AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG044037

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044037 MtrunA17_Chr2g0281181 90.654 107 10 0 113 219 378 484 2.31e-59 196
MsaG044037 MtrunA17_Chr7g0228891 84.615 91 14 0 1 91 1 91 3.19e-48 161
MsaG044037 MtrunA17_Chr3g0110351 71.429 91 26 0 1 91 1 91 6.25e-38 135
MsaG044037 MtrunA17_Chr5g0434571 71.429 91 26 0 1 91 37 127 8.98e-38 136
MsaG044037 MtrunA17_Chr4g0057031 67.033 91 30 0 1 91 1 91 1.51e-35 128
MsaG044037 MtrunA17_Chr1g0187761 61.364 88 34 0 1 88 1 88 6.51e-32 118
MsaG044037 MtrunA17_Chr8g0349261 65.957 94 22 3 1 88 1 90 1.33e-31 119
MsaG044037 MtrunA17_Chr7g0261281 62.500 88 33 0 1 88 1 88 1.72e-31 118
MsaG044037 MtrunA17_Chr7g0217741 62.500 88 33 0 1 88 1 88 2.11e-31 118
MsaG044037 MtrunA17_Chr6g0453471 63.636 88 32 0 1 88 1 88 9.21e-31 117
MsaG044037 MtrunA17_Chr4g0042611 60.227 88 35 0 1 88 1 88 1.33e-30 110
MsaG044037 MtrunA17_Chr1g0203411 61.364 88 34 0 1 88 1 88 2.45e-30 115
MsaG044037 MtrunA17_Chr2g0323411 62.500 88 33 0 1 88 1 88 2.87e-30 115
MsaG044037 MtrunA17_Chr1g0167691 59.091 88 36 0 1 88 1 88 3.10e-30 114
MsaG044037 MtrunA17_Chr2g0294811 60.227 88 35 0 1 88 1 88 3.40e-30 110
MsaG044037 MtrunA17_Chr3g0131121 59.091 88 36 0 1 88 1 88 5.94e-30 114
MsaG044037 MtrunA17_Chr7g0271241 62.500 88 33 0 1 88 1 88 7.14e-30 115
MsaG044037 MtrunA17_Chr4g0039971 62.500 88 33 0 1 88 2 89 7.59e-30 115
MsaG044037 MtrunA17_Chr3g0115821 60.227 88 35 0 1 88 1 88 8.22e-30 115
MsaG044037 MtrunA17_Chr1g0193371 61.364 88 34 0 1 88 1 88 1.24e-29 115
MsaG044037 MtrunA17_Chr4g0042671 62.500 88 33 0 1 88 1 88 1.43e-29 115
MsaG044037 MtrunA17_Chr4g0037141 56.818 88 38 0 1 88 1 88 2.25e-29 112
MsaG044037 MtrunA17_Chr7g0275911 56.818 88 38 0 1 88 1 88 1.08e-28 110
MsaG044037 MtrunA17_Chr1g0194951 61.364 88 34 0 1 88 1 88 1.54e-28 112
MsaG044037 MtrunA17_Chr8g0346561 56.818 88 38 0 1 88 1 88 1.58e-28 110
MsaG044037 MtrunA17_Chr7g0274581 53.409 88 41 0 1 88 1 88 1.92e-28 108
MsaG044037 MtrunA17_Chr5g0410961 56.044 91 40 0 1 91 1 91 4.51e-28 110
MsaG044037 MtrunA17_Chr8g0342531 52.083 96 46 0 1 96 1 96 5.52e-28 105
MsaG044037 MtrunA17_Chr8g0385321 54.545 88 40 0 1 88 1 88 6.68e-28 109
MsaG044037 MtrunA17_Chr1g0167661 59.091 88 36 0 1 88 1 88 7.33e-28 107
MsaG044037 MtrunA17_Chr8g0342511 56.322 87 38 0 1 87 1 87 9.33e-28 103
MsaG044037 MtrunA17_Chr2g0330041 56.250 96 42 0 1 96 1 96 9.43e-28 110
MsaG044037 MtrunA17_Chr2g0281071 59.551 89 35 1 1 88 1 89 1.03e-27 109
MsaG044037 MtrunA17_Chr4g0068061 57.955 88 37 0 1 88 1 88 1.09e-27 109
MsaG044037 MtrunA17_Chr4g0070641 57.955 88 37 0 1 88 1 88 1.64e-27 104
MsaG044037 MtrunA17_Chr5g0435101 55.814 86 38 0 3 88 2 87 1.75e-27 105
MsaG044037 MtrunA17_Chr4g0048511 60.674 89 34 1 1 88 1 89 3.28e-27 108
MsaG044037 MtrunA17_Chr2g0311221 57.447 94 32 2 2 91 4 93 3.88e-27 107
MsaG044037 MtrunA17_Chr7g0270371 96.226 53 2 0 220 272 240 292 6.76e-27 108
MsaG044037 MtrunA17_Chr8g0342461 46.903 113 58 2 1 112 1 112 8.44e-27 102
MsaG044037 MtrunA17_Chr7g0270891 59.091 88 36 0 1 88 1 88 1.15e-26 107
MsaG044037 MtrunA17_Chr2g0323351 54.255 94 35 2 1 90 1 90 1.67e-26 104
MsaG044037 MtrunA17_Chr4g0070611 57.955 88 37 0 1 88 1 88 1.72e-26 105
MsaG044037 MtrunA17_Chr8g0342471 53.763 93 42 1 1 92 1 93 1.75e-26 101
MsaG044037 MtrunA17_Chr3g0121241 59.524 84 34 0 5 88 35 118 2.65e-26 104
MsaG044037 MtrunA17_Chr4g0058631 58.242 91 38 0 1 91 1 91 4.01e-26 105
MsaG044037 MtrunA17_Chr7g0246591 90.566 53 5 0 220 272 306 358 6.58e-26 106
MsaG044037 MtrunA17_Chr4g0060721 54.545 88 40 0 1 88 2 89 7.07e-26 104
MsaG044037 MtrunA17_Chr1g0194201 92.453 53 4 0 220 272 240 292 8.03e-26 105
MsaG044037 MtrunA17_Chr3g0103281 55.682 88 39 0 1 88 1 88 8.80e-26 103
MsaG044037 MtrunA17_Chr8g0342541 53.125 96 45 0 1 96 1 96 8.87e-26 104
MsaG044037 MtrunA17_Chr7g0217221 55.556 90 40 0 1 90 1 90 1.25e-25 102
MsaG044037 MtrunA17_Chr1g0193801 57.955 88 37 0 1 88 1 88 1.27e-25 104
MsaG044037 MtrunA17_Chr6g0453211 56.818 88 38 0 1 88 1 88 1.30e-25 103
MsaG044037 MtrunA17_Chr3g0117091 58.242 91 38 0 1 91 1 91 1.49e-25 103
MsaG044037 MtrunA17_Chr4g0022931 51.613 93 36 3 1 88 1 89 1.91e-25 102
MsaG044037 MtrunA17_Chr1g0193081 90.566 53 5 0 220 272 240 292 4.04e-25 103
MsaG044037 MtrunA17_Chr3g0092401 54.545 88 40 0 1 88 2 89 4.17e-25 101
MsaG044037 MtrunA17_Chr2g0323321 53.261 92 34 3 1 88 1 87 4.61e-25 96.7
MsaG044037 MtrunA17_Chr7g0269831 59.091 88 36 0 1 88 1 88 4.75e-25 102
MsaG044037 MtrunA17_Chr2g0277011 90.566 53 5 0 220 272 255 307 5.02e-25 103
MsaG044037 MtrunA17_Chr8g0342521 52.083 96 46 0 1 96 1 96 6.09e-25 102
MsaG044037 MtrunA17_Chr4g0022901 51.613 93 36 3 1 88 1 89 6.93e-25 100
MsaG044037 MtrunA17_Chr1g0211161 57.303 89 38 0 3 91 4 92 8.09e-25 99.4
MsaG044037 MtrunA17_Chr7g0254411 55.682 88 39 0 1 88 1 88 1.21e-24 100
MsaG044037 MtrunA17_Chr1g0151941 50.538 93 37 2 1 88 1 89 1.32e-24 99.4
MsaG044037 MtrunA17_Chr8g0342481 52.577 97 45 1 1 96 1 97 2.34e-24 101
MsaG044037 MtrunA17_Chr2g0309911 52.083 96 45 1 1 96 1 95 2.54e-24 99.8
MsaG044037 MtrunA17_Chr2g0320011 90.566 53 5 0 220 272 253 305 2.60e-24 101
MsaG044037 MtrunA17_Chr4g0022911 49.462 93 38 3 1 88 1 89 2.76e-24 99.4
MsaG044037 MtrunA17_Chr4g0044421 55.172 87 38 1 3 88 2 88 2.77e-24 96.7
MsaG044037 MtrunA17_Chr6g0452271 54.348 92 34 2 1 88 1 88 4.42e-24 99.4
MsaG044037 MtrunA17_Chr8g0350311 86.792 53 7 0 220 272 304 356 5.73e-24 100
MsaG044037 MtrunA17_Chr5g0395221 53.571 84 39 0 5 88 5 88 7.23e-24 92.4
MsaG044037 MtrunA17_Chr2g0284091 86.792 53 7 0 220 272 205 257 8.23e-24 99.4
MsaG044037 MtrunA17_Chr5g0400821 50.538 93 37 2 1 88 1 89 1.18e-23 97.8
MsaG044037 MtrunA17_Chr4g0022891 51.136 88 43 0 1 88 1 88 1.40e-23 96.3
MsaG044037 MtrunA17_Chr5g0395281 54.545 88 40 0 1 88 1 88 1.70e-23 97.4
MsaG044037 MtrunA17_Chr4g0054391 51.613 93 36 2 1 88 1 89 1.87e-23 97.1
MsaG044037 MtrunA17_Chr8g0387421 50.549 91 45 0 1 91 1 91 2.23e-23 97.4
MsaG044037 MtrunA17_Chr5g0397231 52.273 88 42 0 1 88 1 88 3.01e-23 97.1
MsaG044037 MtrunA17_Chr3g0135311 49.462 93 38 2 1 88 1 89 5.92e-23 96.7
MsaG044037 MtrunA17_Chr4g0032401 58.442 77 32 0 12 88 17 93 6.54e-23 96.3
MsaG044037 MtrunA17_Chr1g0152011 50.538 93 37 2 1 88 1 89 6.58e-23 96.3
MsaG044037 MtrunA17_Chr2g0327351 50.538 93 37 2 1 88 1 89 7.73e-23 95.9
MsaG044037 MtrunA17_Chr4g0028311 50.538 93 37 2 1 88 1 89 1.02e-22 95.5
MsaG044037 MtrunA17_Chr7g0264641 49.462 93 38 2 1 88 1 89 1.25e-22 94.4
MsaG044037 MtrunA17_Chr6g0487491 50.526 95 38 2 1 90 1 91 1.48e-22 94.0
MsaG044037 MtrunA17_Chr4g0072751 48.387 93 39 2 1 88 1 89 7.80e-22 93.6
MsaG044037 MtrunA17_Chr4g0022881 47.727 88 46 0 1 88 1 88 1.20e-21 90.9
MsaG044037 MtrunA17_Chr2g0328771 55.844 77 34 0 12 88 20 96 2.19e-21 91.7
MsaG044037 MtrunA17_Chr6g0450101 44.898 98 52 1 1 96 1 98 1.16e-20 87.4
MsaG044037 MtrunA17_Chr7g0228231 49.412 85 43 0 12 96 14 98 1.92e-20 87.0
MsaG044037 MtrunA17_Chr5g0417821 51.899 79 38 0 10 88 5 83 4.24e-20 87.8
MsaG044037 MtrunA17_Chr3g0099141 45.455 88 40 2 8 91 36 119 6.95e-20 83.6
MsaG044037 MtrunA17_Chr1g0203441 52.809 89 41 1 1 88 1 89 7.82e-20 86.7
MsaG044037 MtrunA17_Chr3g0088461 51.852 81 39 0 8 88 18 98 1.14e-19 87.4
MsaG044037 MtrunA17_Chr8g0354661 52.439 82 39 0 10 91 35 116 2.25e-19 87.8
MsaG044037 MtrunA17_Chr6g0470971 52.500 80 38 0 9 88 11 90 1.17e-18 83.6
MsaG044037 MtrunA17_Chr3g0080861 48.780 82 42 0 10 91 35 116 4.49e-18 84.0
MsaG044037 MtrunA17_Chr1g0186061 50.000 76 38 0 13 88 21 96 4.67e-18 81.6
MsaG044037 MtrunA17_Chr1g0168661 50.000 76 38 0 13 88 22 97 8.58e-18 80.9
MsaG044037 MtrunA17_Chr3g0099131 45.349 86 39 2 10 91 39 120 1.03e-17 82.8
MsaG044037 MtrunA17_Chr4g0055981 51.190 84 33 2 9 88 52 131 1.34e-17 79.7
MsaG044037 MtrunA17_Chr1g0209661 47.500 80 42 0 12 91 27 106 2.73e-17 80.1
MsaG044037 MtrunA17_Chr2g0293911 46.429 84 45 0 8 91 20 103 4.01e-17 80.1
MsaG044037 MtrunA17_Chr1g0194291 45.238 84 46 0 8 91 17 100 4.71e-17 79.0
MsaG044037 MtrunA17_Chr6g0453751 43.750 96 36 3 11 94 19 108 4.88e-17 75.9
MsaG044037 MtrunA17_Chr1g0194301 44.048 84 47 0 8 91 29 112 8.59e-17 78.6
MsaG044037 MtrunA17_Chr1g0154031 47.619 84 36 2 12 91 76 155 1.58e-16 79.0
MsaG044037 MtrunA17_Chr7g0240821 53.425 73 34 0 16 88 5 77 2.14e-16 76.3
MsaG044037 MtrunA17_Chr4g0068921 45.238 84 46 0 8 91 20 103 4.31e-16 74.7
MsaG044037 MtrunA17_Chr2g0322521 49.398 83 42 0 9 91 26 108 1.25e-15 76.3
MsaG044037 MtrunA17_Chr5g0425591 42.697 89 41 3 10 94 7 89 1.61e-15 70.5
MsaG044037 MtrunA17_Chr1g0180391 44.444 81 45 0 11 91 18 98 4.33e-15 72.8
MsaG044037 MtrunA17_Chr5g0434831 48.718 78 40 0 11 88 6 83 5.08e-15 71.6
MsaG044037 MtrunA17_Chr2g0327821 43.750 80 45 0 12 91 6 85 5.31e-15 72.8
MsaG044037 MtrunA17_Chr7g0273601 47.368 76 28 1 208 271 248 323 8.74e-15 74.3
MsaG044037 MtrunA17_Chr1g0192411 41.111 90 45 2 1 86 1 86 9.04e-15 73.9
MsaG044037 MtrunA17_Chr7g0247131 71.739 46 13 0 43 88 9 54 9.92e-15 72.4
MsaG044037 MtrunA17_Chr5g0396361 44.000 75 30 1 209 271 282 356 1.14e-14 73.9
MsaG044037 MtrunA17_Chr7g0220341 45.783 83 43 1 8 88 21 103 2.04e-14 71.6
MsaG044037 MtrunA17_Chr8g0343831 45.455 77 42 0 12 88 8 84 2.38e-14 71.2
MsaG044037 MtrunA17_Chr5g0434931 47.436 78 41 0 11 88 34 111 2.92e-14 71.2
MsaG044037 MtrunA17_Chr2g0286421 41.860 86 38 1 198 271 233 318 2.98e-14 72.4
MsaG044037 MtrunA17_Chr8g0360111 47.436 78 41 0 11 88 24 101 3.20e-14 70.9
MsaG044037 MtrunA17_Chr1g0191221 44.737 76 30 1 208 271 263 338 4.34e-14 72.0
MsaG044037 MtrunA17_Chr4g0066691 44.737 76 30 1 208 271 245 320 4.47e-14 72.0
MsaG044037 MtrunA17_Chr4g0030881 41.860 86 43 1 13 91 8 93 4.67e-14 70.5
MsaG044037 MtrunA17_Chr5g0434911 45.122 82 45 0 7 88 16 97 5.31e-14 70.5
MsaG044037 MtrunA17_Chr3g0131861 44.737 76 30 1 208 271 238 313 2.47e-13 69.7
MsaG044037 MtrunA17_Chr2g0317501 42.105 76 32 1 208 271 275 350 2.81e-13 69.7
MsaG044037 MtrunA17_Chr7g0228991 47.436 78 41 0 11 88 28 105 3.04e-13 68.2
MsaG044037 MtrunA17_Chr5g0434841 47.436 78 41 0 11 88 19 96 3.07e-13 68.6
MsaG044037 MtrunA17_Chr5g0440781 40.698 86 41 3 13 94 13 92 4.08e-13 66.6
MsaG044037 MtrunA17_Chr3g0122781 46.667 60 32 0 213 272 573 632 7.43e-13 68.6
MsaG044037 MtrunA17_Chr2g0293491 44.444 54 30 0 219 272 167 220 1.03e-12 67.0
MsaG044037 MtrunA17_Chr5g0440761 40.698 86 41 3 13 94 13 92 1.15e-12 66.6
MsaG044037 MtrunA17_Chr8g0377071 48.276 58 30 0 215 272 544 601 1.25e-12 67.8
MsaG044037 MtrunA17_Chr2g0324461 28.834 163 91 4 123 271 206 357 1.32e-12 67.8
MsaG044037 MtrunA17_Chr4g0051261 43.396 53 30 0 219 271 167 219 1.42e-12 66.6
MsaG044037 MtrunA17_Chr5g0441141 40.698 86 41 3 13 94 13 92 1.55e-12 66.2
MsaG044037 MtrunA17_Chr8g0385971 44.737 76 30 2 208 271 231 306 1.62e-12 67.4
MsaG044037 MtrunA17_Chr4g0002001 48.148 54 28 0 219 272 184 237 2.85e-12 65.9
MsaG044037 MtrunA17_Chr4g0030241 49.057 53 27 0 220 272 66 118 5.83e-12 63.2
MsaG044037 MtrunA17_Chr4g0040141 43.333 60 34 0 212 271 286 345 5.94e-12 65.9
MsaG044037 MtrunA17_Chr8g0348481 46.667 60 32 0 220 279 202 261 6.88e-12 65.1
MsaG044037 MtrunA17_Chr4g0057791 43.333 60 34 0 213 272 377 436 7.26e-12 65.5
MsaG044037 MtrunA17_Chr6g0486031 44.615 65 36 0 208 272 267 331 7.68e-12 65.1
MsaG044037 MtrunA17_Chr1g0187371 39.474 76 35 1 208 272 167 242 8.07e-12 64.7
MsaG044037 MtrunA17_Chr7g0248461 46.667 60 32 0 220 279 203 262 8.55e-12 64.7
MsaG044037 MtrunA17_Chr8g0369241 52.830 53 24 1 220 272 307 358 1.01e-11 65.1
MsaG044037 MtrunA17_Chr8g0383451 38.571 70 43 0 202 271 145 214 1.39e-11 64.3
MsaG044037 MtrunA17_Chr8g0387401 43.333 60 34 0 220 279 217 276 1.49e-11 64.3
MsaG044037 MtrunA17_Chr8g0390341 50.943 53 26 0 220 272 292 344 1.73e-11 64.3
MsaG044037 MtrunA17_Chr1g0201571 42.857 63 36 0 209 271 280 342 2.12e-11 63.9
MsaG044037 MtrunA17_Chr5g0397261 43.333 60 34 0 220 279 206 265 2.91e-11 63.2
MsaG044037 MtrunA17_Chr8g0378831 50.943 53 26 0 220 272 198 250 3.28e-11 63.2
MsaG044037 MtrunA17_Chr6g0453711 39.474 76 34 1 208 271 251 326 3.63e-11 63.2
MsaG044037 MtrunA17_Chr4g0030231 49.057 53 27 0 220 272 205 257 3.77e-11 62.8
MsaG044037 MtrunA17_Chr4g0061141 41.935 62 36 0 210 271 260 321 4.11e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044037 AT4G21540.2 69.811 106 32 0 113 218 169 274 6.46e-48 161
MsaG044037 AT4G21540.1 69.811 106 32 0 113 218 379 484 6.90e-46 161
MsaG044037 AT4G21534.1 71.429 105 30 0 116 220 377 481 1.87e-45 159
MsaG044037 AT4G21534.2 71.429 105 30 0 116 220 377 481 1.87e-45 159
MsaG044037 AT5G14340.1 74.725 91 23 0 1 91 13 103 2.97e-43 149
MsaG044037 AT5G16600.1 71.429 91 26 0 1 91 1 91 3.02e-38 137
MsaG044037 AT1G66230.1 68.132 91 29 0 1 91 1 91 1.02e-36 132
MsaG044037 AT3G23250.1 67.045 88 29 0 1 88 1 88 7.20e-35 127
MsaG044037 AT4G22680.1 64.835 91 32 0 1 91 1 91 1.17e-34 126
MsaG044037 AT4G12350.1 64.835 91 32 0 1 91 1 91 1.99e-33 123
MsaG044037 AT3G61250.1 65.909 88 30 0 1 88 1 88 6.24e-33 122
MsaG044037 AT1G06180.1 63.636 88 32 0 1 88 1 88 8.93e-33 120
MsaG044037 AT2G31180.1 63.636 88 32 0 1 88 1 88 1.29e-31 118
MsaG044037 AT1G16490.1 60.000 90 36 0 2 91 4 93 1.62e-31 118
MsaG044037 AT5G15310.4 62.500 88 33 0 1 88 1 88 2.43e-31 117
MsaG044037 AT3G01140.2 62.500 88 33 0 1 88 1 88 3.97e-31 119
MsaG044037 AT5G15310.1 62.500 88 33 0 1 88 1 88 6.72e-31 118
MsaG044037 AT5G15310.2 62.500 88 33 0 1 88 1 88 6.86e-31 117
MsaG044037 AT5G62320.1 58.763 97 33 1 2 91 3 99 4.48e-30 114
MsaG044037 AT1G79180.1 59.574 94 30 2 2 91 4 93 4.88e-30 115
MsaG044037 AT3G02940.2 60.227 88 35 0 1 88 1 88 5.66e-30 115
MsaG044037 AT4G09460.1 57.955 88 37 0 1 88 1 88 5.83e-30 113
MsaG044037 AT4G21440.1 32.234 273 138 8 1 260 1 239 5.89e-30 115
MsaG044037 AT4G28110.1 59.091 88 36 0 1 88 1 88 6.71e-30 114
MsaG044037 AT3G12820.1 57.447 94 40 0 3 96 5 98 7.02e-30 113
MsaG044037 AT3G02940.1 60.227 88 35 0 1 88 1 88 7.32e-30 115
MsaG044037 AT3G02940.3 60.227 88 35 0 1 88 1 88 7.32e-30 115
MsaG044037 AT5G16770.4 60.227 88 35 0 1 88 1 88 9.99e-30 114
MsaG044037 AT5G16770.3 60.227 88 35 0 1 88 1 88 9.99e-30 114
MsaG044037 AT5G16770.1 60.227 88 35 0 1 88 1 88 1.40e-29 114
MsaG044037 AT5G16770.2 60.227 88 35 0 1 88 1 88 1.40e-29 114
MsaG044037 AT1G56160.1 58.889 90 37 0 2 91 4 93 1.50e-29 113
MsaG044037 AT1G35515.1 54.545 88 40 0 1 88 1 88 2.20e-29 111
MsaG044037 AT4G38620.1 57.955 88 37 0 1 88 1 88 3.02e-29 112
MsaG044037 AT5G26660.1 61.364 88 34 0 1 88 1 88 6.69e-29 113
MsaG044037 AT5G49330.1 60.227 88 35 0 1 88 1 88 7.83e-29 112
MsaG044037 AT2G16720.1 55.682 88 39 0 1 88 1 88 1.07e-28 110
MsaG044037 AT3G13540.1 60.714 84 33 0 5 88 16 99 1.42e-28 110
MsaG044037 AT3G01140.1 61.905 84 32 0 5 88 48 131 2.34e-28 112
MsaG044037 AT5G65230.1 59.091 88 36 0 1 88 1 88 2.65e-28 110
MsaG044037 AT1G34670.1 57.955 88 37 0 1 88 1 88 2.82e-28 111
MsaG044037 AT2G47460.1 59.091 88 36 0 1 88 1 88 2.99e-28 111
MsaG044037 AT1G22640.1 54.545 88 40 0 1 88 1 88 7.65e-28 108
MsaG044037 AT1G09540.1 60.227 88 35 0 1 88 1 88 9.65e-28 110
MsaG044037 AT1G57560.2 57.955 88 37 0 1 88 1 88 1.76e-27 107
MsaG044037 AT3G62610.1 53.125 96 45 0 1 96 1 96 1.82e-27 108
MsaG044037 AT5G10280.1 57.955 88 37 0 1 88 1 88 1.88e-27 108
MsaG044037 AT5G56110.1 42.667 150 71 2 1 136 1 149 1.93e-27 108
MsaG044037 AT1G57560.1 57.955 88 37 0 1 88 1 88 2.22e-27 108
MsaG044037 AT4G01680.3 59.091 88 36 0 1 88 1 88 2.40e-27 106
MsaG044037 AT4G17785.1 56.522 92 39 1 1 91 1 92 3.69e-27 108
MsaG044037 AT4G17785.2 56.522 92 39 1 1 91 1 92 3.69e-27 108
MsaG044037 AT4G05100.1 58.065 93 30 3 1 88 1 89 4.36e-27 107
MsaG044037 AT4G34990.1 55.682 88 39 0 1 88 1 88 7.53e-27 105
MsaG044037 AT3G13890.2 54.167 96 44 0 1 96 1 96 1.29e-26 107
MsaG044037 AT4G01680.1 59.091 88 36 0 1 88 1 88 1.63e-26 106
MsaG044037 AT3G47600.1 56.818 88 38 0 1 88 1 88 1.76e-26 106
MsaG044037 AT1G08810.1 55.556 90 40 0 1 90 1 90 3.65e-26 104
MsaG044037 AT5G14640.1 94.340 53 3 0 220 272 239 291 4.37e-26 106
MsaG044037 AT5G14640.2 94.340 53 3 0 220 272 239 291 4.37e-26 106
MsaG044037 AT5G62470.2 55.682 88 39 0 1 88 1 88 4.55e-26 105
MsaG044037 AT3G05840.2 92.453 53 4 0 220 272 238 290 8.88e-26 105
MsaG044037 AT3G05840.1 92.453 53 4 0 220 272 238 290 8.88e-26 105
MsaG044037 AT5G26751.1 92.453 53 4 0 220 272 234 286 1.14e-25 105
MsaG044037 AT1G09840.11 88.679 53 6 0 220 272 121 173 2.86e-25 102
MsaG044037 AT1G74650.1 55.682 88 39 0 1 88 1 88 3.99e-25 102
MsaG044037 AT1G57870.1 90.566 53 5 0 220 272 247 299 5.08e-25 103
MsaG044037 AT1G57870.4 90.566 53 5 0 220 272 247 299 5.08e-25 103
MsaG044037 AT1G57870.2 90.566 53 5 0 220 272 247 299 5.08e-25 103
MsaG044037 AT4G18710.2 88.679 53 6 0 220 272 199 251 5.30e-25 101
MsaG044037 AT1G57870.3 90.566 53 5 0 220 272 247 299 6.07e-25 103
MsaG044037 AT3G28910.1 55.556 90 40 0 1 90 1 90 6.48e-25 102
MsaG044037 AT1G74080.1 54.545 88 40 0 1 88 1 88 6.60e-25 102
MsaG044037 AT5G07690.1 53.409 88 41 0 1 88 1 88 7.71e-25 102
MsaG044037 AT5G62470.1 55.682 88 38 1 1 88 1 87 1.13e-24 101
MsaG044037 AT5G61420.2 52.273 88 42 0 1 88 1 88 1.18e-24 102
MsaG044037 AT1G09840.3 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.7 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.10 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.6 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.4 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.1 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.9 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.5 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.8 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G09840.2 88.679 53 6 0 220 272 248 300 1.20e-24 102
MsaG044037 AT1G79180.2 44.715 123 35 2 2 91 4 126 2.98e-24 100
MsaG044037 AT4G18710.1 88.679 53 6 0 220 272 205 257 3.04e-24 100
MsaG044037 AT5G60890.1 52.273 88 42 0 1 88 1 88 3.60e-24 99.4
MsaG044037 AT3G12720.1 53.125 96 44 1 1 96 12 106 3.92e-24 99.4
MsaG044037 AT1G06390.2 88.679 53 6 0 220 272 235 287 7.20e-24 100
MsaG044037 AT1G06390.1 88.679 53 6 0 220 272 235 287 7.20e-24 100
MsaG044037 AT2G30980.1 88.679 53 6 0 220 272 237 289 7.53e-24 100
MsaG044037 AT3G13890.1 49.524 105 44 1 1 96 1 105 8.37e-24 99.4
MsaG044037 AT3G49690.1 51.613 93 36 2 1 88 1 89 9.67e-24 98.6
MsaG044037 AT4G00720.1 83.019 53 9 0 220 272 303 355 1.08e-23 100
MsaG044037 AT5G65790.1 50.538 93 37 2 1 88 1 89 1.10e-23 99.4
MsaG044037 AT4G01680.2 52.000 100 36 1 1 88 1 100 3.52e-23 97.4
MsaG044037 AT2G36890.1 50.538 93 37 2 1 88 1 89 4.62e-23 96.3
MsaG044037 AT3G01530.1 52.941 85 40 0 12 96 25 109 5.18e-23 94.4
MsaG044037 AT1G18570.1 53.933 89 40 1 1 88 1 89 5.26e-23 97.1
MsaG044037 AT2G36890.2 50.538 93 37 2 1 88 42 130 5.46e-23 97.1
MsaG044037 AT5G07700.1 51.136 88 43 0 1 88 1 88 7.36e-23 96.7
MsaG044037 AT5G07700.2 51.136 88 43 0 1 88 1 88 7.36e-23 96.7
MsaG044037 AT1G74430.1 55.435 92 33 2 1 88 1 88 7.42e-23 95.1
MsaG044037 AT5G54230.1 42.657 143 76 3 1 141 1 139 7.61e-23 96.3
MsaG044037 AT3G28470.1 51.087 92 37 2 1 88 1 88 8.97e-23 95.9
MsaG044037 AT1G18710.1 49.485 97 49 0 1 97 1 97 1.02e-22 94.7
MsaG044037 AT1G63910.1 52.273 88 42 0 1 88 1 88 1.26e-22 96.3
MsaG044037 AT3G61160.3 77.358 53 12 0 220 272 267 319 1.28e-22 95.9
MsaG044037 AT5G23000.1 52.688 93 35 2 1 88 1 89 1.42e-22 95.5
MsaG044037 AT3G61160.5 77.358 53 12 0 220 272 267 319 1.51e-22 96.3
MsaG044037 AT3G61160.6 77.358 53 12 0 220 272 274 326 1.57e-22 95.9
MsaG044037 AT3G61160.1 77.358 53 12 0 220 272 267 319 3.05e-22 95.9
MsaG044037 AT4G37780.1 49.462 93 38 2 1 88 1 89 3.11e-22 94.4
MsaG044037 AT3G61160.2 77.358 53 12 0 220 272 274 326 3.42e-22 95.9
MsaG044037 AT3G61160.4 77.358 53 12 0 220 272 267 319 3.46e-22 95.5
MsaG044037 AT5G12870.1 58.442 77 32 0 12 88 18 94 3.85e-22 93.6
MsaG044037 AT5G57620.1 49.462 93 38 2 1 88 1 89 6.18e-22 94.0
MsaG044037 AT3G08500.1 54.321 81 37 0 8 88 26 106 1.96e-21 92.8
MsaG044037 AT3G27810.1 49.412 85 43 0 12 96 20 104 1.30e-20 88.2
MsaG044037 AT5G40350.1 48.235 85 44 0 12 96 17 101 3.89e-20 86.7
MsaG044037 AT1G68320.1 51.250 80 39 0 12 91 19 98 5.66e-20 87.8
MsaG044037 AT3G27920.1 50.000 76 38 0 13 88 15 90 6.72e-19 83.6
MsaG044037 AT2G26960.1 47.126 87 38 2 9 91 17 99 8.58e-19 85.9
MsaG044037 AT3G24310.1 51.282 78 38 0 11 88 17 94 9.67e-19 84.0
MsaG044037 AT5G55020.1 51.765 85 38 1 10 94 24 105 1.74e-18 85.5
MsaG044037 AT5G14750.1 51.316 76 37 0 13 88 17 92 2.14e-18 81.6
MsaG044037 AT3G06490.1 50.000 84 42 0 8 91 15 98 2.20e-18 84.0
MsaG044037 AT2G32460.2 51.136 88 32 3 11 94 5 85 2.48e-18 84.7
MsaG044037 AT2G32460.1 51.136 88 32 3 11 94 17 97 2.50e-18 84.7
MsaG044037 AT4G13480.1 52.632 76 36 0 13 88 7 82 3.23e-18 82.4
MsaG044037 AT5G40330.1 48.684 76 39 0 13 88 13 88 6.46e-18 80.9
MsaG044037 AT5G06100.1 44.048 84 47 0 8 91 28 111 8.88e-18 83.2
MsaG044037 AT5G06100.5 44.048 84 47 0 8 91 28 111 9.63e-18 83.2
MsaG044037 AT5G06100.2 44.048 84 47 0 8 91 28 111 9.63e-18 83.2
MsaG044037 AT5G06100.3 44.048 84 47 0 8 91 28 111 9.63e-18 83.2
MsaG044037 AT5G06100.4 44.048 84 47 0 8 91 28 111 9.63e-18 83.2
MsaG044037 AT1G48000.1 46.341 82 44 0 10 91 30 111 1.47e-17 80.1
MsaG044037 AT4G26930.1 47.674 86 37 2 10 91 17 98 1.48e-17 82.0
MsaG044037 AT5G52260.1 54.430 79 36 0 13 91 13 91 5.02e-17 79.3
MsaG044037 AT3G11440.2 41.176 85 50 0 12 96 41 125 6.48e-17 80.9
MsaG044037 AT3G11440.3 41.176 85 50 0 12 96 41 125 8.38e-17 80.5
MsaG044037 AT3G11440.4 41.176 85 50 0 12 96 41 125 8.38e-17 80.5
MsaG044037 AT3G11440.1 41.176 85 50 0 12 96 41 125 8.38e-17 80.5
MsaG044037 AT2G47190.1 46.250 80 43 0 12 91 20 99 9.39e-17 78.6
MsaG044037 AT1G25340.1 46.835 79 42 0 13 91 19 97 1.03e-16 78.6
MsaG044037 AT3G30210.1 47.436 78 41 0 11 88 26 103 1.28e-16 78.2
MsaG044037 AT5G59780.3 49.367 79 40 0 13 91 9 87 2.88e-16 76.6
MsaG044037 AT3G46130.1 48.148 81 42 0 11 91 8 88 2.99e-16 77.0
MsaG044037 AT5G35550.1 50.649 77 38 0 12 88 14 90 6.35e-16 75.9
MsaG044037 AT4G25560.1 51.316 76 37 0 13 88 11 86 3.07e-15 74.3
MsaG044037 AT5G49620.1 42.857 84 48 0 8 91 22 105 6.48e-15 73.9
MsaG044037 AT1G54610.1 47.368 76 28 1 208 271 259 334 8.66e-15 74.7
MsaG044037 AT1G54610.3 47.368 76 28 1 208 271 259 334 8.66e-15 74.7
MsaG044037 AT1G54610.2 47.368 76 28 1 208 271 259 334 8.66e-15 74.7
MsaG044037 AT5G26660.2 75.000 44 11 0 45 88 14 57 2.39e-14 72.4
MsaG044037 AT3G53200.1 48.810 84 35 2 12 91 9 88 2.63e-14 71.2
MsaG044037 AT4G10010.1 50.000 62 31 0 209 270 130 191 5.02e-14 72.0
MsaG044037 AT5G50860.1 40.698 86 39 1 198 271 245 330 8.57e-14 71.6
MsaG044037 AT5G49620.2 42.500 80 46 0 8 87 22 101 8.71e-14 70.9
MsaG044037 AT4G10010.2 50.000 62 31 0 209 270 310 371 9.17e-14 71.6
MsaG044037 AT5G50860.2 40.698 86 39 1 198 271 245 330 9.27e-14 71.2
MsaG044037 AT2G46070.2 51.667 60 29 0 220 279 206 265 9.98e-14 70.5
MsaG044037 AT3G48750.1 46.296 54 29 0 219 272 167 220 1.30e-13 70.1
MsaG044037 AT5G63370.5 54.717 53 24 0 220 272 466 518 1.44e-13 70.9
MsaG044037 AT5G63370.10 54.717 53 24 0 220 272 466 518 1.44e-13 70.9
MsaG044037 AT2G46070.1 51.667 60 29 0 220 279 206 265 1.51e-13 70.5
MsaG044037 AT5G52600.1 43.750 80 45 0 9 88 9 88 1.51e-13 68.2
MsaG044037 AT3G48920.1 44.737 76 42 0 13 88 19 94 1.52e-13 69.3
MsaG044037 AT2G46070.3 51.667 60 29 0 220 279 240 299 1.53e-13 70.5
MsaG044037 AT5G63370.7 54.717 53 24 0 220 272 466 518 1.66e-13 70.9
MsaG044037 AT5G63370.8 54.717 53 24 0 220 272 466 518 1.66e-13 70.9
MsaG044037 AT5G63370.4 54.717 53 24 0 220 272 466 518 1.66e-13 70.9
MsaG044037 AT5G63370.6 54.717 53 24 0 220 272 466 518 1.66e-13 70.9
MsaG044037 AT5G63370.1 54.717 53 24 0 220 272 466 518 1.66e-13 70.9
MsaG044037 AT5G63370.9 54.717 53 24 0 220 272 332 384 1.72e-13 70.5
MsaG044037 AT1G53050.2 42.105 76 32 1 208 271 275 350 2.13e-13 70.5
MsaG044037 AT1G53050.1 42.105 76 32 1 208 271 275 350 2.13e-13 70.5
MsaG044037 AT2G38620.3 41.333 75 33 1 209 272 163 237 2.13e-13 68.9
MsaG044037 AT2G38620.1 41.333 75 33 1 209 272 163 237 2.13e-13 68.9
MsaG044037 AT5G63370.2 54.717 53 24 0 220 272 332 384 2.15e-13 70.5
MsaG044037 AT5G63370.3 54.717 53 24 0 220 272 332 384 2.15e-13 70.5
MsaG044037 AT2G38620.4 40.789 76 34 1 208 272 100 175 2.49e-13 68.6
MsaG044037 AT1G03740.2 42.105 76 32 1 208 271 354 429 3.05e-13 70.1
MsaG044037 AT1G71530.1 47.619 63 33 0 209 271 301 363 3.13e-13 70.1
MsaG044037 AT1G66370.1 44.318 88 45 1 1 88 1 84 3.13e-13 68.2
MsaG044037 AT1G03740.1 42.105 76 32 1 208 271 354 429 3.21e-13 70.1
MsaG044037 AT1G71530.3 47.619 63 33 0 209 271 301 363 3.32e-13 69.7
MsaG044037 AT1G71530.2 47.619 63 33 0 209 271 301 363 3.88e-13 69.3
MsaG044037 AT1G66380.2 48.718 78 40 0 11 88 7 84 4.27e-13 64.7
MsaG044037 AT2G38620.2 40.789 76 34 1 208 272 162 237 4.36e-13 68.6
MsaG044037 AT1G76540.1 43.421 76 32 2 208 272 163 238 6.06e-13 68.2
MsaG044037 AT1G67580.1 48.276 58 30 0 215 272 565 622 6.10e-13 69.3
MsaG044037 AT1G67580.2 48.276 58 30 0 215 272 565 622 6.10e-13 69.3
MsaG044037 AT1G33770.1 44.444 63 35 0 209 271 295 357 6.50e-13 68.9
MsaG044037 AT4G22940.1 42.105 76 32 1 208 271 245 320 1.11e-12 68.2
MsaG044037 AT1G25340.2 43.038 79 40 1 13 91 19 92 1.11e-12 67.0
MsaG044037 AT5G14750.3 69.048 42 13 0 47 88 17 58 1.18e-12 65.1
MsaG044037 AT4G22940.2 42.105 76 32 1 208 271 245 320 1.28e-12 68.2
MsaG044037 AT1G25340.3 43.038 79 40 1 13 91 19 92 1.37e-12 67.0
MsaG044037 AT1G66380.1 48.718 78 40 0 11 88 7 84 1.43e-12 64.3
MsaG044037 AT3G12820.2 60.000 50 20 0 47 96 1 50 2.51e-12 64.7
MsaG044037 AT1G20930.1 43.421 76 32 2 208 272 165 240 2.71e-12 66.2
MsaG044037 AT2G26950.1 38.750 80 49 0 9 88 13 92 3.22e-12 66.6
MsaG044037 AT1G09600.1 41.935 62 36 0 210 271 318 379 3.73e-12 67.0
MsaG044037 AT1G01560.3 48.333 60 31 0 220 279 205 264 4.05e-12 66.2
MsaG044037 AT1G01560.4 53.846 52 24 0 220 271 205 256 4.58e-12 65.5
MsaG044037 AT1G01560.1 53.846 52 24 0 220 271 205 256 4.58e-12 65.5
MsaG044037 AT1G57700.1 41.935 62 36 0 210 271 301 362 4.86e-12 66.6
MsaG044037 AT3G54180.1 38.889 90 43 2 195 272 146 235 5.11e-12 65.5
MsaG044037 AT1G01560.2 48.333 60 31 0 220 279 205 264 5.44e-12 65.9
MsaG044037 AT1G18670.1 45.161 62 34 0 210 271 287 348 5.58e-12 66.2
MsaG044037 AT1G18670.3 45.161 62 34 0 210 271 287 348 5.71e-12 66.2
MsaG044037 AT1G18670.2 45.161 62 34 0 210 271 287 348 6.25e-12 66.2
MsaG044037 AT3G01085.1 39.474 76 34 1 208 271 256 331 7.23e-12 65.9
MsaG044037 AT3G01085.2 39.474 76 34 1 208 271 256 331 7.23e-12 65.9
MsaG044037 AT3G01085.3 39.474 76 34 1 208 271 256 331 7.24e-12 65.9
MsaG044037 AT1G74330.1 27.273 154 107 2 123 271 186 339 1.13e-11 65.5
MsaG044037 AT4G01370.1 48.333 60 31 0 220 279 208 267 1.14e-11 64.7
MsaG044037 AT1G74330.2 27.273 154 107 2 123 271 186 339 1.23e-11 65.1
MsaG044037 AT1G74330.3 27.273 154 107 2 123 271 186 339 1.25e-11 65.1
MsaG044037 AT1G66750.1 40.789 76 34 2 208 272 152 227 1.83e-11 64.3
MsaG044037 AT1G73690.1 47.170 53 28 0 220 272 173 225 1.84e-11 64.3
MsaG044037 AT5G44290.2 40.789 76 33 1 208 271 278 353 1.87e-11 64.7
MsaG044037 AT5G44290.5 40.789 76 33 1 208 271 278 353 1.87e-11 64.7
MsaG044037 AT5G44290.4 40.789 76 33 1 208 271 278 353 1.87e-11 64.7
MsaG044037 AT5G44290.1 40.789 76 33 1 208 271 278 353 1.87e-11 64.7
MsaG044037 AT5G44290.3 40.789 76 33 1 208 271 278 353 1.87e-11 64.7
MsaG044037 AT5G39420.1 38.667 75 34 1 209 271 247 321 2.01e-11 64.7
MsaG044037 AT5G44290.6 40.789 76 33 1 208 271 278 353 2.10e-11 64.3
MsaG044037 AT3G05050.3 41.333 75 32 1 209 271 280 354 2.25e-11 64.3
MsaG044037 AT3G05050.2 41.333 75 32 1 209 271 280 354 2.25e-11 64.3
MsaG044037 AT3G05050.1 41.333 75 32 1 209 271 280 354 2.25e-11 64.3
MsaG044037 AT5G44290.7 40.789 76 33 1 208 271 278 353 2.49e-11 64.3
MsaG044037 AT5G35980.2 46.875 64 33 1 209 272 278 340 3.50e-11 63.9
MsaG044037 AT5G35980.3 46.875 64 33 1 209 272 243 305 3.82e-11 63.9
MsaG044037 AT5G35980.1 46.875 64 33 1 209 272 278 340 4.00e-11 63.9
MsaG044037 AT1G71530.4 50.000 54 27 0 209 262 301 354 4.86e-11 62.8
MsaG044037 AT4G11330.1 45.283 53 29 0 220 272 208 260 6.06e-11 62.8
MsaG044037 AT1G56650.1 47.436 78 41 0 11 88 7 84 7.54e-11 61.6

Find 72 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACTTTATCCTTAATAAT+TGG 0.145066 8:-54915068 MsaT044037.1:CDS
CACTTGATTTCTTCCCTTGT+TGG 0.201375 8:+54911999 None:intergenic
AGGCTAGGACCTGTTGTTAA+TGG 0.307944 8:-54914414 MsaT044037.1:CDS
TCTTATCAGCCACTGTTTCC+TGG 0.308862 8:-54912225 MsaT044037.1:intron
ACACTGAATCCCAATTATTA+AGG 0.311416 8:+54915058 None:intergenic
GCAGTTCTCCGATGGTTATC+TGG 0.324091 8:-54913746 MsaT044037.1:intron
AATGATGTCAGAGCTGAATA+AGG 0.325937 8:-54913680 MsaT044037.1:CDS
AAATATTTACCTGCAAGTTT+AGG 0.328128 8:+54915024 None:intergenic
GAGAATGTTCCTAAACTTGC+AGG 0.336754 8:-54915033 MsaT044037.1:intron
CAATAAAGCCACCTCTCTTA+AGG 0.350479 8:+54914851 None:intergenic
GAGAGGTGGCTTTATTGAAA+TGG 0.356209 8:-54914845 MsaT044037.1:CDS
ATCCCTTGAAAGAAGGTTGC+AGG 0.365664 8:-54914434 MsaT044037.1:CDS
GAACTTTATCCTTAATAATT+GGG 0.368286 8:-54915067 MsaT044037.1:CDS
TGTTATCTGCAATTTATCAT+AGG 0.373214 8:+54913364 None:intergenic
TGGTCAGCTGGTTGCGTACT+TGG 0.374738 8:-54912345 MsaT044037.1:CDS
GTGTGAGCAGAAGGCTTTGA+TGG 0.409544 8:-54913387 MsaT044037.1:CDS
AGCCTTCTGCTCACACTTGT+AGG 0.411998 8:+54913394 None:intergenic
TACATGCCCATCTTGGTAAC+AGG 0.413348 8:-54914801 MsaT044037.1:intron
TAGCCTGCAACCTTCTTTCA+AGG 0.418414 8:+54914431 None:intergenic
TGAGATGGATTAATTATTTG+AGG 0.432748 8:-54914879 MsaT044037.1:CDS
TCAATACCTGTTACCAAGAT+GGG 0.444788 8:+54914795 None:intergenic
TACTCAGTTGCACCGAATAT+AGG 0.447929 8:+54912387 None:intergenic
AAAACAGTTCCATTAACAAC+AGG 0.450758 8:+54914405 None:intergenic
CCTTGATAATTTCCACAAGT+TGG 0.452229 8:+54912187 None:intergenic
ATTTCAGATCCCTTGAAAGA+AGG 0.454366 8:-54914441 MsaT044037.1:CDS
TTCAATACCTGTTACCAAGA+TGG 0.459742 8:+54914794 None:intergenic
TTGAAAGAAGGTTGCAGGCT+AGG 0.466614 8:-54914429 MsaT044037.1:CDS
AAAGGTGAAAGCTTTCAGAT+TGG 0.471295 8:-54913498 MsaT044037.1:intron
AGAGCTCCTGAGCCTATATT+CGG 0.474591 8:-54912399 MsaT044037.1:CDS
GTCATTGACATCTGGTCAGC+TGG 0.482850 8:-54912357 MsaT044037.1:CDS
TGATCTTCTTCAATAGTCCA+TGG 0.502122 8:+54915099 None:intergenic
TTGCAGATAACAGTGGATCA+AGG 0.505297 8:-54913353 MsaT044037.1:CDS
CCACTGTTTCCTGGTGAGAG+TGG 0.506242 8:-54912216 MsaT044037.1:CDS
CCAACTTGTGGAAATTATCA+AGG 0.511188 8:-54912187 MsaT044037.1:intron
AAGCCACCTCTCTTAAGGTC+TGG 0.512429 8:+54914856 None:intergenic
TCCGTATGTCACGTACCTAA+AGG 0.512712 8:-54913641 MsaT044037.1:intron
TAATAATTGGGATTCAGTGT+TGG 0.522517 8:-54915055 MsaT044037.1:CDS
TTGACAACAAACGTAACTTC+GGG 0.523157 8:+54913701 None:intergenic
ATACAACTACATGCCCATCT+TGG 0.523762 8:-54914808 MsaT044037.1:CDS
ACACCACAGTCATTGACATC+TGG 0.524089 8:-54912365 MsaT044037.1:CDS
AAAGCTTTCAGATTGGAACT+TGG 0.531075 8:-54913491 MsaT044037.1:CDS
TTTGAAGGTCTTCTAAGATG+TGG 0.533534 8:-54914916 MsaT044037.1:intron
ATTGACAACAAACGTAACTT+CGG 0.535428 8:+54913700 None:intergenic
TGGCTTTATTGAAATGGAAG+AGG 0.537114 8:-54914839 MsaT044037.1:CDS
ACGCACCAAGGACCTAGAAA+AGG 0.542258 8:-54913465 MsaT044037.1:CDS
ATGATGTCAGAGCTGAATAA+GGG 0.543037 8:-54913679 MsaT044037.1:CDS
ACCTTTAGGTACGTGACATA+CGG 0.546444 8:+54913640 None:intergenic
AACCTACAAGTGTGAGCAGA+AGG 0.550765 8:-54913396 MsaT044037.1:CDS
TGGTAAATGCAGTTCTCCGA+TGG 0.552479 8:-54913754 MsaT044037.1:intron
CAACCATGTTGTGATAAGGT+TGG 0.554200 8:-54915135 MsaT044037.1:CDS
AGCCTGCAACCTTCTTTCAA+GGG 0.559136 8:+54914432 None:intergenic
GATAAGGTTGGTTTGAAGAG+AGG 0.562058 8:-54915123 MsaT044037.1:CDS
GTTGCACCGAATATAGGCTC+AGG 0.565527 8:+54912393 None:intergenic
AGGCCAGACCTTAAGAGAGG+TGG 0.572119 8:-54914859 MsaT044037.1:CDS
GAAAGAGTAGTACATTGAGA+TGG 0.573271 8:-54914894 MsaT044037.1:CDS
TGGTCTACTCCACTCTCACC+AGG 0.583110 8:+54912207 None:intergenic
CCAAGGACCTAGAAAAGGAA+GGG 0.587821 8:-54913460 MsaT044037.1:CDS
AAGACAACCATGTTGTGATA+AGG 0.590627 8:-54915139 MsaT044037.1:CDS
ACCAAGGACCTAGAAAAGGA+AGG 0.599301 8:-54913461 MsaT044037.1:CDS
GATCATAGATTCAGATGGTG+AGG 0.602096 8:-54913438 MsaT044037.1:CDS
TTGAGGCCAGACCTTAAGAG+AGG 0.617024 8:-54914862 MsaT044037.1:CDS
GATCAAGTCCAGATAACCAT+CGG 0.618277 8:+54913738 None:intergenic
GAAGGGATCATAGATTCAGA+TGG 0.634115 8:-54913443 MsaT044037.1:CDS
TGTCAGAGCTGAATAAGGGA+GGG 0.635123 8:-54913675 MsaT044037.1:CDS
ATGTCAGAGCTGAATAAGGG+AGG 0.639595 8:-54913676 MsaT044037.1:CDS
AAACCAACCTTATCACAACA+TGG 0.641918 8:+54915132 None:intergenic
CCACTCTCACCAGGAAACAG+TGG 0.653830 8:+54912216 None:intergenic
TTGGTTTGAAGAGAGGACCA+TGG 0.663165 8:-54915116 MsaT044037.1:CDS
GGAACTTGGTACACGCACCA+AGG 0.664119 8:-54913477 MsaT044037.1:CDS
TGATAAATTGCAGATAACAG+TGG 0.665901 8:-54913360 MsaT044037.1:CDS
GAGTGGAGTAGACCAACTTG+TGG 0.666033 8:-54912199 MsaT044037.1:CDS
TGACCAGATGTCAATGACTG+TGG 0.757242 8:+54912362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 54911994 54915166 54911994 ID=MsaG044037
Chr8 mRNA 54911994 54915166 54911994 ID=MsaT044037.1;Parent=MsaG044037
Chr8 exon 54911994 54912026 54911994 ID=MsaT044037.1.exon8;Parent=MsaT044037.1
Chr8 CDS 54911994 54912026 54911994 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54912188 54912238 54912188 ID=MsaT044037.1.exon7;Parent=MsaT044037.1
Chr8 CDS 54912188 54912238 54912188 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54912326 54912428 54912326 ID=MsaT044037.1.exon6;Parent=MsaT044037.1
Chr8 CDS 54912326 54912428 54912326 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54913329 54913516 54913329 ID=MsaT044037.1.exon5;Parent=MsaT044037.1
Chr8 CDS 54913329 54913516 54913329 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54913642 54913764 54913642 ID=MsaT044037.1.exon4;Parent=MsaT044037.1
Chr8 CDS 54913642 54913764 54913642 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54914410 54914491 54914410 ID=MsaT044037.1.exon3;Parent=MsaT044037.1
Chr8 CDS 54914410 54914491 54914410 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54914802 54914931 54914802 ID=MsaT044037.1.exon2;Parent=MsaT044037.1
Chr8 CDS 54914802 54914931 54914802 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Chr8 exon 54915034 54915166 54915034 ID=MsaT044037.1.exon1;Parent=MsaT044037.1
Chr8 CDS 54915034 54915166 54915034 ID=cds.MsaT044037.1;Parent=MsaT044037.1
Gene Sequence

>MsaT044037.1

ATGGGAAGACAACCATGTTGTGATAAGGTTGGTTTGAAGAGAGGACCATGGACTATTGAAGAAGATCACAAGCTTGTGAACTTTATCCTTAATAATTGGGATTCAGTGTTGGAGAATGTTCCTAAACTTGCAGGTCTTCTAAGATGTGGAAAGAGTAGTACATTGAGATGGATTAATTATTTGAGGCCAGACCTTAAGAGAGGTGGCTTTATTGAAATGGAAGAGGATCAAATTATACAACTACATGCCCATCTTGGTAACAGGATGGTGAAATGGATCAAAAACATCAAAATTTCAGATCCCTTGAAAGAAGGTTGCAGGCTAGGACCTGTTGTTAATGGAACTTTCTCCGATGGTTATCTGGACTTGATCATTACGAAGAATTGCCCGAAGTTACGTTTGTTGTCAATGATGTCAGAGCTGAATAAGGGAGGGCACGTGAAATCTCCGTATGTCACGTACCTAAAGGTGAAAGCTTTCAGATTGGAACTTGGTACACGCACCAAGGACCTAGAAAAGGAAGGGATCATAGATTCAGATGGTGAGGTTTTGACAAGAGGGAGAAGAACCTACAAGTGTGAGCAGAAGGCTTTGATGGCCTATGATAAATTGCAGATAACAGTGGATCAAGGTTTAGCTACACTTTTTACCCCTATGTACTATAGAGCTCCTGAGCCTATATTCGGTGCAACTGAGTACACCACAGTCATTGACATCTGGTCAGCTGGTTGCGTACTTGGTGAACTTTTGCTTGGCCAACCACTGTTTCCTGGTGAGAGTGGAGTAGACCAACTTGTGGAAATTATCAAGGTACTCCAACAAGGGAAGAAATCAAGTGCATGA
Protein sequence

>MsaT044037.1

MGRQPCCDKVGLKRGPWTIEEDHKLVNFILNNWDSVLENVPKLAGLLRCGKSSTLRWINYLRPDLKRGGFIEMEEDQIIQLHAHLGNRMVKWIKNIKISDPLKEGCRLGPVVNGTFSDGYLDLIITKNCPKLRLLSMMSELNKGGHVKSPYVTYLKVKAFRLELGTRTKDLEKEGIIDSDGEVLTRGRRTYKCEQKALMAYDKLQITVDQGLATLFTPMYYRAPEPIFGATEYTTVIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLQQGKKSSA*