AlfalfaGEDB | MsaG044514

M. sativa ssp. caerulea / MsaG044514

KEGG: -
GO: GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF10533.12

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044514	XP_013457446.1	97.929	338	6	1	1	337	1	338	0.0	676

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044514	sp\|O22176\|WRK15_ARATH	51.124	356	116	15	1	337	1	317	3.54e-91	278

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044514	tr\|A0A072UP79\|A0A072UP79_MEDTR	97.929	338	6	1	1	337	1	338	0.0	676

TFs/TRs:

Gene ID	Type	Classification
MsaG044514	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG001291	MsaG044514	0.816118	1.130891e-51	2.248954e-49
MsaG005814	MsaG044514	0.805905	1.802942e-49	2.791693e-47
MsaG008330	MsaG044514	0.804324	3.849278e-49	5.745057e-47
MsaG008939	MsaG044514	0.814051	3.236803e-51	6.109428e-49
MsaG008941	MsaG044514	0.810385	2.024176e-50	3.489432e-48
MsaG008959	MsaG044514	0.840381	1.663858e-57	6.573814e-55
MsaG010431	MsaG044514	0.802037	1.138648e-48	1.612126e-46
MsaG010471	MsaG044514	0.811233	1.329643e-50	2.340046e-48
MsaG010757	MsaG044514	0.808100	6.220211e-50	1.014701e-47
MsaG041840	MsaG044514	0.811584	1.116800e-50	1.982442e-48
MsaG044530	MsaG044514	0.874713	1.126087e-67	1.599112e-64
MsaG044514	MsaG002461	0.824445	1.424172e-53	3.528654e-51
MsaG044514	MsaG030964	0.812275	7.906523e-51	1.427557e-48
MsaG017395	MsaG044514	0.854561	2.188483e-61	1.391894e-58
MsaG021140	MsaG044514	0.803066	7.002929e-49	1.015160e-46
MsaG021164	MsaG044514	0.802683	8.394133e-49	1.206179e-46
MsaG021165	MsaG044514	0.832418	1.729811e-55	5.368439e-53
MsaG021264	MsaG044514	0.808452	5.237583e-50	8.616624e-48
MsaG021270	MsaG044514	0.803830	4.870424e-49	7.186191e-47
MsaG029384	MsaG044514	0.844401	1.447692e-58	6.503905e-56
MsaG031647	MsaG044514	0.823938	1.871145e-53	4.572490e-51
MsaG033897	MsaG044514	0.808984	4.037699e-50	6.728314e-48
MsaG038555	MsaG044514	0.819447	2.021368e-52	4.381341e-50
MsaG039393	MsaG044514	0.802046	1.133906e-48	1.605739e-46
MsaG041735	MsaG044514	0.815477	1.569412e-51	3.070584e-49
MsaG041809	MsaG044514	0.811942	9.338586e-51	1.672425e-48
MsaG041854	MsaG044514	0.802193	1.057973e-48	1.503246e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044514	MtrunA17_Chr4g0053281	97.929	338	6	1	1	337	1	338	0.0	676
MsaG044514	MtrunA17_Chr5g0401821	57.817	339	73	9	1	337	1	271	1.17e-113	330
MsaG044514	MtrunA17_Chr1g0147881	40.103	389	132	13	1	337	1	340	4.00e-69	219
MsaG044514	MtrunA17_Chr4g0071521	44.582	323	146	11	20	333	15	313	2.40e-67	214
MsaG044514	MtrunA17_Chr1g0184691	53.297	182	63	5	151	323	183	351	2.42e-48	166
MsaG044514	MtrunA17_Chr3g0139021	51.852	162	69	4	171	331	227	380	3.73e-43	153
MsaG044514	MtrunA17_Chr7g0228941	62.921	89	32	1	246	334	33	120	4.32e-34	121
MsaG044514	MtrunA17_Chr2g0284321	55.172	87	37	2	239	324	9	94	3.47e-27	106
MsaG044514	MtrunA17_Chr7g0270051	55.814	86	34	1	241	322	25	110	8.51e-27	106
MsaG044514	MtrunA17_Chr2g0319961	58.242	91	31	3	240	324	50	139	1.04e-26	106
MsaG044514	MtrunA17_Chr7g0248691	60.976	82	27	2	241	322	135	211	4.41e-26	106
MsaG044514	MtrunA17_Chr2g0293481	56.250	96	36	3	232	322	230	324	1.01e-25	107
MsaG044514	MtrunA17_Chr8g0379461	53.846	91	35	3	241	324	45	135	1.13e-25	103
MsaG044514	MtrunA17_Chr8g0348311	58.537	82	29	1	241	322	136	212	1.17e-24	102
MsaG044514	MtrunA17_Chr1g0202461	52.941	85	35	1	239	323	240	319	3.14e-23	99.0
MsaG044514	MtrunA17_Chr2g0289181	57.576	66	28	0	258	323	7	72	3.16e-23	96.3
MsaG044514	MtrunA17_Chr5g0445311	45.545	101	43	2	241	330	329	428	1.24e-22	98.6
MsaG044514	MtrunA17_Chr3g0101131	49.474	95	39	2	241	327	383	476	8.89e-22	96.3
MsaG044514	MtrunA17_Chr7g0218081	35.227	176	91	5	174	327	297	471	1.51e-21	95.5
MsaG044514	MtrunA17_Chr7g0218081	54.839	62	25	3	262	322	224	283	1.55e-14	74.3
MsaG044514	MtrunA17_Chr5g0432161	51.765	85	37	2	249	330	402	485	2.17e-21	95.1
MsaG044514	MtrunA17_Chr5g0432161	50.877	57	26	2	266	322	245	299	7.86e-13	69.3
MsaG044514	MtrunA17_Chr3g0079691	41.322	121	60	3	223	333	443	562	2.58e-21	95.1
MsaG044514	MtrunA17_Chr3g0079691	50.877	57	26	2	266	322	281	335	2.47e-12	67.8
MsaG044514	MtrunA17_Chr7g0249311	51.136	88	39	2	249	333	373	459	2.76e-21	94.7
MsaG044514	MtrunA17_Chr7g0249311	50.000	58	27	2	266	323	180	235	6.97e-12	66.6
MsaG044514	MtrunA17_Chr4g0004911	50.633	79	35	2	249	324	317	394	2.95e-21	94.4
MsaG044514	MtrunA17_Chr4g0004911	52.632	57	26	1	266	322	185	240	2.24e-14	73.9
MsaG044514	MtrunA17_Chr7g0243891	44.554	101	52	2	230	330	342	438	3.02e-21	94.4
MsaG044514	MtrunA17_Chr7g0243891	52.632	57	25	2	266	322	217	271	1.10e-12	68.9
MsaG044514	MtrunA17_Chr3g0106491	40.517	116	53	3	230	330	315	429	3.26e-21	94.4
MsaG044514	MtrunA17_Chr3g0106491	50.000	66	31	2	266	331	199	262	3.76e-14	73.2
MsaG044514	MtrunA17_Chr7g0249301	47.423	97	43	3	238	327	258	353	5.53e-21	92.8
MsaG044514	MtrunA17_Chr7g0249301	51.724	58	26	2	266	323	63	118	2.28e-12	67.4
MsaG044514	MtrunA17_Chr7g0263531	48.000	75	38	1	261	335	357	430	1.62e-20	92.0
MsaG044514	MtrunA17_Chr7g0263531	55.556	63	25	3	261	322	184	244	3.57e-15	76.3
MsaG044514	MtrunA17_Chr5g0418191	51.220	82	36	2	249	327	301	381	2.81e-20	91.3
MsaG044514	MtrunA17_Chr5g0418191	53.846	65	27	3	261	324	146	208	2.62e-14	73.6
MsaG044514	MtrunA17_Chr4g0001361	45.455	88	45	1	238	322	132	219	7.74e-20	88.6
MsaG044514	MtrunA17_Chr3g0136961	56.897	58	25	0	266	323	139	196	8.08e-20	88.2
MsaG044514	MtrunA17_Chr4g0051181	40.952	105	43	1	239	324	198	302	9.13e-20	90.1
MsaG044514	MtrunA17_Chr4g0074001	59.649	57	22	1	266	322	360	415	1.83e-19	89.4
MsaG044514	MtrunA17_Chr4g0042831	50.000	82	37	2	249	327	259	339	2.06e-19	88.2
MsaG044514	MtrunA17_Chr1g0150801	50.704	71	34	1	252	322	89	158	3.08e-19	83.6
MsaG044514	MtrunA17_Chr3g0099641	50.685	73	36	0	252	324	238	310	3.59e-19	88.2
MsaG044514	MtrunA17_Chr8g0387501	61.404	57	22	0	266	322	130	186	3.75e-19	85.9
MsaG044514	MtrunA17_Chr7g0270191	50.000	74	36	1	249	322	129	201	4.51e-19	85.9
MsaG044514	MtrunA17_Chr2g0288871	50.000	76	38	0	249	324	289	364	4.62e-19	88.2
MsaG044514	MtrunA17_Chr8g0335811	44.578	83	42	2	244	323	130	211	5.03e-19	84.7
MsaG044514	MtrunA17_Chr4g0060271	57.627	59	25	0	266	324	256	314	1.88e-18	86.3
MsaG044514	MtrunA17_Chr7g0270831	54.839	62	28	0	266	327	217	278	2.03e-18	85.9
MsaG044514	MtrunA17_Chr2g0322391	47.368	76	40	0	249	324	333	408	2.84e-18	85.9
MsaG044514	MtrunA17_Chr1g0150281	49.231	65	33	0	266	330	141	205	2.88e-18	83.6
MsaG044514	MtrunA17_Chr8g0383251	55.556	63	27	1	262	324	105	166	2.98e-18	81.3
MsaG044514	MtrunA17_Chr7g0216891	54.839	62	28	0	266	327	220	281	3.25e-18	85.5
MsaG044514	MtrunA17_Chr4g0075201	48.684	76	39	0	249	324	251	326	3.73e-18	85.1
MsaG044514	MtrunA17_Chr2g0333851	55.000	60	27	0	263	322	167	226	6.16e-18	83.2
MsaG044514	MtrunA17_Chr2g0302391	54.839	62	28	0	266	327	212	273	6.32e-18	84.3
MsaG044514	MtrunA17_Chr4g0025061	54.839	62	28	0	266	327	361	422	9.97e-18	84.3
MsaG044514	MtrunA17_Chr1g0194481	45.238	84	43	2	241	322	132	214	4.54e-17	80.9
MsaG044514	MtrunA17_Chr3g0129321	44.186	86	44	2	240	322	90	174	5.72e-17	78.2
MsaG044514	MtrunA17_Chr8g0383351	45.455	77	37	2	251	323	142	217	8.77e-17	78.6
MsaG044514	MtrunA17_Chr4g0051881	45.070	71	38	1	252	322	165	234	1.06e-16	79.7
MsaG044514	MtrunA17_Chr2g0294231	44.706	85	46	1	248	332	186	269	1.25e-16	80.1
MsaG044514	MtrunA17_Chr1g0150271	50.000	62	31	0	263	324	99	160	1.29e-16	78.6
MsaG044514	MtrunA17_Chr5g0443131	47.887	71	36	1	252	322	144	213	1.42e-16	79.3
MsaG044514	MtrunA17_Chr7g0238921	43.478	92	47	3	232	322	93	180	1.75e-16	79.0
MsaG044514	MtrunA17_Chr5g0447701	53.448	58	26	1	266	323	253	309	1.87e-16	79.7
MsaG044514	MtrunA17_Chr3g0129361	46.053	76	37	2	251	323	127	201	2.18e-16	77.0
MsaG044514	MtrunA17_Chr3g0126391	40.187	107	50	6	234	333	100	199	2.64e-16	78.6
MsaG044514	MtrunA17_Chr7g0248721	38.835	103	50	4	231	322	96	196	8.45e-16	75.5
MsaG044514	MtrunA17_Chr4g0025051	51.613	62	30	0	266	327	336	397	1.29e-15	77.8
MsaG044514	MtrunA17_Chr5g0418781	38.947	95	55	2	241	333	98	191	2.05e-15	75.5
MsaG044514	MtrunA17_Chr7g0224801	46.875	64	33	1	261	324	89	151	3.88e-15	72.4
MsaG044514	MtrunA17_Chr1g0188941	47.619	63	32	1	262	324	48	109	7.18e-15	70.1
MsaG044514	MtrunA17_Chr4g0068541	44.595	74	40	1	249	322	192	264	9.45e-15	74.7
MsaG044514	MtrunA17_Chr6g0485431	36.735	98	49	3	239	324	117	213	5.20e-14	72.0
MsaG044514	MtrunA17_Chr1g0189391	39.623	106	48	5	230	323	54	155	7.84e-14	71.2
MsaG044514	MtrunA17_Chr7g0275531	48.438	64	31	1	266	327	119	182	2.05e-13	70.1
MsaG044514	MtrunA17_Chr5g0402931	53.448	58	24	2	265	322	123	177	2.91e-13	67.4
MsaG044514	MtrunA17_Chr8g0347251	42.529	87	46	3	237	320	108	193	8.36e-13	68.6
MsaG044514	MtrunA17_Chr8g0387981	47.368	57	28	1	266	320	133	189	9.02e-13	68.6
MsaG044514	MtrunA17_Chr8g0386241	39.189	74	43	2	262	334	100	172	2.82e-12	64.7
MsaG044514	MtrunA17_Chr4g0024391	45.161	62	34	0	266	327	230	291	3.46e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044514	AT2G23320.1	51.124	356	116	15	1	337	1	317	3.60e-92	278
MsaG044514	AT4G24240.1	45.503	378	114	14	1	324	1	340	6.01e-85	261
MsaG044514	AT4G31550.1	47.143	350	118	16	1	326	1	307	1.00e-80	249
MsaG044514	AT4G31550.2	46.571	350	119	16	1	326	1	306	2.70e-79	245
MsaG044514	AT2G24570.1	44.144	333	117	13	20	325	13	303	1.35e-70	223
MsaG044514	AT2G23320.2	46.154	299	108	14	1	285	1	260	4.97e-59	191
MsaG044514	AT5G28650.1	42.905	296	98	10	85	323	39	320	3.13e-57	189
MsaG044514	AT3G04670.1	43.000	300	92	13	85	323	39	320	6.70e-57	187
MsaG044514	AT4G24240.2	40.413	339	110	14	1	285	1	301	1.23e-53	178
MsaG044514	AT2G30590.1	60.127	158	50	4	167	322	224	370	3.21e-53	179
MsaG044514	AT4G31550.3	42.071	309	111	16	1	285	1	265	3.94e-50	168
MsaG044514	AT1G29280.1	57.609	92	33	2	237	322	40	131	6.73e-30	115
MsaG044514	AT3G04670.2	36.842	266	89	13	85	289	39	286	2.75e-29	114
MsaG044514	AT2G34830.1	56.322	87	33	1	241	322	186	272	8.13e-26	107
MsaG044514	AT2G34830.2	56.322	87	33	1	241	322	195	281	8.69e-26	107
MsaG044514	AT3G58710.1	53.608	97	39	2	240	330	40	136	9.56e-26	104
MsaG044514	AT4G01250.1	50.000	108	45	2	215	322	87	185	1.15e-25	104
MsaG044514	AT1G30650.1	56.322	87	33	1	241	322	188	274	1.25e-24	103
MsaG044514	AT3G58710.2	52.083	96	40	2	241	330	40	135	1.45e-24	101
MsaG044514	AT2G38470.1	52.941	85	36	2	249	330	343	426	2.80e-23	100
MsaG044514	AT2G38470.1	52.632	57	25	2	266	322	185	239	2.92e-13	70.9
MsaG044514	AT2G04880.2	53.425	73	33	1	252	324	270	341	3.40e-21	94.4
MsaG044514	AT5G26170.1	54.167	72	32	1	252	323	100	170	3.74e-21	89.4
MsaG044514	AT2G04880.1	53.425	73	33	1	252	324	294	365	3.75e-21	94.4
MsaG044514	AT5G52830.1	50.000	82	37	1	241	322	145	222	9.30e-21	92.0
MsaG044514	AT4G23550.1	53.247	77	32	1	248	324	127	199	1.23e-20	91.3
MsaG044514	AT5G56270.1	51.220	82	36	2	249	327	468	548	1.60e-20	93.2
MsaG044514	AT5G56270.1	49.123	57	27	2	266	322	274	328	5.73e-11	63.9
MsaG044514	AT4G26640.5	50.000	82	40	1	249	330	189	269	1.77e-20	91.7
MsaG044514	AT4G26640.6	50.000	82	40	1	249	330	189	269	1.77e-20	91.7
MsaG044514	AT4G26640.4	50.000	82	40	1	249	330	189	269	1.77e-20	91.7
MsaG044514	AT4G26640.3	50.000	82	40	1	249	330	189	269	1.77e-20	91.7
MsaG044514	AT4G26640.7	50.000	82	40	1	249	330	325	405	2.55e-20	92.0
MsaG044514	AT4G26640.1	50.000	82	40	1	249	330	293	373	2.70e-20	92.0
MsaG044514	AT4G26640.2	50.000	82	40	1	249	330	365	445	2.85e-20	92.0
MsaG044514	AT1G13960.2	53.165	79	33	2	249	324	237	314	2.92e-20	90.9
MsaG044514	AT1G13960.2	56.452	62	24	3	262	322	72	131	1.68e-15	77.0
MsaG044514	AT1G13960.1	53.165	79	33	2	249	324	390	467	5.51e-20	91.3
MsaG044514	AT1G13960.1	56.452	62	24	3	262	322	225	284	2.13e-15	77.4
MsaG044514	AT2G03340.1	49.438	89	41	2	249	334	396	483	8.29e-20	90.5
MsaG044514	AT2G03340.1	51.389	72	32	3	261	331	245	314	8.09e-16	78.6
MsaG044514	AT4G30935.1	55.932	59	25	1	266	324	332	389	1.05e-19	90.1
MsaG044514	AT5G07100.2	43.678	87	45	2	241	324	114	199	1.11e-19	86.7
MsaG044514	AT5G07100.2	49.123	57	28	1	266	322	25	80	2.78e-12	65.9
MsaG044514	AT5G07100.4	43.678	87	45	2	241	324	114	199	1.11e-19	86.7
MsaG044514	AT5G07100.4	49.123	57	28	1	266	322	25	80	2.78e-12	65.9
MsaG044514	AT5G07100.5	43.678	87	45	2	241	324	114	199	1.11e-19	86.7
MsaG044514	AT5G07100.5	49.123	57	28	1	266	322	25	80	2.78e-12	65.9
MsaG044514	AT5G07100.3	43.678	87	45	2	241	324	114	199	1.11e-19	86.7
MsaG044514	AT5G07100.3	49.123	57	28	1	266	322	25	80	2.78e-12	65.9
MsaG044514	AT5G07100.1	42.574	101	53	3	225	324	196	292	1.57e-19	87.8
MsaG044514	AT5G07100.1	49.123	57	28	1	266	322	118	173	3.37e-12	66.6
MsaG044514	AT3G01080.2	51.899	79	34	2	249	324	325	402	2.29e-19	89.0
MsaG044514	AT3G01080.2	54.839	62	25	3	262	322	201	260	1.45e-14	74.7
MsaG044514	AT4G04450.2	41.414	99	55	1	229	324	159	257	2.32e-19	89.0
MsaG044514	AT3G01080.1	51.899	79	34	2	249	324	287	364	2.69e-19	88.6
MsaG044514	AT3G01080.1	54.839	62	25	3	262	322	163	222	1.84e-14	74.3
MsaG044514	AT4G04450.1	41.414	99	55	1	229	324	253	351	4.60e-19	88.6
MsaG044514	AT1G68150.1	59.322	59	24	0	266	324	236	294	5.01e-19	87.4
MsaG044514	AT5G64810.1	40.000	125	64	4	219	334	57	179	5.94e-19	84.0
MsaG044514	AT1G62300.1	50.000	76	38	0	249	324	296	371	7.75e-19	87.8
MsaG044514	AT5G15130.2	59.322	59	24	0	266	324	186	244	1.05e-18	87.4
MsaG044514	AT2G44745.1	43.902	82	42	2	244	322	121	201	1.06e-18	84.0
MsaG044514	AT4G39410.1	45.455	88	44	2	239	323	194	280	1.13e-18	85.5
MsaG044514	AT5G15130.1	59.322	59	24	0	266	324	228	286	1.23e-18	87.0
MsaG044514	AT4G22070.4	50.000	76	38	0	249	324	281	356	1.45e-18	87.0
MsaG044514	AT4G22070.3	50.000	76	38	0	249	324	281	356	1.45e-18	87.0
MsaG044514	AT4G22070.2	50.000	76	38	0	249	324	281	356	1.45e-18	87.0
MsaG044514	AT4G22070.1	50.000	76	38	0	249	324	281	356	1.45e-18	87.0
MsaG044514	AT4G26440.1	45.652	92	49	1	236	327	343	433	2.04e-18	86.7
MsaG044514	AT4G26440.1	50.820	61	27	3	264	323	176	234	1.94e-11	65.5
MsaG044514	AT1G29860.1	42.553	94	53	1	229	322	100	192	2.57e-18	84.0
MsaG044514	AT5G45050.2	42.017	119	64	2	205	322	1095	1209	4.73e-18	85.9
MsaG044514	AT5G45050.4	42.017	119	64	2	205	322	984	1098	4.99e-18	85.9
MsaG044514	AT5G45050.1	42.017	119	64	2	205	322	1123	1237	5.07e-18	85.9
MsaG044514	AT4G18170.1	41.667	84	48	1	241	324	148	230	8.78e-18	83.2
MsaG044514	AT5G45260.1	48.235	85	36	2	240	322	1189	1267	8.84e-18	85.1
MsaG044514	AT1G80840.1	48.571	70	35	1	263	331	144	213	9.74e-18	82.8
MsaG044514	AT5G49520.1	48.649	74	37	1	249	322	205	277	1.19e-17	83.6
MsaG044514	AT1G55600.1	48.052	77	36	2	249	322	288	363	1.44e-17	84.0
MsaG044514	AT4G01720.1	46.341	82	38	1	243	324	223	298	2.24e-17	83.2
MsaG044514	AT2G37260.3	54.688	64	28	1	261	324	265	327	3.15e-17	82.0
MsaG044514	AT2G37260.3	53.448	58	25	2	266	323	86	141	1.76e-13	70.9
MsaG044514	AT2G37260.2	57.627	59	24	1	266	324	268	325	3.60e-17	81.6
MsaG044514	AT2G37260.2	53.448	58	25	2	266	323	84	139	1.93e-13	70.9
MsaG044514	AT2G37260.1	57.627	59	24	1	266	324	350	407	3.87e-17	82.4
MsaG044514	AT2G37260.1	53.448	58	25	2	266	323	166	221	1.71e-13	71.2
MsaG044514	AT4G31800.2	45.205	73	40	0	250	322	96	168	5.42e-17	79.7
MsaG044514	AT3G62340.1	46.914	81	42	1	242	322	95	174	6.13e-17	80.1
MsaG044514	AT4G31800.1	45.205	73	40	0	250	322	161	233	8.92e-17	80.1
MsaG044514	AT2G47260.1	45.238	84	44	2	239	322	149	230	8.92e-17	80.5
MsaG044514	AT2G40740.1	39.815	108	59	3	216	320	126	230	9.96e-17	79.7
MsaG044514	AT2G40740.3	39.815	108	59	3	216	320	135	239	1.16e-16	79.7
MsaG044514	AT5G41570.1	41.860	86	46	2	240	322	70	154	1.51e-16	77.0
MsaG044514	AT1G69310.4	43.902	82	42	2	244	322	123	203	2.42e-16	78.6
MsaG044514	AT1G69310.2	43.902	82	42	2	244	322	123	203	2.42e-16	78.6
MsaG044514	AT1G69310.1	43.902	82	42	2	244	322	123	203	2.42e-16	78.6
MsaG044514	AT1G18860.1	55.932	59	26	0	266	324	240	298	2.70e-16	80.1
MsaG044514	AT2G30250.1	44.737	76	41	1	252	327	315	389	3.26e-16	79.3
MsaG044514	AT3G01970.1	47.692	65	33	1	261	325	61	124	5.26e-16	74.7
MsaG044514	AT5G46350.1	43.836	73	40	1	252	324	170	241	9.39e-16	77.4
MsaG044514	AT2G25000.2	51.724	58	28	0	266	323	104	161	9.53e-16	75.9
MsaG044514	AT2G25000.4	51.724	58	28	0	266	323	104	161	9.53e-16	75.9
MsaG044514	AT2G25000.3	51.724	58	28	0	266	323	126	183	1.75e-15	75.5
MsaG044514	AT5G43290.1	56.140	57	24	1	266	322	115	170	2.14e-15	75.5
MsaG044514	AT2G25000.1	51.724	58	28	0	266	323	147	204	2.22e-15	75.5
MsaG044514	AT2G46130.1	50.000	62	30	1	261	322	26	86	3.02e-15	71.2
MsaG044514	AT1G64000.1	49.180	61	30	1	262	322	111	170	3.56e-15	73.6
MsaG044514	AT2G21900.1	47.297	74	35	2	266	336	110	182	4.57e-15	73.2
MsaG044514	AT3G01080.3	54.839	62	25	3	262	322	201	260	8.27e-15	74.7
MsaG044514	AT5G13080.1	48.387	62	31	1	261	322	63	123	1.38e-14	70.5
MsaG044514	AT4G23810.1	38.583	127	68	4	202	320	91	215	1.27e-13	71.2
MsaG044514	AT1G69810.1	50.000	60	29	1	266	324	204	263	7.72e-13	69.3
MsaG044514	AT1G69810.2	50.000	60	29	1	266	324	146	205	8.88e-13	68.6
MsaG044514	AT4G11070.2	37.288	118	67	3	206	320	53	166	2.54e-12	67.0
MsaG044514	AT4G11070.1	37.288	118	67	3	206	320	85	198	3.22e-12	67.0
MsaG044514	AT1G69310.3	41.463	82	40	3	244	322	123	199	4.35e-12	66.2
MsaG044514	AT4G12020.6	49.123	57	27	2	266	322	469	523	7.86e-12	67.0
MsaG044514	AT4G12020.8	49.123	57	27	2	266	322	469	523	7.86e-12	67.0
MsaG044514	AT4G12020.1	49.123	57	27	2	266	322	469	523	8.24e-12	67.0
MsaG044514	AT4G12020.9	49.123	57	27	2	266	322	469	523	8.24e-12	67.0
MsaG044514	AT4G12020.10	49.123	57	27	2	266	322	469	523	8.51e-12	67.0
MsaG044514	AT4G12020.3	49.123	57	27	2	266	322	469	523	8.52e-12	67.0
MsaG044514	AT4G12020.7	49.123	57	27	2	266	322	469	523	8.54e-12	67.0
MsaG044514	AT4G12020.2	49.123	57	27	2	266	322	469	523	8.76e-12	67.0
MsaG044514	AT4G12020.4	49.123	57	27	2	266	322	469	523	9.24e-12	67.0
MsaG044514	AT4G12020.5	49.123	57	27	2	266	322	402	456	9.80e-12	66.6
MsaG044514	AT4G12020.11	49.123	57	27	2	266	322	469	523	1.17e-11	66.6
MsaG044514	AT5G24110.1	46.032	63	32	1	266	326	114	176	2.06e-11	64.3
MsaG044514	AT2G46130.2	46.774	62	28	2	261	322	26	82	3.67e-11	59.7

Find 66 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATCATTTCTCTTGATTAT+AGG	0.225392	8:+61336744	None:intergenic
CTAAACCAGAAGCTGCTTCT+TGG	0.260761	8:+61337120	None:intergenic
TTCCACCAGATGATTATTCT+TGG	0.275431	8:-61336271	MsaT044514.1:CDS
CAATAACAACAACGCTACTA+TGG	0.291413	8:-61336997	MsaT044514.1:CDS
CTCTCTACATGCTTTCTTGC+TGG	0.296000	8:+61335861	None:intergenic
GCGTTGTTGTTATTGTTGTT+AGG	0.306679	8:+61337005	None:intergenic
GGATGAGGTGAACCTTTAAT+AGG	0.307884	8:+61336230	None:intergenic
GATTATTCTTGGAGAAAATA+TGG	0.308918	8:-61336260	MsaT044514.1:CDS
TATGGTCAGAAACCTATTAA+AGG	0.337402	8:-61336242	MsaT044514.1:CDS
GCTGTCCAAGAAGCAGCTTC+TGG	0.338762	8:-61337125	MsaT044514.1:CDS
TGTGATGGTGGTGGTGGTTG+TGG	0.342656	8:+61336858	None:intergenic
GAAGTGTAGCTCTGAGACTT+TGG	0.346765	8:-61336541	MsaT044514.1:CDS
GGTGGTGGTGGTTGTGGTAA+AGG	0.363573	8:+61336864	None:intergenic
CTGCTTTGGTTGTGAAAGCT+TGG	0.372478	8:+61337156	None:intergenic
CGTTGTTGTTATTGTTGTTA+GGG	0.373125	8:+61337006	None:intergenic
GTTCAGAAGGTTGAACTTGT+AGG	0.380241	8:+61336832	None:intergenic
GCCATCTTCAAGCTAATTGC+AGG	0.382493	8:+61336299	None:intergenic
TAGCTCTGAGACTTTGGGTT+CGG	0.397732	8:-61336535	MsaT044514.1:CDS
CTGTCTCATGTTTCATCTGT+TGG	0.405470	8:-61336597	MsaT044514.1:CDS
AGCTCTGAGACTTTGGGTTC+GGG	0.408914	8:-61336534	MsaT044514.1:CDS
GGTGTAGCGTTGAAAATCAT+TGG	0.411117	8:+61336810	None:intergenic
TGAAATAACACGTTTGAACT+TGG	0.416358	8:+61336932	None:intergenic
AAGTGTAGCTCTGAGACTTT+GGG	0.418573	8:-61336540	MsaT044514.1:CDS
TCTCTTCTTCTTCATTGAAA+AGG	0.427957	8:-61336563	MsaT044514.1:CDS
AGGGTTTGTGATGGTGGTGG+TGG	0.429408	8:+61336852	None:intergenic
GTGATTGTGCTCTCCTTCAT+AGG	0.430732	8:+61335806	None:intergenic
TTATTGTTGTTAGGGTTTGA+AGG	0.452647	8:+61337014	None:intergenic
TTTCTCCAAGAATAATCATC+TGG	0.457317	8:+61336266	None:intergenic
ACTTGTAGGGTTTGTGATGG+TGG	0.459002	8:+61336846	None:intergenic
TTCAGAAGGTTGAACTTGTA+GGG	0.480010	8:+61336833	None:intergenic
TCTTTCATTTCTTCACTCAC+TGG	0.488282	8:-61336681	MsaT044514.1:CDS
GTTAGGGTTTGAAGGTGAAA+AGG	0.489191	8:+61337022	None:intergenic
TGTAGGGTTTGTGATGGTGG+TGG	0.490108	8:+61336849	None:intergenic
TCCTGCAATTAGCTTGAAGA+TGG	0.491700	8:-61336300	MsaT044514.1:CDS
TTGAAAATCATTGGTTCAGA+AGG	0.492153	8:+61336819	None:intergenic
AGGAAGAAGATGAAGAAGGT+TGG	0.495301	8:+61337048	None:intergenic
ACCGTCGATGTCGTCGCCGG+TGG	0.497231	8:-61336640	MsaT044514.1:CDS
ATGCTGGTGGTTACCTATGA+AGG	0.503013	8:-61335819	MsaT044514.1:CDS
TCTTGATGATGCTTCTATGC+TGG	0.510730	8:-61335835	MsaT044514.1:CDS
GTTTGAAGGTGAAAAGGAAG+AGG	0.521249	8:+61337028	None:intergenic
TCTTGATTATAGGACGGTGA+AGG	0.526165	8:+61336754	None:intergenic
TACAAGTGCAGTAGTGTGAG+AGG	0.529683	8:-61335888	MsaT044514.1:CDS
GAAGAGGAAGAAGATGAAGA+AGG	0.545088	8:+61337044	None:intergenic
TGTTGCCACAACAATGGCCG+TGG	0.553102	8:-61337204	None:intergenic
TGAACTTGTAGGGTTTGTGA+TGG	0.556445	8:+61336843	None:intergenic
TAGGAAAATGAGATTGAAGA+GGG	0.558524	8:-61336333	MsaT044514.1:CDS
ATGGCCGTGGAGCTCATGAC+AGG	0.560730	8:-61337191	MsaT044514.1:CDS
CTCCAAGAATAATCATCTGG+TGG	0.566598	8:+61336269	None:intergenic
CATTTCTCTTGATTATAGGA+CGG	0.568226	8:+61336748	None:intergenic
GTAGGAAAATGAGATTGAAG+AGG	0.570122	8:-61336334	MsaT044514.1:CDS
CTTGATTATAGGACGGTGAA+GGG	0.579899	8:+61336755	None:intergenic
TGATGATGCTTCTATGCTGG+TGG	0.581385	8:-61335832	MsaT044514.1:CDS
CCGTCGATGTCGTCGCCGGT+GGG	0.583807	8:-61336639	MsaT044514.1:CDS
AGGGTAGTAGAAACAGTTGG+TGG	0.589506	8:+61336774	None:intergenic
ACAACCGTCGATGTCGTCGC+CGG	0.601308	8:-61336643	MsaT044514.1:CDS
TTAAAGGTTCACCTCATCCA+AGG	0.601665	8:-61336226	MsaT044514.1:intron
ACTTTGGGTTCGGGAAAGTG+TGG	0.607664	8:-61336525	MsaT044514.1:CDS
AATTGAAAGTACCTTGGATG+AGG	0.611960	8:+61336215	None:intergenic
TTCAATGAAGAAGAAGAGAG+TGG	0.633021	8:+61336567	None:intergenic
GTAGCCTGTCATGAGCTCCA+CGG	0.648816	8:+61337187	None:intergenic
AATGAAGAAGAAGAGAGTGG+TGG	0.649002	8:+61336570	None:intergenic
GTTGGTGGAATCTGTTGCAA+AGG	0.653955	8:+61336789	None:intergenic
GTAATCTGAAAAGCACCCAC+CGG	0.654328	8:+61336624	None:intergenic
TGAAGGGTAGTAGAAACAGT+TGG	0.656645	8:+61336771	None:intergenic
CCCACCGGCGACGACATCGA+CGG	0.667804	8:+61336639	None:intergenic
ACAAGTGCAGTAGTGTGAGA+GGG	0.679618	8:-61335887	MsaT044514.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	61335758	61337213	61335758	ID=MsaG044514
Chr8	mRNA	61335758	61337213	61335758	ID=MsaT044514.1;Parent=MsaG044514
Chr8	exon	61335758	61335917	61335758	ID=MsaT044514.1.exon3;Parent=MsaT044514.1
Chr8	CDS	61335758	61335917	61335758	ID=cds.MsaT044514.1;Parent=MsaT044514.1
Chr8	exon	61336227	61336355	61336227	ID=MsaT044514.1.exon2;Parent=MsaT044514.1
Chr8	CDS	61336227	61336355	61336227	ID=cds.MsaT044514.1;Parent=MsaT044514.1
Chr8	exon	61336489	61337213	61336489	ID=MsaT044514.1.exon1;Parent=MsaT044514.1
Chr8	CDS	61336489	61337213	61336489	ID=cds.MsaT044514.1;Parent=MsaT044514.1

Gene Sequence

>MsaT044514.1

ATGGCCGTGGAGCTCATGACAGGCTACAACAGAAACCAAGCTTTCACAACCAAAGCAGAAGAAAATGCTGTCCAAGAAGCAGCTTCTGGTTTAGAAAGTGTTGAAAAACTCATAAAACTTCTCTCAGAAGCACGTCACAAATACCAACCTTCTTCATCTTCTTCCTCTTCCTTTTCACCTTCAAACCCTAACAACAATAACAACAACGCTACTATGGATATAGAAAGAGATTGCAAAGCTGTTGCAGACATAGCTGTTTCCAAGTTCAAACGTGTTATTTCACTGCTTGAAAAAACAAGAACTGGTCATGCTCGTTTCAGAAAAGCACCTTTACCACAACCACCACCACCATCACAAACCCTACAAGTTCAACCTTCTGAACCAATGATTTTCAACGCTACACCTTTGCAACAGATTCCACCAACTGTTTCTACTACCCTTCACCGTCCTATAATCAAGAGAAATGATTCTTCTAAAACTCTTAATTTTTCATACTCTTCTGCTGGTAATTCTTTCATTTCTTCACTCACTGGCGACGACAGCAGCAAACAACCGTCGATGTCGTCGCCGGTGGGTGCTTTTCAGATTACAAATCTGTCTCATGTTTCATCTGTTGGTAAGCCACCACTCTCTTCTTCTTCATTGAAAAGGAAGTGTAGCTCTGAGACTTTGGGTTCGGGAAAGTGTGGTAGTTCTTCTAGCCGTTGTCATTGTTCCAAAAAAAGTAGGAAAATGAGATTGAAGAGGGTTGTTAGAGTTCCTGCAATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCAAGAAAGCATGTAGAGAGAGCTCTTGATGATGCTTCTATGCTGGTGGTTACCTATGAAGGAGAGCACAATCACTCTCTTTCTGCAGCTGATGCTAGCAATCTTATTTTAGAATCATCATAG

Protein sequence

>MsaT044514.1

MAVELMTGYNRNQAFTTKAEENAVQEAASGLESVEKLIKLLSEARHKYQPSSSSSSSFSPSNPNNNNNNATMDIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQPPPPSQTLQVQPSEPMIFNATPLQQIPPTVSTTLHRPIIKRNDSSKTLNFSYSSAGNSFISSLTGDDSSKQPSMSSPVGAFQITNLSHVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADASNLILESS*