MsaG043836	0.806242	1.533196e-49	2.393056e-47
MsaG041534	MsaG043836	0.806950	1.088135e-49	1.726950e-47
MsaG041532	MsaG043836	0.801179	1.703754e-48	2.365715e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043836	MtrunA17_Chr8g0367161	97.640	339	6	2	1	338	1	338	0.0	679
MsaG043836	MtrunA17_Chr5g0411951	50.296	338	93	16	32	338	43	336	3.29e-76	237
MsaG043836	MtrunA17_Chr2g0328021	51.181	127	50	4	12	127	40	165	4.42e-32	121
MsaG043836	MtrunA17_Chr4g0047001	68.493	73	23	0	33	105	56	128	9.44e-32	122
MsaG043836	MtrunA17_Chr8g0374251	66.667	78	25	1	32	108	68	145	4.12e-31	120
MsaG043836	MtrunA17_Chr4g0031411	75.758	66	13	1	31	93	74	139	4.18e-30	117
MsaG043836	MtrunA17_Chr7g0223311	56.044	91	30	1	16	96	51	141	1.43e-29	116
MsaG043836	MtrunA17_Chr8g0346551	70.000	70	19	1	21	90	15	82	6.41e-29	112
MsaG043836	MtrunA17_Chr4g0030051	42.941	170	75	6	28	187	37	194	1.03e-28	112
MsaG043836	MtrunA17_Chr3g0127201	69.697	66	20	0	21	86	16	81	1.28e-28	112
MsaG043836	MtrunA17_Chr2g0326001	64.935	77	24	1	13	86	18	94	1.91e-28	111
MsaG043836	MtrunA17_Chr2g0282441	75.806	62	15	0	22	83	15	76	2.20e-28	112
MsaG043836	MtrunA17_Chr7g0237921	72.881	59	16	0	28	86	72	130	3.03e-28	112
MsaG043836	MtrunA17_Chr1g0188851	69.697	66	20	0	21	86	32	97	3.84e-28	110
MsaG043836	MtrunA17_Chr3g0117601	69.355	62	19	0	21	82	50	111	5.01e-28	111
MsaG043836	MtrunA17_Chr4g0061761	84.615	52	8	0	31	82	39	90	6.07e-28	110
MsaG043836	MtrunA17_Chr4g0010151	72.414	58	16	0	29	86	79	136	8.11e-28	111
MsaG043836	MtrunA17_Chr3g0126201	66.667	69	23	0	20	88	39	107	1.23e-27	110
MsaG043836	MtrunA17_Chr1g0177251	75.862	58	14	0	29	86	9	66	5.92e-27	107
MsaG043836	MtrunA17_Chr8g0341671	74.545	55	14	0	32	86	20	74	4.04e-26	103
MsaG043836	MtrunA17_Chr2g0282511	82.000	50	9	0	31	80	44	93	5.21e-26	105
MsaG043836	MtrunA17_Chr8g0374111	72.727	55	15	0	32	86	29	83	1.14e-25	102
MsaG043836	MtrunA17_Chr2g0308011	78.431	51	11	0	30	80	35	85	2.32e-25	101
MsaG043836	MtrunA17_Chr7g0217581	57.534	73	31	0	11	83	211	283	6.18e-25	105
MsaG043836	MtrunA17_Chr4g0042481	51.190	84	41	0	7	90	97	180	7.31e-25	104
MsaG043836	MtrunA17_Chr2g0283811	50.575	87	41	1	25	109	38	124	9.96e-25	98.2
MsaG043836	MtrunA17_Chr6g0460731	48.936	94	35	2	7	87	58	151	1.69e-24	102
MsaG043836	MtrunA17_Chr7g0254161	55.000	80	30	1	14	87	77	156	1.83e-24	103
MsaG043836	MtrunA17_Chr6g0460721	47.872	94	36	2	7	87	51	144	3.18e-24	100
MsaG043836	MtrunA17_Chr2g0282051	63.492	63	22	1	26	88	40	101	4.16e-24	99.8
MsaG043836	MtrunA17_Chr4g0047761	68.421	57	17	1	32	88	72	127	2.41e-23	98.6
MsaG043836	MtrunA17_Chr5g0417601	56.757	74	31	1	14	87	122	194	3.47e-23	99.0
MsaG043836	MtrunA17_Chr3g0092111	49.412	85	37	1	7	85	105	189	7.68e-23	99.0
MsaG043836	MtrunA17_Chr8g0355261	46.914	81	43	0	6	86	92	172	9.92e-23	98.2
MsaG043836	MtrunA17_Chr6g0453321	48.889	90	41	2	20	104	124	213	1.34e-22	98.2
MsaG043836	MtrunA17_Chr5g0417571	57.143	70	30	0	14	83	120	189	3.72e-22	95.1
MsaG043836	MtrunA17_Chr5g0417551	46.914	81	35	1	13	85	100	180	1.96e-19	88.2
MsaG043836	MtrunA17_Chr5g0417561	47.561	82	35	1	22	95	101	182	1.01e-18	85.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG043836	AT5G65590.1	37.571	354	149	14	4	338	16	316	3.34e-56	186
MsaG043836	AT5G60200.1	47.059	119	53	2	14	122	35	153	3.69e-31	118
MsaG043836	AT1G51700.1	62.821	78	28	1	32	109	33	109	4.46e-31	116
MsaG043836	AT2G37590.1	75.000	60	15	0	29	88	86	145	4.56e-30	117
MsaG043836	AT5G60850.1	60.759	79	31	0	32	110	51	129	1.97e-29	115
MsaG043836	AT3G52440.1	59.551	89	29	1	29	110	22	110	2.61e-29	113
MsaG043836	AT1G07640.1	81.818	55	10	0	32	86	21	75	3.27e-29	114
MsaG043836	AT3G52440.2	59.551	89	29	1	29	110	41	129	4.95e-29	113
MsaG043836	AT3G45610.1	61.538	78	29	1	9	86	18	94	5.04e-29	112
MsaG043836	AT1G07640.2	81.818	55	10	0	32	86	77	131	5.13e-29	114
MsaG043836	AT1G07640.3	81.818	55	10	0	32	86	85	139	6.46e-29	114
MsaG043836	AT2G28810.2	81.132	53	10	0	31	83	76	128	8.82e-29	114
MsaG043836	AT3G21270.1	84.615	52	8	0	32	83	29	80	1.00e-28	110
MsaG043836	AT2G28510.1	54.639	97	39	1	34	130	50	141	1.01e-28	112
MsaG043836	AT3G55370.1	66.667	69	23	0	29	97	73	141	1.19e-28	113
MsaG043836	AT2G28810.1	81.132	53	10	0	31	83	93	145	1.22e-28	113
MsaG043836	AT3G55370.2	66.667	69	23	0	29	97	73	141	1.28e-28	114
MsaG043836	AT3G55370.3	66.667	69	23	0	29	97	118	186	1.84e-28	114
MsaG043836	AT5G66940.1	46.512	129	49	5	25	153	26	134	4.98e-28	109
MsaG043836	AT1G21340.1	63.380	71	24	1	23	91	27	97	5.57e-28	110
MsaG043836	AT5G02460.1	74.138	58	15	0	29	86	92	149	6.59e-28	112
MsaG043836	AT4G38000.1	80.357	56	11	0	31	86	40	95	7.76e-28	109
MsaG043836	AT4G24060.1	56.667	90	39	0	21	110	42	131	1.11e-27	111
MsaG043836	AT3G50410.1	71.429	63	17	1	24	86	23	84	1.72e-27	108
MsaG043836	AT1G28310.1	75.439	57	14	0	32	88	27	83	2.53e-27	109
MsaG043836	AT1G28310.2	75.439	57	14	0	32	88	51	107	3.66e-27	109
MsaG043836	AT4G21050.1	74.545	55	14	0	34	88	26	80	4.94e-27	106
MsaG043836	AT3G61850.2	71.831	71	15	2	23	93	55	120	5.18e-27	108
MsaG043836	AT3G61850.3	71.831	71	15	2	23	93	55	120	5.18e-27	108
MsaG043836	AT3G61850.1	71.831	71	15	2	23	93	67	132	6.13e-27	108
MsaG043836	AT3G61850.5	71.831	71	15	2	23	93	55	120	7.72e-27	108
MsaG043836	AT3G61850.4	71.831	71	15	2	23	93	67	132	9.59e-27	108
MsaG043836	AT5G62940.1	82.000	50	9	0	33	82	74	123	6.60e-26	106
MsaG043836	AT4G00940.1	79.630	54	11	0	34	87	70	123	1.04e-25	104
MsaG043836	AT4G00940.3	79.630	54	11	0	34	87	70	123	1.04e-25	104
MsaG043836	AT4G00940.2	79.630	54	11	0	34	87	70	123	1.04e-25	104
MsaG043836	AT1G64620.1	68.852	61	19	0	21	81	38	98	6.83e-25	103
MsaG043836	AT2G46590.1	73.333	60	14	1	20	79	58	115	1.17e-24	103
MsaG043836	AT2G46590.2	73.333	60	14	1	20	79	70	127	1.37e-24	103
MsaG043836	AT5G62430.1	41.818	110	64	0	2	111	24	133	1.29e-23	99.4
MsaG043836	AT4G21040.1	64.062	64	23	0	34	97	27	90	1.79e-23	97.4
MsaG043836	AT2G34140.1	57.143	70	28	1	18	85	42	111	2.24e-23	95.5
MsaG043836	AT3G47500.1	54.930	71	32	0	13	83	91	161	4.67e-23	99.8
MsaG043836	AT1G29160.1	56.716	67	29	0	19	85	49	115	1.58e-22	93.2
MsaG043836	AT1G26790.1	57.143	70	28	1	18	85	95	164	1.65e-22	97.4
MsaG043836	AT4G21080.1	73.077	52	14	0	34	85	27	78	4.75e-22	94.0
MsaG043836	AT5G39660.3	61.538	65	24	1	19	83	126	189	5.95e-22	96.7
MsaG043836	AT5G39660.1	61.538	65	24	1	19	83	126	189	5.95e-22	96.7
MsaG043836	AT5G39660.2	61.538	65	24	1	19	83	126	189	5.95e-22	96.7
MsaG043836	AT1G69570.1	67.925	53	17	0	31	83	131	183	7.90e-22	95.9
MsaG043836	AT1G47655.1	71.429	49	14	0	32	80	29	77	9.44e-22	92.0
MsaG043836	AT4G21030.1	51.515	66	29	2	34	97	23	87	3.87e-13	67.8

Find 61 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATCTTAGTGTTTGCATTAA+TGG	0.144786	8:+51864413	MsaT043836.1:CDS
AATGGAGGTGGATTTATTAA+TGG	0.224509	8:+51864017	MsaT043836.1:CDS
GAGAATTGGTTATAGTAAAA+TGG	0.242887	8:-51863888	None:intergenic
GGATATAAATTTAAACCATT+TGG	0.271968	8:-51863981	None:intergenic
TGAAGAAGAGTACTTATTAA+TGG	0.299609	8:-51863802	None:intergenic
TCAAGATTCTGAAACAAAAT+AGG	0.312862	8:-51864266	None:intergenic
GCAAAACATGCAGAAGATAT+TGG	0.321728	8:+51863691	MsaT043836.1:CDS
AATGGTGATCATGATCAAAA+TGG	0.333621	8:+51864431	MsaT043836.1:CDS
GAAGAGAAGGGTAATGATAA+AGG	0.339449	8:-51863861	None:intergenic
GTATTGAATCATTGAGTTGT+AGG	0.351509	8:+51864126	MsaT043836.1:CDS
AACAACAACTGGATTAATAA+TGG	0.361191	8:+51864455	MsaT043836.1:CDS
CATTAGGGCAAAGCAGTATA+TGG	0.371036	8:-51864512	None:intergenic
GGTGCAAGTGAATGGTTCTT+TGG	0.371222	8:+51864347	MsaT043836.1:CDS
CCTTGTTTGAAGATAATAAC+AGG	0.384597	8:+51864192	MsaT043836.1:CDS
ATCAAAATGGAAACAACAAC+TGG	0.385969	8:+51864444	MsaT043836.1:CDS
TATCCTTTCCCTTCTTCAAA+TGG	0.389837	8:+51863999	MsaT043836.1:CDS
TAATAATGGTGTTCATGCTT+GGG	0.391047	8:+51864469	MsaT043836.1:CDS
CTCCACCAATGGAAGAGAAT+TGG	0.392888	8:-51863902	None:intergenic
AATTTAAACCATTTGGATCA+AGG	0.394686	8:-51863974	None:intergenic
TTCCCTTCTTCAAATGGAGG+TGG	0.398768	8:+51864005	MsaT043836.1:CDS
TTTCAAGTTGGTGGTGGTGC+TGG	0.445544	8:+51864308	MsaT043836.1:CDS
TATAACCAATTCTCTTCCAT+TGG	0.446973	8:+51863897	MsaT043836.1:CDS
GAAGGGTAATGATAAAGGTA+AGG	0.450658	8:-51863856	None:intergenic
TGCAGAAGATATTGGACAAA+TGG	0.451403	8:+51863699	MsaT043836.1:CDS
AACCAATTCTCTTCCATTGG+TGG	0.456714	8:+51863900	MsaT043836.1:CDS
CTAAGATCAGTAGTTGTTGC+AGG	0.461438	8:-51864398	None:intergenic
TTAATAATGGTGTTCATGCT+TGG	0.476692	8:+51864468	MsaT043836.1:CDS
TTTCAGAAGAAGAACCTTGT+TGG	0.487451	8:-51863557	None:intergenic
GGAAATGAAAATGCAATTCA+AGG	0.492654	8:+51864041	MsaT043836.1:CDS
ATCATTGAGTTGTAGGAACC+AGG	0.495806	8:+51864133	MsaT043836.1:CDS
AAGAACCAAGATGAAAATCA+AGG	0.498393	8:-51863830	None:intergenic
AATCCACCTCCATTTGAAGA+AGG	0.498975	8:-51864008	None:intergenic
GTGTTTGGAGAATCACATCT+TGG	0.505256	8:-51863618	None:intergenic
GGAAAGAAGGTGCAAGTGAA+TGG	0.511820	8:+51864339	MsaT043836.1:CDS
GGAGGTGGATTTATTAATGG+TGG	0.512038	8:+51864020	MsaT043836.1:CDS
GAAGCTTCAAATGCAAATCC+TGG	0.518207	8:-51864151	None:intergenic
TTGCGTAACGTTCCGATAGG+TGG	0.519722	8:+51863729	MsaT043836.1:CDS
TTCTGAAACAAAATAGGTTG+AGG	0.522960	8:-51864260	None:intergenic
GTGGTGGTGCTGGTGATTCA+AGG	0.525382	8:+51864318	MsaT043836.1:CDS
CCTTTCCCTTCTTCAAATGG+AGG	0.533783	8:+51864002	MsaT043836.1:CDS
TCAGAATCTTGAGATTTCAA+AGG	0.543309	8:+51864277	MsaT043836.1:CDS
GCTGAGATGTTTCAAGTTGG+TGG	0.546166	8:+51864299	MsaT043836.1:CDS
GAATTCTTATTCATCAGTGA+TGG	0.547652	8:+51864373	MsaT043836.1:CDS
TTTCTACAACCACCACCTAT+CGG	0.547678	8:-51863741	None:intergenic
GATAATAACAGGAAAGAGAG+TGG	0.551054	8:+51864203	MsaT043836.1:CDS
CGTAACGTTCCGATAGGTGG+TGG	0.551463	8:+51863732	MsaT043836.1:CDS
CCTGTTATTATCTTCAAACA+AGG	0.552716	8:-51864192	None:intergenic
ATCCACCTCCATTTGAAGAA+GGG	0.555981	8:-51864007	None:intergenic
GAGATGTTTCAAGTTGGTGG+TGG	0.563036	8:+51864302	MsaT043836.1:CDS
AAGGGTAATGATAAAGGTAA+GGG	0.574636	8:-51863855	None:intergenic
TACTTATTAATGGCTTGAGA+TGG	0.577342	8:-51863792	None:intergenic
TGAACTTGAAACTCCACCAA+TGG	0.581179	8:-51863913	None:intergenic
AAGGCTGAGATGTTTCAAGT+TGG	0.583200	8:+51864296	MsaT043836.1:CDS
GCTGGTGATTCAAGGAAAGA+AGG	0.609961	8:+51864326	MsaT043836.1:CDS
CCAAGATGAAAATCAAGGGA+AGG	0.612013	8:-51863825	None:intergenic
AATAATGGTGTTCATGCTTG+GGG	0.619834	8:+51864470	MsaT043836.1:CDS
AGAACCAAGATGAAAATCAA+GGG	0.621487	8:-51863829	None:intergenic
CCTCCATTTGAAGAAGGGAA+AGG	0.627858	8:-51864002	None:intergenic
TCGTTGCGTAACGTTCCGAT+AGG	0.633139	8:+51863726	MsaT043836.1:CDS
AGAAGATATTGGACAAATGG+TGG	0.635966	8:+51863702	MsaT043836.1:CDS
CAAGATCATGAAAACCAACA+AGG	0.656147	8:+51863543	MsaT043836.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	51863516	51864532	51863516	ID=MsaG043836
Chr8	mRNA	51863516	51864532	51863516	ID=MsaT043836.1;Parent=MsaG043836
Chr8	exon	51863516	51864532	51863516	ID=MsaT043836.1.exon1;Parent=MsaT043836.1
Chr8	CDS	51863516	51864532	51863516	ID=cds.MsaT043836.1;Parent=MsaT043836.1

Gene Sequence

>MsaT043836.1

ATGGTGGCACCAAATCACAAAAACACACAAGATCATGAAAACCAACAAGGTTCTTCTTCTGAAACCAAGATAACAGATCAACAAAAAGTTGTAGTAAAATGTCCAAGATGTGATTCTCCAAACACAAAATTCTGTTACTACAACAACTACAGTCTCACTCAACCAAGACATTTCTGCAAAACATGCAGAAGATATTGGACAAATGGTGGATCGTTGCGTAACGTTCCGATAGGTGGTGGTTGTAGAAAGAAACAAAAACTCAAACACTCATCTACACCATCTCAAGCCATTAATAAGTACTCTTCTTCACCTTCCCTTGATTTTCATCTTGGTTCTTTACCCTTACCTTTATCATTACCCTTCTCTTCAAAACCATTTTACTATAACCAATTCTCTTCCATTGGTGGAGTTTCAAGTTCAAACACTTGTGTTTCTACTACAAGTGCTTCAAGTTTTCACCTTGATCCAAATGGTTTAAATTTATATCCTTTCCCTTCTTCAAATGGAGGTGGATTTATTAATGGTGGAAATGAAAATGCAATTCAAGGAATGAACTTTATGAATGTGAGTACTAGTGCTAATAATGCTAATTGCACTAGTCTTGCTTCTAGTATTGAATCATTGAGTTGTAGGAACCAGGATTTGCATTTGAAGCTTCAGCAGCAGAGATTAGCAACCTTGTTTGAAGATAATAACAGGAAAGAGAGTGGAACTGTTTTGCTTTCTCAGGTTAGCATTGAAAAGCCTCAACCTATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGAGATGTTTCAAGTTGGTGGTGGTGCTGGTGATTCAAGGAAAGAAGGTGCAAGTGAATGGTTCTTTGGTATGAATTCTTATTCATCAGTGATGGCTCCTGCAACAACTACTGATCTTAGTGTTTGCATTAATGGTGATCATGATCAAAATGGAAACAACAACTGGATTAATAATGGTGTTCATGCTTGGGGTGATGTGCAGCAGCAGCAGCCATATACTGCTTTGCCCTAA

Protein sequence

>MsaT043836.1

MVAPNHKNTQDHENQQGSSSETKITDQQKVVVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPIGGGCRKKQKLKHSSTPSQAINKYSSSPSLDFHLGSLPLPLSLPFSSKPFYYNQFSSIGGVSSSNTCVSTTSASSFHLDPNGLNLYPFPSSNGGGFINGGNENAIQGMNFMNVSTSANNANCTSLASSIESLSCRNQDLHLKLQQQRLATLFEDNNRKESGTVLLSQVSIEKPQPILFQNLEISKAEMFQVGGGAGDSRKEGASEWFFGMNSYSSVMAPATTTDLSVCINGDHDQNGNNNWINNGVHAWGDVQQQQPYTALP*